repo_id string | cross_repo_split string | commit_index int32 | commit_sha string | in_repo_split string | test_file string | file_split string | split_group string | lineno int32 | col_offset int32 | assertion_type string | test_function string | prefix large_string | target string | assertion_event_type string | assertion_event_id string | assertion_anchor large_string | old_target string | old_lineno int32 | old_col_offset int32 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
zwicker-group/py-pde | train | 213 | 728b4ea47ce2ec65a38a79680629f5d3c27c95af | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 272 | 4 | assert_* | test_complex_expression | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.tools.expressions import ScalarExpression, TensorExpression, parse_number
def test_parse_number():
"""test parse_number function"""
... | np.array([1, 1j])) | modified | 72ff8811704e8f13db2f730f8606a169dfa7b8a59dd5393a40e703e4fd929a13 | assert_*|test_complex_expression|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.tools.expressions import ScalarExpression, TensorExpression, parse_number def test_parse_number(): """test pa... | np.array([1, 1j])) | 274 | 4 |
zwicker-group/py-pde | train | 213 | 728b4ea47ce2ec65a38a79680629f5d3c27c95af | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 293 | 4 | assert | test_expression_consts | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.tools.expressions import ScalarExpression, TensorExpression, parse_number
def test_parse_number():
"""test parse_number function"""
... | not expr.depends_on("a") | modified | bc08f9145b6a7eac1aaf8698c896d24fb452d4b3c406ad8fbcf4a7196ab3e4d9 | assert|test_expression_consts|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.tools.expressions import ScalarExpression, TensorExpression, parse_number def test_parse_number(): """test parse... | not expr.depends_on("a") | 295 | 4 |
zwicker-group/py-pde | train | 214 | fea8f6fa4fd426818537dae182340e8971940470 | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 171 | 13 | pytest.raises | test_scalar_arithmetics | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | TypeError) | modified | 97dd349dcec79aca3edface98bb9b97b90bd3f096e69c7251536af98830c27ba | pytest.raises|test_scalar_arithmetics|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixtu... | TypeError) | 171 | 13 |
zwicker-group/py-pde | train | 214 | fea8f6fa4fd426818537dae182340e8971940470 | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 332 | 4 | assert | test_get_cartesian_grid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | grid.volume | modified | 68dbaa98a5d66c2a032b61d072d288e18f6085cbb61c3d1673910f476258886b | assert|test_get_cartesian_grid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixtures imp... | grid.volume | 332 | 4 |
zwicker-group/py-pde | train | 214 | fea8f6fa4fd426818537dae182340e8971940470 | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 497 | 4 | assert | test_vector_from_scalars | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | "test" | modified | c000d80074411cf6acd652c59a88ae777cbdba851e3012d8177997c5292ab510 | assert|test_vector_from_scalars|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixtures im... | "test" | 497 | 4 |
zwicker-group/py-pde | train | 214 | fea8f6fa4fd426818537dae182340e8971940470 | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 545 | 4 | assert | test_get_field_class_by_rank | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | ScalarField | modified | 642f763157c738e5ec23afebff339905779f6488c5d08a87f6382267c7de2232 | assert|test_get_field_class_by_rank|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixture... | ScalarField | 545 | 4 |
zwicker-group/py-pde | train | 214 | fea8f6fa4fd426818537dae182340e8971940470 | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 127 | 4 | assert_* | test_interpolation_to_grid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | sf2.data) | modified | b4143ae89d9e79b1071ca54be7491bfb6add99f808c384fb0f70494a90666863 | assert_*|test_interpolation_to_grid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGri... | sf2.data) | 127 | 4 |
zwicker-group/py-pde | train | 214 | fea8f6fa4fd426818537dae182340e8971940470 | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 197 | 4 | assert_* | test_get_line_data | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | c.get_line_data(extract="cut_x")) | modified | 3ab3c6e33202af91036638f1aeaeb8c1a82ca9bc3a2f353f7c4c8c450188d447 | assert_*|test_get_line_data|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGrid, UnitG... | c.get_line_data(extract="cut_x")) | 197 | 4 |
zwicker-group/py-pde | train | 214 | fea8f6fa4fd426818537dae182340e8971940470 | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 233 | 4 | assert_* | test_to_scalar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | sf.data**2) | modified | 8cc3e034bd4d19635598fceb107e8c503e0f26b65d882a042f87409b125f785d | assert_*|test_to_scalar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid,... | sf.data**2) | 233 | 4 |
zwicker-group/py-pde | train | 214 | fea8f6fa4fd426818537dae182340e8971940470 | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 457 | 4 | assert | test_corner_interpolation | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | pytest.approx(0.0) | modified | 5a75ac14f1b0d8946268d74851dff1e87dc833d25707a04bb19cca2dc6dda891 | assert|test_corner_interpolation|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGrid, ... | pytest.approx(0.0) | 457 | 4 |
zwicker-group/py-pde | train | 215 | d0ca26531459683c2bfcaf460a984b1d6b4c5886 | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 58 | 8 | assert | test_get_axis_boundaries | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | '"' + data + '"' | modified | aebe99bb9881e034b80e8dd288335d432a3ee266065f32c4aed379c6f00b4dc8 | assert|test_get_axis_boundaries|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary c... | '"' + data + '"' | 58 | 8 |
zwicker-group/py-pde | train | 215 | d0ca26531459683c2bfcaf460a984b1d6b4c5886 | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 61 | 12 | assert | test_get_axis_boundaries | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | b.periodic | modified | 65e78b99bd2a9686f9e8102acd34fb29507c2a7f18bb7fba0688fe0b9b191a93 | assert|test_get_axis_boundaries|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary c... | b.periodic | 61 | 12 |
zwicker-group/py-pde | train | 215 | d0ca26531459683c2bfcaf460a984b1d6b4c5886 | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 63 | 12 | assert | test_get_axis_boundaries | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | data == "anti-periodic" | added | 8a2d8f67766be555f1f0bef3d4364237eb5f7192809cea380ad6cf50bddbe20e | assert|test_get_axis_boundaries|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary c... | null | null | null |
zwicker-group/py-pde | train | 215 | d0ca26531459683c2bfcaf460a984b1d6b4c5886 | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 65 | 12 | assert | test_get_axis_boundaries | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | not b.periodic | modified | a89467402e64afb5061202a62a0bd1f80e787bcce82b516701440bccbc99967a | assert|test_get_axis_boundaries|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary c... | not b.periodic | 64 | 12 |
zwicker-group/py-pde | train | 215 | d0ca26531459683c2bfcaf460a984b1d6b4c5886 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 350 | 4 | assert | test_anti_periodic_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | np.allclose(np.abs(res1.data), 1) | added | 474c2f7efa0a2eeef9cfedb3f41f8bccf1480696512ebeb7faa5ab317b9b228c | assert|test_anti_periodic_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grids()... | null | null | null |
