repo_id string | cross_repo_split string | commit_index int32 | commit_sha string | in_repo_split string | test_file string | file_split string | split_group string | lineno int32 | col_offset int32 | assertion_type string | test_function string | prefix large_string | target string | assertion_event_type string | assertion_event_id string | assertion_anchor large_string | old_target string | old_lineno int32 | old_col_offset int32 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
zwicker-group/py-pde | train | 117 | f6101a08b326ecdad355b3878b8aec4807d8373b | train | pde/tools/tests/test_cache.py | train | zwicker-group/py-pde:pde/tools/tests/test_cache.py | 230 | 9 | pytest.raises | _test_SerializedDict | """
.. codeauthor:: David Zwicker <dzwicker@seas.harvard.edu>
"""
from __future__ import division
import collections
import copy
import sys
import numpy as np
import pytest
from .. import cache
def deep_getsizeof(obj, ids=None):
"""Find the memory footprint of a Python object
This is a recursive function... | KeyError) | modified | cc548bdeaa098c687c52032eecb70277b5c15fc18fdee368ba96b7446b203e4e | pytest.raises|_test_SerializedDict|""" .. codeauthor:: David Zwicker <dzwicker@seas.harvard.edu> """ from __future__ import division import collections import copy import sys import numpy as np import pytest from .. import cache def deep_getsizeof(obj, ids=None): """Find the memory footprint of a Python object This is ... | KeyError) | 230 | 9 |
zwicker-group/py-pde | train | 117 | f6101a08b326ecdad355b3878b8aec4807d8373b | train | pde/tools/tests/test_spectral.py | train | zwicker-group/py-pde:pde/tools/tests/test_spectral.py | 47 | 8 | assert | test_colored_noise | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import fftpack, stats
from ...grids import CartesianGrid, UnitGrid
from ..spectral import make_colored_noise
def spectral_density(data, dx=1.0):
"""calculate the power spectral density of a field
Arg... | 2e-5 | modified | 2fb9584a6d979484fbec415395aa258cfa76b3fc5e4503493fcda5dc124b670f | assert|test_colored_noise|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import fftpack, stats from ...grids import CartesianGrid, UnitGrid from ..spectral import make_colored_noise def spectral_density(data, dx=1.0): """calculate the power spectral density o... | 2e-5 | 47 | 8 |
zwicker-group/py-pde | train | 117 | f6101a08b326ecdad355b3878b8aec4807d8373b | train | pde/tools/tests/test_spectral.py | train | zwicker-group/py-pde:pde/tools/tests/test_spectral.py | 77 | 12 | assert | test_noise_scaling | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import fftpack, stats
from ...grids import CartesianGrid, UnitGrid
from ..spectral import make_colored_noise
def spectral_density(data, dx=1.0):
"""calculate the power spectral density of a field
Arg... | pytest.approx(0) | modified | 4d4a26957ba50ac158d34ae897e1b098930ea0db56c53c4c1fb6e58ccc75756f | assert|test_noise_scaling|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import fftpack, stats from ...grids import CartesianGrid, UnitGrid from ..spectral import make_colored_noise def spectral_density(data, dx=1.0): """calculate the power spectral density o... | pytest.approx(0) | 77 | 12 |
zwicker-group/py-pde | train | 117 | f6101a08b326ecdad355b3878b8aec4807d8373b | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 208 | 4 | assert | test_consistency_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from ...solvers import Controller, Explici... | con.info["t_end"] | modified | 34ebe318e9e2e80991723133b2d0108c59396cdd630014648f807ce3c35d1771 | assert|test_consistency_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE from ...solve... | con.info["t_end"] | 208 | 4 |
zwicker-group/py-pde | train | 118 | 3477a428b8057a27bcce68ae709d326af05c76ca | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 214 | 4 | assert_* | test_rect_grid_1d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
import numpy as np
import pytest
from .. import CartesianGrid, UnitGrid
from ..boundaries import Boundaries, DomainError, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a random Cartesian grid of given dim... | -16 + 1e-10) | modified | 5f5d2c53dc5c2ca6631e48e2a5d83baeb917458bf762319744a04f6ab0fa9ebf | assert_*|test_rect_grid_1d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random import numpy as np import pytest from .. import CartesianGrid, UnitGrid from ..boundaries import Boundaries, DomainError, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """ return a random Cartesian... | -16 + 1e-10) | 213 | 4 |
zwicker-group/py-pde | train | 118 | 3477a428b8057a27bcce68ae709d326af05c76ca | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 320 | 4 | assert | test_conversion_unit_rect_grid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
import numpy as np
import pytest
from .. import CartesianGrid, UnitGrid
from ..boundaries import Boundaries, DomainError, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a random Cartesian grid of given dim... | g2.cuboid | modified | 486bd516557b4741bf29af3497a6c6fbb89a242d7025837b9b0a8cddd83c0d37 | assert|test_conversion_unit_rect_grid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random import numpy as np import pytest from .. import CartesianGrid, UnitGrid from ..boundaries import Boundaries, DomainError, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """ return a rando... | g2.cuboid | 322 | 4 |
zwicker-group/py-pde | train | 118 | 3477a428b8057a27bcce68ae709d326af05c76ca | train | pde/grids/tests/test_cylindrical.py | train | zwicker-group/py-pde:pde/grids/tests/test_cylindrical.py | 66 | 9 | pytest.raises | test_setting_domain_cylindrical | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from .. import CylindricalGrid
from ..boundaries.local import NeumannBC
def test_cylindrical_grid():
""" test simple cylindrical grid """
for periodic in [True, False]:
grid = CylindricalGrid(4, (-1, 2),... | ValueError) | modified | 61bb2497606b20e8f22b484e5c130041c3f283ebbfa6e7b2bacf5c10e505171a | pytest.raises|test_setting_domain_cylindrical|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from .. import CylindricalGrid from ..boundaries.local import NeumannBC def test_cylindrical_grid(): """ test simple cylindrical grid """ for periodic in [True, False]: grid = C... | ValueError) | 65 | 9 |
zwicker-group/py-pde | train | 118 | 3477a428b8057a27bcce68ae709d326af05c76ca | train | pde/grids/tests/test_cylindrical.py | train | zwicker-group/py-pde:pde/grids/tests/test_cylindrical.py | 96 | 4 | assert | test_setting_boundary_conditions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from .. import CylindricalGrid
from ..boundaries.local import NeumannBC
def test_cylindrical_grid():
""" test simple cylindrical grid """
for periodic in [True, False]:
grid = CylindricalGrid(4, (-1, 2),... | b_inner | modified | bca3664a2685ec49c96c8498814c6c2078a6fbc9e950261ebbcee99c67a3d429 | assert|test_setting_boundary_conditions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from .. import CylindricalGrid from ..boundaries.local import NeumannBC def test_cylindrical_grid(): """ test simple cylindrical grid """ for periodic in [True, False]: grid = Cylindr... | b_inner | 95 | 4 |
zwicker-group/py-pde | train | 118 | 3477a428b8057a27bcce68ae709d326af05c76ca | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 97 | 46 | pytest.approx | test_integration | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
import numpy as np
import pytest
from ... import grids
from ...tools.misc import skipUnlessModule
from ..base import GridBase, discretize_interval
def iter_grids():
""" generate some test grids """
... | grid.integrate(arr)) | added | 7b9a633aa20ffbbed0cd7210173f3a3510f859d038ac9400d46b06bc245b52d1 | pytest.approx|test_integration|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy import numpy as np import pytest from ... import grids from ...tools.misc import skipUnlessModule from ..base import GridBase, discretize_interval def iter_grids(): """ generat... | null | null | null |
zwicker-group/py-pde | train | 118 | 3477a428b8057a27bcce68ae709d326af05c76ca | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 121 | 13 | pytest.raises | test_operators | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
import numpy as np
import pytest
from ... import grids
from ...tools.misc import skipUnlessModule
