repo_id string | cross_repo_split string | commit_index int32 | commit_sha string | in_repo_split string | test_file string | file_split string | split_group string | lineno int32 | col_offset int32 | assertion_type string | test_function string | prefix large_string | target string | assertion_event_type string | assertion_event_id string | assertion_anchor large_string | old_target string | old_lineno int32 | old_col_offset int32 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
zwicker-group/py-pde | train | 237 | 06cb39e79bcb546cce89fc1e5d15313a161775c1 | train | pde/trackers/tests/test_interrupts.py | train | zwicker-group/py-pde:pde/trackers/tests/test_interrupts.py | 41 | 4 | assert | test_interrupt_constant | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde.trackers.interrupts import (
ConstantInterrupts,
FixedInterrupts,
LogarithmicInterrupts,
RealtimeInterrupts,
interval_to_interrupts,
)
def test_interrupt_constant():
"""test the Constant... | pytest.approx(5) | added | d970f68620273b0c8f35f0bec15b20b0174e7e9e77318db734c3cc96dc13fc72 | assert|test_interrupt_constant|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde.trackers.interrupts import ( ConstantInterrupts, FixedInterrupts, LogarithmicInterrupts, RealtimeInterrupts, interval_to_interrupts, ) def test_interrupt_constant(): """test the Const... | null | null | null |
zwicker-group/py-pde | train | 237 | 06cb39e79bcb546cce89fc1e5d15313a161775c1 | train | pde/trackers/tests/test_interrupts.py | train | zwicker-group/py-pde:pde/trackers/tests/test_interrupts.py | 64 | 4 | assert | test_interrupt_logarithmic | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde.trackers.interrupts import (
ConstantInterrupts,
FixedInterrupts,
LogarithmicInterrupts,
RealtimeInterrupts,
interval_to_interrupts,
)
def test_interrupt_constant():
"""test the Constant... | pytest.approx(16) | added | d5f74e2d0e7b550f68e591463762dbae39a70902508c539ae10ee8f7945f7fed | assert|test_interrupt_logarithmic|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde.trackers.interrupts import ( ConstantInterrupts, FixedInterrupts, LogarithmicInterrupts, RealtimeInterrupts, interval_to_interrupts, ) def test_interrupt_constant(): """test the Co... | null | null | null |
zwicker-group/py-pde | train | 237 | 06cb39e79bcb546cce89fc1e5d15313a161775c1 | train | pde/trackers/tests/test_interrupts.py | train | zwicker-group/py-pde:pde/trackers/tests/test_interrupts.py | 71 | 8 | assert | test_interrupt_realtime | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde.trackers.interrupts import (
ConstantInterrupts,
FixedInterrupts,
LogarithmicInterrupts,
RealtimeInterrupts,
interval_to_interrupts,
)
def test_interrupt_constant():
"""test the Constant... | pytest.approx(0) | added | 8b65a5359c0896b94b3f4dbff77cf14d0aed5fd9f47fe3365c406692f3c9e169 | assert|test_interrupt_realtime|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde.trackers.interrupts import ( ConstantInterrupts, FixedInterrupts, LogarithmicInterrupts, RealtimeInterrupts, interval_to_interrupts, ) def test_interrupt_constant(): """test the Const... | null | null | null |
zwicker-group/py-pde | train | 237 | 06cb39e79bcb546cce89fc1e5d15313a161775c1 | train | pde/trackers/tests/test_interrupts.py | train | zwicker-group/py-pde:pde/trackers/tests/test_interrupts.py | 114 | 4 | assert | test_interrupt_fixed | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde.trackers.interrupts import (
ConstantInterrupts,
FixedInterrupts,
LogarithmicInterrupts,
RealtimeInterrupts,
interval_to_interrupts,
)
def test_interrupt_constant():
"""test the Constant... | pytest.approx(1) | added | c4dbf9c90655e6ebbd54a50d530efda0e6255a8a53be19af94164d1d649ae3d0 | assert|test_interrupt_fixed|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde.trackers.interrupts import ( ConstantInterrupts, FixedInterrupts, LogarithmicInterrupts, RealtimeInterrupts, interval_to_interrupts, ) def test_interrupt_constant(): """test the Constant... | null | null | null |
zwicker-group/py-pde | train | 238 | 223c4600647bf3244a73b400c3eee1ea96e0c18f | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 37 | 12 | assert | test_boundaries | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.base import PeriodicityError
from pde.grids.boundaries.axes import BCDataError, Boundaries
from pde.grids.boundaries.axis import BoundaryPair, Boundar... | Boundaries.from_data(g, bx) | added | e063b90e7854ea621b9976a17a0e436b743065b985dd6164df3ea9c31052d56d | assert|test_boundaries|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.base import PeriodicityError from pde.grids.boundaries.axes import BCDataError, Boundaries from pde.grids.boundaries.axis import B... | null | null | null |
zwicker-group/py-pde | train | 238 | 223c4600647bf3244a73b400c3eee1ea96e0c18f | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 61 | 4 | assert | test_boundaries_edge_cases | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.base import PeriodicityError
from pde.grids.boundaries.axes import BCDataError, Boundaries
from pde.grids.boundaries.axis import BoundaryPair, Boundar... | Boundaries([bc0, bcs[1]]) | added | 4116f5a5eeab44229bcb568401640700cdad69c833f5d5bfa25b855f9bae6d4f | assert|test_boundaries_edge_cases|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.base import PeriodicityError from pde.grids.boundaries.axes import BCDataError, Boundaries from pde.grids.boundaries.ax... | null | null | null |
zwicker-group/py-pde | train | 238 | 223c4600647bf3244a73b400c3eee1ea96e0c18f | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 146 | 8 | assert_* | test_set_ghost_cells | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.base import PeriodicityError
from pde.grids.boundaries.axes import BCDataError, Boundaries
from pde.grids.boundaries.axis import BoundaryPair, Boundar... | arr2[tuple(idx)]) | added | 2b51528e272246a865398de2b31ee3e2287cd8c9ec732919fc78f08f33f10fd8 | assert_*|test_set_ghost_cells|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.base import PeriodicityError from pde.grids.boundaries.axes import BCDataError, Boundaries from pde.grids.boundaries.axis i... | null | null | null |
zwicker-group/py-pde | train | 238 | 223c4600647bf3244a73b400c3eee1ea96e0c18f | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 158 | 4 | assert | test_setting_specific_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.base import PeriodicityError
from pde.grids.boundaries.axes import BCDataError, Boundaries
from pde.grids.boundaries.axis import BoundaryPair, Boundar... | '"value"' | added | 785600e5ff36449246eaf2f76aea578ed592c49a5ee040956af107efb8dccbb0 | assert|test_setting_specific_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.base import PeriodicityError from pde.grids.boundaries.axes import BCDataError, Boundaries from pde.grids.boundaries.axi... | null | null | null |
zwicker-group/py-pde | train | 238 | 223c4600647bf3244a73b400c3eee1ea96e0c18f | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 39 | 4 | assert | test_boundary_pair | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | bc1 == bc2 and bc1 is not bc2 | modified | ba05a4c78d703fe495831390ac522e7795ec479bf1de26b5bb11a6c577e5621d | assert|test_boundary_pair|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary conditi... | bc1 == bc2 and bc1 is not bc2 | 37 | 4 |
zwicker-group/py-pde | train | 238 | 223c4600647bf3244a73b400c3eee1ea96e0c18f | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 49 | 4 | assert | test_boundary_pair | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | bc1[0] | modified | b48862cf427a34323dbffba8642121a3ea9076170dc9b6e4fcfe8ec2eb29087d | assert|test_boundary_pair|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary conditi... | bc1[0] | 47 | 4 |