zwicker-group/py-pde | train | 215 | d0ca26531459683c2bfcaf460a984b1d6b4c5886 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 351 | 4 | assert | test_anti_periodic_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | pytest.approx(0) | added | 3668ad430c4d8120b4d31a702cf645aca020f49bf08805383cafd9c90130b844 | assert|test_anti_periodic_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grids()... | null | null | null |
zwicker-group/py-pde | train | 215 | d0ca26531459683c2bfcaf460a984b1d6b4c5886 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 356 | 4 | assert | test_anti_periodic_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | np.all(np.abs(res2.data) <= 1) | added | aaf99dfc8af9fc61499b267cab57845ad6380d8a0ce4e8b5088966e456e10e99 | assert|test_anti_periodic_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grids()... | null | null | null |
zwicker-group/py-pde | train | 216 | d1e7a64f041dac8d9b9d09f70efe2eedfa549280 | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 333 | 4 | assert | test_get_cartesian_grid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | grid.volume | modified | eb77f57446026c29bb9f7da01ddbc503df167c73d0253f5f485c035d995c489c | assert|test_get_cartesian_grid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixtures imp... | grid.volume | 334 | 4 |
zwicker-group/py-pde | train | 216 | d1e7a64f041dac8d9b9d09f70efe2eedfa549280 | train | pde/fields/tests/test_generic_fields.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic_fields.py | 472 | 8 | assert_* | test_smoothing | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from pde.fields.base import DataFieldBase, FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.grids... | expected) | modified | 19d962a794a900ac8014b39ebfed68e922faa3bbcb92eb2d24b7c24c40a5a928 | assert_*|test_smoothing|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from pde.fields import FieldCollection, ScalarField, Tensor2Field, VectorField from pde.fields.base import DataFieldBase, FieldBase from pde.fields.tests.fixtures import ite... | expected) | 473 | 8 |
zwicker-group/py-pde | train | 216 | d1e7a64f041dac8d9b9d09f70efe2eedfa549280 | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 118 | 4 | assert_* | test_gradient | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | np.cos(y)) | modified | 409376365becac9ae5a3341e7a627976ed518a3263a6944b776a38e2bf09a677 | assert_*|test_gradient|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, ... | np.cos(y)) | 119 | 4 |
zwicker-group/py-pde | train | 216 | d1e7a64f041dac8d9b9d09f70efe2eedfa549280 | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 126 | 4 | assert_* | test_interpolation_to_grid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | sf2.data) | modified | d7facc54c6bb3dc59a736bbfc2a74a7ce43b91c35801cf4d5fb859371610fde3 | assert_*|test_interpolation_to_grid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGri... | sf2.data) | 127 | 4 |
zwicker-group/py-pde | train | 216 | d1e7a64f041dac8d9b9d09f70efe2eedfa549280 | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 179 | 8 | assert_* | test_insert_polar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | g.data) | modified | e1bc69bdb008b1d03f4a612c70aa62a93ee22b6f7203b3f788f7952a861cf40d | assert_*|test_insert_polar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGrid, UnitGr... | g.data) | 180 | 8 |
zwicker-group/py-pde | train | 216 | d1e7a64f041dac8d9b9d09f70efe2eedfa549280 | train | pde/grids/tests/test_cylindrical_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_cylindrical_grids.py | 26 | 30 | pytest.approx | test_cylindrical_grid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, CylindricalSymGrid, ScalarField
from pde.grids.boundaries.local import NeumannBC
def test_cylindrical_grid():
"""test simple cylindrical grid"""
for periodic in [True, False]:
... | grid.integrate(1)) | modified | ab9870c3e29ce648b9767e890dc48046bb5331abb0fefcf2bac47e31c871eefd | pytest.approx|test_cylindrical_grid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, CylindricalSymGrid, ScalarField from pde.grids.boundaries.local import NeumannBC def test_cylindrical_grid(): """test simple cylindrical grid""" for periodi... | grid.integrate(1)) | 27 | 30 |
zwicker-group/py-pde | train | 216 | d1e7a64f041dac8d9b9d09f70efe2eedfa549280 | train | pde/grids/tests/test_cylindrical_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_cylindrical_grids.py | 52 | 4 | assert_* | test_cylindrical_to_cartesian | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, CylindricalSymGrid, ScalarField
from pde.grids.boundaries.local import NeumannBC
def test_cylindrical_grid():
"""test simple cylindrical grid"""
for periodic in [True, False]:
... | pf_cart2.data) | modified | 97f64df2b899d00f177e3ac032219d080735cf93e77b6bfdc776548e440c9d70 | assert_*|test_cylindrical_to_cartesian|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, CylindricalSymGrid, ScalarField from pde.grids.boundaries.local import NeumannBC def test_cylindrical_grid(): """test simple cylindrical grid""" for peri... | pf_cart2.data) | 53 | 4 |
zwicker-group/py-pde | train | 216 | d1e7a64f041dac8d9b9d09f70efe2eedfa549280 | train | pde/grids/tests/test_cylindrical_grids.py | train | zwicker-group/py-pde:pde/grids/tests/test_cylindrical_grids.py | 90 | 4 | assert | test_setting_boundary_conditions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, CylindricalSymGrid, ScalarField
from pde.grids.boundaries.local import NeumannBC
def test_cylindrical_grid():
"""test simple cylindrical grid"""
for periodic in [True, False]:
... | b_inner | modified | 3cd1687e2280e4bf4098967f167ebf06cafb11e60cf4a115cb6110b8823c1399 | assert|test_setting_boundary_conditions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, CylindricalSymGrid, ScalarField from pde.grids.boundaries.local import NeumannBC def test_cylindrical_grid(): """test simple cylindrical grid""" for per... | b_inner | 91 | 4 |
zwicker-group/py-pde | train | 217 | fbb4c8670141fb7d6e1d9b2f5ba71f780f6bfc51 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 100 | 4 | assert | test_trackers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from pde.tools.misc impo... | data.times | modified | dafeb007ccc3d81f024a6cc25d866d755454e95d672b4fdf67af26395cf84859 | assert|test_trackers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE from p... | data.times | 100 | 4 |
zwicker-group/py-pde | train | 217 | fbb4c8670141fb7d6e1d9b2f5ba71f780f6bfc51 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 125 | 4 | assert_* | test_callback_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from pde.tools.misc impo... | data_tracker.data) | modified | 87b6d4ce64fe4443a12912fa09366efc5cc35c8c23d6f3091fbd2ad75a226708 | assert_*|test_callback_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid from pde.pdes import AllenCahnPDE, CahnHilliardPDE, Diffusion... | data_tracker.data) | 125 | 4 |
zwicker-group/py-pde | train | 217 | fbb4c8670141fb7d6e1d9b2f5ba71f780f6bfc51 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 204 | 4 | assert | test_consistency_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from pde.tools.misc impo... | con.info["t_end"] | modified | ec2a7d8916ed4dc74ccdf2bd5724aa271918ab8cbb492100cbec4a304b49cc47 | assert|test_consistency_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid from pde.pdes import AllenCahnPDE, CahnHilliardPDE, Diffusio... | con.info["t_end"] | 204 | 4 |
zwicker-group/py-pde | train | 217 | fbb4c8670141fb7d6e1d9b2f5ba71f780f6bfc51 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 225 | 8 | assert | test_get_named_trackers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from pde.tools.misc impo... | isinstance(name, str) | modified | c80ada84feba4f4222051b548a4f36f7e0423a427ed10aeb169b262c249acc18 | assert|test_get_named_trackers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from pde import Controller, ExplicitSolver, MemoryStorage, ScalarField, UnitGrid from pde.pdes import AllenCahnPDE, CahnHilliardPDE, Diffusion... | isinstance(name, str) | 225 | 8 |
