repo_id string | cross_repo_split string | commit_index int32 | commit_sha string | in_repo_split string | test_file string | file_split string | split_group string | lineno int32 | col_offset int32 | assertion_type string | test_function string | prefix large_string | target string | assertion_event_type string | assertion_event_id string | assertion_anchor large_string | old_target string | old_lineno int32 | old_col_offset int32 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
zwicker-group/py-pde | train | 27 | 8dcd3ef9bb3a10da36be4b6919cc32330835ad8f | train | pde/fields/tests/test_vectorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_vectorial.py | 76 | 4 | assert_* | test_vector_laplace | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ..vectorial import VectorField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid
def test_vectors():
""" test some vector fields """
grid = CartesianGrid([[0.1, 0.3], [-2, 3]], [3,... | -np.cos(x) - np.sin(y)) | modified | 5d02d67099b4c891300bfe0c67080b609fbf5026acfcb89abae8dedda2486834 | assert_*|test_vector_laplace|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ..vectorial import VectorField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid def test_vectors(): """ test some vector fields """ grid = CartesianGrid([[0.1, 0.3]... | -np.cos(x) - np.sin(y)) | 74 | 4 |
zwicker-group/py-pde | train | 27 | 8dcd3ef9bb3a10da36be4b6919cc32330835ad8f | train | pde/fields/tests/test_vectorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_vectorial.py | 105 | 4 | assert_* | test_outer_product | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ..vectorial import VectorField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid
def test_vectors():
""" test some vector fields """
grid = CartesianGrid([[0.1, 0.3], [-2, 3]], [3,... | np.array([1, 2, 2, 4]).reshape(2, 2, 1, 1)) | modified | cb4affe16888b3b152618d2c8cc54b1ba879802643a6802e7a6efaa67c27afe6 | assert_*|test_outer_product|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ..vectorial import VectorField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid def test_vectors(): """ test some vector fields """ grid = CartesianGrid([[0.1, 0.3],... | np.array([1, 2, 2, 4]).reshape(2, 2, 1, 1)) | 103 | 4 |
zwicker-group/py-pde | train | 27 | 8dcd3ef9bb3a10da36be4b6919cc32330835ad8f | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 54 | 8 | assert_* | test_singular_dimensions_2d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | res.flat) | added | b7bb11d943e1b4687f5599c80616e5f2af0e40934a56954f1143a1dd33b33d22 | assert_*|test_singular_dimensions_2d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim... | null | null | null |
zwicker-group/py-pde | train | 27 | 8dcd3ef9bb3a10da36be4b6919cc32330835ad8f | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 169 | 8 | assert | test_gradient | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | (ndim,) + bcs.grid.shape | added | 7e84807e7546169a22518728838a9104afd58f578ebe8f2e4ba1e095fb60384c | assert|test_gradient|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim: int, dx='rando... | null | null | null |
zwicker-group/py-pde | train | 27 | 8dcd3ef9bb3a10da36be4b6919cc32330835ad8f | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 277 | 4 | assert_* | test_div_grad_quadratic | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | np.full(32, 2.)) | added | 96e185a85b6c9fe3cfdef6e3125e89ed5e35d010623311a2937569bb61a9ec84 | assert_*|test_div_grad_quadratic|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim: in... | null | null | null |
zwicker-group/py-pde | train | 27 | 8dcd3ef9bb3a10da36be4b6919cc32330835ad8f | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 362 | 4 | assert_* | test_poisson_solver_2d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | expect) | added | fe075726cc946994aa05617670a60baa31b8aac4ab58401d914fd40d07e64558 | assert_*|test_poisson_solver_2d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim: int... | null | null | null |
zwicker-group/py-pde | train | 28 | b9e32f903b4252ed5d681e128b4323b0815f45cb | train | pde/pdes/tests/test_generic.py | train | zwicker-group/py-pde:pde/pdes/tests/test_generic.py | 49 | 9 | pytest.raises | test_pde_consistency_test | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import pytest
import numpy as np
from ... import pdes
from ...grids import UnitGrid
from ...fields import ScalarField
@pytest.mark.parametrize('dim', [1, 2])
@pytest.mark.parametrize('pde_class', [pdes.KuramotoSivashinskyPDE,
... | RuntimeError) | added | adc1c0ac6c039fc94be5ee0963c81d2c803273829131723afaa7fe1c0e0dfccb | pytest.raises|test_pde_consistency_test|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import pytest import numpy as np from ... import pdes from ...grids import UnitGrid from ...fields import ScalarField @pytest.mark.parametrize('dim', [1, 2]) @pytest.mark.parametrize('pde_class', [pdes.KuramotoSivash... | null | null | null |
zwicker-group/py-pde | train | 30 | f8f141d7cdaa0d9b3c89356ab57dd01785c7bb12 | train | tests/performance_laplace.py | train | zwicker-group/py-pde:tests/performance_laplace.py | 187 | 16 | assert_* | #!/usr/bin/env python3
import sys
from pathlib import Path
PACKAGE_PATH = Path(__file__).resolve().parents[1]
sys.path.append(str(PACKAGE_PATH))
import numpy as np
import numba
from pde.grids import UnitGrid, CylindricalGrid, SphericalGrid
from pde.grids.operators import (cartesian, cylindrical, spherical,
... | result) | modified | 12938ef1185779d2b295dd4e8ffebca0f939b8d3c886a946891ea74d135fd09c | assert_*||#!/usr/bin/env python3 import sys from pathlib import Path PACKAGE_PATH = Path(__file__).resolve().parents[1] sys.path.append(str(PACKAGE_PATH)) import numpy as np import numba from pde.grids import UnitGrid, CylindricalGrid, SphericalGrid from pde.grids.operators import (cartesian, cylindrical, spherical, PA... | result) | 187 | 16 | |
zwicker-group/py-pde | train | 30 | f8f141d7cdaa0d9b3c89356ab57dd01785c7bb12 | train | tests/performance_laplace.py | train | zwicker-group/py-pde:tests/performance_laplace.py | 209 | 12 | assert_* | #!/usr/bin/env python3
import sys
from pathlib import Path
PACKAGE_PATH = Path(__file__).resolve().parents[1]
sys.path.append(str(PACKAGE_PATH))
import numpy as np
import numba
from pde.grids import UnitGrid, CylindricalGrid, SphericalGrid
from pde.grids.operators import (cartesian, cylindrical, spherical,
... | result) | modified | dcd34b9ba90850db2bfcb2a791ff41767d7f1f3615ba686a8e8f1a4a814e611e | assert_*||#!/usr/bin/env python3 import sys from pathlib import Path PACKAGE_PATH = Path(__file__).resolve().parents[1] sys.path.append(str(PACKAGE_PATH)) import numpy as np import numba from pde.grids import UnitGrid, CylindricalGrid, SphericalGrid from pde.grids.operators import (cartesian, cylindrical, spherical, PA... | result) | 209 | 12 | |
zwicker-group/py-pde | train | 31 | a367ac7142f95e601f875953c57480493bbdb13e | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 334 | 4 | assert_* | test_poisson_solver_1d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | grid.axes_coords[0] - 1) | modified | a8d1a8c5db0b8fc36ec58fb64f952fc705bf3181467aaea1f596077c5550062b | assert_*|test_poisson_solver_1d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim: int... | grid.axes_coords[0] - 1) | 333 | 4 |
zwicker-group/py-pde | train | 31 | a367ac7142f95e601f875953c57480493bbdb13e | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 337 | 4 | assert_* | test_poisson_solver_1d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | grid.axes_coords[0] - 1) | modified | eed3944745b540b594aef0bb1e43b38b0b7a2d791f413dc7efac88ea44b72a37 | assert_*|test_poisson_solver_1d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim: int... | grid.axes_coords[0] - 1) | 336 | 4 |
zwicker-group/py-pde | train | 31 | a367ac7142f95e601f875953c57480493bbdb13e | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 345 | 4 | assert_* | test_poisson_solver_1d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | 1 + 0.5 * xs**2) | modified | ef1f9410fc7cf42fa04a26811eae2dda07a74a51cdf8586d74a3f9fb5b94b881 | assert_*|test_poisson_solver_1d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim: int... | 1 + 0.5 * xs**2) | 344 | 4 |