zwicker-group/py-pde | train | 238 | 223c4600647bf3244a73b400c3eee1ea96e0c18f | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 60 | 8 | assert | test_get_axis_boundaries | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | '"' + data + '"' | modified | e533259865d44baf4145bf37fb915018d20ab3670f8e05df496a88a1b4bd6d90 | assert|test_get_axis_boundaries|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary c... | '"' + data + '"' | 58 | 8 |
zwicker-group/py-pde | train | 238 | 223c4600647bf3244a73b400c3eee1ea96e0c18f | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 62 | 8 | assert | test_get_axis_boundaries | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | "field" in b1 and "field" in b2 | modified | d5fd22eb1abfef10aba693148b174ae7b0bea7ed5efc0a10c10f196b63715e50 | assert|test_get_axis_boundaries|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary c... | "field" in b1 and "field" in b2 | 60 | 8 |
zwicker-group/py-pde | train | 239 | ccf202390adc400de03fb873c4a48775ccfb977b | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 214 | 4 | assert_* | test_tensor_div_div | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | expect.data[1:-1]) | added | d466546ad7510e31d87d47bf10eb14c2144f20f5d3617e4163bcabc1954f2158 | assert_*|test_tensor_div_div|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" grid ... | null | null | null |
zwicker-group/py-pde | train | 239 | ccf202390adc400de03fb873c4a48775ccfb977b | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 222 | 4 | assert_* | test_tensor_div_div | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | est.data) | added | 6cf254309d6ada595e49da91e9bdd2a0c6afe8f44a437ec887fc2a75c179c394 | assert_*|test_tensor_div_div|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" grid ... | null | null | null |
zwicker-group/py-pde | train | 240 | de2f5695586b28747c1f26e451973330bdf1c218 | train | pde/grids/operators/tests/test_cylindrical_operators.py | test | zwicker-group/py-pde:pde/grids/operators/tests/test_cylindrical_operators.py | 168 | 4 | assert_* | test_examples_vector_cyl | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
from pde import (
CartesianGrid,
CylindricalSymGrid,
ScalarField,
Tensor2Field,
VectorField,
)
def test_laplacian_field_cyl():
"""test the gradient operator"""
grid = CylindricalSymGrid(2 * np.pi, [0, 2 * ... | expect.data) | modified | 5764391e08857bce62ce7a75e7cab5df0bc5dfda29395a440f89df3230766a05 | assert_*|test_examples_vector_cyl|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np from pde import ( CartesianGrid, CylindricalSymGrid, ScalarField, Tensor2Field, VectorField, ) def test_laplacian_field_cyl(): """test the gradient operator""" grid = CylindricalSymGrid(2 * np.pi, [0, 2 ... | expect.data) | 168 | 4 |
zwicker-group/py-pde | train | 240 | de2f5695586b28747c1f26e451973330bdf1c218 | train | pde/grids/operators/tests/test_cylindrical_operators.py | test | zwicker-group/py-pde:pde/grids/operators/tests/test_cylindrical_operators.py | 182 | 4 | assert_* | test_examples_vector_cyl | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
from pde import (
CartesianGrid,
CylindricalSymGrid,
ScalarField,
Tensor2Field,
VectorField,
)
def test_laplacian_field_cyl():
"""test the gradient operator"""
grid = CylindricalSymGrid(2 * np.pi, [0, 2 * ... | expect.data) | modified | dcd35b013237bbc3c04f3787c7f7901cd4a1258b28850e39a78e62bb32748be9 | assert_*|test_examples_vector_cyl|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np from pde import ( CartesianGrid, CylindricalSymGrid, ScalarField, Tensor2Field, VectorField, ) def test_laplacian_field_cyl(): """test the gradient operator""" grid = CylindricalSymGrid(2 * np.pi, [0, 2 ... | expect.data) | 182 | 4 |
zwicker-group/py-pde | train | 240 | de2f5695586b28747c1f26e451973330bdf1c218 | train | pde/grids/operators/tests/test_cylindrical_operators.py | test | zwicker-group/py-pde:pde/grids/operators/tests/test_cylindrical_operators.py | 193 | 4 | assert_* | test_examples_vector_cyl | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
from pde import (
CartesianGrid,
CylindricalSymGrid,
ScalarField,
Tensor2Field,
VectorField,
)
def test_laplacian_field_cyl():
"""test the gradient operator"""
grid = CylindricalSymGrid(2 * np.pi, [0, 2 * ... | expect.data) | modified | 2e9b171dfc35115355821c7e651ce7ed9dbadc6b20f8a9dd7361947751c46fe7 | assert_*|test_examples_vector_cyl|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np from pde import ( CartesianGrid, CylindricalSymGrid, ScalarField, Tensor2Field, VectorField, ) def test_laplacian_field_cyl(): """test the gradient operator""" grid = CylindricalSymGrid(2 * np.pi, [0, 2 ... | expect.data) | 193 | 4 |
zwicker-group/py-pde | train | 240 | de2f5695586b28747c1f26e451973330bdf1c218 | train | pde/grids/operators/tests/test_polar_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_polar_operators.py | 184 | 4 | assert_* | test_examples_tensor_polar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
PolarSymGrid,
ScalarField,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff():
"""test operator for a simple polar grid"""
grid = Pol... | expect.data) | modified | da5b12dcbed91ea05ae0bacfde17b1b52aeb7272ea9216383f48f65161958a3d | assert_*|test_examples_tensor_polar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, PolarSymGrid, ScalarField, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff(): """test operator for a simple polar grid""" grid = Pol... | expect.data) | 184 | 4 |
zwicker-group/py-pde | train | 240 | de2f5695586b28747c1f26e451973330bdf1c218 | train | pde/grids/operators/tests/test_polar_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_polar_operators.py | 188 | 4 | assert_* | test_examples_tensor_polar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
PolarSymGrid,
ScalarField,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff():
"""test operator for a simple polar grid"""
grid = Pol... | expect.data) | added | 768e2f91b21c94f70928f9d866c422a934e2d08b17eb65fd5c98b43e64df320b | assert_*|test_examples_tensor_polar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, PolarSymGrid, ScalarField, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff(): """test operator for a simple polar grid""" grid = Pol... | null | null | null |
zwicker-group/py-pde | train | 240 | de2f5695586b28747c1f26e451973330bdf1c218 | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 214 | 4 | assert_* | test_tensor_div_div | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | expect.data[1:-1]) | modified | b9eb9292a07eb39044712d4de67e15d5103c3bde9dd8006d187a1037ba53be82 | assert_*|test_tensor_div_div|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" grid ... | expect.data[1:-1]) | 214 | 4 |
zwicker-group/py-pde | train | 240 | de2f5695586b28747c1f26e451973330bdf1c218 | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 222 | 4 | assert_* | test_tensor_div_div | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | est.data) | modified | d2285d3ad691160499bc16a821c5888462d5793a8497c37aa5879e94a59d7b65 | assert_*|test_tensor_div_div|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" grid ... | est.data) | 222 | 4 |
zwicker-group/py-pde | train | 240 | de2f5695586b28747c1f26e451973330bdf1c218 | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 228 | 4 | assert_* | test_tensor_div_div | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | expect.data[1:-1]) | added | b34641a0e19b27a9f86383f4765493b284676a327f9448f3947567af2f9c30f5 | assert_*|test_tensor_div_div|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" grid ... | null | null | null |