zwicker-group/py-pde | train | 218 | b06a3cb40ca16006d04390e90cebdaa75219257c | train | pde/fields/tests/test_scalar_fields.py | val | zwicker-group/py-pde:pde/fields/tests/test_scalar_fields.py | 494 | 4 | assert_* | test_piecewise_expressions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import gc
import numpy as np
import pytest
from pde.fields.base import FieldBase
from pde.fields.scalar import ScalarField
from pde.fields.tests.fixtures import iter_grids
from pde.grids import CartesianGrid, PolarSymGrid, UnitGrid, boundaries
from pde.... | field_data) | added | 72451d1398e71852d146a79a1876a903ede738349d098aac0f91711a18265d0d | assert_*|test_piecewise_expressions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import gc import numpy as np import pytest from pde.fields.base import FieldBase from pde.fields.scalar import ScalarField from pde.fields.tests.fixtures import iter_grids from pde.grids import CartesianGrid, PolarSymGri... | null | null | null |
zwicker-group/py-pde | train | 219 | b879552a5cbd4cd0b7614d89283815c8e83e2122 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 350 | 4 | assert | test_anti_periodic_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | np.allclose(np.abs(res1.data), 1) | modified | 7ad9e8ff41f017215ebf610bea4f8426cea45e3cd9c08113e208c2dff062c9a9 | assert|test_anti_periodic_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grids()... | np.allclose(np.abs(res1.data), 1) | 350 | 4 |
zwicker-group/py-pde | train | 219 | b879552a5cbd4cd0b7614d89283815c8e83e2122 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 351 | 4 | assert | test_anti_periodic_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | pytest.approx(0) | modified | e46b16254179fb30834ea134b0ea3e5622cd1cce66335cb41c1bf07f8c35b670 | assert|test_anti_periodic_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grids()... | pytest.approx(0) | 351 | 4 |
zwicker-group/py-pde | train | 219 | b879552a5cbd4cd0b7614d89283815c8e83e2122 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 356 | 4 | assert | test_anti_periodic_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | np.all(np.abs(res2.data) <= 1) | modified | 03db22fe4a5abe2d75e5c9dde95f263c12841b24ad233eaf40f2ccbd5dce0404 | assert|test_anti_periodic_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grids()... | np.all(np.abs(res2.data) <= 1) | 356 | 4 |
zwicker-group/py-pde | train | 220 | c4a76fd482ccfbe9f1930ebf1531fad7bc11b291 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 61 | 12 | assert | test_const | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError
def test_parse_number():
"""test ... | f._sympy_expr | modified | 4b4ee7ed0d5a9d702166b8cf6a56e84370a8c48387ec302d27c7ac08881f8133 | assert|test_const|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError def test_parse_number():... | f._sympy_expr | 60 | 12 |
zwicker-group/py-pde | train | 220 | c4a76fd482ccfbe9f1930ebf1531fad7bc11b291 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 212 | 4 | assert_* | test_tensor_expression | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError
def test_parse_number():
"""test ... | np.array([1, 2])) | modified | 959468c9fe79e0aed4da390350bbf3380f5fb74aa35bbaad6570834de8951157 | assert_*|test_tensor_expression|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError def test_p... | np.array([1, 2])) | 211 | 4 |
zwicker-group/py-pde | train | 220 | c4a76fd482ccfbe9f1930ebf1531fad7bc11b291 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 236 | 4 | assert | test_expression_from_expression | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError
def test_parse_number():
"""test ... | ScalarExpression(expr) | modified | 8760dc4625d06a86bb2e6ee1f01c306a95614500cf475c5a126859ddc2cdd8c9 | assert|test_expression_from_expression|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError def... | ScalarExpression(expr) | 235 | 4 |
zwicker-group/py-pde | train | 220 | c4a76fd482ccfbe9f1930ebf1531fad7bc11b291 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 359 | 9 | pytest.raises | test_evaluate_func_invalid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError
def test_parse_number():
"""test ... | RuntimeError) | added | 1acc3692357c51d57e9c87a7843a70cd86e9bbfed201af9e7e453ff24e2c0cda | pytest.raises|test_evaluate_func_invalid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError d... | null | null | null |
zwicker-group/py-pde | train | 221 | 28f147412031b3c5525e1ccd1c22adc6d2488b9f | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 325 | 4 | assert | test_evaluate_func_scalar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError
def test_parse_number():
"""test ... | "complex" | added | c1efa092bdaf0b39043a646f9094f283d52b8c074f98464a236007c355c6522e | assert|test_evaluate_func_scalar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError def test_... | null | null | null |
zwicker-group/py-pde | train | 221 | 28f147412031b3c5525e1ccd1c22adc6d2488b9f | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 344 | 4 | assert | test_evaluate_func_vector | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError
def test_parse_number():
"""test ... | isinstance(res, Tensor2Field) | added | cd451f700257a91d9ff4a198152743d3e08a74347266b4fbe8e104c039731ac6 | assert|test_evaluate_func_vector|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError def test_... | null | null | null |
zwicker-group/py-pde | train | 221 | 28f147412031b3c5525e1ccd1c22adc6d2488b9f | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 347 | 4 | assert | test_evaluate_func_vector | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError
def test_parse_number():
"""test ... | isinstance(evaluate("gradient(a)", {"a": field}), VectorField) | added | 4d7a66e6fe6a70d0748a453f79411a1b4d539d4bf26dd256044e1a08858dbcda | assert|test_evaluate_func_vector|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError def test_... | null | null | null |
zwicker-group/py-pde | train | 221 | 28f147412031b3c5525e1ccd1c22adc6d2488b9f | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 362 | 9 | pytest.raises | test_evaluate_func_invalid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError
def test_parse_number():
"""test ... | ValueError) | modified | 83a84c4975ef3525a8c3c0bdcfeaf3b91bf3df77f6609bf56a028f03d06b4b64 | pytest.raises|test_evaluate_func_invalid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError d... | RuntimeError) | 359 | 9 |
zwicker-group/py-pde | train | 222 | 9a045faccdb53760d856d91903b984076f8121e3 | train | pde/tools/tests/test_math.py | train | zwicker-group/py-pde:pde/tools/tests/test_math.py | 23 | 4 | assert_* | test_SmoothData1D | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde.tools.math import SmoothData1D
def test_SmoothData1D():
"""test smoothing"""
x = np.random.uniform(0, 1, 128)
xs = np.linspace(0, 1, 16)[1:-1]
s = SmoothData1D(x, np.ones_like(x))
np.testin... | np.sin(xs)) | modified | 08cf0c17806887aeebbea5833e000930aefe25b6d415d12406f21864f3387776 | assert_*|test_SmoothData1D|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde.tools.math import SmoothData1D def test_SmoothData1D(): """test smoothing""" x = np.random.uniform(0, 1, 128) xs = np.linspace(0, 1, 16)[1:-1] s = SmoothData1D(x, np.ones_like(x)) np.test... | np.sin(xs)) | 23 | 4 |
zwicker-group/py-pde | train | 222 | 9a045faccdb53760d856d91903b984076f8121e3 | train | pde/tools/tests/test_math.py | train | zwicker-group/py-pde:pde/tools/tests/test_math.py | 34 | 4 | assert | test_SmoothData1D | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde.tools.math import SmoothData1D
def test_SmoothData1D():
"""test smoothing"""
x = np.random.uniform(0, 1, 128)
xs = np.linspace(0, 1, 16)[1:-1]
s = SmoothData1D(x, np.ones_like(x))