zwicker-group/py-pde | train | 31 | a367ac7142f95e601f875953c57480493bbdb13e | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 363 | 4 | assert_* | test_poisson_solver_2d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | expect) | modified | 2a61ce1931c53864f1d1c46950052f799e9cf0ecd5f3f4adab8115561efa2b15 | assert_*|test_poisson_solver_2d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim: int... | expect) | 362 | 4 |
zwicker-group/py-pde | train | 32 | 86d0f933e439a44b2da0e61622cbd0cc31ffcf6b | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 81 | 8 | assert | test_arithmetics | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, Sph... | isinstance(str(f1), str) | modified | 3cdd0de35508b70182191401ef3ce1783e570d22e2209ad3dd618c2fff3612d0 | assert|test_arithmetics|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, Cartesia... | isinstance(str(f1), str) | 79 | 8 |
zwicker-group/py-pde | train | 32 | 86d0f933e439a44b2da0e61622cbd0cc31ffcf6b | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 306 | 37 | pytest.approx | test_random_uniform | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, Sph... | (a + b) / 2, rel=0.02) | modified | e5d04bab74cd4f19c5f9764841039c93b690a37cd89ae9d565baba7dc135b72c | pytest.approx|test_random_uniform|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid... | (a + b) / 2, rel=0.02) | 303 | 37 |
zwicker-group/py-pde | train | 32 | 86d0f933e439a44b2da0e61622cbd0cc31ffcf6b | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 102 | 4 | assert_* | test_gradient | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.tests.test_cartesian import _get_ca... | np.cos(y)) | added | 340c5b0af8d6ab477a8ed3fbc0c5d3ecaaa87791c9024e506d0e65e377629e72 | assert_*|test_gradient|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.tests.test_cart... | null | null | null |
zwicker-group/py-pde | train | 32 | 86d0f933e439a44b2da0e61622cbd0cc31ffcf6b | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 176 | 4 | assert_* | test_get_line_data | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.tests.test_cartesian import _get_ca... | c.get_line_data(extract='cut_y')) | modified | 3778f7c9d7031641015273bdf1e489be1d610bf7b1863400c3cfb27c29678072 | assert_*|test_get_line_data|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.tests.test... | 0) | 177 | 8 |
zwicker-group/py-pde | train | 32 | 86d0f933e439a44b2da0e61622cbd0cc31ffcf6b | train | pde/fields/tests/test_vectorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_vectorial.py | 22 | 4 | assert | test_vectors | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ..vectorial import VectorField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid
from ...tools.misc import module_available
def test_vectors():
""" test some vector fields """
grid... | np.allclose(v1.magnitude, np.sqrt(2)) | modified | eede623b9de75c7333c0213a5a66e94b11a24cedc3d2c352950b064333997b9c | assert|test_vectors|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ..vectorial import VectorField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid from ...tools.misc import module_available def test_vectors(): """ test some vector fields ""... | np.allclose(v1.magnitude, np.sqrt(2)) | 21 | 4 |
zwicker-group/py-pde | train | 32 | 86d0f933e439a44b2da0e61622cbd0cc31ffcf6b | train | pde/fields/tests/test_vectorial.py | train | zwicker-group/py-pde:pde/fields/tests/test_vectorial.py | 110 | 4 | assert_* | test_outer_product | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ..vectorial import VectorField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid
from ...tools.misc import module_available
def test_vectors():
""" test some vector fields """
grid... | np.array([1, 2, 2, 4]).reshape(2, 2, 1, 1)) | modified | 9c402d875a2f70b1f796508e7aee91ef455f4d29a32c9f9d518f8886c18bbe34 | assert_*|test_outer_product|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ..vectorial import VectorField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid from ...tools.misc import module_available def test_vectors(): """ test some vector f... | np.array([1, 2, 2, 4]).reshape(2, 2, 1, 1)) | 108 | 4 |
zwicker-group/py-pde | train | 32 | 86d0f933e439a44b2da0e61622cbd0cc31ffcf6b | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 156 | 4 | assert_* | test_gradient_1d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | np.zeros((1, 5))) | modified | 8980a8ed5cf5829f94af5df5f91e7927e7faaa0caefb5daa332fc1df313d5361 | assert_*|test_gradient_1d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim: int, dx='... | np.zeros((1, 5))) | 156 | 4 |
zwicker-group/py-pde | train | 32 | 86d0f933e439a44b2da0e61622cbd0cc31ffcf6b | train | pde/grids/operators/tests/test_cartesian.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cartesian.py | 209 | 4 | assert | test_vector_laplace | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
from scipy import ndimage
import pytest
from .. import cartesian as ops
from ... import UnitGrid, CartesianGrid
from ....fields import ScalarField
π = np.pi
def _get_random_grid_bcs(ndim: int, dx='random', periodi... | (ndim,) + bcs.grid.shape | modified | 7a32bb5ef0a120903a8f5d5dbd20afe0d8136b85cfb743563541776fcf467ab9 | assert|test_vector_laplace|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np from scipy import ndimage import pytest from .. import cartesian as ops from ... import UnitGrid, CartesianGrid from ....fields import ScalarField π = np.pi def _get_random_grid_bcs(ndim: int, dx=... | (ndim,) + bcs.grid.shape | 209 | 4 |
zwicker-group/py-pde | train | 33 | 5499ede25d42aae231d15cdf6a90fe36641b1e44 | train | pde/grids/tests/test_cylindrical.py | train | zwicker-group/py-pde:pde/grids/tests/test_cylindrical.py | 94 | 4 | assert | test_polar_conversion | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from .. import CylindricalGrid
def test_cylindrical_grid():
""" test simple cylindrical grid """
for periodic in [True, False]:
grid = CylindricalGrid(4, (-1, 2), (8, 9), periodic_z=periodic)
... | np.all(0.09 <= dists) | added | 2b3699cfd37b20134561d94a4d5f286a6fd8998c2f5839200f16b0e89f2b657f | assert|test_polar_conversion|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from .. import CylindricalGrid def test_cylindrical_grid(): """ test simple cylindrical grid """ for periodic in [True, False]: grid = CylindricalGrid(4, (-1, 2), (8, 9), periodic_z=periodic) ms... | null | null | null |
zwicker-group/py-pde | train | 33 | 5499ede25d42aae231d15cdf6a90fe36641b1e44 | train | pde/grids/tests/test_cylindrical.py | train | zwicker-group/py-pde:pde/grids/tests/test_cylindrical.py | 95 | 4 | assert | test_polar_conversion | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from .. import CylindricalGrid
def test_cylindrical_grid():
""" test simple cylindrical grid """
for periodic in [True, False]:
grid = CylindricalGrid(4, (-1, 2), (8, 9), periodic_z=periodic)
... | np.any(dists < 0.11) | added | 20b8b148b760a5d0a5725c64403776bdc2c43f4250775ecba65d13b1edd9affe | assert|test_polar_conversion|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from .. import CylindricalGrid def test_cylindrical_grid(): """ test simple cylindrical grid """ for periodic in [True, False]: grid = CylindricalGrid(4, (-1, 2), (8, 9), periodic_z=periodic) ms... | null | null | null |
zwicker-group/py-pde | train | 33 | 5499ede25d42aae231d15cdf6a90fe36641b1e44 | train | pde/grids/tests/test_cylindrical.py | train | zwicker-group/py-pde:pde/grids/tests/test_cylindrical.py | 97 | 4 | assert | test_polar_conversion | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from .. import CylindricalGrid
def test_cylindrical_grid():
""" test simple cylindrical grid """
for periodic in [True, False]:
grid = CylindricalGrid(4, (-1, 2), (8, 9), periodic_z=periodic)
... | np.any(dists > 0.8 * np.sqrt(2)) | added | 7c1d76065aad482248606b5563dc8e66862f690130a3515ef9fb2ce1d0d0a1fa | assert|test_polar_conversion|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from .. import CylindricalGrid def test_cylindrical_grid(): """ test simple cylindrical grid """ for periodic in [True, False]: grid = CylindricalGrid(4, (-1, 2), (8, 9), periodic_z=periodic) ms... | null | null | null |
zwicker-group/py-pde | train | 33 | 5499ede25d42aae231d15cdf6a90fe36641b1e44 | train | pde/tools/tests/test_cache.py | train | zwicker-group/py-pde:pde/tools/tests/test_cache.py | 475 | 4 | assert | test_serialized_dict | '''