zwicker-group/py-pde | train | 241 | 835ff3c7d9dff8b7611cdba8171ba7e1e3fccfe8 | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 214 | 4 | assert_* | test_tensor_div_div_analytical | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | expect.data[1:-1]) | added | d6025f2a6e4988c7f02dbfbb6370943330e0c496504946e0e2f90fcaf03805ff | assert_*|test_tensor_div_div_analytical|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical gr... | null | null | null |
zwicker-group/py-pde | train | 241 | 835ff3c7d9dff8b7611cdba8171ba7e1e3fccfe8 | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 230 | 4 | assert_* | test_tensor_div_div | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | est.data[2:-2]) | modified | bc56519720efaaa05110c77e557d9ab0973ae903d4c77909c6bcd770e80b7b05 | assert_*|test_tensor_div_div|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" grid ... | expect.data[1:-1]) | 228 | 4 |
zwicker-group/py-pde | train | 241 | 835ff3c7d9dff8b7611cdba8171ba7e1e3fccfe8 | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 238 | 4 | assert_* | test_tensor_div_div | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | est.data[2:-2]) | added | 8d88f013af43fc67f90c1085fa1308ccb043dae1cbd67aefc1f1e4d4ef8b5837 | assert_*|test_tensor_div_div|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" grid ... | null | null | null |
zwicker-group/py-pde | train | 242 | b3fc10da3b764c857455cfbf41e22dc48bb9ff1d | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 88 | 4 | assert | test_small_annulus_sph | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | 1e-3 | added | ddda055a4f9b95e10b36a9460f56043e5329c594f2996a35e5992a68d1dd53d1 | assert|test_small_annulus_sph|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" grid... | null | null | null |
zwicker-group/py-pde | train | 242 | b3fc10da3b764c857455cfbf41e22dc48bb9ff1d | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 132 | 4 | assert_* | test_grid_div_grad_sph | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | res.data[1:-1]) | added | a417547e291964b0841c7a58364530065dede32b40d37426e31fa22bcbe91ff1 | assert_*|test_grid_div_grad_sph|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" gr... | null | null | null |
zwicker-group/py-pde | train | 242 | b3fc10da3b764c857455cfbf41e22dc48bb9ff1d | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 158 | 4 | assert_* | test_examples_scalar_sph | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | expect.data) | added | 60746d9f69e57f913831d51416e33efd57d86f9a62c682ff0b696a0b7aa84b72 | assert_*|test_examples_scalar_sph|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" ... | null | null | null |
zwicker-group/py-pde | train | 242 | b3fc10da3b764c857455cfbf41e22dc48bb9ff1d | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 231 | 4 | assert_* | test_tensor_div_div_analytical | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | expect.data[1:-1]) | added | 5891090e8e99073b120e6a61770047fdcd3a7b0cf2f5c14ab8202e86feaae7d4 | assert_*|test_tensor_div_div_analytical|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical gr... | null | null | null |
zwicker-group/py-pde | train | 243 | 4f6b836cb18a2137d562ad8d864aaae786f3fef4 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 83 | 4 | assert | test_collections | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | fields | added | 04b795727e84d340114069240f7940084a13229587eb47c1c984418c90cfa809 | assert|test_collections|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc import ski... | null | null | null |
zwicker-group/py-pde | train | 243 | 4f6b836cb18a2137d562ad8d864aaae786f3fef4 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 163 | 8 | assert_* | test_smoothing_collection | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | fields[i].smooth(sgm).data) | added | f101f7f95ca90834d9e9943261b48d0858f9fa5037a79e9df14630121664f51a | assert_*|test_smoothing_collection|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc... | null | null | null |
zwicker-group/py-pde | train | 243 | 4f6b836cb18a2137d562ad8d864aaae786f3fef4 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 174 | 4 | assert | test_scalar_random_uniform | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | grid | added | c108385048beacad5e29c23494d75e3132be81c5f87f87adf2e5c30ed67bd31a | assert|test_scalar_random_uniform|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc ... | null | null | null |
zwicker-group/py-pde | train | 243 | 4f6b836cb18a2137d562ad8d864aaae786f3fef4 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 217 | 9 | pytest.raises | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | ValueError) | added | a716eb693af65d1ac47446ca2a64b39ff4d97cc30788a48c2c3fe1338d53f70c | pytest.raises|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc im... | null | null | null |
zwicker-group/py-pde | train | 244 | c19edc34ca647d3fa7464d1eeab4c0c077a0d9b6 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 126 | 4 | assert_* | test_callback_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from pde.tools.misc impo... | data_tracker.data) | modified | f59e8b10483da974ed8854e77d12961ae235ce8de7306ef3699d5a18f438a57e | assert_*|test_callback_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid from pde.pdes import AllenCahnPDE, CahnHilliardPDE, Diffusion... | data_tracker.data) | 125 | 4 |
zwicker-group/py-pde | train | 244 | c19edc34ca647d3fa7464d1eeab4c0c077a0d9b6 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 160 | 4 | assert_* | test_data_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from pde.tools.misc impo... | np.arange(11)) | modified | 387292d9a7e7a0fa63cde0dd5e7d18a6fdf210c3baa35d4597413640cd2dec35 | assert_*|test_data_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE ... | np.arange(11)) | 159 | 4 |
zwicker-group/py-pde | train | 244 | c19edc34ca647d3fa7464d1eeab4c0c077a0d9b6 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 226 | 8 | assert | test_get_named_trackers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from pde.tools.misc impo... | isinstance(name, str) | modified | 62aee8791a09185ec8997568195d46a6e6198f798414cf69fcabe30c5c03272f | assert|test_get_named_trackers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid from pde.pdes import AllenCahnPDE, CahnHilliardPDE, Diffusion... | isinstance(name, str) | 225 | 8 |
zwicker-group/py-pde | train | 244 | c19edc34ca647d3fa7464d1eeab4c0c077a0d9b6 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 242 | 4 | assert_* | test_double_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from pde.tools.misc impo... | np.arange(5)) | added | cf7e67de2421f24d3ddb1418f6afafe708b9cdcbd2dc682252556f9096e66f98 | assert_*|test_double_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPD... | null | null | null |
zwicker-group/py-pde | train | 245 | 94c8f5aae6d2b0303f595923fc67b33f99eaabd3 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 228 | 4 | assert | test_inhomogeneous_bcs_1d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_condition_name... | pytest.approx(-1.0) | modified | d402d9764fcc18707644a032300ec557e12d8554facead2e08558d6489ce4233 | assert|test_inhomogeneous_bcs_1d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registered_boundary_con... | pytest.approx(7.0) | 231 | 4 |
zwicker-group/py-pde | train | 245 | 94c8f5aae6d2b0303f595923fc67b33f99eaabd3 | train | pde/grids/operators/tests/test_polar_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_polar_operators.py | 116 | 4 | assert_* | test_grid_div_grad_polar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
PolarSymGrid,
ScalarField,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_polar():
"""test operator for a simple polar grid"""
grid... | res.data[1:-1]) | modified | 120311c5d7727a161cc183b00ae0d51683c2b07b1c51fdda40440ef145e86afe | assert_*|test_grid_div_grad_polar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, PolarSymGrid, ScalarField, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_polar(): """test operator for a simple polar grid""" grid =... | res.data[1:-1]) | 116 | 4 |