np.testin... | pytest.approx(0.5) | added | 91a81436a994c8957951f6a3c5f093723db2f0e30ed9c2c757b84b18effe19be | assert|test_SmoothData1D|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde.tools.math import SmoothData1D def test_SmoothData1D(): """test smoothing""" x = np.random.uniform(0, 1, 128) xs = np.linspace(0, 1, 16)[1:-1] s = SmoothData1D(x, np.ones_like(x)) np.testin... | null | null | null |
zwicker-group/py-pde | train | 223 | 3694e24f805461b09628d8ecd00b8799514cabed | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 55 | 8 | assert | test_solvers_simple_ode | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitSolver
@pytest.mark.parametrize("scheme", ["euler", "runge... | 20 / dt | modified | 18269633eee2f477b494fdad3247c1b09820eefc9ed754c86407cf44c08f4027 | assert|test_solvers_simple_ode|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitSolver @pytest.mark.parametrize(... | 20 / dt | 54 | 8 |
zwicker-group/py-pde | train | 223 | 3694e24f805461b09628d8ecd00b8799514cabed | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 76 | 4 | assert | test_stochastic_solvers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitSolver
@pytest.mark.parametrize("scheme", ["euler", "runge... | not solver1.info["stochastic"] | modified | b045bcd7ab256f357feae69ae5cf2b74748a46261db178b1e67a13cc35977528 | assert|test_stochastic_solvers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitSolver @pytest.mark.parametrize(... | not solver1.info["stochastic"] | 75 | 4 |
zwicker-group/py-pde | train | 223 | 3694e24f805461b09628d8ecd00b8799514cabed | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 91 | 4 | assert | test_stochastic_adaptive_solver | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitSolver
@pytest.mark.parametrize("scheme", ["euler", "runge... | caplog.text | modified | d2f416eb34fb9a268816f23726d8cedf9bda2848026dbf859e906818e98fb90b | assert|test_stochastic_adaptive_solver|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitSolver @pytest.mark.para... | caplog.text | 90 | 4 |
zwicker-group/py-pde | train | 223 | 3694e24f805461b09628d8ecd00b8799514cabed | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 99 | 9 | pytest.raises | test_unsupported_stochastic_solvers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitSolver
@pytest.mark.parametrize("scheme", ["euler", "runge... | RuntimeError) | modified | 5945a8277d4ec058e3bdd1208a346a4a102fbe490038cc0b5e90c6f7c346c3f5 | pytest.raises|test_unsupported_stochastic_solvers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitSolver @pytes... | RuntimeError) | 98 | 9 |
zwicker-group/py-pde | train | 225 | 3899cba0481657ea7b3d5c05e318d0b851bbe8cd | train | pde/tools/tests/test_numba.py | train | zwicker-group/py-pde:pde/tools/tests/test_numba.py | 12 | 4 | assert | test_environment | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
from pde.tools.numba import Counter, flat_idx, jit_allocate_out, numba_environment
def test_environment():
"""test function signature checks"""
assert | isinstance(numba_environment(), dict) | modified | 0df2b87e69f4f74e222a0fb38b20bbcb129104de42502e7b96602e712baefec0 | assert|test_environment|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np from pde.tools.numba import Counter, flat_idx, jit_allocate_out, numba_environment def test_environment(): """test function signature checks""" assert | isinstance(numba_environment(), dict) | 12 | 4 |
zwicker-group/py-pde | train | 226 | 6917871eb65b0c934d876959cd5bbae9a445a6c8 | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 51 | 4 | assert | test_boundary_specifications | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.boundaries.axes import Boundaries
from pde.grids.boundaries.axis import BoundaryPair, BoundaryPeriodic, get_boundary_axis
def test_boundaries():
... | Boundaries.from_data(g, ["neumann", "dirichlet"]) | modified | 0758fb38adcb341e302ef8bc31ee88ca0f5626fd8746daac23c79dcb32ab7d2a | assert|test_boundary_specifications|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.boundaries.axes import Boundaries from pde.grids.boundaries.axis import BoundaryPair, BoundaryPeriodic, get_boundary_... | Boundaries.from_data(g, ["neumann", "dirichlet"]) | 49 | 4 |
zwicker-group/py-pde | train | 226 | 6917871eb65b0c934d876959cd5bbae9a445a6c8 | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 82 | 12 | assert | test_natural_boundary_conditions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.boundaries.axes import Boundaries
from pde.grids.boundaries.axis import BoundaryPair, BoundaryPeriodic, get_boundary_axis
def test_boundaries():
... | BoundaryPair.from_data(g, 1, "derivative") | modified | 9814b7cf687a766fb062df7da711cf5393bb6ce08efab124301a96a5d3404805 | assert|test_natural_boundary_conditions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.boundaries.axes import Boundaries from pde.grids.boundaries.axis import BoundaryPair, BoundaryPeriodic, get_bound... | BoundaryPair.from_data(g, 1, "derivative") | 80 | 12 |
zwicker-group/py-pde | train | 226 | 6917871eb65b0c934d876959cd5bbae9a445a6c8 | train | pde/grids/boundaries/tests/test_axes_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes_boundaries.py | 119 | 8 | assert_* | test_set_ghost_cells | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from pde import ScalarField, UnitGrid
from pde.grids.boundaries.axes import Boundaries
from pde.grids.boundaries.axis import BoundaryPair, BoundaryPeriodic, get_boundary_axis
def test_boundaries():
... | arr2[tuple(idx)]) | modified | 6b6852bc89054ab39d61a40bfeceaf5ce54861bc284037dbebf03bcab20215bc | assert_*|test_set_ghost_cells|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from pde import ScalarField, UnitGrid from pde.grids.boundaries.axes import Boundaries from pde.grids.boundaries.axis import BoundaryPair, BoundaryPeriodic, get_boundary_axis d... | arr2[tuple(idx)]) | 117 | 8 |
zwicker-group/py-pde | train | 226 | 6917871eb65b0c934d876959cd5bbae9a445a6c8 | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 65 | 12 | assert | test_get_axis_boundaries | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | data == "anti-periodic" | modified | 9506c8d77762e211b593dbc9b5fd86c65bd6feec5d6e815c3b231770abdeae27 | assert|test_get_axis_boundaries|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary c... | data == "anti-periodic" | 63 | 12 |
zwicker-group/py-pde | train | 226 | 6917871eb65b0c934d876959cd5bbae9a445a6c8 | train | pde/grids/boundaries/tests/test_axis_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis_boundaries.py | 67 | 12 | assert | test_get_axis_boundaries | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import pytest
from pde import UnitGrid
from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis
from pde.grids.boundaries.local import BCBase
def test_boundary_pair():
"""test setting boundary conditions for whole axi... | not b.periodic | modified | 7155655a5e9a2c9fc0fd0889303d5cc1e139370003492586ea7f25405b82fcd1 | assert|test_get_axis_boundaries|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import pytest from pde import UnitGrid from pde.grids.boundaries.axis import BoundaryPair, get_boundary_axis from pde.grids.boundaries.local import BCBase def test_boundary_pair(): """test setting boundary c... | not b.periodic | 65 | 12 |
zwicker-group/py-pde | train | 226 | 6917871eb65b0c934d876959cd5bbae9a445a6c8 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 241 | 4 | assert | test_inhomogeneous_bcs_1d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_condition_name... | pytest.approx(-1.0) | modified | cc2d197afe71145d7e99b44e94ced1ca3019b705abaeedd5db66048eda89b537 | assert|test_inhomogeneous_bcs_1d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registered_boundary_con... | pytest.approx(-1.0) | 239 | 4 |