.. codeauthor:: David Zwicker <dzwicker@seas.harvard.edu>
'''
from __future__ import division
import copy
import sys
import collections
import pytest
import numpy as np
from .. import cache
def deep_getsizeof(obj, ids=None):
"""Find the memory footprint of a Python object
This is a recursive functi... | ['a'] | added | 4e0708e163bd3b88e60e49decb5f7b504114eeff1e8ca83bfa4dee8beef1cb2a | assert|test_serialized_dict|''' .. codeauthor:: David Zwicker <dzwicker@seas.harvard.edu> ''' from __future__ import division import copy import sys import collections import pytest import numpy as np from .. import cache def deep_getsizeof(obj, ids=None): """Find the memory footprint of a Python object This is a recur... | null | null | null |
zwicker-group/py-pde | train | 33 | 5499ede25d42aae231d15cdf6a90fe36641b1e44 | train | pde/tools/tests/test_spherical.py | test | zwicker-group/py-pde:pde/tools/tests/test_spherical.py | 24 | 26 | pytest.approx | test_volume_conversion | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import math
import os.path
import random
import tempfile
import pytest
import numpy as np
from scipy import spatial, integrate
from .. import spherical
def test_volume_conversion():
""" tests conversion of volume and radius of droplet """
for... | radius) | modified | f70e0adab8fe941862488cbb302847d050175a17277b2ca58e96815a0c870424 | pytest.approx|test_volume_conversion|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import math import os.path import random import tempfile import pytest import numpy as np from scipy import spatial, integrate from .. import spherical def test_volume_conversion(): """ tests conversion of volume and ra... | radius) | 22 | 26 |
zwicker-group/py-pde | train | 33 | 5499ede25d42aae231d15cdf6a90fe36641b1e44 | train | pde/tools/tests/test_spherical.py | test | zwicker-group/py-pde:pde/tools/tests/test_spherical.py | 96 | 20 | pytest.approx | test_spherical_voronoi | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import math
import os.path
import random
import tempfile
import pytest
import numpy as np
from scipy import spatial, integrate
from .. import spherical
def test_volume_conversion():
""" tests conversion of volume and radius of droplet """
for... | 4 * np.pi) | added | bc6647ba7e7ec594a75d11af8c1932e7aa41245ea8c26401f0553850f9650aec | pytest.approx|test_spherical_voronoi|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import math import os.path import random import tempfile import pytest import numpy as np from scipy import spatial, integrate from .. import spherical def test_volume_conversion(): """ tests conversion of volume and ra... | null | null | null |
zwicker-group/py-pde | train | 33 | 5499ede25d42aae231d15cdf6a90fe36641b1e44 | train | pde/tools/tests/test_spherical.py | test | zwicker-group/py-pde:pde/tools/tests/test_spherical.py | 149 | 12 | assert | test_spherical_index | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import math
import os.path
import random
import tempfile
import pytest
import numpy as np
from scipy import spatial, integrate
from .. import spherical
def test_volume_conversion():
""" tests conversion of volume and radius of droplet """
for... | m == l | added | 3865cd2bb29157310403fc0756a61fd98b35cdf71bd4aea7f7c4cfd21151f0d3 | assert|test_spherical_index|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import math import os.path import random import tempfile import pytest import numpy as np from scipy import spatial, integrate from .. import spherical def test_volume_conversion(): """ tests conversion of volume and radius of d... | null | null | null |
zwicker-group/py-pde | train | 33 | 5499ede25d42aae231d15cdf6a90fe36641b1e44 | train | pde/tools/tests/test_spherical.py | test | zwicker-group/py-pde:pde/tools/tests/test_spherical.py | 174 | 16 | assert | test_spherical_harmonics_real | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import math
import os.path
import random
import tempfile
import pytest
import numpy as np
from scipy import spatial, integrate
from .. import spherical
def test_volume_conversion():
""" tests conversion of volume and radius of droplet """
for... | pytest.approx(1) | added | 7459db582029a8c1e0182e295d8b8f371de32629aea331f9d7df49f6c384f027 | assert|test_spherical_harmonics_real|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import math import os.path import random import tempfile import pytest import numpy as np from scipy import spatial, integrate from .. import spherical def test_volume_conversion(): """ tests conversion of volume and ra... | null | null | null |
zwicker-group/py-pde | train | 34 | cb3ef7b8f0ec256f95749df65abdd78523eccc40 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 191 | 13 | pytest.raises | test_data_managment | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | RuntimeError) | modified | de9c81f1be35f931366780f62962305f6dbc78aabb0992f579df0e5d9b9562e4 | pytest.raises|test_data_managment|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianGrid, ... | RuntimeError) | 192 | 13 |
zwicker-group/py-pde | train | 34 | cb3ef7b8f0ec256f95749df65abdd78523eccc40 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 257 | 4 | assert_* | test_interpolation_values | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | f.data[..., 2, 2]) | added | 0ab4e742e934caec37ca8ce05c7ebcdf28242bc218e378a46e42d3433b500b3b | assert_*|test_interpolation_values|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianGrid,... | null | null | null |
zwicker-group/py-pde | train | 34 | cb3ef7b8f0ec256f95749df65abdd78523eccc40 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 288 | 8 | assert | test_interpolation_to_cartesian | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | pytest.approx(2) | added | 8d7609f182ad82227576f9e8eb4c0d0b04e8163069a789299aa89b8f761b7011 | assert|test_interpolation_to_cartesian|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianG... | null | null | null |
zwicker-group/py-pde | train | 34 | cb3ef7b8f0ec256f95749df65abdd78523eccc40 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 401 | 9 | pytest.raises | test_vector_from_scalars | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | ValueError) | added | 85cf075564297797f5ed51828a589979aace066d4a79fa68eb752e1adda9b960 | pytest.raises|test_vector_from_scalars|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianG... | null | null | null |
zwicker-group/py-pde | train | 34 | cb3ef7b8f0ec256f95749df65abdd78523eccc40 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 88 | 4 | assert_* | test_laplacian | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.tests.test_cartesian import _get_ca... | -s.data) | modified | 8cb6d7655a0fc64d14b9f7a28aec59c3d55faf03279073bf188aec75f555d4f0 | assert_*|test_laplacian|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.tests.test_car... | -s.data) | 88 | 4 |
zwicker-group/py-pde | train | 34 | cb3ef7b8f0ec256f95749df65abdd78523eccc40 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 111 | 4 | assert_* | test_interpolation_to_grid | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.tests.test_cartesian import _get_ca... | sf2.data) | modified | 9a16a7df67d0c7cf35ca4d390221f97ac9e286eb25811f1ad4bbb4bf4c98be14 | assert_*|test_interpolation_to_grid|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.te... | sf2.data) | 113 | 8 |
zwicker-group/py-pde | train | 34 | cb3ef7b8f0ec256f95749df65abdd78523eccc40 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 137 | 4 | assert | test_add_interpolated_scalar | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.tests.test_cartesian import _get_ca... | pytest.approx(2 * a) | modified | ada14ae9457ae8c09508e7725c3168c91d26526253742f5b4779f30c39235105 | assert|test_add_interpolated_scalar|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.te... | pytest.approx(2 * a) | 140 | 4 |
zwicker-group/py-pde | train | 34 | cb3ef7b8f0ec256f95749df65abdd78523eccc40 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 208 | 4 | assert_* | test_from_image | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.tests.test_cartesian import _get_ca... | img_data_gray.T[:, ::-1]) | modified | 78bd228bc77fa93bbfee66be13647a8d61ef33aa74537264425f110cad5d79ea | assert_*|test_from_image|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.tests.test_ca... | img_data_gray.T[:, ::-1]) | 211 | 4 |