zwicker-group/py-pde | train | 245 | 94c8f5aae6d2b0303f595923fc67b33f99eaabd3 | train | pde/grids/tests/test_generic_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_generic_grids.py | 139 | 8 | assert | test_registered_operators | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
import numpy as np
import pytest
from pde import grids
from pde.grids.base import GridBase, discretize_interval, registered_operators
from pde.tools.misc import skipUnlessModule
def iter_grids():
""... | all(op in grid_class_ops for op in ops) | modified | 2c745c3cb60ca9332c916ed973f0ae4cfd78063521e31cdcc944bb335598c1d7 | assert|test_registered_operators|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy import numpy as np import pytest from pde import grids from pde.grids.base import GridBase, discretize_interval, registered_operators from pde.tools.misc import skipUnlessMod... | all(op in grid_class_ops for op in ops) | 139 | 8 |
zwicker-group/py-pde | train | 245 | 94c8f5aae6d2b0303f595923fc67b33f99eaabd3 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 152 | 8 | assert_* | test_noncartesian_grids | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, ScalarField, Tensor2Field
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools import mpi
GRIDS = [
(Uni... | expect.data) | added | 03abfd9e1fd25673fe29b571d623f1b950d1eda77b5dc3b28d833804dfbda930 | assert_*|test_noncartesian_grids|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, ScalarField, Tensor2Field from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids._mesh import GridMesh from pde.tools... | null | null | null |
zwicker-group/py-pde | train | 245 | 94c8f5aae6d2b0303f595923fc67b33f99eaabd3 | train | pde/solvers/tests/test_explicit_mpi_solvers.py | val | zwicker-group/py-pde:pde/solvers/tests/test_explicit_mpi_solvers.py | 72 | 8 | assert_* | test_stochastic_mpi_solvers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, ScalarField, UnitGrid
from pde.solvers import Controller, ExplicitMPISolver
from pde.tools import mpi
@pytest.mark.multiprocessing
@pytest.mark.parametrize(
"scheme, decomposition", [("... | s2.data) | added | 01354760be8a161bff4833b3d7477a3030e0102b550c99985b09572ef5c79e69 | assert_*|test_stochastic_mpi_solvers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, ScalarField, UnitGrid from pde.solvers import Controller, ExplicitMPISolver from pde.tools import mpi @pytest.mark.multiprocessing @pytest.mark.parametrize(... | null | null | null |
zwicker-group/py-pde | train | 245 | 94c8f5aae6d2b0303f595923fc67b33f99eaabd3 | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 168 | 4 | assert | test_adaptive_solver_nan | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver
from pde.tools import mpi
@pytest.mark.multiproc... | info["solver"]["dt_adaptive"] | added | 48647f0d38967a4dfec3a9b9fb6f6930f7583d26272e8f5c08cda925179cd15b | assert|test_adaptive_solver_nan|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver from pde.tools impor... | null | null | null |
zwicker-group/py-pde | train | 245 | 94c8f5aae6d2b0303f595923fc67b33f99eaabd3 | train | pde/tools/tests/test_output.py | train | zwicker-group/py-pde:pde/tools/tests/test_output.py | 19 | 4 | assert | test_in_jupyter_notebook | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
from pde.tools import output
def test_progress_bars():
"""test progress bars"""
pb_cls = output.get_progress_bar_class()
tot = 0
for i in pb_cls(range(4)):
tot += i
assert tot == 6
def test_in_jupyter_notebook():
"""tes... | isinstance(output.in_jupyter_notebook(), bool) | added | 7fc6496e2bfb3af4834e62f4d638d48a0062d17dcc1ee49c5977c60ace1f53af | assert|test_in_jupyter_notebook|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ from pde.tools import output def test_progress_bars(): """test progress bars""" pb_cls = output.get_progress_bar_class() tot = 0 for i in pb_cls(range(4)): tot += i assert tot == 6 def test_in_jupyter_notebook(): """test the... | null | null | null |
zwicker-group/py-pde | train | 245 | 94c8f5aae6d2b0303f595923fc67b33f99eaabd3 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 195 | 4 | assert | test_consistency_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
import numpy as np
import pytest
from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from pde.tools.misc import module_available
from p... | con.info["t_end"] | added | b043f194ad3f20116b18e1639ec841ae37fc8310db91f0bf2141fa3b100b1d90 | assert|test_consistency_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle import numpy as np import pytest from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE from pde.tools.misc i... | null | null | null |
zwicker-group/py-pde | train | 246 | 403da0853bdf2ef9387aebc7a1f18892ef1f1849 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 43 | 4 | assert | test_generic_meshes | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, ScalarField, Tensor2Field
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools import mpi
GRIDS = [
(Uni... | mpi.size | added | 70131516b4246ee8a813b3424b1a9a893691659d192ced40dd3460dd2f1241a8 | assert|test_generic_meshes|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, ScalarField, Tensor2Field from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids._mesh import GridMesh from pde.tools impor... | null | null | null |
zwicker-group/py-pde | train | 246 | 403da0853bdf2ef9387aebc7a1f18892ef1f1849 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 95 | 8 | assert | test_split_fields_mpi | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, ScalarField, Tensor2Field
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools import mpi
GRIDS = [
(Uni... | None | added | 8d3d16f11f58013cd0fb6e271c834ab05a5894abfbc2830d6df10b28a6f9e82e | assert|test_split_fields_mpi|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, ScalarField, Tensor2Field from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids._mesh import GridMesh from pde.tools imp... | null | null | null |
zwicker-group/py-pde | train | 246 | 403da0853bdf2ef9387aebc7a1f18892ef1f1849 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 147 | 4 | assert_* | test_boundary_conditions_numba | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, ScalarField, Tensor2Field
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools import mpi
GRIDS = [
(Uni... | f2._data_full[1:-1, :]) | added | 8262dc1584971aab5e313bc11f30db6767acb3178aa342a1a9d5b335d332ed4b | assert_*|test_boundary_conditions_numba|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, ScalarField, Tensor2Field from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids._mesh import GridMesh from pd... | null | null | null |
zwicker-group/py-pde | train | 246 | 403da0853bdf2ef9387aebc7a1f18892ef1f1849 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 170 | 8 | assert_* | test_noncartesian_grids | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, ScalarField, Tensor2Field
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools import mpi
GRIDS = [
(Uni... | expect.data) | added | 82ba2a6b2431ee08d65e5a5330514569aaa3a185d2b87fa8d0bd470a012328cc | assert_*|test_noncartesian_grids|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, ScalarField, Tensor2Field from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids._mesh import GridMesh from pde.tools... | null | null | null |
zwicker-group/py-pde | train | 246 | 403da0853bdf2ef9387aebc7a1f18892ef1f1849 | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 64 | 12 | assert | test_solvers_simple_adaptive | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver
from pde.tools import mpi