zwicker-group/py-pde | train | 226 | 6917871eb65b0c934d876959cd5bbae9a445a6c8 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 315 | 4 | assert | test_expression_bc_operator | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_condition_name... | bc2.get_mathematical_representation("field") | added | d44199fd0097f942a6f6f3a7261aef42c0d8212a0e567e870d01f303d2ad9954 | assert|test_expression_bc_operator|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registered_boundary_c... | null | null | null |
zwicker-group/py-pde | train | 226 | 6917871eb65b0c934d876959cd5bbae9a445a6c8 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 347 | 4 | assert | test_expression_bc_derivative | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_condition_name... | bc2.get_mathematical_representation("field") | added | 318e6a6fe267f65b37f0f1c889ee9353c4924a8c5a77c115df1e5c49bd8d1ceb | assert|test_expression_bc_derivative|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registered_boundary... | null | null | null |
zwicker-group/py-pde | train | 227 | d9bb4356031346fec0cabd06a07322091ec2e129 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 396 | 4 | assert_* | test_user_bcs_numpy | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_condition_name... | f2._data_full) | added | 8ba9597f0c8f08c7e18a3d994f5ee843a6061a0f345e51ec44269d13bbe06085 | assert_*|test_user_bcs_numpy|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registered_boundary_conditi... | null | null | null |
zwicker-group/py-pde | train | 227 | d9bb4356031346fec0cabd06a07322091ec2e129 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 430 | 4 | assert_* | test_user_bcs_numba | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_condition_name... | f2._data_full) | added | 4165d759877b6da2361529402c56ea6e9161dfed093997d3cd1aa126a75bb7fe | assert_*|test_user_bcs_numba|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registered_boundary_conditi... | null | null | null |
zwicker-group/py-pde | train | 228 | 14eb01d51139009cd018fa59d8f6c20d0f416655 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 396 | 4 | assert_* | test_user_bcs_numpy | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_condition_name... | f2._data_full) | modified | cb9734291a8d860524a8599b8ac40f406baadc1be33e56f1ee0c79c031ce6ef9 | assert_*|test_user_bcs_numpy|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registered_boundary_conditi... | f2._data_full) | 396 | 4 |
zwicker-group/py-pde | train | 228 | 14eb01d51139009cd018fa59d8f6c20d0f416655 | train | pde/grids/boundaries/tests/test_local_boundaries.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local_boundaries.py | 430 | 4 | assert_* | test_user_bcs_numba | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import CartesianGrid, ScalarField, UnitGrid
from pde.grids.boundaries.local import (
BCBase,
BCDataError,
_get_arr_1d,
registered_boundary_condition_classes,
registered_boundary_condition_name... | f2._data_full) | modified | ef9170b6b2fd54bf6589dde1a3ae7140611e8b7029349ddaf2900c21a5f60ccd | assert_*|test_user_bcs_numba|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import CartesianGrid, ScalarField, UnitGrid from pde.grids.boundaries.local import ( BCBase, BCDataError, _get_arr_1d, registered_boundary_condition_classes, registered_boundary_conditi... | f2._data_full) | 430 | 4 |
zwicker-group/py-pde | train | 229 | 5ddfce8c18a65cf8773f2d942fc4ec21f33556f0 | train | pde/tools/tests/test_numba.py | train | zwicker-group/py-pde:pde/tools/tests/test_numba.py | 19 | 4 | assert | test_environment | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numba as nb
import numpy as np
from pde.tools.numba import (
JIT_COUNT,
Counter,
flat_idx,
jit_allocate_out,
numba_environment,
)
def test_environment():
"""test function signature checks"""
assert | isinstance(numba_environment(), dict) | added | 9694c2796c92a1cca44bc34d6ecb54e59a841df44668d88f8b04bdcd0b23e836 | assert|test_environment|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numba as nb import numpy as np from pde.tools.numba import ( JIT_COUNT, Counter, flat_idx, jit_allocate_out, numba_environment, ) def test_environment(): """test function signature checks""" assert | null | null | null |
zwicker-group/py-pde | train | 229 | 5ddfce8c18a65cf8773f2d942fc4ec21f33556f0 | train | pde/tools/tests/test_numba.py | train | zwicker-group/py-pde:pde/tools/tests/test_numba.py | 42 | 8 | assert | test_jit_allocate_out_1arg | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numba as nb
import numpy as np
from pde.tools.numba import (
JIT_COUNT,
Counter,
flat_idx,
jit_allocate_out,
numba_environment,
)
def test_environment():
"""test function signature checks"""
assert isinstance(numba_en... | jit_count | added | 1a71487644d973aeff163dd5c31409084be648e89655a7d8ad50f96f6d9e093e | assert|test_jit_allocate_out_1arg|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numba as nb import numpy as np from pde.tools.numba import ( JIT_COUNT, Counter, flat_idx, jit_allocate_out, numba_environment, ) def test_environment(): """test function signature checks""" assert isinstance(numba_... | null | null | null |
zwicker-group/py-pde | train | 229 | 5ddfce8c18a65cf8773f2d942fc4ec21f33556f0 | train | pde/tools/tests/test_numba.py | train | zwicker-group/py-pde:pde/tools/tests/test_numba.py | 62 | 8 | assert | test_jit_allocate_out_2arg | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numba as nb
import numpy as np
from pde.tools.numba import (
JIT_COUNT,
Counter,
flat_idx,
jit_allocate_out,
numba_environment,
)
def test_environment():
"""test function signature checks"""
assert isinstance(numba_en... | jit_count | added | 5957651d7470d6f5b52f1d013f0a3975e9a8642730120b062a733989322dbe3e | assert|test_jit_allocate_out_2arg|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numba as nb import numpy as np from pde.tools.numba import ( JIT_COUNT, Counter, flat_idx, jit_allocate_out, numba_environment, ) def test_environment(): """test function signature checks""" assert isinstance(numba_... | null | null | null |
zwicker-group/py-pde | train | 229 | 5ddfce8c18a65cf8773f2d942fc4ec21f33556f0 | train | pde/tools/tests/test_numba.py | train | zwicker-group/py-pde:pde/tools/tests/test_numba.py | 64 | 8 | assert | test_jit_allocate_out_2arg | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numba as nb
import numpy as np
from pde.tools.numba import (
JIT_COUNT,
Counter,
flat_idx,
jit_allocate_out,
numba_environment,
)
def test_environment():
"""test function signature checks"""
assert isinstance(numba_en... | jit_count + 2 | added | 123554daa2ad973e95e0d658be75829f05e9f8afa9b89d7219943080f238f735 | assert|test_jit_allocate_out_2arg|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numba as nb import numpy as np from pde.tools.numba import ( JIT_COUNT, Counter, flat_idx, jit_allocate_out, numba_environment, ) def test_environment(): """test function signature checks""" assert isinstance(numba_... | null | null | null |
zwicker-group/py-pde | train | 230 | c3370cafa2b08477ac56da1d50ec945cb6285321 | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 200 | 9 | pytest.raises | test_tensor_sph_edge_case | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | AssertionError) | added | d4a4fec029b00153339e63e39c39fa0db508fea5c658f7cd8d39fda906bcae0e | pytest.raises|test_tensor_sph_edge_case|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical gr... | null | null | null |
zwicker-group/py-pde | train | 231 | e645e8d0baccd0511410471117e006d783389ad7 | train | pde/grids/operators/tests/test_cylindrical_operators.py | test | zwicker-group/py-pde:pde/grids/operators/tests/test_cylindrical_operators.py | 168 | 4 | assert_* | test_examples_vector_cyl | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
from pde import (
CartesianGrid,
CylindricalSymGrid,
ScalarField,
Tensor2Field,
VectorField,
)
def test_laplacian_field_cyl():
"""test the gradient operator"""