from ..base import GridBase, discretize_interval
def iter_grids():
""" generate some test grids """
... | ValueError) | added | f8721cc6779114dcf79496d8af2156d7d4ee320dfae37f25e9c958803a017e15 | pytest.raises|test_operators|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy import numpy as np import pytest from ... import grids from ...tools.misc import skipUnlessModule from ..base import GridBase, discretize_interval def iter_grids(): """ generate ... | null | null | null |
zwicker-group/py-pde | train | 118 | 3477a428b8057a27bcce68ae709d326af05c76ca | train | pde/grids/tests/test_spherical.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical.py | 148 | 4 | assert | test_spherical_annulus | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from .. import PolarGrid, SphericalGrid
from ..boundaries.local import NeumannBC
@pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid])
def test_spherical_base_bcs(grid_class):
""" test setting boundary ... | pytest.approx(grid.integrate(1)) | modified | 0fc97b04079cec2a2675661d6a72d8a1bfdb45bffbf1018d992efee39a0ef635 | assert|test_spherical_annulus|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from .. import PolarGrid, SphericalGrid from ..boundaries.local import NeumannBC @pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid]) def test_spherical_base_bcs(grid_class): """ ... | (2, 4) | 145 | 4 |
zwicker-group/py-pde | train | 118 | 3477a428b8057a27bcce68ae709d326af05c76ca | train | pde/grids/tests/test_spherical.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical.py | 184 | 4 | assert_* | test_spherical_to_cartesian | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from .. import PolarGrid, SphericalGrid
from ..boundaries.local import NeumannBC
@pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid])
def test_spherical_base_bcs(grid_class):
""" test setting boundary ... | pf_cart2.data) | added | 082a8732bc5fd78563f68bd6dd9b35d2690d86eb94945e1e59c9898f7de544ec | assert_*|test_spherical_to_cartesian|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from .. import PolarGrid, SphericalGrid from ..boundaries.local import NeumannBC @pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid]) def test_spherical_base_bcs(grid_class... | null | null | null |
zwicker-group/py-pde | train | 119 | 4362b9955f2f1d8bb5fee42d1da32c512451a74f | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 99 | 8 | assert | test_integration | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
import numpy as np
import pytest
from ... import grids
from ...tools.misc import skipUnlessModule
from ..base import GridBase, discretize_interval
def iter_grids():
""" generate some test grids """
... | pytest.approx(grid.integrate(arr)) | modified | 0629d328eb3935ccd16dfe9ea0dd00f7fedb9c73d8fed0edadbd1c050f4341a2 | assert|test_integration|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy import numpy as np import pytest from ... import grids from ...tools.misc import skipUnlessModule from ..base import GridBase, discretize_interval def iter_grids(): """ generate some ... | pytest.approx(grid.integrate(arr)) | 97 | 8 |
zwicker-group/py-pde | train | 119 | 4362b9955f2f1d8bb5fee42d1da32c512451a74f | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 108 | 9 | pytest.raises | test_grid_plotting | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
import numpy as np
import pytest
from ... import grids
from ...tools.misc import skipUnlessModule
from ..base import GridBase, discretize_interval
def iter_grids():
""" generate some test grids """
... | NotImplementedError) | modified | bc66843bc27707b50f2cc555ab844a278b0c3ad3bf4cfe40a160eb9271505bd9 | pytest.raises|test_grid_plotting|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy import numpy as np import pytest from ... import grids from ...tools.misc import skipUnlessModule from ..base import GridBase, discretize_interval def iter_grids(): """ gener... | NotImplementedError) | 106 | 9 |
zwicker-group/py-pde | train | 119 | 4362b9955f2f1d8bb5fee42d1da32c512451a74f | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 123 | 13 | pytest.raises | test_operators | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
import numpy as np
import pytest
from ... import grids
from ...tools.misc import skipUnlessModule
from ..base import GridBase, discretize_interval
def iter_grids():
""" generate some test grids """
... | ValueError) | modified | 69f02abda310ec754c0be9877effde9dcbc7af8a6783b422bb5b82a8d5574dae | pytest.raises|test_operators|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy import numpy as np import pytest from ... import grids from ...tools.misc import skipUnlessModule from ..base import GridBase, discretize_interval def iter_grids(): """ generate ... | ValueError) | 121 | 13 |
zwicker-group/py-pde | train | 119 | 4362b9955f2f1d8bb5fee42d1da32c512451a74f | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 126 | 8 | assert | test_operators | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
import numpy as np
import pytest
from ... import grids
from ...tools.misc import skipUnlessModule
from ..base import GridBase, discretize_interval
def iter_grids():
""" generate some test grids """
... | grid.operators | modified | 2d89e358611c970a5ac5474d95626cd56e1657d137f2e5075a6a9bc71bac0ff6 | assert|test_operators|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy import numpy as np import pytest from ... import grids from ...tools.misc import skipUnlessModule from ..base import GridBase, discretize_interval def iter_grids(): """ generate some te... | grid.operators | 124 | 8 |
zwicker-group/py-pde | train | 120 | 24af2b58a543b8227fc8ef909c4fe213606172c9 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 282 | 8 | assert | test_interpolation_to_cartesian | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid
from ...grids.cartesian import CartesianGridBase
from ...tools.misc import skipUnlessModule
from .. import ... | pytest.approx(2) | modified | a8e9c37167eb7aca67c69b9b56b466baf96c50ef0bf6e4d8ffa0443e26e1919d | assert|test_interpolation_to_cartesian|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid from ...grids.cartesian import CartesianGridBase from ...tools.misc im... | pytest.approx(2) | 282 | 8 |
zwicker-group/py-pde | train | 120 | 24af2b58a543b8227fc8ef909c4fe213606172c9 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 291 | 4 | assert | test_get_cartesian_grid | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid
from ...grids.cartesian import CartesianGridBase
from ...tools.misc import skipUnlessModule
from .. import ... | grid.volume | modified | fe968b641abbe270a539a22f70c43c01d7006b2e4d3fecb864e14288908fb3e3 | assert|test_get_cartesian_grid|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid from ...grids.cartesian import CartesianGridBase from ...tools.misc import ski... | grid.volume | 291 | 4 |
zwicker-group/py-pde | train | 120 | 24af2b58a543b8227fc8ef909c4fe213606172c9 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 405 | 4 | assert_* | test_vector_from_scalars | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid
from ...grids.cartesian import CartesianGridBase
from ...tools.misc import skipUnlessModule
from .. import ... | [[[0, 1]], [[2, 3]]]) | modified | 6789da6c89a78124356b6f4016bfa342b2d41687d8374c7ee03880c597800676 | assert_*|test_vector_from_scalars|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid from ...grids.cartesian import CartesianGridBase from ...tools.misc import ... | [[[0, 1]], [[2, 3]]]) | 405 | 4 |
zwicker-group/py-pde | train | 120 | 24af2b58a543b8227fc8ef909c4fe213606172c9 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 421 | 4 | assert_* | test_dot_product | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid
from ...grids.cartesian import CartesianGridBase
from ...tools.misc import skipUnlessModule
from .. import ... | expected) | modified | 86dc0233aa66bbcb3fa8fea3dfaf702f47be3a5a6294bcb31f043e33eaf2173e | assert_*|test_dot_product|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid from ...grids.cartesian import CartesianGridBase from ...tools.misc import skipUnle... | expected) | 421 | 4 |
zwicker-group/py-pde | train | 121 | f205999b819e49c1236fb6b10516068330a15bca | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 380 | 9 | pytest.raises | test_interpolate_1d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