zwicker-group/py-pde | train | 35 | 05cf555fd4b1af337e8746ce86994b71961db6e5 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 299 | 4 | assert | test_get_cartesian_grid | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | grid.volume | added | 8f628e2a2608ef7790fbdecb702069b28f4cb8638cbb587fcdd47b1065c0e295 | assert|test_get_cartesian_grid|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianGrid, Pol... | null | null | null |
zwicker-group/py-pde | train | 35 | 05cf555fd4b1af337e8746ce86994b71961db6e5 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 414 | 9 | pytest.raises | test_vector_from_scalars | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | ValueError) | added | e988d58c955ebec2b43c2597cd4f35ded265e08e11906400d00dd9a5793a9042 | pytest.raises|test_vector_from_scalars|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianG... | null | null | null |
zwicker-group/py-pde | train | 35 | 05cf555fd4b1af337e8746ce86994b71961db6e5 | train | pde/grids/operators/tests/test_cylindrical.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_cylindrical.py | 153 | 4 | assert_* | test_grid_div_grad | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
from .. import cylindrical as ops
from ... import CylindricalGrid, CartesianGrid
from ....fields import ScalarField, VectorField
def test_laplace_cyl():
""" test the implementation of the laplace operator """
for boundary_z ... | res[1:-1]) | modified | 074f78054aa5b6ac07d4bd010a2085abfec31249d245b3e10a701686777bc96a | assert_*|test_grid_div_grad|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np from .. import cylindrical as ops from ... import CylindricalGrid, CartesianGrid from ....fields import ScalarField, VectorField def test_laplace_cyl(): """ test the implementation of the laplace operator """ ... | res[1:-1]) | 153 | 4 |
zwicker-group/py-pde | train | 35 | 05cf555fd4b1af337e8746ce86994b71961db6e5 | train | pde/grids/operators/tests/test_polar.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_polar.py | 100 | 4 | assert_* | test_grid_div_grad | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import pytest
import numpy as np
from .. import polar as ops
from ... import PolarGrid, CartesianGrid
from ....fields import ScalarField, VectorField, Tensor2Field
def test_findiff():
""" test operator for a simple polar grid """
grid = Po... | res[1:-1]) | added | ead8b728258e5e338ba712ed037812becb2efd1bd0d60ba3fd28e6c9d269dd5c | assert_*|test_grid_div_grad|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import pytest import numpy as np from .. import polar as ops from ... import PolarGrid, CartesianGrid from ....fields import ScalarField, VectorField, Tensor2Field def test_findiff(): """ test operator for a simple polar grid ""... | null | null | null |
zwicker-group/py-pde | train | 35 | 05cf555fd4b1af337e8746ce86994b71961db6e5 | train | pde/grids/operators/tests/test_spherical.py | train | zwicker-group/py-pde:pde/grids/operators/tests/test_spherical.py | 106 | 4 | assert_* | test_grid_div_grad | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import pytest
import numpy as np
from .. import spherical as ops
from ... import SphericalGrid, CartesianGrid
from ....fields import ScalarField, VectorField, Tensor2Field
def test_findiff_sph():
""" test operator for a simple spherical grid """
... | res[1:-1]) | added | ce9fd87ac96f456b16713e04e6e34ba4deb7420a35b9748101f03ea4aa077ed7 | assert_*|test_grid_div_grad|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import pytest import numpy as np from .. import spherical as ops from ... import SphericalGrid, CartesianGrid from ....fields import ScalarField, VectorField, Tensor2Field def test_findiff_sph(): """ test operator for a simple s... | null | null | null |
zwicker-group/py-pde | train | 35 | 05cf555fd4b1af337e8746ce86994b71961db6e5 | train | pde/grids/tests/test_cylindrical.py | train | zwicker-group/py-pde:pde/grids/tests/test_cylindrical.py | 69 | 9 | pytest.raises | test_setting_domain_cylindrical | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from .. import CylindricalGrid
def test_cylindrical_grid():
""" test simple cylindrical grid """
for periodic in [True, False]:
grid = CylindricalGrid(4, (-1, 2), (8, 9), periodic_z=periodic)
... | ValueError) | added | f7ee66a799b3bc8cefc2a20c41fa9a288033ae701fd46a1ed2a9b0b144c6174b | pytest.raises|test_setting_domain_cylindrical|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from .. import CylindricalGrid def test_cylindrical_grid(): """ test simple cylindrical grid """ for periodic in [True, False]: grid = CylindricalGrid(4, (-1, 2), (8, 9), period... | null | null | null |
zwicker-group/py-pde | train | 35 | 05cf555fd4b1af337e8746ce86994b71961db6e5 | train | pde/grids/tests/test_spherical.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical.py | 162 | 4 | assert_* | test_spherical_annulus | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ...grids import PolarGrid, SphericalGrid
@pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid])
def test_spherical_base_bcs(grid_class):
""" test setting boundary conditions on spherical grids """
... | grid.point_to_cell(p)) | modified | 5af93e9561c74cd10e357314d344d9bea39ea094768360eea89b1f88c12dca7f | assert_*|test_spherical_annulus|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ...grids import PolarGrid, SphericalGrid @pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid]) def test_spherical_base_bcs(grid_class): """ test setting boundary conditions ... | np.linspace(2.125, 3.875, 8)) | 159 | 4 |
zwicker-group/py-pde | train | 35 | 05cf555fd4b1af337e8746ce86994b71961db6e5 | train | pde/grids/tests/test_spherical.py | train | zwicker-group/py-pde:pde/grids/tests/test_spherical.py | 183 | 4 | assert_* | test_spherical_to_cartesian | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ...grids import PolarGrid, SphericalGrid
@pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid])
def test_spherical_base_bcs(grid_class):
""" test setting boundary conditions on spherical grids """
... | pf_cart2.data) | added | db5972c5c7c181b859d7035c7f242de4140d2d0d9c33e23e83e20a83843d3dec | assert_*|test_spherical_to_cartesian|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ...grids import PolarGrid, SphericalGrid @pytest.mark.parametrize("grid_class", [PolarGrid, SphericalGrid]) def test_spherical_base_bcs(grid_class): """ test setting boundary condit... | null | null | null |
zwicker-group/py-pde | train | 36 | 5069571735c48d38887fa5e37d6947d22f40b97a | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 232 | 12 | assert | test_projection | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.tests.test_cartesian import _get_ca... | pytest.approx(sf.average) | added | a88a24a9f3ed2a172e0d98f4aa34361fe4321b4a8c60df8e11d81f65dad6e517 | assert|test_projection|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.tests.test_cart... | null | null | null |
zwicker-group/py-pde | train | 36 | 5069571735c48d38887fa5e37d6947d22f40b97a | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 244 | 8 | assert | test_slice | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.tests.test_cartesian import _get_ca... | grid.dim | added | 6b7ec33487c09af2f68bba6d659de1bc047e4e273f78f04264e872968ce72edf | assert|test_slice|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.tests.test_cartesian... | null | null | null |
zwicker-group/py-pde | train | 36 | 5069571735c48d38887fa5e37d6947d22f40b97a | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 245 | 8 | assert | test_slice | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.tests.test_cartesian import _get_ca... | grid.num_axes - 1 | added | 6b71ab1e602d538ce2f916668555e46c6f1a17bb9afdabe512e469a2fcee2d0b | assert|test_slice|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.tests.test_cartesian... | null | null | null |
zwicker-group/py-pde | train | 36 | 5069571735c48d38887fa5e37d6947d22f40b97a | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 97 | 4 | assert | test_unit_grid_2d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
import pytest
from .. import UnitGrid, CartesianGrid