@pytest.mark.multiproc... | 0.03 | modified | 65eec7a3674fef3c861a18b0cd2d9e5871bb77910cd4dc19c6b613a4731654f9 | assert|test_solvers_simple_adaptive|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver from pde.tools i... | 0.03 | 63 | 12 |
zwicker-group/py-pde | train | 246 | 403da0853bdf2ef9387aebc7a1f18892ef1f1849 | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 114 | 4 | assert | test_stochastic_solvers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver
from pde.tools import mpi
@pytest.mark.multiproc... | not solver2.info["dt_adaptive"] | modified | 208d1a41bc80f025b6e0a139a9d0ede946a8f6e685c1fe8c4b5bd1a89851209d | assert|test_stochastic_solvers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver from pde.tools import... | not solver2.info["dt_adaptive"] | 112 | 4 |
zwicker-group/py-pde | train | 246 | 403da0853bdf2ef9387aebc7a1f18892ef1f1849 | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 133 | 9 | pytest.raises | test_unsupported_stochastic_solvers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver
from pde.tools import mpi
@pytest.mark.multiproc... | RuntimeError) | modified | a3bf2410fd4d3eff466ecaae4ba1dd66f2b1bc8ff0f71d528efbf3759bbcb749 | pytest.raises|test_unsupported_stochastic_solvers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver fr... | RuntimeError) | 131 | 9 |
zwicker-group/py-pde | train | 246 | 403da0853bdf2ef9387aebc7a1f18892ef1f1849 | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 170 | 4 | assert | test_adaptive_solver_nan | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver
from pde.tools import mpi
@pytest.mark.multiproc... | info["solver"]["dt_adaptive"] | modified | 254f8b7bf1976eea2d996b69bba95cbbb502edcf10923042e794234283096e31 | assert|test_adaptive_solver_nan|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitMPISolver, ExplicitSolver from pde.tools impor... | info["solver"]["dt_adaptive"] | 168 | 4 |
zwicker-group/py-pde | train | 247 | 61f310bf7b2bb19cc7b169e2b7d1fcb6732b7922 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 102 | 8 | assert | test_individual_boundaries_multidimensional | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, PolarSymGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_... | bc_copy | modified | 60547b681e695b63dc81ef61703d8ff4c4ba2faa88c416ce3e9aec09f1d4e5d0 | assert|test_individual_boundaries_multidimensional|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, PolarSymGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_... | bc_copy | 102 | 8 |
zwicker-group/py-pde | train | 247 | 61f310bf7b2bb19cc7b169e2b7d1fcb6732b7922 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 304 | 4 | assert | test_expression_bc_operator | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, PolarSymGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_... | bc2.get_mathematical_representation("field") | modified | e5f5731f3dc513dbb7f90cd0683d66c58064b12d1409d58e50e5db8802c26c4b | assert|test_expression_bc_operator|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, PolarSymGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registe... | bc2.get_mathematical_representation("field") | 304 | 4 |
zwicker-group/py-pde | train | 247 | 61f310bf7b2bb19cc7b169e2b7d1fcb6732b7922 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 349 | 9 | pytest.raises | test_expression_invalid_args | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, PolarSymGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_... | BCDataError) | modified | 412186f69c4848c5ecbf7213f66713ce053ef4b6b7a98397fec72b63611cf0d1 | pytest.raises|test_expression_invalid_args|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, PolarSymGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes,... | BCDataError) | 349 | 9 |
zwicker-group/py-pde | train | 247 | 61f310bf7b2bb19cc7b169e2b7d1fcb6732b7922 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 373 | 4 | assert | test_getting_registered_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, PolarSymGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_... | isinstance(registered_boundary_condition_names(), dict) | added | a4e9843c2fe1e8894c330deaba401dd4194782ff4fa801ee652893abebf2e8ed | assert|test_getting_registered_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, PolarSymGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registe... | null | null | null |
zwicker-group/py-pde | train | 248 | 44956ae4875ada53f668001d312e3d4daf6f1f4c | train | pde/grids/tests/test_cartesian_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_cartesian_grids.py | 182 | 8 | assert | test_unit_grid_3d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
from functools import partial
import numpy as np
import pytest
from pde import CartesianGrid, UnitGrid
from pde.grids.boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
"""return a random Ca... | np.all(not_too_large) | modified | 47675b7c7460be104ea59379e6b2fd8bcba76aab572c8d7aeeaab45ab85e5eb5 | assert|test_unit_grid_3d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random from functools import partial import numpy as np import pytest from pde import CartesianGrid, UnitGrid from pde.grids.boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """re... | np.all(not_too_large) | 181 | 8 |
zwicker-group/py-pde | train | 248 | 44956ae4875ada53f668001d312e3d4daf6f1f4c | train | pde/grids/tests/test_cartesian_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_cartesian_grids.py | 244 | 4 | assert | test_rect_grid_2d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
from functools import partial
import numpy as np
import pytest
from pde import CartesianGrid, UnitGrid
from pde.grids.boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
"""return a random Ca... | 0.75 | modified | f5127daef38e7ab864b3720c5a017ed6bd6ed7c27bfcb72b7c5bb1cb028c2cda | assert|test_rect_grid_2d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random from functools import partial import numpy as np import pytest from pde import CartesianGrid, UnitGrid from pde.grids.boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """re... | 0.75 | 243 | 4 |
zwicker-group/py-pde | train | 248 | 44956ae4875ada53f668001d312e3d4daf6f1f4c | train | pde/grids/tests/test_cartesian_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_cartesian_grids.py | 314 | 4 | assert | test_conversion_unit_rect_grid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
from functools import partial
import numpy as np
import pytest
from pde import CartesianGrid, UnitGrid
from pde.grids.boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
"""return a random Ca... | g2.shape | modified | eaebe4ce2b77e9c5680cca551e2d3f065a63fbece239e9a09180df519db5991e | assert|test_conversion_unit_rect_grid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random from functools import partial import numpy as np import pytest from pde import CartesianGrid, UnitGrid from pde.grids.boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodic... | g2.shape | 313 | 4 |
zwicker-group/py-pde | train | 248 | 44956ae4875ada53f668001d312e3d4daf6f1f4c | train | pde/grids/tests/test_cartesian_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_cartesian_grids.py | 347 | 9 | pytest.raises | test_setting_domain_rect | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
from functools import partial
import numpy as np
import pytest
from pde import CartesianGrid, UnitGrid
from pde.grids.boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
"""return a random Ca... | ValueError) | modified | f824e9e11f0bd2d7431f50b2302fe4d328721e49f8ad3d387c866616503dd054 | pytest.raises|test_setting_domain_rect|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random from functools import partial import numpy as np import pytest from pde import CartesianGrid, UnitGrid from pde.grids.boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodi... | ValueError) | 346 | 9 |