from functools import partial
import numpy as np
import pytest
from .. import CartesianGrid, UnitGrid
from ..boundaries import Boundaries, DomainError, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a rand... | DomainError) | modified | c80845a35e05226201505ae80f94fa747531c37f08f554b3110d21d3f5f515e7 | pytest.raises|test_interpolate_1d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random from functools import partial import numpy as np import pytest from .. import CartesianGrid, UnitGrid from ..boundaries import Boundaries, DomainError, PeriodicityError def _get_cartesian_grid(dim=2, periodic... | DomainError) | 379 | 9 |
zwicker-group/py-pde | train | 121 | f205999b819e49c1236fb6b10516068330a15bca | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 403 | 4 | assert | test_interpolate_3d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
from functools import partial
import numpy as np
import pytest
from .. import CartesianGrid, UnitGrid
from ..boundaries import Boundaries, DomainError, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a rand... | pytest.approx(1) | modified | 370ca35a8327c4e7d597bb0280af07fa1089c99fcc8ff1e91771ff658f254550 | assert|test_interpolate_3d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random from functools import partial import numpy as np import pytest from .. import CartesianGrid, UnitGrid from ..boundaries import Boundaries, DomainError, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True):... | pytest.approx(1) | 402 | 4 |
zwicker-group/py-pde | train | 121 | f205999b819e49c1236fb6b10516068330a15bca | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 52 | 8 | assert | test_serialization | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
from functools import partial
import numpy as np
import pytest
from ... import grids
from ...tools.misc import skipUnlessModule
from ..base import GridBase, discretize_interval
def iter_grids():
"""... | g._cache_hash() | modified | 31ba26ca84189e8e8a9dd12ed6cbd1ef324d17923e0a2416da0213c4b5fd2339 | assert|test_serialization|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy from functools import partial import numpy as np import pytest from ... import grids from ...tools.misc import skipUnlessModule from ..base import GridBase, discretize_interval def ... | g._cache_hash() | 51 | 8 |
zwicker-group/py-pde | train | 121 | f205999b819e49c1236fb6b10516068330a15bca | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 101 | 8 | assert | test_integration | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
from functools import partial
import numpy as np
import pytest
from ... import grids
from ...tools.misc import skipUnlessModule
from ..base import GridBase, discretize_interval
def iter_grids():
"""... | pytest.approx(grid.integrate(arr)) | modified | e7aaaa81493adaf5b67bcdc82874c5d2f3665fde567d91c9d6c01b96256350a0 | assert|test_integration|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy from functools import partial import numpy as np import pytest from ... import grids from ...tools.misc import skipUnlessModule from ..base import GridBase, discretize_interval def it... | pytest.approx(grid.integrate(arr)) | 99 | 8 |
zwicker-group/py-pde | train | 121 | f205999b819e49c1236fb6b10516068330a15bca | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 110 | 9 | pytest.raises | test_grid_plotting | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
from copy import copy, deepcopy
from functools import partial
import numpy as np
import pytest
from ... import grids
from ...tools.misc import skipUnlessModule
from ..base import GridBase, discretize_interval
def iter_grids():
"""... | NotImplementedError) | modified | 0be5a08fe1e7017d7aa238d08733af5e6f487ced1f414ff3cebab7da3dfa10b5 | pytest.raises|test_grid_plotting|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools from copy import copy, deepcopy from functools import partial import numpy as np import pytest from ... import grids from ...tools.misc import skipUnlessModule from ..base import GridBase, discretize_interv... | NotImplementedError) | 108 | 9 |
zwicker-group/py-pde | train | 121 | f205999b819e49c1236fb6b10516068330a15bca | train | pde/grids/tests/test_spherical.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical.py | 168 | 4 | assert_* | test_spherical_annulus | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from .. import PolarGrid, SphericalGrid
from ..boundaries.local import NeumannBC
@pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid])
def test_spherical_base_bcs(grid_class):
""" test setting boundary ... | np.array([4])) | modified | 2c45e960cca0afd24616f5c8940351cec6f8e925912e2930c901521e4b52eeae | assert_*|test_spherical_annulus|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from .. import PolarGrid, SphericalGrid from ..boundaries.local import NeumannBC @pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid]) def test_spherical_base_bcs(grid_class): ""... | np.array([4])) | 167 | 4 |
zwicker-group/py-pde | train | 121 | f205999b819e49c1236fb6b10516068330a15bca | train | pde/grids/tests/test_spherical.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical.py | 195 | 4 | assert | test_setting_boundary_conditions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from .. import PolarGrid, SphericalGrid
from ..boundaries.local import NeumannBC
@pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid])
def test_spherical_base_bcs(grid_class):
""" test setting boundary ... | b_inner | modified | e36da74920790379c4866ce4655f9a3833bda6708126cb0d579bba581b88a0c1 | assert|test_setting_boundary_conditions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from .. import PolarGrid, SphericalGrid from ..boundaries.local import NeumannBC @pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid]) def test_spherical_base_bcs(grid_cl... | b_inner | 194 | 4 |
zwicker-group/py-pde | train | 121 | f205999b819e49c1236fb6b10516068330a15bca | train | pde/grids/tests/test_spherical.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical.py | 201 | 4 | assert | test_setting_boundary_conditions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from .. import PolarGrid, SphericalGrid
from ..boundaries.local import NeumannBC
@pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid])
def test_spherical_base_bcs(grid_class):
""" test setting boundary ... | b_inner | modified | fd9feb02b02e35482759a6f17746f9a292cc973605e926a04e2d5c8b0fd9ce0e | assert|test_setting_boundary_conditions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from .. import PolarGrid, SphericalGrid from ..boundaries.local import NeumannBC @pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid]) def test_spherical_base_bcs(grid_cl... | b_inner | 200 | 4 |
zwicker-group/py-pde | train | 122 | 3bd589c896e2593b1e819d0ba45c4a9a3b2a0745 | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 74 | 9 | pytest.raises | test_collections | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | KeyError) | modified | 36b85d2823474e6b30ba02644364e0f22eec2c7b52d37aeadb92b35e9b4dd6b4 | pytest.raises|test_collections|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase fr... | KeyError) | 73 | 9 |
zwicker-group/py-pde | train | 122 | 3bd589c896e2593b1e819d0ba45c4a9a3b2a0745 | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 136 | 8 | assert_* | test_smoothing_collection | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | fields[i].smooth(sgm).data) | modified | 23a4c4f38a9aa19b443462449086a2cf31053bcd6cef22a502a66b61d6d3a16d | assert_*|test_smoothing_collection|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBas... | fields[i].smooth(sgm).data) | 135 | 8 |
zwicker-group/py-pde | train | 122 | 3bd589c896e2593b1e819d0ba45c4a9a3b2a0745 | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 148 | 4 | assert | test_scalar_random_uniform | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | not np.allclose(fc[0].data, fc[1].data) | modified | 19f1bcbb9f8a898af2ae7fc3c0c6f0b4f62e5f7d1871b925d7c5ff9ea88a53c9 | assert|test_scalar_random_uniform|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase... | not np.allclose(fc[0].data, fc[1].data) | 147 | 4 |
zwicker-group/py-pde | train | 122 | 3bd589c896e2593b1e819d0ba45c4a9a3b2a0745 | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 162 | 4 | assert | test_from_scalar_expressions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | grid | modified | 59836e50e06a013411518d584520504464eef092a90693a82c2241734fff1011 | assert|test_from_scalar_expressions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBa... | grid | 161 | 4 |