from ..boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a random Cartesian grid of given dimension """
... | "f8[:, :]" | modified | 2891f94a44b82e8dcfbfacb14e1f72d9d8ac0e22fd533e472dc5d598dcbc7c30 | assert|test_unit_grid_2d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np import pytest from .. import UnitGrid, CartesianGrid from ..boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """ return a random Cartesian grid of given ... | "f8[:, :]" | 98 | 4 |
zwicker-group/py-pde | train | 36 | 5069571735c48d38887fa5e37d6947d22f40b97a | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 172 | 4 | assert_* | test_rect_grid_1d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
import pytest
from .. import UnitGrid, CartesianGrid
from ..boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a random Cartesian grid of given dimension """
... | 16 - 1e-10) | modified | 490a2821dcd74a8266262672b0a146cda5c8791b12700e767795fd1435f674b4 | assert_*|test_rect_grid_1d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np import pytest from .. import UnitGrid, CartesianGrid from ..boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """ return a random Cartesian grid of give... | 16 - 1e-10) | 173 | 4 |
zwicker-group/py-pde | train | 36 | 5069571735c48d38887fa5e37d6947d22f40b97a | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 214 | 4 | assert | test_rect_grid_2d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
import pytest
from .. import UnitGrid, CartesianGrid
from ..boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a random Cartesian grid of given dimension """
... | 0.75 | modified | 0bb9d1c39b564e17850b75ef4e2d8364a38a8046270b4db0734116f033d2c387 | assert|test_rect_grid_2d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np import pytest from .. import UnitGrid, CartesianGrid from ..boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """ return a random Cartesian grid of given ... | 0.75 | 215 | 4 |
zwicker-group/py-pde | train | 36 | 5069571735c48d38887fa5e37d6947d22f40b97a | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 34 | 4 | assert_* | test_discretize | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import numpy as np
import pytest
from ... import grids
from ..base import discretize_interval, GridBase
from ...tools.misc import skipUnlessModule
def iter_grids():
""" generate some test grids """
yield grids.UnitGrid([2, 2]... | x_expect) | modified | 6c6fdb598ddb9bb055c3bfb205f737a7100d7b99a40fb60085122fe71cd84ae9 | assert_*|test_discretize|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import numpy as np import pytest from ... import grids from ..base import discretize_interval, GridBase from ...tools.misc import skipUnlessModule def iter_grids(): """ generate some test grids """ yield grids.Unit... | x_expect) | 35 | 4 |
zwicker-group/py-pde | train | 36 | 5069571735c48d38887fa5e37d6947d22f40b97a | train | pde/grids/tests/test_generic.py | val | zwicker-group/py-pde:pde/grids/tests/test_generic.py | 73 | 8 | assert | test_iter_mirror_points | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import numpy as np
import pytest
from ... import grids
from ..base import discretize_interval, GridBase
from ...tools.misc import skipUnlessModule
def iter_grids():
""" generate some test grids """
yield grids.UnitGrid([2, 2]... | num_expect | added | 2da2965c1d70321422526d04c6a0f96cd822028123610e9b8ff5363f08445ed0 | assert|test_iter_mirror_points|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import numpy as np import pytest from ... import grids from ..base import discretize_interval, GridBase from ...tools.misc import skipUnlessModule def iter_grids(): """ generate some test grids """ yield grid... | null | null | null |
zwicker-group/py-pde | train | 37 | aef576512d36b5f84b4077b23d5533e446266045 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 29 | 4 | assert_* | test_interpolation_singular | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | 1 + 4*x.ravel()) | modified | 843842afa158fc949bb2298b7c214fe79cd3ac4438afef0ef87a019baaf429f4 | assert_*|test_interpolation_singular|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.b... | 1 + 4*x.ravel()) | 28 | 4 |
zwicker-group/py-pde | train | 37 | aef576512d36b5f84b4077b23d5533e446266045 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 163 | 4 | assert_* | test_random_harmonic | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | y.data) | modified | 8912c054473becd597bc075a5784d4afeced8e451a8b2ac28abeb02fad9fffe3 | assert_*|test_random_harmonic|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.boundari... | y.data) | 162 | 4 |
zwicker-group/py-pde | train | 37 | aef576512d36b5f84b4077b23d5533e446266045 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 187 | 4 | assert_* | test_from_expression | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | [[0.25, 0.75]]) | modified | 07ca3a08b34a9f55c9fcd590d912cad506fe01d5b19d3e7b5a2c7b5a946063ae | assert_*|test_from_expression|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.boundari... | [[0.25, 0.75]]) | 186 | 4 |
zwicker-group/py-pde | train | 37 | aef576512d36b5f84b4077b23d5533e446266045 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 253 | 9 | pytest.raises | test_slice | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | ValueError) | added | 3299b1f6c0a19c99a5d3751e310576bba13a373cebaf518f8164724a7f3c0e54 | pytest.raises|test_slice|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.boundaries im... | null | null | null |
zwicker-group/py-pde | train | 37 | aef576512d36b5f84b4077b23d5533e446266045 | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 27 | 9 | pytest.raises | test_degenerated_grid | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
import pytest
from .. import UnitGrid, CartesianGrid
from ..boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a random Cartesian grid of given dimension """
... | ValueError) | added | eee1161f02709414fda8617319e09a9197760a89523a98e43a69baa0ecb24094 | pytest.raises|test_degenerated_grid|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np import pytest from .. import UnitGrid, CartesianGrid from ..boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """ return a random Cartesian gri... | null | null | null |
zwicker-group/py-pde | train | 37 | aef576512d36b5f84b4077b23d5533e446266045 | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 233 | 4 | assert | test_rect_grid_2d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
import pytest
from .. import UnitGrid, CartesianGrid
from ..boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a random Cartesian grid of given dimension """
... | np.allclose(grid.distance_real(c1, c2), 0) | added | c60c857283861ce3a91cda6505a5bca0ffd0689dd5e2e82d37094e9fd11c2b75 | assert|test_rect_grid_2d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np import pytest from .. import UnitGrid, CartesianGrid from ..boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """ return a random Cartesian grid of given ... | null | null | null |
zwicker-group/py-pde | train | 37 | aef576512d36b5f84b4077b23d5533e446266045 | train | pde/grids/tests/test_cartesian.py | test | zwicker-group/py-pde:pde/grids/tests/test_cartesian.py | 243 | 4 | assert_* | test_rect_grid_3d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import random
import numpy as np
import pytest
from .. import UnitGrid, CartesianGrid
from ..boundaries import Boundaries, PeriodicityError
def _get_cartesian_grid(dim=2, periodic=True):
""" return a random Cartesian grid of given dimension """
... | np.ones(3)) | added | 4c20401038e05ae0f819e9893990144fe9ccfef585fd8abb7ca08dbdfea6f98c | assert_*|test_rect_grid_3d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import random import numpy as np import pytest from .. import UnitGrid, CartesianGrid from ..boundaries import Boundaries, PeriodicityError def _get_cartesian_grid(dim=2, periodic=True): """ return a random Cartesian grid of give... | null | null | null |
zwicker-group/py-pde | train | 37 | aef576512d36b5f84b4077b23d5533e446266045 | train | pde/solvers/tests/test_generic.py | test | zwicker-group/py-pde:pde/solvers/tests/test_generic.py | 46 | 8 | assert_* | test_compare_solvers | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from .. import Controller, ExplicitSolver, ImplicitSolver, ScipySolver