zwicker-group/py-pde | train | 248 | 44956ae4875ada53f668001d312e3d4daf6f1f4c | train | pde/grids/tests/test_spherical_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical_grids.py | 79 | 4 | assert_* | test_polar_to_cartesian | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, PolarSymGrid, ScalarField, SphericalSymGrid
from pde.grids.boundaries.local import NeumannBC
def test_polar_grid():
"""test simple polar grid"""
grid = PolarSymGrid(4, 8)
asser... | pf_cart2.data) | modified | a61ccad5361505fea1b5d96fb7aff83146dd45a2b0a64ec1230b03944f34f016 | assert_*|test_polar_to_cartesian|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, PolarSymGrid, ScalarField, SphericalSymGrid from pde.grids.boundaries.local import NeumannBC def test_polar_grid(): """test simple polar grid""" grid = PolarSy... | pf_cart2.data) | 77 | 4 |
zwicker-group/py-pde | train | 248 | 44956ae4875ada53f668001d312e3d4daf6f1f4c | train | pde/grids/tests/test_spherical_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical_grids.py | 90 | 4 | assert | test_spherical_grid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, PolarSymGrid, ScalarField, SphericalSymGrid
from pde.grids.boundaries.local import NeumannBC
def test_polar_grid():
"""test simple polar grid"""
grid = PolarSymGrid(4, 8)
asser... | pytest.approx(0.5) | modified | 2b2dd146ba1b9717765bd5eacab4c6d437a6794dc1c9d47f2ac892f5d77b50b1 | assert|test_spherical_grid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, PolarSymGrid, ScalarField, SphericalSymGrid from pde.grids.boundaries.local import NeumannBC def test_polar_grid(): """test simple polar grid""" grid = PolarSymGrid(... | pytest.approx(0.5) | 87 | 4 |
zwicker-group/py-pde | train | 248 | 44956ae4875ada53f668001d312e3d4daf6f1f4c | train | pde/grids/tests/test_spherical_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical_grids.py | 149 | 4 | assert_* | test_spherical_to_cartesian | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, PolarSymGrid, ScalarField, SphericalSymGrid
from pde.grids.boundaries.local import NeumannBC
def test_polar_grid():
"""test simple polar grid"""
grid = PolarSymGrid(4, 8)
asser... | pf_cart2.data) | added | cc6c03dec48581a55c94e2a7c8dec797ef696e8f1d73b9a66fffdc79dd50be15 | assert_*|test_spherical_to_cartesian|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, PolarSymGrid, ScalarField, SphericalSymGrid from pde.grids.boundaries.local import NeumannBC def test_polar_grid(): """test simple polar grid""" grid = Pol... | null | null | null |
zwicker-group/py-pde | train | 248 | 44956ae4875ada53f668001d312e3d4daf6f1f4c | train | pde/grids/tests/test_spherical_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical_grids.py | 159 | 4 | assert | test_setting_boundary_conditions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, PolarSymGrid, ScalarField, SphericalSymGrid
from pde.grids.boundaries.local import NeumannBC
def test_polar_grid():
"""test simple polar grid"""
grid = PolarSymGrid(4, 8)
asser... | b_inner | modified | c5780c94786aebf23afbe69ea67276299f5f4b0153188b7afd1e795f9a9ab42c | assert|test_setting_boundary_conditions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, PolarSymGrid, ScalarField, SphericalSymGrid from pde.grids.boundaries.local import NeumannBC def test_polar_grid(): """test simple polar grid""" grid = ... | b_inner | 157 | 4 |
zwicker-group/py-pde | train | 249 | 6c7d8b60a8d3041c666b71cb2c9bb1106e5d2bfa | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 109 | 12 | assert | test_natural_boundary_conditions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.base import PeriodicityError
from pde.grids.boundaries.axes import BCDataError, Boundaries
from pde.grids.boundaries.axis import BoundaryPair, Boundar... | BoundaryPair.from_data(g, 1, "derivative") | modified | f195a787df0128f8b1b6ab31df1931f7e081b9bc4543762635f4fdf1cfc9b020 | assert|test_natural_boundary_conditions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.base import PeriodicityError from pde.grids.boundaries.axes import BCDataError, Boundaries from pde.grids.boundar... | BoundaryPair.from_data(g, 1, "derivative") | 109 | 12 |
zwicker-group/py-pde | train | 249 | 6c7d8b60a8d3041c666b71cb2c9bb1106e5d2bfa | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 124 | 4 | assert | test_bc_values | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.base import PeriodicityError
from pde.grids.boundaries.axes import BCDataError, Boundaries
from pde.grids.boundaries.axis import BoundaryPair, Boundar... | bc[0].low.value == 2 and bc[0].high.value == 3 | modified | c675df369abce416fd1ceb6909bdeaf7f05c1b5c4e6898314f215bf6ee3b9d6e | assert|test_bc_values|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.base import PeriodicityError from pde.grids.boundaries.axes import BCDataError, Boundaries from pde.grids.boundaries.axis import Bo... | bc[0].low.value == 2 and bc[0].high.value == 3 | 124 | 4 |
zwicker-group/py-pde | train | 249 | 6c7d8b60a8d3041c666b71cb2c9bb1106e5d2bfa | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 146 | 8 | assert_* | test_set_ghost_cells | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.base import PeriodicityError
from pde.grids.boundaries.axes import BCDataError, Boundaries
from pde.grids.boundaries.axis import BoundaryPair, Boundar... | arr2[tuple(idx)]) | modified | f2adf5d7173b56f28839c6fc0bc651db5016c5cc05b4ce0f7e4b23aeca553eb2 | assert_*|test_set_ghost_cells|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.base import PeriodicityError from pde.grids.boundaries.axes import BCDataError, Boundaries from pde.grids.boundaries.axis i... | arr2[tuple(idx)]) | 146 | 8 |
zwicker-group/py-pde | train | 249 | 6c7d8b60a8d3041c666b71cb2c9bb1106e5d2bfa | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 161 | 4 | assert | test_setting_specific_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.base import PeriodicityError
from pde.grids.boundaries.axes import BCDataError, Boundaries
from pde.grids.boundaries.axis import BoundaryPair, Boundar... | '"value"' | modified | 53141fe18e3f44d643fbe649a0ee475473b8618417153656e7c204caeb9884e7 | assert|test_setting_specific_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.base import PeriodicityError from pde.grids.boundaries.axes import BCDataError, Boundaries from pde.grids.boundaries.axi... | '"value"' | 161 | 4 |
zwicker-group/py-pde | train | 249 | 6c7d8b60a8d3041c666b71cb2c9bb1106e5d2bfa | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 201 | 9 | pytest.raises | test_pde_spatial_args | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
from pde.tools import mpi
def iter_grids()... | RuntimeError) | modified | 84b9156c0083b2f5bd78ebb74ed39d1720c501d66938be7ff54483a47b9ff466 | pytest.raises|test_pde_spatial_args|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError from pde.t... | RuntimeError) | 198 | 9 |
zwicker-group/py-pde | train | 249 | 6c7d8b60a8d3041c666b71cb2c9bb1106e5d2bfa | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 224 | 4 | assert | test_pde_complex_serial | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
from pde.tools import mpi
def iter_grids()... | not eq.explicit_time_dependence | modified | de2e9070ed4523e772ae6a0bcb1366e7c009d6e29f2526781185b97acbd17ae1 | assert|test_pde_complex_serial|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError from pde.tools ... | not eq.explicit_time_dependence | 221 | 4 |
zwicker-group/py-pde | train | 249 | 6c7d8b60a8d3041c666b71cb2c9bb1106e5d2bfa | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 370 | 4 | assert_* | test_pde_integral | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
from pde.tools import mpi