zwicker-group/py-pde | train | 122 | 3bd589c896e2593b1e819d0ba45c4a9a3b2a0745 | train | pde/fields/tests/test_vectorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_vectorial.py | 24 | 4 | assert | test_vectors | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, UnitGrid
from ...tools.misc import module_available, skipUnlessModule
from ..base import FieldBase
from ..tensorial import Tensor2Field
from ..vectorial import VectorField
def test_ve... | grid | modified | 9e9fd3119728364412528d57dfd8e2b97a5c8592a6b800366cffd2d614205f67 | assert|test_vectors|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, UnitGrid from ...tools.misc import module_available, skipUnlessModule from ..base import FieldBase from ..tensorial import Tensor2Field from ..vectorial import VectorF... | grid | 24 | 4 |
zwicker-group/py-pde | train | 122 | 3bd589c896e2593b1e819d0ba45c4a9a3b2a0745 | train | pde/fields/tests/test_vectorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_vectorial.py | 117 | 4 | assert_* | test_vector_laplace | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, UnitGrid
from ...tools.misc import module_available, skipUnlessModule
from ..base import FieldBase
from ..tensorial import Tensor2Field
from ..vectorial import VectorField
def test_ve... | -np.cos(x) - np.sin(y)) | modified | f16925efa5f383e417b4a4fde9cb9893560dd86518cec8e675dde7666afc51f7 | assert_*|test_vector_laplace|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, UnitGrid from ...tools.misc import module_available, skipUnlessModule from ..base import FieldBase from ..tensorial import Tensor2Field from ..vectorial impor... | -np.cos(x) - np.sin(y)) | 117 | 4 |
zwicker-group/py-pde | train | 122 | 3bd589c896e2593b1e819d0ba45c4a9a3b2a0745 | train | pde/fields/tests/test_vectorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_vectorial.py | 147 | 4 | assert_* | test_outer_product | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, UnitGrid
from ...tools.misc import module_available, skipUnlessModule
from ..base import FieldBase
from ..tensorial import Tensor2Field
from ..vectorial import VectorField
def test_ve... | np.array([1, 2, 2, 4]).reshape(2, 2, 1, 1)) | modified | ae9569394c994d10af15b1c7b32591aa34fe473d6281265ac6035608dd52d822 | assert_*|test_outer_product|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, UnitGrid from ...tools.misc import module_available, skipUnlessModule from ..base import FieldBase from ..tensorial import Tensor2Field from ..vectorial import... | np.array([1, 2, 2, 4]).reshape(2, 2, 1, 1)) | 147 | 4 |
zwicker-group/py-pde | train | 122 | 3bd589c896e2593b1e819d0ba45c4a9a3b2a0745 | train | pde/fields/tests/test_vectorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_vectorial.py | 190 | 8 | assert_* | test_boundary_interpolation_vector | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, UnitGrid
from ...tools.misc import module_available, skipUnlessModule
from ..base import FieldBase
from ..tensorial import Tensor2Field
from ..vectorial import VectorField
def test_ve... | bndry_val) | modified | bc6697a161320d8f99e2ded4e64eb6f451d28ebed7f893f9d5d280624b68d25d | assert_*|test_boundary_interpolation_vector|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, UnitGrid from ...tools.misc import module_available, skipUnlessModule from ..base import FieldBase from ..tensorial import Tensor2Field from ..... | bndry_val) | 190 | 8 |
zwicker-group/py-pde | train | 123 | c78f200521ca11ce6aef57132cae0245e1d2a84c | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 184 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | ["s1", None] | added | 0014bc32006721db831afef591af50552c22eb5d8bd1b1395f329db0daee0c75 | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase from .te... | null | null | null |
zwicker-group/py-pde | train | 123 | c78f200521ca11ce6aef57132cae0245e1d2a84c | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 185 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | "s1" | added | c35ceb786fe439e0b2324402d5fa0a44f2700be92acb85329647e7bba5ef3deb | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase from .te... | null | null | null |
zwicker-group/py-pde | train | 123 | c78f200521ca11ce6aef57132cae0245e1d2a84c | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 193 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | ["c"] | added | 17ed94300041f55ebce0b7f4864ced76c6f035971c1c32dff1e200f94dde0a5c | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase from .te... | null | null | null |
zwicker-group/py-pde | train | 123 | c78f200521ca11ce6aef57132cae0245e1d2a84c | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 194 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | ["c", "b"] | added | 8d7310221c54931b4585be5b87c05c9c55fbbba94af9dfa4d54c238b280a395a | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase from .te... | null | null | null |
zwicker-group/py-pde | train | 124 | eb03426c30da7f1ee6d0cf9f15bed10e008ed46b | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 186 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | "s1" | modified | 26a367a474fe9e95b1e09120b47bfe2e128d64baf375bd97dbe8458e5f5e41d1 | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase from .te... | "s1" | 185 | 4 |
zwicker-group/py-pde | train | 124 | eb03426c30da7f1ee6d0cf9f15bed10e008ed46b | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 191 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | str(["c", "b"]) | modified | c96b1e6fab42970f836b319d1090ce6f647b8c1fe8417a3b9303710b2b9f1141 | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase from .te... | str(["c", "b"]) | 190 | 4 |
zwicker-group/py-pde | train | 124 | eb03426c30da7f1ee6d0cf9f15bed10e008ed46b | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 192 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | repr(["c", "b"]) | modified | 050205bf1ce10c5c1a829e5a54f3af68bec2d95d5db5a530d4380192b7109413 | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase from .te... | repr(["c", "b"]) | 191 | 4 |
zwicker-group/py-pde | train | 124 | eb03426c30da7f1ee6d0cf9f15bed10e008ed46b | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 194 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | ["c"] | modified | a096b8a2377c16082336cb1a3078fd6c58fabb45718f7afa625b48a81fdb3de8 | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase from .te... | ["c"] | 193 | 4 |
zwicker-group/py-pde | train | 126 | 2aff04f396cd3b3ddecf4d786317fc449c2faa8d | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 192 | 4 | assert | test_vector_laplace | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
import numpy as np
import pytest
from scipy import ndimage
from ....fields import ScalarField
from ... import CartesianGrid, UnitGrid
from .. import cartesian as ops
π = np.pi
def _get_random_grid_bcs(ndim: int, dx="random", periodic="r... | (ndim,) + bcs.grid.shape | modified | c1494be470bf115234fce48a4fa2e9421e6381b92e6a881bb0658ccfc0a469e5 | assert|test_vector_laplace|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random import numpy as np import pytest from scipy import ndimage from ....fields import ScalarField from ... import CartesianGrid, UnitGrid from .. import cartesian as ops π = np.pi def _get_random_grid_bcs(ndim: int, dx=... | (ndim,) + bcs.grid.shape | 192 | 4 |
zwicker-group/py-pde | train | 126 | 2aff04f396cd3b3ddecf4d786317fc449c2faa8d | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 238 | 8 | assert_* | test_div_grad_linear | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
import numpy as np
import pytest
from scipy import ndimage
from ....fields import ScalarField
from ... import CartesianGrid, UnitGrid
from .. import cartesian as ops
π = np.pi
def _get_random_grid_bcs(ndim: int, dx="random", periodic="r... | np.zeros(32)) | modified | a3695b98a2b7f929e9e21e7858e50fc33e8cc21699e2328bf8fd3c3595f2b9d4 | assert_*|test_div_grad_linear|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random import numpy as np import pytest from scipy import ndimage from ....fields import ScalarField from ... import CartesianGrid, UnitGrid from .. import cartesian as ops π = np.pi def _get_random_grid_bcs(ndim: int, ... | np.zeros(32)) | 238 | 8 |