grid = CylindricalSymGrid(2 * np.pi, [0, 2 * ... | expect.data) | modified | cf76cd2a5a5dd0976666533172e5226ca198eab6489182f650d45c6592891ff8 | assert_*|test_examples_vector_cyl|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np from pde import ( CartesianGrid, CylindricalSymGrid, ScalarField, Tensor2Field, VectorField, ) def test_laplacian_field_cyl(): """test the gradient operator""" grid = CylindricalSymGrid(2 * np.pi, [0, 2 ... | expect.data) | 168 | 4 |
zwicker-group/py-pde | train | 231 | e645e8d0baccd0511410471117e006d783389ad7 | train | pde/grids/operators/tests/test_cylindrical_operators.py | test | zwicker-group/py-pde:pde/grids/operators/tests/test_cylindrical_operators.py | 182 | 4 | assert_* | test_examples_vector_cyl | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
from pde import (
CartesianGrid,
CylindricalSymGrid,
ScalarField,
Tensor2Field,
VectorField,
)
def test_laplacian_field_cyl():
"""test the gradient operator"""
grid = CylindricalSymGrid(2 * np.pi, [0, 2 * ... | expect.data) | modified | 11b058842b89d302e008cf27fce548b62967511170fe35b30816973dc5ff335d | assert_*|test_examples_vector_cyl|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np from pde import ( CartesianGrid, CylindricalSymGrid, ScalarField, Tensor2Field, VectorField, ) def test_laplacian_field_cyl(): """test the gradient operator""" grid = CylindricalSymGrid(2 * np.pi, [0, 2 ... | expect.data) | 182 | 4 |
zwicker-group/py-pde | train | 231 | e645e8d0baccd0511410471117e006d783389ad7 | train | pde/grids/operators/tests/test_cylindrical_operators.py | test | zwicker-group/py-pde:pde/grids/operators/tests/test_cylindrical_operators.py | 193 | 4 | assert_* | test_examples_vector_cyl | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
from pde import (
CartesianGrid,
CylindricalSymGrid,
ScalarField,
Tensor2Field,
VectorField,
)
def test_laplacian_field_cyl():
"""test the gradient operator"""
grid = CylindricalSymGrid(2 * np.pi, [0, 2 * ... | expect.data) | modified | 5977a6f2f637f01ea9cba545e6e02c5d6d41799eb9e8985b4f808052292863de | assert_*|test_examples_vector_cyl|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np from pde import ( CartesianGrid, CylindricalSymGrid, ScalarField, Tensor2Field, VectorField, ) def test_laplacian_field_cyl(): """test the gradient operator""" grid = CylindricalSymGrid(2 * np.pi, [0, 2 ... | expect.data) | 193 | 4 |
zwicker-group/py-pde | train | 231 | e645e8d0baccd0511410471117e006d783389ad7 | train | pde/grids/operators/tests/test_cylindrical_operators.py | test | zwicker-group/py-pde:pde/grids/operators/tests/test_cylindrical_operators.py | 214 | 4 | assert_* | test_examples_tensor_cyl | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
from pde import (
CartesianGrid,
CylindricalSymGrid,
ScalarField,
Tensor2Field,
VectorField,
)
def test_laplacian_field_cyl():
"""test the gradient operator"""
grid = CylindricalSymGrid(2 * np.pi, [0, 2 * ... | expect.data) | modified | 77b8ea5a4c795c428ec1afd379c5e115915e126400e13a4946f9e2ea0806b02f | assert_*|test_examples_tensor_cyl|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np from pde import ( CartesianGrid, CylindricalSymGrid, ScalarField, Tensor2Field, VectorField, ) def test_laplacian_field_cyl(): """test the gradient operator""" grid = CylindricalSymGrid(2 * np.pi, [0, 2 ... | expect.data) | 214 | 4 |
zwicker-group/py-pde | train | 231 | e645e8d0baccd0511410471117e006d783389ad7 | train | pde/grids/operators/tests/test_polar_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_polar_operators.py | 184 | 4 | assert_* | test_examples_tensor_polar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
PolarSymGrid,
ScalarField,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff():
"""test operator for a simple polar grid"""
grid = Pol... | expect.data) | modified | b51c479818eb81ce5b0579db7dadc73f5830e51073a8f085a6476ae618c2edec | assert_*|test_examples_tensor_polar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, PolarSymGrid, ScalarField, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff(): """test operator for a simple polar grid""" grid = Pol... | expect.data) | 184 | 4 |
zwicker-group/py-pde | train | 231 | e645e8d0baccd0511410471117e006d783389ad7 | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 190 | 4 | assert_* | test_examples_tensor_sph | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | expect.data) | modified | 8936a8cff6f7c4e2752012505ea0317e4f97f75b258b2babac0314971d1822b8 | assert_*|test_examples_tensor_sph|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical grid""" ... | expect.data) | 190 | 4 |
zwicker-group/py-pde | train | 231 | e645e8d0baccd0511410471117e006d783389ad7 | train | pde/grids/operators/tests/test_spherical_operators.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical_operators.py | 200 | 9 | pytest.raises | test_tensor_sph_edge_case | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import (
CartesianGrid,
ScalarField,
SphericalSymGrid,
Tensor2Field,
VectorField,
solve_poisson_equation,
)
def test_findiff_sph():
"""test operator for a simple spherical grid"""
... | AssertionError) | modified | f30636d32077f12d99963916612b25ecd14db905054f5b4f0ecc28fa2a233133 | pytest.raises|test_tensor_sph_edge_case|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import ( CartesianGrid, ScalarField, SphericalSymGrid, Tensor2Field, VectorField, solve_poisson_equation, ) def test_findiff_sph(): """test operator for a simple spherical gr... | AssertionError) | 200 | 9 |
zwicker-group/py-pde | train | 232 | 78d85f4e0ccffcbf955373d0a1ef9a1bd7e439b1 | train | pde/tools/tests/test_parameters.py | train | zwicker-group/py-pde:pde/tools/tests/test_parameters.py | 66 | 9 | pytest.raises | test_parameters | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import logging
import math
import pickle
import numpy as np
import pytest
from pde.tools.parameters import (
DeprecatedParameter,
HideParameter,
Parameter,
Parameterized,
get_all_parameters,
sphinx_display_parame... | KeyError) | modified | d15cc1647b85686fbf8b00d221391579d43876aa5fb92de7f9401dcead1a6ccb | pytest.raises|test_parameters|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import logging import math import pickle import numpy as np import pytest from pde.tools.parameters import ( DeprecatedParameter, HideParameter, Parameter, Parameterized, get_all_parameters, sphinx_display_par... | KeyError) | 65 | 9 |
zwicker-group/py-pde | train | 232 | 78d85f4e0ccffcbf955373d0a1ef9a1bd7e439b1 | train | pde/tools/tests/test_parameters.py | train | zwicker-group/py-pde:pde/tools/tests/test_parameters.py | 76 | 4 | assert | test_parameters | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import logging
import math
import pickle
import numpy as np
import pytest
from pde.tools.parameters import (
DeprecatedParameter,
HideParameter,
Parameter,
Parameterized,
get_all_parameters,
sphinx_display_parame... | {"a", "b", "c"} | modified | c3096d0af1c6414d073c3388df3d6faca0b92df934e2dfd0dd63146df856aabe | assert|test_parameters|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import logging import math import pickle import numpy as np import pytest from pde.tools.parameters import ( DeprecatedParameter, HideParameter, Parameter, Parameterized, get_all_parameters, sphinx_display_parameters... | {"a", "b", "c"} | 75 | 4 |
zwicker-group/py-pde | train | 232 | 78d85f4e0ccffcbf955373d0a1ef9a1bd7e439b1 | train | pde/tools/tests/test_parameters.py | train | zwicker-group/py-pde:pde/tools/tests/test_parameters.py | 150 | 4 | assert | test_hidden_parameter | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import logging
import math
import pickle
import numpy as np
import pytest
from pde.tools.parameters import (
DeprecatedParameter,
HideParameter,
Parameter,
Parameterized,
get_all_parameters,