def iter_grids()... | -field.integral) | modified | 8434c1f51fcf029ec58e1b4b455a92685f6640258e91a84ef046cd642aced5e9 | assert_*|test_pde_integral|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError from pde.tools impo... | -field.integral) | 367 | 4 |
zwicker-group/py-pde | train | 249 | 6c7d8b60a8d3041c666b71cb2c9bb1106e5d2bfa | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 389 | 32 | pytest.approx | test_anti_periodic_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
from pde.tools import mpi
def iter_grids()... | 0, abs=1e-5) | modified | 205df1f7986904800b700e606bf49416a340eaf259990cb18e588804341cbe29 | pytest.approx|test_anti_periodic_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError from pde.... | 0, abs=1e-5) | 386 | 32 |
zwicker-group/py-pde | train | 250 | 30ef7c57082a1afe13c23bda92731c0735374380 | train | pde/tests/test_integration.py | train | zwicker-group/py-pde:pde/tests/test_integration.py | 89 | 8 | assert | test_custom_pde_mpi | """
Integration tests that use multiple modules together
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, DiffusionPDE, FileStorage, PDEBase, ScalarField, UnitGrid
from pde.tools import misc, mpi, numba
@misc.skipUnlessModule("h5py")
def te... | caplog.text | added | 4d9d69486f3a8ecd63426c7a4e68577547d50f264f4ddedafcd05a515cd16150 | assert|test_custom_pde_mpi|""" Integration tests that use multiple modules together .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, DiffusionPDE, FileStorage, PDEBase, ScalarField, UnitGrid from pde.tools import misc, mpi, numba @misc.skipUnles... | null | null | null |
zwicker-group/py-pde | train | 250 | 30ef7c57082a1afe13c23bda92731c0735374380 | train | pde/tests/test_integration.py | train | zwicker-group/py-pde:pde/tests/test_integration.py | 100 | 8 | assert_* | test_custom_pde_mpi | """
Integration tests that use multiple modules together
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, DiffusionPDE, FileStorage, PDEBase, ScalarField, UnitGrid
from pde.tools import misc, mpi, numba
@misc.skipUnlessModule("h5py")
def te... | expect.data) | added | e7d7578386c77bef3bf0a830dcd82116596bfa94f3fa9442ff97266e1f5cbccb | assert_*|test_custom_pde_mpi|""" Integration tests that use multiple modules together .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, DiffusionPDE, FileStorage, PDEBase, ScalarField, UnitGrid from pde.tools import misc, mpi, numba @misc.skipUnl... | null | null | null |
zwicker-group/py-pde | train | 250 | 30ef7c57082a1afe13c23bda92731c0735374380 | train | pde/tests/test_integration.py | train | zwicker-group/py-pde:pde/tests/test_integration.py | 101 | 8 | assert_* | test_custom_pde_mpi | """
Integration tests that use multiple modules together
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, DiffusionPDE, FileStorage, PDEBase, ScalarField, UnitGrid
from pde.tools import misc, mpi, numba
@misc.skipUnlessModule("h5py")
def te... | expect.data) | added | 2c470b56297a663097075f82e030dd79fa5d4be05a6769f8cff8373331f5d656 | assert_*|test_custom_pde_mpi|""" Integration tests that use multiple modules together .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, DiffusionPDE, FileStorage, PDEBase, ScalarField, UnitGrid from pde.tools import misc, mpi, numba @misc.skipUnl... | null | null | null |
zwicker-group/py-pde | train | 250 | 30ef7c57082a1afe13c23bda92731c0735374380 | train | pde/tests/test_integration.py | train | zwicker-group/py-pde:pde/tests/test_integration.py | 106 | 12 | assert | test_custom_pde_mpi | """
Integration tests that use multiple modules together
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, DiffusionPDE, FileStorage, PDEBase, ScalarField, UnitGrid
from pde.tools import misc, mpi, numba
@misc.skipUnlessModule("h5py")
def te... | info["use_mpi"] | added | 9c8d5656f6269823619cbc689faa3fd167df5a1104778c0c11fcad2f819493ec | assert|test_custom_pde_mpi|""" Integration tests that use multiple modules together .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, DiffusionPDE, FileStorage, PDEBase, ScalarField, UnitGrid from pde.tools import misc, mpi, numba @misc.skipUnles... | null | null | null |
zwicker-group/py-pde | train | 251 | 82829c5df0a7695f283adb068cb0b425d0dc342a | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 501 | 4 | assert_* | test_boundary_expressions_with_t | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | [0, 0, 0]) | added | 1241ab4da6efa5b0fea227b09aba7567e8b2cf6ed447daafd96d8daef15c6328 | assert_*|test_boundary_expressions_with_t|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, Polar... | null | null | null |
zwicker-group/py-pde | train | 251 | 82829c5df0a7695f283adb068cb0b425d0dc342a | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 503 | 4 | assert_* | test_boundary_expressions_with_t | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | [2, 0, 2]) | added | f8043a6c976b4b0704bb941cefb00972a11803c68a9d5c984b55471c3879722b | assert_*|test_boundary_expressions_with_t|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, Polar... | null | null | null |
zwicker-group/py-pde | train | 253 | 49d857daeeea386b1714a0bfbc23394596238503 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 291 | 4 | assert | test_from_data | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | ["a", "b"] | added | e987a6d2d2a21e4e363c6863b78b9623436d43cdcf2fcd55c98640ce7cfc9eed | assert|test_from_data|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc import skipU... | null | null | null |
zwicker-group/py-pde | train | 253 | 49d857daeeea386b1714a0bfbc23394596238503 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 292 | 4 | assert_* | test_from_data | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | f2.data) | added | 0cb904725bb2f450e98c0bade5839ed2ede857f0069ac42c63f2457319f574b0 | assert_*|test_from_data|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc import ski... | null | null | null |
zwicker-group/py-pde | train | 253 | 49d857daeeea386b1714a0bfbc23394596238503 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 301 | 4 | assert | test_from_data | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | ["c", "d"] | added | af3d7b1578138c5a2fcdc51479e410f637ade8e8658918e519195b4c2e4ba485 | assert|test_from_data|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc import skipU... | null | null | null |
zwicker-group/py-pde | train | 253 | 49d857daeeea386b1714a0bfbc23394596238503 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 302 | 4 | assert_* | test_from_data | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | f2.data) | added | a444fcf0967f5b81c92bccbc7b2df893e50d95b3006d158e138a77ec3993910f | assert_*|test_from_data|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc import ski... | null | null | null |
zwicker-group/py-pde | train | 253 | 49d857daeeea386b1714a0bfbc23394596238503 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 58 | 4 | assert | test_split_fields | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools ... | field_comb | modified | 9ea4c852b6926d0c551ef1b5c70a3f97496311b792a9b092dc84fcd992a3496f | assert|test_split_fields|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids._mesh import G... | field_comb | 58 | 4 |
zwicker-group/py-pde | train | 253 | 49d857daeeea386b1714a0bfbc23394596238503 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 175 | 4 | assert_* | test_boundary_conditions_numpy | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools ... | f2._data_full[1:-1, :]) | added | 25dcc88f25798f31ffaafa641dcd9590a54daf0e457855afbfebb87fecf277e9 | assert_*|test_boundary_conditions_numpy|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids... | null | null | null |