zwicker-group/py-pde | train | 126 | 2aff04f396cd3b3ddecf4d786317fc449c2faa8d | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 254 | 4 | assert_* | test_div_grad_quadratic | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
import numpy as np
import pytest
from scipy import ndimage
from ....fields import ScalarField
from ... import CartesianGrid, UnitGrid
from .. import cartesian as ops
π = np.pi
def _get_random_grid_bcs(ndim: int, dx="random", periodic="r... | np.full(32, 2.0)) | modified | 4e6a20bf9839b69464a88fc86f2be0e68bfeafb8d3ac80aa3903855a86a2be41 | assert_*|test_div_grad_quadratic|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random import numpy as np import pytest from scipy import ndimage from ....fields import ScalarField from ... import CartesianGrid, UnitGrid from .. import cartesian as ops π = np.pi def _get_random_grid_bcs(ndim: in... | np.full(32, 2.0)) | 254 | 4 |
zwicker-group/py-pde | train | 126 | 2aff04f396cd3b3ddecf4d786317fc449c2faa8d | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 270 | 4 | assert_* | test_gradient_squared | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import random
import numpy as np
import pytest
from scipy import ndimage
from ....fields import ScalarField
from ... import CartesianGrid, UnitGrid
from .. import cartesian as ops
π = np.pi
def _get_random_grid_bcs(ndim: int, dx="random", periodic="r... | s3.data) | modified | 1765887fc8d635c35949c6272d9c4e94a2406c3066718470ef610fa68f6addf6 | assert_*|test_gradient_squared|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import random import numpy as np import pytest from scipy import ndimage from ....fields import ScalarField from ... import CartesianGrid, UnitGrid from .. import cartesian as ops π = np.pi def _get_random_grid_bcs(ndim: int,... | s3.data) | 270 | 4 |
zwicker-group/py-pde | train | 127 | af258b84d5ff223aa791364db28c9e0b63bfe5e3 | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 138 | 8 | assert_* | test_smoothing_collection | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | fields[i].smooth(sgm).data) | modified | 76db8e05fd9d77604fb757e90eca024ea53e5c6d06d0672bb7921734b86de581 | assert_*|test_smoothing_collection|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBas... | fields[i].smooth(sgm).data) | 136 | 8 |
zwicker-group/py-pde | train | 127 | af258b84d5ff223aa791364db28c9e0b63bfe5e3 | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 149 | 4 | assert | test_scalar_random_uniform | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | grid | modified | 036b28c5753e74c63857cb99e545a2cdd3140da5a8e9ad68cc7b5569626fcf58 | assert|test_scalar_random_uniform|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase... | grid | 147 | 4 |
zwicker-group/py-pde | train | 127 | af258b84d5ff223aa791364db28c9e0b63bfe5e3 | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 165 | 4 | assert_* | test_from_scalar_expressions | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | (np.arange(3) + 0.5) ** 2) | modified | 15ed983205118301364ee5dcabc020c1cd5f13cf6804a673b8f6e43022279168 | assert_*|test_from_scalar_expressions|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import Field... | (np.arange(3) + 0.5) ** 2) | 163 | 4 |
zwicker-group/py-pde | train | 127 | af258b84d5ff223aa791364db28c9e0b63bfe5e3 | train | pde/fields/tests/test_collection.py | train | zwicker-group/py-pde:pde/fields/tests/test_collection.py | 186 | 4 | assert | test_field_labels | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import itertools
import numpy as np
import pytest
from ...grids import UnitGrid
from ...tools.misc import skipUnlessModule
from .. import FieldCollection, ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
from .test_generic import iter... | ["s1", None] | modified | a4483ef397f3347e94b4956c835848394a3165b0bbb9780415c5b751c3537604 | assert|test_field_labels|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import itertools import numpy as np import pytest from ...grids import UnitGrid from ...tools.misc import skipUnlessModule from .. import FieldCollection, ScalarField, Tensor2Field, VectorField from ..base import FieldBase from .te... | ["s1", None] | 184 | 4 |
zwicker-group/py-pde | train | 128 | 82f0e3a5b705904b6e482d9a078989f18cdb0d80 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 211 | 4 | assert | test_interpolation_inhomogeneous_bc | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | pytest.approx(v) | modified | e19798d41256bde30161ad3e47576c65251d543f1e0492053739fcbcd8e31ffa | assert|test_interpolation_inhomogeneous_bc|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc... | pytest.approx(v) | 210 | 4 |
zwicker-group/py-pde | train | 128 | 82f0e3a5b705904b6e482d9a078989f18cdb0d80 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 267 | 9 | pytest.raises | test_slice | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | ValueError) | modified | 8d7285b2d42bc79501fd51dc07bd72478290d74136eb779c1613e84189cca899 | pytest.raises|test_slice|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import module_ava... | ValueError) | 266 | 9 |
zwicker-group/py-pde | train | 128 | 82f0e3a5b705904b6e482d9a078989f18cdb0d80 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 387 | 8 | assert_* | test_boundary_interpolation_2d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | bndry_val) | modified | f6951382fe6ae25c8fd39c798e20bd7afb31ac1c21dbe0e328ab7b7e00c56e0e | assert_*|test_boundary_interpolation_2d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc im... | bndry_val) | 386 | 8 |
zwicker-group/py-pde | train | 128 | 82f0e3a5b705904b6e482d9a078989f18cdb0d80 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 401 | 4 | assert_* | test_numpy_ufuncs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | f1.data + 2) | modified | a40afb98a6a1f0bfd734217235c7a93c2058e4d70481e35fc2cbf4afbe879638 | assert_*|test_numpy_ufuncs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import module_a... | f1.data + 2) | 400 | 4 |
zwicker-group/py-pde | train | 128 | 82f0e3a5b705904b6e482d9a078989f18cdb0d80 | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 71 | 4 | assert_* | test_pde_2scalar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | res_b.data) | added | b0381229cccc06795fa3917636e4b4f3ba2459060d797557534c453ca7735c96 | assert_*|test_pde_2scalar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def test_pde_w... | null | null | null |
zwicker-group/py-pde | train | 128 | 82f0e3a5b705904b6e482d9a078989f18cdb0d80 | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 106 | 4 | assert_* | test_compare_swift_hohenberg | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | res2.data) | added | 24c8ff5554680cda2dbdaaace84b67d9feb2ba2d504fe66a279177b2bb55d88d | assert_*|test_compare_swift_hohenberg|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE de... | null | null | null |
zwicker-group/py-pde | train | 128 | 82f0e3a5b705904b6e482d9a078989f18cdb0d80 | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 115 | 9 | pytest.raises | test_custom_operators | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | ValueError) | added | e23e19df515f22c44e3b091babed9833283b6c21d0fe6421f6045e3af6f3407d | pytest.raises|test_custom_operators|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def ... | null | null | null |
zwicker-group/py-pde | train | 128 | 82f0e3a5b705904b6e482d9a078989f18cdb0d80 | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 162 | 9 | pytest.raises | test_pde_spatial_args | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | RuntimeError) | added | 9dff228412cf9fadee8c496fa6ba8f0a7ec9d12730336af29db5af129a0615d4 | pytest.raises|test_pde_spatial_args|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def ... | null | null | null |
zwicker-group/py-pde | train | 129 | bd6da920138fcbe0770b1c1c0c250f5044e99500 | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 172 | 4 | assert_* | test_pde_user_funcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | field.gradient("natural").data[0]) | added | c13e80da365fc6632e1094a003d2e9e2bfeaf3bf1e896c855dbddf84b39c4719 | assert_*|test_pde_user_funcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def test_pd... | null | null | null |