sphinx_display_parame... | {"a": 1, "b": 3} | modified | d2670f6441beb9e7c1ef25d74b455057a4ba6ebe000c4a1ea311f2974c90407e | assert|test_hidden_parameter|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import logging import math import pickle import numpy as np import pytest from pde.tools.parameters import ( DeprecatedParameter, HideParameter, Parameter, Parameterized, get_all_parameters, sphinx_display_para... | {"a": 1, "b": 3} | 149 | 4 |
zwicker-group/py-pde | train | 232 | 78d85f4e0ccffcbf955373d0a1ef9a1bd7e439b1 | train | pde/tools/tests/test_parameters.py | train | zwicker-group/py-pde:pde/tools/tests/test_parameters.py | 169 | 4 | assert_* | test_convert_default_values | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import logging
import math
import pickle
import numpy as np
import pytest
from pde.tools.parameters import (
DeprecatedParameter,
HideParameter,
Parameter,
Parameterized,
get_all_parameters,
sphinx_display_parame... | np.arange(3)) | modified | 8a829e97330e7694e1c4a3ec70a529ad9e9d0af75eb39915045f7c4789643814 | assert_*|test_convert_default_values|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import logging import math import pickle import numpy as np import pytest from pde.tools.parameters import ( DeprecatedParameter, HideParameter, Parameter, Parameterized, get_all_parameters, sphinx_disp... | np.arange(3)) | 168 | 4 |
zwicker-group/py-pde | train | 233 | ede93ff9dbc74b3b849c08146263453e5d01cca9 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 96 | 4 | assert | test_collections_copy | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | fc2.data | added | 797733e6a162b950d9d51777dac426bc8a4eeebc95ed3116969bbdbc5509e509 | assert|test_collections_copy|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc impor... | null | null | null |
zwicker-group/py-pde | train | 233 | ede93ff9dbc74b3b849c08146263453e5d01cca9 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 149 | 8 | assert_* | test_smoothing_collection | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | fields[i].smooth(sgm).data) | added | f56d4ece2e755bec015ba2642eae0a1a72db8104c8008cd6067c1a32327e90c4 | assert_*|test_smoothing_collection|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc... | null | null | null |
zwicker-group/py-pde | train | 233 | ede93ff9dbc74b3b849c08146263453e5d01cca9 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 174 | 4 | assert | test_from_scalar_expressions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | grid | added | 1dcdd73ddbaadfc7dd942e1462e3ce7631183c1310855e3db48179090a5199d0 | assert|test_from_scalar_expressions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.mis... | null | null | null |
zwicker-group/py-pde | train | 233 | ede93ff9dbc74b3b849c08146263453e5d01cca9 | train | pde/fields/tests/test_field_collections.py | train | zwicker-group/py-pde:pde/fields/tests/test_field_collections.py | 207 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.fields.base import FieldBase
from pde.fields.tests.fixtures import iter_grids
from pde.tools.misc import skipUnlessModule
@pytes... | ["a", "b"] | modified | d850ab7f97c145cabe8fda66b5157ba2a551a64140e4bb265dadec69c4f48c7b | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import FieldCollection, ScalarField, Tensor2Field, UnitGrid, VectorField from pde.fields.base import FieldBase from pde.fields.tests.fixtures import iter_grids from pde.tools.misc import sk... | ["c", "b"] | 204 | 4 |
zwicker-group/py-pde | train | 234 | 5db47e0c609b12d28b1c7ddbea71e813bd16d9d2 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 79 | 4 | assert_* | test_pde_vector | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | res_b.data) | added | e30c6cc2f45122f9b51f5efd1edb3997fc9f0e1925f45c8756e04f770702ec9e | assert_*|test_pde_vector|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grids(): """... | null | null | null |
zwicker-group/py-pde | train | 234 | 5db47e0c609b12d28b1c7ddbea71e813bd16d9d2 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 268 | 4 | assert_* | test_pde_consts | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | field.data) | modified | 4aecd558f662949012fe6bd963e8adce72b2e1fcc21f87e48dbebf85023e4dad | assert_*|test_pde_consts|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grids(): """... | field.data) | 267 | 4 |
zwicker-group/py-pde | train | 234 | 5db47e0c609b12d28b1c7ddbea71e813bd16d9d2 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 306 | 13 | pytest.raises | test_pde_bcs_error | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | BCDataError) | modified | 5acf4eeb22292651111668850581f904f3cb8135763f404bd76fa0ee1522904c | pytest.raises|test_pde_bcs_error|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grid... | BCDataError) | 305 | 13 |
zwicker-group/py-pde | train | 234 | 5db47e0c609b12d28b1c7ddbea71e813bd16d9d2 | train | pde/pdes/tests/test_pde_class.py | train | zwicker-group/py-pde:pde/pdes/tests/test_pde_class.py | 357 | 4 | assert | test_anti_periodic_bcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids
from pde.fields import FieldCollection, ScalarField, VectorField
from pde.grids.boundaries.local import BCDataError
def iter_grids():
"""generate some tes... | np.all(np.abs(res2.data) <= 1) | modified | 8408b70ca9ee7c1c257dd27f0f9716b64a05ae3129df824e7cf15dda3e611302 | assert|test_anti_periodic_bcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, MemoryStorage, SwiftHohenbergPDE, grids from pde.fields import FieldCollection, ScalarField, VectorField from pde.grids.boundaries.local import BCDataError def iter_grids()... | np.all(np.abs(res2.data) <= 1) | 356 | 4 |
zwicker-group/py-pde | train | 234 | 5db47e0c609b12d28b1c7ddbea71e813bd16d9d2 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 82 | 4 | assert | test_const | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError, parse_expr_guarded
def test_parse_nu... | caplog.text | added | 0b157413812145f86be4db6226fd2da6e8ba1d9cb06269e5421e93171c7be3e6 | assert|test_const|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError, parse_expr_guarded def ... | null | null | null |
zwicker-group/py-pde | train | 234 | 5db47e0c609b12d28b1c7ddbea71e813bd16d9d2 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 156 | 4 | assert | test_derivatives | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError, parse_expr_guarded
def test_parse_nu... | not e.constant | added | 19c8fd2aca06279fa5b450ced5c32231dd13e3bd73f5d9abf24853651235b8f2 | assert|test_derivatives|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError, parse_expr_guarde... | null | null | null |
zwicker-group/py-pde | train | 234 | 5db47e0c609b12d28b1c7ddbea71e813bd16d9d2 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 263 | 4 | assert | test_expression_user_funcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError, parse_expr_guarded
def test_parse_nu... | pytest.approx(0) | added | b3b02690f7565b6895793a2e50834409458a848b8d49bc5de66f98dfabe447aa | assert|test_expression_user_funcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError, parse_e... | null | null | null |
zwicker-group/py-pde | train | 234 | 5db47e0c609b12d28b1c7ddbea71e813bd16d9d2 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 277 | 8 | assert | test_complex_expression | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError, parse_expr_guarded
def test_parse_nu... | expr.constant | added | bd1f7cb906599a982baf89a5a61dc6b80b7d9a5b80422644041b059277379b3b | assert|test_complex_expression|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError, parse_expr... | null | null | null |
zwicker-group/py-pde | train | 235 | ecffd5a2d4fbf29b2d9091c5f107cbde54b7fa31 | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 33 | 4 | assert | test_solvers_simple_example | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitSolver
@pytest.mark.parametrize("scheme", ["euler", "runge... | adaptive | added | 5cad386f749984ab7cef4a56691c8298e2876b485a5b097d132aecd0cc255dcf | assert|test_solvers_simple_example|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitSolver @pytest.mark.parametr... | null | null | null |