from .. import registered_solvers
def test_solver_registration()... | s2.data) | added | 27d857ccde86228fd97be562a49d908b9a9358532a7bb935f25ec964223c9de2 | assert_*|test_compare_solvers|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from .. import Controller, ExplicitSolver, ImplicitSolver, ScipySolver from .. import registered_solvers def t... | null | null | null |
zwicker-group/py-pde | train | 38 | 1b77fed96557ff5aceec35a3e63526c270dce0d2 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 265 | 9 | pytest.raises | test_slice_positions | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | ValueError) | added | 1c1d4ba26a7f61b71315e5d1967177b048878ed382650650afde70ef7e6ed075 | pytest.raises|test_slice_positions|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.bou... | null | null | null |
zwicker-group/py-pde | train | 38 | 1b77fed96557ff5aceec35a3e63526c270dce0d2 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 276 | 4 | assert_* | test_poisson_solver_1d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | grid.axes_coords[0] - 1) | added | d89958e36cb2a85256cde031d0be2b80d5e8ad030c1033e02e72ef90a9390ed4 | assert_*|test_poisson_solver_1d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.bounda... | null | null | null |
zwicker-group/py-pde | train | 38 | 1b77fed96557ff5aceec35a3e63526c270dce0d2 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 279 | 4 | assert_* | test_poisson_solver_1d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | grid.axes_coords[0] - 1) | modified | b2abbfe0444e09660ba32484d5c994b4c1dde1160095036b7e7f98e94898d08b | assert_*|test_poisson_solver_1d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.bounda... | 1 + 0.5 * xs**2) | 279 | 4 |
zwicker-group/py-pde | train | 38 | 1b77fed96557ff5aceec35a3e63526c270dce0d2 | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 309 | 4 | assert_* | test_poisson_solver_2d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | expect) | added | 266ece54c18dc558d19cc600e10b37f83a2b39382c10a4d67e668cad7a65d1fe | assert_*|test_poisson_solver_2d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.bounda... | null | null | null |
zwicker-group/py-pde | train | 39 | fd2c7b69403cb4cacd311bdfd5d391732e924a59 | train | pde/grids/boundaries/tests/test_local.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local.py | 79 | 4 | assert | test_individual_boundaries | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ..local import _get_arr_1d, BCBase
from ... import UnitGrid
def test_get_arr_1d():
""" test the _get_arr_1d function """
# 1d
a = np.arange(3)
arr_1d, i, bc_idx = _get_arr_1d(a, [1], 0)
assert ... | bc.check_value_rank(1) | modified | cbf225c34fffea8f219a3481fffb444a86af863a84923cb767af56d7363e9fc6 | assert|test_individual_boundaries|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ..local import _get_arr_1d, BCBase from ... import UnitGrid def test_get_arr_1d(): """ test the _get_arr_1d function """ # 1d a = np.arange(3) arr_1d, i, bc_idx = _get_arr_1d(a, [1], 0... | bc.check_value_rank(1) | 77 | 4 |
zwicker-group/py-pde | train | 39 | fd2c7b69403cb4cacd311bdfd5d391732e924a59 | train | pde/grids/boundaries/tests/test_local.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local.py | 140 | 4 | assert | test_mixed_condition | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ..local import _get_arr_1d, BCBase
from ... import UnitGrid
def test_get_arr_1d():
""" test the _get_arr_1d function """
# 1d
a = np.arange(3)
arr_1d, i, bc_idx = _get_arr_1d(a, [1], 0)
assert ... | pytest.approx(-1) | modified | 1492ead31e4fa661a1ff3b46b82d026dba92ee22a74c3c7133619014054f1d25 | assert|test_mixed_condition|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ..local import _get_arr_1d, BCBase from ... import UnitGrid def test_get_arr_1d(): """ test the _get_arr_1d function """ # 1d a = np.arange(3) arr_1d, i, bc_idx = _get_arr_1d(a, [1], 0) asse... | pytest.approx(-1) | 138 | 4 |
zwicker-group/py-pde | train | 39 | fd2c7b69403cb4cacd311bdfd5d391732e924a59 | train | pde/grids/boundaries/tests/test_local.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_local.py | 176 | 4 | assert | test_inhomogeneous_bcs | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ..local import _get_arr_1d, BCBase
from ... import UnitGrid
def test_get_arr_1d():
""" test the _get_arr_1d function """
# 1d
a = np.arange(3)
arr_1d, i, bc_idx = _get_arr_1d(a, [1], 0)
assert ... | pytest.approx(1) | added | 07edcd29291ca4896bfa2b533c4c59f32299450f92bed75f80945cd969bd3f2e | assert|test_inhomogeneous_bcs|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ..local import _get_arr_1d, BCBase from ... import UnitGrid def test_get_arr_1d(): """ test the _get_arr_1d function """ # 1d a = np.arange(3) arr_1d, i, bc_idx = _get_arr_1d(a, [1], 0) as... | null | null | null |
zwicker-group/py-pde | train | 39 | fd2c7b69403cb4cacd311bdfd5d391732e924a59 | train | pde/solvers/tests/test_explicit.py | val | zwicker-group/py-pde:pde/solvers/tests/test_explicit.py | 49 | 4 | assert | test_stochastic_solvers | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import pytest
import numpy as np
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from .. import Controller, ExplicitSolver
def test_compare_explicit():
""" test explicit solvers """
grid = UnitG... | not solver1.info['stochastic'] | modified | 48b63681322f228c2b3294e6b41d4a1c8d75a1a10ad2215fe02a08d19a6062a4 | assert|test_stochastic_solvers|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import pytest import numpy as np from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from .. import Controller, ExplicitSolver def test_compare_explicit(): """ test explicit solver... | not solver1.info['stochastic'] | 49 | 4 |
zwicker-group/py-pde | train | 39 | fd2c7b69403cb4cacd311bdfd5d391732e924a59 | train | pde/solvers/tests/test_explicit.py | val | zwicker-group/py-pde:pde/solvers/tests/test_explicit.py | 59 | 9 | pytest.raises | test_unsupported_stochastic_solvers | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import pytest
import numpy as np
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from .. import Controller, ExplicitSolver
def test_compare_explicit():
""" test explicit solvers """
grid = UnitG... | RuntimeError) | modified | bb4ae33989c32b245b1a11daa754f0de38283f7e4ccc3cf95e8780bcef6bbb40 | pytest.raises|test_unsupported_stochastic_solvers|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import pytest import numpy as np from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from .. import Controller, ExplicitSolver def test_compare_explicit(): """ t... | RuntimeError) | 59 | 9 |
zwicker-group/py-pde | train | 39 | fd2c7b69403cb4cacd311bdfd5d391732e924a59 | train | pde/solvers/tests/test_generic.py | test | zwicker-group/py-pde:pde/solvers/tests/test_generic.py | 19 | 4 | assert | test_solver_registration | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from .. import Controller, ExplicitSolver, ImplicitSolver, ScipySolver
from .. import registered_solvers
def test_solver_... | solvers | modified | 88bf5a64f2593bca98d73222a36e86ff16065015f95433a199782a8149b77194 | assert|test_solver_registration|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from .. import Controller, ExplicitSolver, ImplicitSolver, ScipySolver from .. import register... | solvers | 18 | 4 |
zwicker-group/py-pde | train | 39 | fd2c7b69403cb4cacd311bdfd5d391732e924a59 | train | pde/solvers/tests/test_generic.py | test | zwicker-group/py-pde:pde/solvers/tests/test_generic.py | 20 | 4 | assert | test_solver_registration | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from .. import Controller, ExplicitSolver, ImplicitSolver, ScipySolver
from .. import registered_solvers
def test_solver_... | solvers | modified | 694be2de53c31cb6866e1ada9c2c01c4828a6a154e50da8ac35fa20cd7b54412 | assert|test_solver_registration|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from .. import Controller, ExplicitSolver, ImplicitSolver, ScipySolver from .. import register... | solvers | 19 | 4 |
zwicker-group/py-pde | train | 39 | fd2c7b69403cb4cacd311bdfd5d391732e924a59 | train | pde/solvers/tests/test_generic.py | test | zwicker-group/py-pde:pde/solvers/tests/test_generic.py | 48 | 4 | assert_* | test_compare_solvers | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