zwicker-group/py-pde | train | 129 | bd6da920138fcbe0770b1c1c0c250f5044e99500 | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 174 | 4 | assert_* | test_pde_user_funcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | field.gradient("natural").data[0]) | added | a4829eb911920036ffeb1fd61001f9a0e187f7cb08b5771044e719e65fdf204d | assert_*|test_pde_user_funcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def test_pd... | null | null | null |
zwicker-group/py-pde | train | 129 | bd6da920138fcbe0770b1c1c0c250f5044e99500 | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 180 | 4 | assert_* | test_pde_user_funcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | j0(field.data)) | added | a0c546976c5d9c809b2d64e0a4388b1f6f34c1f27e7051a7cd1ab91d32e183c6 | assert_*|test_pde_user_funcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def test_pd... | null | null | null |
zwicker-group/py-pde | train | 129 | bd6da920138fcbe0770b1c1c0c250f5044e99500 | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 182 | 9 | pytest.raises | test_pde_user_funcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | TypingError) | added | 3c2a2c9f559c63ff2662da61c62b55d0ecdd59dd380d51219063335c8c5006d4 | pytest.raises|test_pde_user_funcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def te... | null | null | null |
zwicker-group/py-pde | train | 129 | bd6da920138fcbe0770b1c1c0c250f5044e99500 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 102 | 4 | assert | test_trackers | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from ...solvers import Controller, Explici... | data.times | modified | ac8b4ff3688ef62060f9d7f1b181bf997d387d7fa0120dbf78f72f777053fc67 | assert|test_trackers|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE from ...solvers import C... | data.times | 104 | 4 |
zwicker-group/py-pde | train | 129 | bd6da920138fcbe0770b1c1c0c250f5044e99500 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 127 | 4 | assert_* | test_callback_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from ...solvers import Controller, Explici... | data_tracker.data) | modified | 100bce113f688f995617d870657461d8f5bc7ad44a22767ce852926a91741f0a | assert_*|test_callback_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE from ...solver... | data_tracker.data) | 129 | 4 |
zwicker-group/py-pde | train | 129 | bd6da920138fcbe0770b1c1c0c250f5044e99500 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 161 | 4 | assert_* | test_data_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from ...solvers import Controller, Explici... | np.arange(11)) | modified | 919b197f8d40af85b312ea61dd88603102c22878b45a738d393008b0696cc784 | assert_*|test_data_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE from ...solvers im... | np.arange(11)) | 163 | 4 |
zwicker-group/py-pde | train | 129 | bd6da920138fcbe0770b1c1c0c250f5044e99500 | train | pde/trackers/tests/test_trackers.py | test | zwicker-group/py-pde:pde/trackers/tests/test_trackers.py | 206 | 4 | assert | test_consistency_tracker | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import os
import pickle
from unittest import mock
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE
from ...solvers import Controller, Explici... | con.info["t_end"] | modified | 15bc7622b59a2abef45715814583455f7ed6c123eebb27e7a90c88425cd19b61 | assert|test_consistency_tracker|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import os import pickle from unittest import mock import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import AllenCahnPDE, CahnHilliardPDE, DiffusionPDE from ...solve... | con.info["t_end"] | 208 | 4 |
zwicker-group/py-pde | train | 130 | b469d803759495bd5c3fb80aff6976ce1c68392b | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 180 | 4 | assert_* | test_pde_user_funcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | gaussian_filter(field.data, 1)) | modified | b33aad2b615572a459126c4ca35a433609d6861fa32d22e6ec4a0f72dd4b74a8 | assert_*|test_pde_user_funcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def test_pd... | j0(field.data)) | 180 | 4 |
zwicker-group/py-pde | train | 130 | b469d803759495bd5c3fb80aff6976ce1c68392b | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 184 | 9 | pytest.raises | test_pde_user_funcs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | TypingError) | modified | b89b900710b704107cadd4a2e279d1fdfb56d61782a1586adaf58b9efc81f497 | pytest.raises|test_pde_user_funcs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def te... | TypingError) | 182 | 9 |
zwicker-group/py-pde | train | 131 | 2686e75eff9db54dfab0db26a2634d31eac3962c | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 106 | 4 | assert_* | test_laplacian | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | -s.data) | added | 6dd04e19d59e7dc6600153a2e1c093012e7cd40da4ff72fbc7a843d47ea77df4 | assert_*|test_laplacian|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import module_avai... | null | null | null |
zwicker-group/py-pde | train | 131 | 2686e75eff9db54dfab0db26a2634d31eac3962c | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 215 | 4 | assert | test_interpolation_inhomogeneous_bc | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | pytest.approx(v) | added | 4800c56debdd4e3ea61e3888e481b232c0b1b1b5e85f2167bcda07fdbca88bfe | assert|test_interpolation_inhomogeneous_bc|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc... | null | null | null |
zwicker-group/py-pde | train | 131 | 2686e75eff9db54dfab0db26a2634d31eac3962c | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 227 | 4 | assert_* | test_from_image | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | img_data_gray.T[:, ::-1]) | added | 4e05f99bdcc732ac711cf7d00dc12c9b8c2a9c02516831e57b280b5bd72373ee | assert_*|test_from_image|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import module_ava... | null | null | null |
zwicker-group/py-pde | train | 131 | 2686e75eff9db54dfab0db26a2634d31eac3962c | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 400 | 4 | assert_* | test_numpy_ufuncs | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | np.sin(f1.data)) | modified | 7d9a6fb93bf04c54798b45664a2e6c35fb4983c6bb0a23996d9d026d4e614adc | assert_*|test_numpy_ufuncs|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import module_a... | np.sin(f1.data)) | 399 | 4 |
zwicker-group/py-pde | train | 132 | 89474c0c8e7b6884ce132f2a72dc00abb8fc05e5 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 337 | 37 | pytest.approx | test_random_normal | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid
from ...grids.cartesian import CartesianGridBase
from ...tools.misc import skipUnlessModule
from .. import ... | s, rel=0.1, abs=0.1) | modified | ed99bd2b166dc76d1088a4c2b682222f1b7b04326437f2c6f66bcd191e28554f | pytest.approx|test_random_normal|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid from ...grids.cartesian import CartesianGridBase from ...tools.misc import s... | s, rel=0.1, abs=0.1) | 334 | 37 |
zwicker-group/py-pde | train | 132 | 89474c0c8e7b6884ce132f2a72dc00abb8fc05e5 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 364 | 16 | assert_* | test_fluctuations | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid
from ...grids.cartesian import CartesianGridBase
from ...tools.misc import skipUnlessModule
from .. import ... | expect) | modified | 3e1214a85d1830866ac4cca6076ff0c031f28473ab41208694c14bec1c8703ba | assert_*|test_fluctuations|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid from ...grids.cartesian import CartesianGridBase from ...tools.misc import skipUnl... | expect) | 361 | 16 |
zwicker-group/py-pde | train | 132 | 89474c0c8e7b6884ce132f2a72dc00abb8fc05e5 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 478 | 4 | assert_* | test_complex_methods | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | np.full((2,), 2 + 4j)) | added | f5231a20ba1462b5d1c3ac0611fafc04849544abd4b92199f4b7d288a5a83751 | assert_*|test_complex_methods|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import modul... | null | null | null |
zwicker-group/py-pde | train | 132 | 89474c0c8e7b6884ce132f2a72dc00abb8fc05e5 | train | pde/fields/tests/test_tensorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_tensorial.py | 141 | 4 | assert_* | test_tensor_invariants | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, UnitGrid
from ..base import FieldBase
from ..tensorial import Tensor2Field
from .test_generic import iter_grids
def test_tensors():