zwicker-group/py-pde | train | 235 | ecffd5a2d4fbf29b2d9091c5f107cbde54b7fa31 | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 56 | 8 | assert | test_solvers_simple_ode | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitSolver
@pytest.mark.parametrize("scheme", ["euler", "runge... | 20 / dt | modified | c0ca2089af6c8d132581e1b48c218cac8f35595117286dad8faa6085f283fd55 | assert|test_solvers_simple_ode|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitSolver @pytest.mark.parametrize(... | 20 / dt | 55 | 8 |
zwicker-group/py-pde | train | 235 | ecffd5a2d4fbf29b2d9091c5f107cbde54b7fa31 | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 106 | 9 | pytest.raises | test_unsupported_stochastic_solvers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitSolver
@pytest.mark.parametrize("scheme", ["euler", "runge... | RuntimeError) | added | 3828a5a7815d8cad08638dbc0ad6a742a0ae7e76548287ee4aaa2ad11923b5fe | pytest.raises|test_unsupported_stochastic_solvers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitSolver @pytes... | null | null | null |
zwicker-group/py-pde | train | 235 | ecffd5a2d4fbf29b2d9091c5f107cbde54b7fa31 | train | pde/solvers/tests/test_explicit_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_explicit_solvers.py | 144 | 4 | assert | test_adaptive_solver_nan | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid
from pde.pdes import PDEBase
from pde.solvers import Controller, ExplicitSolver
@pytest.mark.parametrize("scheme", ["euler", "runge... | info["solver"]["dt_adaptive"] | added | 91feee94c13571b1c948d5f84ee02dde27012924e71b570cb7482ee37d780b16 | assert|test_adaptive_solver_nan|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numpy as np import pytest from pde import PDE, DiffusionPDE, MemoryStorage, ScalarField, UnitGrid from pde.pdes import PDEBase from pde.solvers import Controller, ExplicitSolver @pytest.mark.parametrize... | null | null | null |
zwicker-group/py-pde | train | 235 | ecffd5a2d4fbf29b2d9091c5f107cbde54b7fa31 | train | pde/solvers/tests/test_generic_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_generic_solvers.py | 22 | 4 | assert | test_solver_registration | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, FieldCollection, ScalarField, UnitGrid
from pde.solvers import (
Controller,
ExplicitSolver,
ImplicitSolver,
ScipySolver,
registered_solvers,
)
def test_solver_regi... | solvers | added | f70b872d2caaee73d3d5fec9d51308622d2961c66f1d5076e1a5b7fe1ddd7269 | assert|test_solver_registration|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, DiffusionPDE, FieldCollection, ScalarField, UnitGrid from pde.solvers import ( Controller, ExplicitSolver, ImplicitSolver, ScipySolver, registered_solvers, ) def test_sol... | null | null | null |
zwicker-group/py-pde | train | 235 | ecffd5a2d4fbf29b2d9091c5f107cbde54b7fa31 | train | pde/solvers/tests/test_generic_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_generic_solvers.py | 23 | 4 | assert | test_solver_registration | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, FieldCollection, ScalarField, UnitGrid
from pde.solvers import (
Controller,
ExplicitSolver,
ImplicitSolver,
ScipySolver,
registered_solvers,
)
def test_solver_regi... | solvers | modified | 94f4060cc2dfc6249334c57ab50d582124a8cc19f85f266432ec2e2af6b2dc2c | assert|test_solver_registration|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, DiffusionPDE, FieldCollection, ScalarField, UnitGrid from pde.solvers import ( Controller, ExplicitSolver, ImplicitSolver, ScipySolver, registered_solvers, ) def test_sol... | solvers | 22 | 4 |
zwicker-group/py-pde | train | 235 | ecffd5a2d4fbf29b2d9091c5f107cbde54b7fa31 | train | pde/solvers/tests/test_generic_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_generic_solvers.py | 47 | 4 | assert_* | test_compare_solvers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, FieldCollection, ScalarField, UnitGrid
from pde.solvers import (
Controller,
ExplicitSolver,
ImplicitSolver,
ScipySolver,
registered_solvers,
)
def test_solver_regi... | s2.data) | modified | 0d5128e9b82b6fe3a3d4349a99aa1200d5c4fef680cde95bcd57ef2afd8d5a59 | assert_*|test_compare_solvers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, DiffusionPDE, FieldCollection, ScalarField, UnitGrid from pde.solvers import ( Controller, ExplicitSolver, ImplicitSolver, ScipySolver, registered_solvers, ) def test_solve... | s2.data) | 46 | 4 |
zwicker-group/py-pde | train | 235 | ecffd5a2d4fbf29b2d9091c5f107cbde54b7fa31 | train | pde/solvers/tests/test_generic_solvers.py | train | zwicker-group/py-pde:pde/solvers/tests/test_generic_solvers.py | 55 | 4 | assert | test_solvers_complex | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from pde import PDE, DiffusionPDE, FieldCollection, ScalarField, UnitGrid
from pde.solvers import (
Controller,
ExplicitSolver,
ImplicitSolver,
ScipySolver,
registered_solvers,
)
def test_solver_regi... | c.is_complex | modified | 891522d919c35c0630ee2e8c184985cf05211907c48ab4c1f441f13d27e4283a | assert|test_solvers_complex|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from pde import PDE, DiffusionPDE, FieldCollection, ScalarField, UnitGrid from pde.solvers import ( Controller, ExplicitSolver, ImplicitSolver, ScipySolver, registered_solvers, ) def test_solver_... | c.is_complex | 54 | 4 |
zwicker-group/py-pde | train | 236 | fb504c8cf699199292375078515ff32a271edec5 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 344 | 4 | assert | test_evaluate_func_scalar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError, parse_expr_guarded
def test_parse_nu... | "float" | added | 1c3fce2ba814636f41f48d1078a422fb2737cfa2dc302994ed9c4d7486833375 | assert|test_evaluate_func_scalar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError, parse_ex... | null | null | null |
zwicker-group/py-pde | train | 236 | fb504c8cf699199292375078515ff32a271edec5 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 359 | 4 | assert | test_evaluate_func_vector | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError, parse_expr_guarded
def test_parse_nu... | isinstance(res, Tensor2Field) | modified | 55b4bae069809f3e75636812d557d94b6e10cb644de1191ad98b1541d439a1cb | assert|test_evaluate_func_vector|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError, parse_ex... | isinstance(evaluate("gradient(a)", {"a": field}), VectorField) | 357 | 4 |
zwicker-group/py-pde | train | 236 | fb504c8cf699199292375078515ff32a271edec5 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 370 | 9 | pytest.raises | test_evaluate_func_invalid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError, parse_expr_guarded
def test_parse_nu... | ValueError) | modified | 64539e322585d67b00cb50d09c5273972e1b1db6413b09e9fcc4922db5b58280 | pytest.raises|test_evaluate_func_invalid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError, ... | ValueError) | 368 | 9 |
zwicker-group/py-pde | train | 236 | fb504c8cf699199292375078515ff32a271edec5 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 373 | 9 | pytest.raises | test_evaluate_func_invalid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import logging
import numba as nb
import numpy as np
import pytest
from pde import ScalarField, Tensor2Field, UnitGrid, VectorField
from pde.tools.expressions import *
from pde.tools.expressions import BCDataError, parse_expr_guarded
def test_parse_nu... | ValueError) | modified | 895528ce434d5718b43410dcd987aacfe963337a43ec6647af136d3eccb4495e | pytest.raises|test_evaluate_func_invalid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import logging import numba as nb import numpy as np import pytest from pde import ScalarField, Tensor2Field, UnitGrid, VectorField from pde.tools.expressions import * from pde.tools.expressions import BCDataError, ... | ValueError) | 372 | 9 |
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