import pytest
from ...fields import ScalarField
from ...grids import UnitGrid
from ...pdes import DiffusionPDE
from .. import Controller, ExplicitSolver, ImplicitSolver, ScipySolver
from .. import registered_solvers
def test_solver_... | s2.data) | added | b49f8bbec75ad8ca7d56ddc8cbcbcdb898604b9247f702eac1d65d217608d80f | assert_*|test_compare_solvers|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np import pytest from ...fields import ScalarField from ...grids import UnitGrid from ...pdes import DiffusionPDE from .. import Controller, ExplicitSolver, ImplicitSolver, ScipySolver from .. import registered... | null | null | null |
zwicker-group/py-pde | train | 40 | 932577ebd0179db682ae64208eeb176497954179 | train | pde/pdes/tests/test_diffusion.py | train | zwicker-group/py-pde:pde/pdes/tests/test_diffusion.py | 37 | 4 | assert_* | test_simple_diffusion_value | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
from .. import DiffusionPDE
from ...grids import UnitGrid, CartesianGrid
from ...fields import ScalarField
def test_diffusion_single():
""" test some methods of the simple diffusion model """
eq = DiffusionPDE()
assert i... | grid.axes_coords[0]) | modified | a9f3e2419640cdf1c0fd26816d1b4e4f1a2d686d02c3e7df639fc8b2a65b0008 | assert_*|test_simple_diffusion_value|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np from .. import DiffusionPDE from ...grids import UnitGrid, CartesianGrid from ...fields import ScalarField def test_diffusion_single(): """ test some methods of the simple diffusion model """ eq = Dif... | grid.axes_coords[0]) | 37 | 4 |
zwicker-group/py-pde | train | 40 | 932577ebd0179db682ae64208eeb176497954179 | train | pde/pdes/tests/test_diffusion.py | train | zwicker-group/py-pde:pde/pdes/tests/test_diffusion.py | 49 | 4 | assert_* | test_simple_diffusion_flux_right | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
from .. import DiffusionPDE
from ...grids import UnitGrid, CartesianGrid
from ...fields import ScalarField
def test_diffusion_single():
""" test some methods of the simple diffusion model """
eq = DiffusionPDE()
assert i... | 3 * grid.axes_coords[0]) | modified | eee6fa3b949430bd3c5247c834f91cf4c571246d7e024610863980c81804d0ee | assert_*|test_simple_diffusion_flux_right|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np from .. import DiffusionPDE from ...grids import UnitGrid, CartesianGrid from ...fields import ScalarField def test_diffusion_single(): """ test some methods of the simple diffusion model """ eq ... | 3 * grid.axes_coords[0]) | 49 | 4 |
zwicker-group/py-pde | train | 40 | 932577ebd0179db682ae64208eeb176497954179 | train | pde/pdes/tests/test_diffusion.py | train | zwicker-group/py-pde:pde/pdes/tests/test_diffusion.py | 61 | 4 | assert_* | test_simple_diffusion_flux_left | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import numpy as np
from .. import DiffusionPDE
from ...grids import UnitGrid, CartesianGrid
from ...fields import ScalarField
def test_diffusion_single():
""" test some methods of the simple diffusion model """
eq = DiffusionPDE()
assert i... | 2 - 2 * grid.axes_coords[0]) | modified | 077a2effb4e7410ceeffe5bc4449592fa7a63c39e598d11bce31fd7d027df2a6 | assert_*|test_simple_diffusion_flux_left|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import numpy as np from .. import DiffusionPDE from ...grids import UnitGrid, CartesianGrid from ...fields import ScalarField def test_diffusion_single(): """ test some methods of the simple diffusion model """ eq =... | 2 - 2 * grid.axes_coords[0]) | 61 | 4 |
zwicker-group/py-pde | train | 42 | 2b76a92318e8d1872df1a8b749089dbff237c292 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 16 | 4 | assert | test_parse_number | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import pytest
import numpy as np
from ..expressions import parse_number, ScalarExpression, TensorExpression
def test_parse_number():
""" test parse_number function """
assert parse_number(0) == pytest.approx(0)
assert parse_number(1.235) =... | pytest.approx(0) | modified | f24b3f895adcb6dda75569ec7c044a1c0f95e7cdf94a5f898519bab59afc7005 | assert|test_parse_number|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import pytest import numpy as np from ..expressions import parse_number, ScalarExpression, TensorExpression def test_parse_number(): """ test parse_number function """ assert parse_number(0) == pytest.approx(0) assert parse_number(... | pytest.approx(0) | 16 | 4 |
zwicker-group/py-pde | train | 42 | 2b76a92318e8d1872df1a8b749089dbff237c292 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 74 | 4 | assert | test_single_arg | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import pytest
import numpy as np
from ..expressions import parse_number, ScalarExpression, TensorExpression
def test_parse_number():
""" test parse_number function """
assert parse_number(0) == pytest.approx(0)
assert parse_number(1.235) =... | g.constant | modified | f2d87d54d0238095616ad2568c9820d1cc7a1f54d56e429495b916fea90062f5 | assert|test_single_arg|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import pytest import numpy as np from ..expressions import parse_number, ScalarExpression, TensorExpression def test_parse_number(): """ test parse_number function """ assert parse_number(0) == pytest.approx(0) assert parse_number(1.... | [2] | 71 | 4 |
zwicker-group/py-pde | train | 42 | 2b76a92318e8d1872df1a8b749089dbff237c292 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 91 | 41 | pytest.approx | test_two_args | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import pytest
import numpy as np
from ..expressions import parse_number, ScalarExpression, TensorExpression
def test_parse_number():
""" test parse_number function """
assert parse_number(0) == pytest.approx(0)
assert parse_number(1.235) =... | 32*np.log(4)) | added | 8cd0da7bc8b66e61198af5da19ebd6a03efef1a3671fee7f7293693f0d3f568b | pytest.approx|test_two_args|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import pytest import numpy as np from ..expressions import parse_number, ScalarExpression, TensorExpression def test_parse_number(): """ test parse_number function """ assert parse_number(0) == pytest.approx(0) assert parse_numb... | null | null | null |
zwicker-group/py-pde | train | 42 | 2b76a92318e8d1872df1a8b749089dbff237c292 | train | pde/tools/tests/test_expressions.py | train | zwicker-group/py-pde:pde/tools/tests/test_expressions.py | 167 | 4 | assert | test_synonyms | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import pytest
import numpy as np
from ..expressions import parse_number, ScalarExpression, TensorExpression
def test_parse_number():
""" test parse_number function """
assert parse_number(0) == pytest.approx(0)
assert parse_number(1.235) =... | e.depends_on('a') | added | bba27a51a944e4bdbd190cb3d6fe473e4b980174617edd76ba59992510fbc7ce | assert|test_synonyms|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import pytest import numpy as np from ..expressions import parse_number, ScalarExpression, TensorExpression def test_parse_number(): """ test parse_number function """ assert parse_number(0) == pytest.approx(0) assert parse_number(1.23... | null | null | null |
zwicker-group/py-pde | train | 43 | c5e5733e3b633598a91cc0c1e7ca61e0807f1d89 | train | pde/tools/tests/test_parameters.py | train | zwicker-group/py-pde:pde/tools/tests/test_parameters.py | 19 | 4 | assert | test_parameters | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import pickle
import pytest
from ..parameters import (Parameter, DeprecatedParameter, ObsoleteParameter,
Parameterized, get_all_parameters)
def test_parameters():
""" test mixing Parameterized """
... | isinstance(str(param), str) | added | 036342d47b320b63d73776ce430f10cd0a799b7d0222a9bff5d93ba114298a5e | assert|test_parameters|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import pickle import pytest from ..parameters import (Parameter, DeprecatedParameter, ObsoleteParameter, Parameterized, get_all_parameters) def test_parameters(): """ test mixing Parameterized """ param = Parameter('... | null | null | null |
zwicker-group/py-pde | train | 43 | c5e5733e3b633598a91cc0c1e7ca61e0807f1d89 | train | pde/tools/tests/test_parameters.py | train | zwicker-group/py-pde:pde/tools/tests/test_parameters.py | 116 | 9 | pytest.raises | test_obsolete_parameter | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import pickle