""" test some tensor calculations """
grid ... | invs[2]) | modified | e8ec523525061230fe07c20d1a84d626f326189365d59e1dfc6f1fc7169c8600 | assert_*|test_tensor_invariants|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, UnitGrid from ..base import FieldBase from ..tensorial import Tensor2Field from .test_generic import iter_grids def test_tensors(): """ test some tensor ca... | invs[2]) | 140 | 4 |
zwicker-group/py-pde | train | 132 | 89474c0c8e7b6884ce132f2a72dc00abb8fc05e5 | train | pde/fields/tests/test_vectorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_vectorial.py | 120 | 4 | assert_* | test_vector_laplace | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, UnitGrid
from ...tools.misc import module_available, skipUnlessModule
from .. import ScalarField, Tensor2Field, VectorField
from ..base import FieldBase
def test_vectors():
""" te... | -np.sin(y) + np.cos(x)) | modified | a9f94099f81361c53b11bf6c1c322662d1643cd49f52c62341c7498fddab74c0 | assert_*|test_vector_laplace|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, UnitGrid from ...tools.misc import module_available, skipUnlessModule from .. import ScalarField, Tensor2Field, VectorField from ..base import FieldBase def t... | -np.sin(y) + np.cos(x)) | 120 | 4 |
zwicker-group/py-pde | train | 132 | 89474c0c8e7b6884ce132f2a72dc00abb8fc05e5 | train | pde/pdes/tests/test_pde.py | val | zwicker-group/py-pde:pde/pdes/tests/test_pde.py | 39 | 4 | assert | test_pde_scalar | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, VectorField
from ...grids import UnitGrid
from ...grids.tests.test_generic import iter_grids
from .. import PDE, SwiftHohenbergPDE
def test_pde_wrong_input():
""" ... | not eq.complex_valued | added | 2e5b2eebca0f65988e73f7c5302adea6143d1b9366d0dc335ce8f78cf93d4c83 | assert|test_pde_scalar|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, VectorField from ...grids import UnitGrid from ...grids.tests.test_generic import iter_grids from .. import PDE, SwiftHohenbergPDE def test_pde_wron... | null | null | null |
zwicker-group/py-pde | train | 132 | 89474c0c8e7b6884ce132f2a72dc00abb8fc05e5 | train | pde/solvers/tests/test_generic.py | test | zwicker-group/py-pde:pde/solvers/tests/test_generic.py | 23 | 4 | assert | test_solver_registration | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField
from ...grids import UnitGrid
from ...pdes import PDE, DiffusionPDE
from .. import (
Controller,
ExplicitSolver,
ImplicitSolver,
ScipySolver,
register... | solvers | modified | d85e25203c5630d9674fe0872df7fabc7d48f2508f89d24e8fc1802377610b10 | assert|test_solver_registration|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField from ...grids import UnitGrid from ...pdes import PDE, DiffusionPDE from .. import ( Controller, ExplicitSolver, ImplicitSolver, ScipySolver... | solvers | 23 | 4 |
zwicker-group/py-pde | train | 132 | 89474c0c8e7b6884ce132f2a72dc00abb8fc05e5 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 234 | 8 | assert | test_complex_expression | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ..expressions import ScalarExpression, TensorExpression, parse_number
def test_parse_number():
""" test parse_number function """
assert parse_number(0) == pytest.approx(0)
assert parse_number(1.235) ==... | expr.constant | added | c37b046259dcc26e42762b3dc5a2d191ee1bac8ee2e5cdeb6d77d53de0e19e90 | assert|test_complex_expression|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ..expressions import ScalarExpression, TensorExpression, parse_number def test_parse_number(): """ test parse_number function """ assert parse_number(0) == pytest.approx(0) assert parse_n... | null | null | null |
zwicker-group/py-pde | train | 133 | 4bd1adb0417ff18ef1783099a5db2ccc039fe48b | train | pde/storage/tests/test_file.py | train | zwicker-group/py-pde:pde/storage/tests/test_file.py | 110 | 17 | pytest.raises | test_storage_fixed_size | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from ...tools.misc import skipUnlessModule
from .. import FileStorage
@skipUnlessModule("h5py")
@pytest.mark.parametrize("... | (TypeError, ValueError, RuntimeError)) | modified | f75f43a4d770135dc22bf9b0fe236fbb77f77b6c6f6d23b5383340af3745a3d6 | pytest.raises|test_storage_fixed_size|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from ...tools.misc import skipUnlessModule from .. import FileStorage @skipUnlessModule(... | (TypeError, ValueError)) | 110 | 17 |
zwicker-group/py-pde | train | 133 | 4bd1adb0417ff18ef1783099a5db2ccc039fe48b | train | pde/storage/tests/test_file.py | train | zwicker-group/py-pde:pde/storage/tests/test_file.py | 130 | 4 | assert | test_appending | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from ...tools.misc import skipUnlessModule
from .. import FileStorage
@skipUnlessModule("h5py")
@pytest.mark.parametrize("... | "writing" | modified | d6c6c0926fa9531b700cecad7e05f9ec12ce478ab8cbe3c1b7945766ea71d741 | assert|test_appending|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from ...tools.misc import skipUnlessModule from .. import FileStorage @skipUnlessModule("h5py") @pytest.... | "writing" | 130 | 4 |
zwicker-group/py-pde | train | 133 | 4bd1adb0417ff18ef1783099a5db2ccc039fe48b | train | pde/storage/tests/test_file.py | train | zwicker-group/py-pde:pde/storage/tests/test_file.py | 154 | 4 | assert | test_keep_opened | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from ...tools.misc import skipUnlessModule
from .. import FileStorage
@skipUnlessModule("h5py")
@pytest.mark.parametrize("... | "reading" | modified | 1cc1568aed40663460fbbf4066f4a6c0651cdf89940d6842f2138c6ac220344d | assert|test_keep_opened|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from ...tools.misc import skipUnlessModule from .. import FileStorage @skipUnlessModule("h5py") @pytes... | "reading" | 154 | 4 |
zwicker-group/py-pde | train | 133 | 4bd1adb0417ff18ef1783099a5db2ccc039fe48b | train | pde/storage/tests/test_file.py | train | zwicker-group/py-pde:pde/storage/tests/test_file.py | 159 | 4 | assert | test_keep_opened | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from ...tools.misc import skipUnlessModule
from .. import FileStorage
@skipUnlessModule("h5py")
@pytest.mark.parametrize("... | storage2.times | modified | fadcab32413b61f18dfd083315fabcd56b2c6bdde6dbc0c3cd9b7da1a00a10ec | assert|test_keep_opened|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from ...tools.misc import skipUnlessModule from .. import FileStorage @skipUnlessModule("h5py") @pytes... | storage2.times | 159 | 4 |
zwicker-group/py-pde | train | 133 | 4bd1adb0417ff18ef1783099a5db2ccc039fe48b | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 246 | 4 | assert | test_expression_special | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ..expressions import ScalarExpression, TensorExpression, parse_number
def test_parse_number():
""" test parse_number function """
assert parse_number(0) == pytest.approx(0)
assert parse_number(1.235) ==... | not expr.constant | added | 6b7e6dfc011ec33e782f9650eea20d6c7981b067eab3447817a5929ac9b897b8 | assert|test_expression_special|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ..expressions import ScalarExpression, TensorExpression, parse_number def test_parse_number(): """ test parse_number function """ assert parse_number(0) == pytest.approx(0) assert parse_n... | null | null | null |
zwicker-group/py-pde | train | 134 | b68eded7ffe0ba030648af422a4b21f58f6a52e6 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 300 | 4 | assert_* | test_poisson_solver_1d | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | grid.axes_coords[0] - 1) | modified | 44ae18c3a4fd298b87f4c04ae36f294eb775fd030ac70014537655a483856293 | assert_*|test_poisson_solver_1d|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import mod... | grid.axes_coords[0] - 1) | 299 | 4 |
zwicker-group/py-pde | train | 134 | b68eded7ffe0ba030648af422a4b21f58f6a52e6 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 457 | 4 | assert | test_complex_dtype | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | pytest.approx(2 + 2j) | modified | 952849a62aace1eef5d81d3eaaf3bc7d1fc4672174202568c344b1e1346e93af | assert|test_complex_dtype|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import module_av... | pytest.approx(2 + 2j) | 456 | 4 |