zwicker-group/py-pde | train | 253 | 49d857daeeea386b1714a0bfbc23394596238503 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 221 | 8 | assert_* | test_noncartesian_grids | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools ... | expect.data) | added | 976cbff00e025549fc7324d5b309015f79373d44b3f9434e946ab65b05171610 | assert_*|test_noncartesian_grids|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids._mesh ... | null | null | null |
zwicker-group/py-pde | train | 253 | 49d857daeeea386b1714a0bfbc23394596238503 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 244 | 4 | assert | test_integration_parallel | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools ... | rank > 0 or np.isscalar(res) | added | b91c8b30fb3874124e5ad7c1cd8f6ba74e512bdb324a2dc514363f122c16272d | assert|test_integration_parallel|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids._mesh ... | null | null | null |
zwicker-group/py-pde | train | 254 | dfb6f53268b0e24cad5fe661f85fd65e7c26cc3d | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 204 | 4 | assert | test_complex_fields | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | np.dtype("complex") | added | 05b99dd8c0b9dcf1a804ca39a47b8ea0d4eb1ee793b24f1dbdf249cbb23b3004 | assert|test_complex_fields|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixtures import ... | null | null | null |
zwicker-group/py-pde | train | 254 | dfb6f53268b0e24cad5fe661f85fd65e7c26cc3d | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 279 | 4 | assert_* | test_interpolation_values | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | f.data[..., 2, 2]) | added | b51bbec89e584abe89a2e57bcc3a34f8220e498f1a2cfa82ee5ce3966b8cb33c | assert_*|test_interpolation_values|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixtures... | null | null | null |
zwicker-group/py-pde | train | 254 | dfb6f53268b0e24cad5fe661f85fd65e7c26cc3d | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 414 | 41 | pytest.approx | test_random_normal | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | m, rel=0.1, abs=0.1) | added | aaf25f3458e3c60c198e967a36d420c1ec2ca7ddca8186670e4289efaa6d10cb | pytest.approx|test_random_normal|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixtures i... | null | null | null |
zwicker-group/py-pde | train | 254 | dfb6f53268b0e24cad5fe661f85fd65e7c26cc3d | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 505 | 4 | assert | test_smoothing | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | tf.smooth(1).data.shape | added | 767f02378ce0528b313de0813f093b2f6454c769979876600120153e6e8154f7 | assert|test_smoothing|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixtures import iter_... | null | null | null |
zwicker-group/py-pde | train | 254 | dfb6f53268b0e24cad5fe661f85fd65e7c26cc3d | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 343 | 8 | assert_* | test_boundary_interpolation_1d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | bndry_val) | added | 27e6d22b3d403b29b9e8dd8d19b63210bf60158222378bbae227bd33dd5e8fe1 | assert_*|test_boundary_interpolation_1d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSy... | null | null | null |
zwicker-group/py-pde | train | 254 | dfb6f53268b0e24cad5fe661f85fd65e7c26cc3d | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 414 | 4 | assert | test_complex_dtype | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | not f.is_complex | added | 0bec5cdd3a8cc6ff46074e1cb73a67e09a13c4d5cdf0c3593c04fe6d4d5fc962 | assert|test_complex_dtype|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGrid, UnitGri... | null | null | null |
zwicker-group/py-pde | train | 254 | dfb6f53268b0e24cad5fe661f85fd65e7c26cc3d | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 475 | 4 | assert | test_corner_interpolation | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | pytest.approx(0.0) | added | 157348f51b2a793f343d7f21f4f6ae7e184f67fee188d85f0ec2ab8dfdb56ea6 | assert|test_corner_interpolation|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGrid, ... | null | null | null |
zwicker-group/py-pde | train | 254 | dfb6f53268b0e24cad5fe661f85fd65e7c26cc3d | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 502 | 8 | assert | test_generic_derivatives | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | not np.allclose(sf_lap.data, sf_laplace.data) | added | 2692578df6573a48266e46f9f5fff4fd62b2ede0357df56609c3a06bbb15e588 | assert|test_generic_derivatives|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGrid, U... | null | null | null |
zwicker-group/py-pde | train | 255 | 82152f3f8e74fe39abf80fe1854888fda14bf8f0 | train | pde/tools/tests/test_mpi.py | train | zwicker-group/py-pde:pde/tools/tests/test_mpi.py | 33 | 4 | assert | test_allreduce | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde.tools.mpi import mpi_allreduce, mpi_recv, mpi_send, rank, size
@pytest.mark.multiprocessing
def test_send_recv():
"""test basic send and receive"""
if size == 1:
pytest.skip("Run without multipr... | data.sum() | added | 4bb12b72476c9a86da3a8fbc00d7c8b3e2b30f33562be77ec37719ac23ec1bf8 | assert|test_allreduce|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde.tools.mpi import mpi_allreduce, mpi_recv, mpi_send, rank, size @pytest.mark.multiprocessing def test_send_recv(): """test basic send and receive""" if size == 1: pytest.skip("Run without multi... | null | null | null |
zwicker-group/py-pde | train | 255 | 82152f3f8e74fe39abf80fe1854888fda14bf8f0 | train | pde/tools/tests/test_mpi.py | train | zwicker-group/py-pde:pde/tools/tests/test_mpi.py | 36 | 4 | assert | test_allreduce | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde.tools.mpi import mpi_allreduce, mpi_recv, mpi_send, rank, size
@pytest.mark.multiprocessing
def test_send_recv():
"""test basic send and receive"""
if size == 1:
pytest.skip("Run without multipr... | data.max() | added | c7de8d2d0bff9ecc7d5b16cf35e0a13276aaa1145722f14b2b1ec5e49e27be09 | assert|test_allreduce|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde.tools.mpi import mpi_allreduce, mpi_recv, mpi_send, rank, size @pytest.mark.multiprocessing def test_send_recv(): """test basic send and receive""" if size == 1: pytest.skip("Run without multi... | null | null | null |
zwicker-group/py-pde | train | 256 | 3a827d861692cbc7727ff098c81aa0ee49a5a5b6 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 218 | 4 | assert_* | test_vector_boundary_conditions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools ... | f2._data_full[:, 1:-1, :]) | added | b594bd0b87876c46a4daa1e5cae3b4cca03e7fa722433864fc3d518a28587022 | assert_*|test_vector_boundary_conditions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grid... | null | null | null |
zwicker-group/py-pde | train | 256 | 3a827d861692cbc7727ff098c81aa0ee49a5a5b6 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 219 | 4 | assert_* | test_vector_boundary_conditions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools ... | f2._data_full[:, :, 1:-1]) | added | d13818906e9480071d283707c48d1e29ca7d40fb03c32e83564d924c43e6fd77 | assert_*|test_vector_boundary_conditions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grid... | null | null | null |
zwicker-group/py-pde | train | 256 | 3a827d861692cbc7727ff098c81aa0ee49a5a5b6 | train | pde/grids/tests/test_grid_mesh.py | train | zwicker-group/py-pde:pde/grids/tests/test_grid_mesh.py | 241 | 8 | assert_* | test_noncartesian_grids | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid
from pde.grids._mesh import GridMesh
from pde.tools ... | expect.data) | added | e4d50dde704c7e89b52715a87b38e2a921d5af869014707e33db434d4195824f | assert_*|test_noncartesian_grids|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import DiffusionPDE, FieldCollection, ScalarField, Tensor2Field, VectorField from pde.grids import CylindricalSymGrid, PolarSymGrid, SphericalSymGrid, UnitGrid from pde.grids._mesh ... | null | null | null |
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