zwicker-group/py-pde | train | 134 | b68eded7ffe0ba030648af422a4b21f58f6a52e6 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 476 | 8 | assert_* | test_complex_methods | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | np.array([1j, 1j])) | modified | 95ccac590c91d8e252358583cfd8eb30eb2a7b20140dcfa630c52e7097541570 | assert_*|test_complex_methods|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import modul... | np.array([1j, 1j])) | 475 | 8 |
zwicker-group/py-pde | train | 134 | b68eded7ffe0ba030648af422a4b21f58f6a52e6 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 486 | 4 | assert | test_complex_operators | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...grids import CartesianGrid, PolarGrid, UnitGrid
from ...grids.boundaries import DomainError
from ...grids.tests.test_cartesian import _get_cartesian_grid
from ...tools.misc import module_available, skipUnlessModul... | pytest.approx(0) | modified | 17d04064cc083cd72dae0a344958102b214d700735cbd211822e97b1ebd8bd1f | assert|test_complex_operators|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...grids import CartesianGrid, PolarGrid, UnitGrid from ...grids.boundaries import DomainError from ...grids.tests.test_cartesian import _get_cartesian_grid from ...tools.misc import modul... | pytest.approx(0) | 485 | 4 |
zwicker-group/py-pde | train | 135 | 90a6d6fc0c93d4174738051236142f7278cf9d8d | train | pde/storage/tests/test_file.py | train | zwicker-group/py-pde:pde/storage/tests/test_file.py | 117 | 12 | assert_* | test_storage_fixed_size | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from ...tools.misc import skipUnlessModule
from .. import FileStorage
@skipUnlessModule("h5py")
@pytest.mark.parametrize("... | [0, 1]) | modified | 2903661eadd5c86ccc8a5a7193f28e08d51d359d8ed4f14c11b4399381d625b4 | assert_*|test_storage_fixed_size|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from ...tools.misc import skipUnlessModule from .. import FileStorage @skipUnlessModule("h5py... | [0, 1]) | 117 | 12 |
zwicker-group/py-pde | train | 135 | 90a6d6fc0c93d4174738051236142f7278cf9d8d | train | pde/storage/tests/test_file.py | train | zwicker-group/py-pde:pde/storage/tests/test_file.py | 130 | 4 | assert | test_appending | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from ...tools.misc import skipUnlessModule
from .. import FileStorage
@skipUnlessModule("h5py")
@pytest.mark.parametrize("... | "writing" | modified | 300763c55d7b68807c20d23276f61b508ea3fa839825f5fe592c37cc31550a7c | assert|test_appending|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from ...tools.misc import skipUnlessModule from .. import FileStorage @skipUnlessModule("h5py") @pytest.... | "writing" | 130 | 4 |
zwicker-group/py-pde | train | 135 | 90a6d6fc0c93d4174738051236142f7278cf9d8d | train | pde/storage/tests/test_file.py | train | zwicker-group/py-pde:pde/storage/tests/test_file.py | 160 | 4 | assert | test_keep_opened | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from ...tools.misc import skipUnlessModule
from .. import FileStorage
@skipUnlessModule("h5py")
@pytest.mark.parametrize("... | storage2.data | modified | 4a7cb4cda6ba3e2be2038dadf0fae3902ea08be257024dcaa1c66da30fde9685 | assert|test_keep_opened|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from ...tools.misc import skipUnlessModule from .. import FileStorage @skipUnlessModule("h5py") @pytes... | storage2.data | 160 | 4 |
zwicker-group/py-pde | train | 135 | 90a6d6fc0c93d4174738051236142f7278cf9d8d | train | pde/storage/tests/test_generic.py | train | zwicker-group/py-pde:pde/storage/tests/test_generic.py | 103 | 8 | assert | test_storing_extract_range | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import functools
import numpy as np
from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from ...tools.misc import module_available
from .. import FileStorage, Memor... | list(s1.times) | modified | 8011fdfbbc644474cb62ab9294ba50f7e855a2bf23d3e028468c3823f650cd35 | assert|test_storing_extract_range|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import functools import numpy as np from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField from ...grids import UnitGrid from ...pdes import DiffusionPDE from ...tools.misc import module_available fr... | list(s1.times) | 105 | 8 |
zwicker-group/py-pde | train | 135 | 90a6d6fc0c93d4174738051236142f7278cf9d8d | train | pde/storage/tests/test_generic.py | train | zwicker-group/py-pde:pde/storage/tests/test_generic.py | 160 | 8 | assert | test_storage_apply | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import functools
import numpy as np
from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from ...tools.misc import module_available
from .. import FileStorage, Memor... | ScalarField(grid, [1, 2]) | added | 9f4d09c304008d627fdd49712c23a1ea6ae38ba8702ee399875621f6fb26d180 | assert|test_storage_apply|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import functools import numpy as np from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField from ...grids import UnitGrid from ...pdes import DiffusionPDE from ...tools.misc import module_available from .. im... | null | null | null |
zwicker-group/py-pde | train | 135 | 90a6d6fc0c93d4174738051236142f7278cf9d8d | train | pde/storage/tests/test_memory.py | train | zwicker-group/py-pde:pde/storage/tests/test_memory.py | 32 | 4 | assert | test_memory_storage | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from ...grids import UnitGrid
from .. import MemoryStorage
def test_memory_storage():
""" test methods specific to memory storage """
... | s1.times | added | 16ad57c6b3b68f18c0731f26d7caf5d2e8c1a7ea4bbba50ba1ab6b5482922f0b | assert|test_memory_storage|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField from ...grids import UnitGrid from .. import MemoryStorage def test_memory_storage(): """ test methods specific to mem... | null | null | null |
zwicker-group/py-pde | train | 135 | 90a6d6fc0c93d4174738051236142f7278cf9d8d | train | pde/storage/tests/test_memory.py | train | zwicker-group/py-pde:pde/storage/tests/test_memory.py | 59 | 4 | assert | test_field_type_guessing | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from ...grids import UnitGrid
from .. import MemoryStorage
def test_memory_storage():
""" test methods specific to memory storage """
... | s.has_collection | added | 4c91236573a6609e82681bff2ca92c5ee256cad9ca5162970a13dae0eab05f8e | assert|test_field_type_guessing|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField from ...grids import UnitGrid from .. import MemoryStorage def test_memory_storage(): """ test methods specific t... | null | null | null |
zwicker-group/py-pde | train | 135 | 90a6d6fc0c93d4174738051236142f7278cf9d8d | train | pde/storage/tests/test_memory.py | train | zwicker-group/py-pde:pde/storage/tests/test_memory.py | 65 | 9 | pytest.raises | test_field_type_guessing | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField
from ...grids import UnitGrid
from .. import MemoryStorage
def test_memory_storage():
""" test methods specific to memory storage """
... | RuntimeError) | added | 0dcbcaa88bca3a5d8ecdf025d97d52c8969df156f18ef57408eeebe7f820683c | pytest.raises|test_field_type_guessing|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from ...fields import FieldCollection, ScalarField, Tensor2Field, VectorField from ...grids import UnitGrid from .. import MemoryStorage def test_memory_storage(): """ test methods spe... | null | null | null |
zwicker-group/py-pde | train | 136 | dae7e4b2bdde8088bd04f44cf1f3a1e61b880723 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 184 | 13 | pytest.raises | test_data_managment | """
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
"""
import numpy as np
import pytest
from scipy import ndimage
from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid
from ...grids.cartesian import CartesianGridBase
from ...tools.misc import skipUnlessModule
from .. import ... | RuntimeError) | modified | 0a728446cc8dfae5693782c2cacd4dabb9468529dd1d49039699687827bb3d35 | pytest.raises|test_data_managment|""" .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> """ import numpy as np import pytest from scipy import ndimage from ...grids import CartesianGrid, CylindricalGrid, PolarGrid, SphericalGrid, UnitGrid from ...grids.cartesian import CartesianGridBase from ...tools.misc import ... | RuntimeError) | 183 | 13 |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.