import pytest
from ..parameters import (Parameter, DeprecatedParameter, ObsoleteParameter,
Parameterized, get_all_parameters)
def test_parameters():
""" test mixing Parameterized """
... | KeyError) | added | c1b2f02ff6841103c854fec44e2e84b789a0542b4867fb6e401648d498d28dff | pytest.raises|test_obsolete_parameter|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import pickle import pytest from ..parameters import (Parameter, DeprecatedParameter, ObsoleteParameter, Parameterized, get_all_parameters) def test_parameters(): """ test mixing Parameterized """ para... | null | null | null |
zwicker-group/py-pde | train | 43 | c5e5733e3b633598a91cc0c1e7ca61e0807f1d89 | train | pde/tools/tests/test_parameters.py | train | zwicker-group/py-pde:pde/tools/tests/test_parameters.py | 123 | 4 | assert | test_obsolete_parameter | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import pickle
import pytest
from ..parameters import (Parameter, DeprecatedParameter, ObsoleteParameter,
Parameterized, get_all_parameters)
def test_parameters():
""" test mixing Parameterized """
... | {'a': 1, 'b': 3} | added | d277308746a9d26b3e4abf19830a40a120fb31e68b9d8bb625564502003bb322 | assert|test_obsolete_parameter|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import pickle import pytest from ..parameters import (Parameter, DeprecatedParameter, ObsoleteParameter, Parameterized, get_all_parameters) def test_parameters(): """ test mixing Parameterized """ param = Par... | null | null | null |
zwicker-group/py-pde | train | 43 | c5e5733e3b633598a91cc0c1e7ca61e0807f1d89 | train | pde/tools/tests/test_parameters.py | train | zwicker-group/py-pde:pde/tools/tests/test_parameters.py | 133 | 8 | assert | test_get_all_parameters | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import pickle
import pytest
from ..parameters import (Parameter, DeprecatedParameter, ObsoleteParameter,
Parameterized, get_all_parameters)
def test_parameters():
""" test mixing Parameterized """
... | p2.keys() | added | c76ff84074d97fe5ed274b32638600174850cc56cdf07d49f9b8926035c6a9a2 | assert|test_get_all_parameters|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import pickle import pytest from ..parameters import (Parameter, DeprecatedParameter, ObsoleteParameter, Parameterized, get_all_parameters) def test_parameters(): """ test mixing Parameterized """ param = Par... | null | null | null |
zwicker-group/py-pde | train | 44 | f989c4573ac7ec2703ec5b525ed840bc8efdcc02 | train | pde/grids/boundaries/tests/test_axes.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes.py | 48 | 4 | assert | test_boundary_specifications | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import numpy as np
from ... import UnitGrid
from ..axis import get_boundary_axis
from ..axes import Boundaries
from ....fields import ScalarField
def test_boundaries():
""" test setting boundaries for multiple systems """
... | Boundaries.from_data(g, [{'type': 'derivative'}, {'type': 'value'}]) | modified | 5b576ed836948c0a1159f2c41e430394442621c5e6e019c3b006d7ed29ec3fc5 | assert|test_boundary_specifications|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import numpy as np from ... import UnitGrid from ..axis import get_boundary_axis from ..axes import Boundaries from ....fields import ScalarField def test_boundaries(): """ test setting boundaries for mu... | Boundaries.from_data(g, [{'derivative': 0}, {'value': 0}]) | 46 | 4 |
zwicker-group/py-pde | train | 44 | f989c4573ac7ec2703ec5b525ed840bc8efdcc02 | train | pde/grids/boundaries/tests/test_axes.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes.py | 50 | 4 | assert | test_boundary_specifications | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import numpy as np
from ... import UnitGrid
from ..axis import get_boundary_axis
from ..axes import Boundaries
from ....fields import ScalarField
def test_boundaries():
""" test setting boundaries for multiple systems """
... | Boundaries.from_data(g, [{'derivative': 0}, {'value': 0}]) | modified | aaa04c6baf0ea81cbca618306411ae1bc4fc5e8dc15af0ffa34cd2a6228a9c15 | assert|test_boundary_specifications|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import numpy as np from ... import UnitGrid from ..axis import get_boundary_axis from ..axes import Boundaries from ....fields import ScalarField def test_boundaries(): """ test setting boundaries for mu... | Boundaries.from_data(g, ['no-flux', 'value']) | 48 | 4 |
zwicker-group/py-pde | train | 44 | f989c4573ac7ec2703ec5b525ed840bc8efdcc02 | train | pde/grids/boundaries/tests/test_axes.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes.py | 52 | 4 | assert | test_boundary_specifications | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import numpy as np
from ... import UnitGrid
from ..axis import get_boundary_axis
from ..axes import Boundaries
from ....fields import ScalarField
def test_boundaries():
""" test setting boundaries for multiple systems """
... | Boundaries.from_data(g, ['no-flux', 'value']) | modified | acad1d8fbb1b194063902df85a2734d1c1e135ae703ccc3f385c2dec4381de3b | assert|test_boundary_specifications|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import numpy as np from ... import UnitGrid from ..axis import get_boundary_axis from ..axes import Boundaries from ....fields import ScalarField def test_boundaries(): """ test setting boundaries for mu... | Boundaries.from_data(g, ['neumann', 'dirichlet']) | 49 | 4 |
zwicker-group/py-pde | train | 44 | f989c4573ac7ec2703ec5b525ed840bc8efdcc02 | train | pde/grids/boundaries/tests/test_axes.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axes.py | 53 | 4 | assert | test_boundary_specifications | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import numpy as np
from ... import UnitGrid
from ..axis import get_boundary_axis
from ..axes import Boundaries
from ....fields import ScalarField
def test_boundaries():
""" test setting boundaries for multiple systems """
... | Boundaries.from_data(g, ['neumann', 'dirichlet']) | added | e9191ae0ceaa549bbffc7cb5ebe8e4d64669ba208f71159d4f129b6e01ce82c8 | assert|test_boundary_specifications|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import numpy as np from ... import UnitGrid from ..axis import get_boundary_axis from ..axes import Boundaries from ....fields import ScalarField def test_boundaries(): """ test setting boundaries for mu... | null | null | null |
zwicker-group/py-pde | train | 46 | d2eb0d1933365e1a1856e331e92fa30204e9b515 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 408 | 4 | assert_* | test_smoothing | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | f2.data) | added | f2d1f0d5ee95cf0a1b2cced5e9f333d61d0f6979bd0d76a913385f02bca85001 | assert_*|test_smoothing|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianGrid, PolarGrid,... | null | null | null |
zwicker-group/py-pde | train | 46 | d2eb0d1933365e1a1856e331e92fa30204e9b515 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 418 | 4 | assert | test_vector_from_scalars | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | 'test' | added | e557ed0d25f83f5c9d9f7a710b8418aa91bb0b708f10c4491b7e71e6a290fbd6 | assert|test_vector_from_scalars|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianGrid, Po... | null | null | null |
zwicker-group/py-pde | train | 46 | d2eb0d1933365e1a1856e331e92fa30204e9b515 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 419 | 4 | assert_* | test_vector_from_scalars | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | [[[0, 1]], [[2, 3]]]) | added | 4dcae576f795d506562bd65256af1ceec74689414d5a5d9561907ceb5bf8ea12 | assert_*|test_vector_from_scalars|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianGrid, ... | null | null | null |
zwicker-group/py-pde | train | 46 | d2eb0d1933365e1a1856e331e92fa30204e9b515 | train | pde/fields/tests/test_generic.py | train | zwicker-group/py-pde:pde/fields/tests/test_generic.py | 448 | 4 | assert_* | test_dot_product | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
from scipy import ndimage
import pytest
from .. import ScalarField, VectorField, Tensor2Field, FieldCollection
from ..base import FieldBase
from ...grids import (UnitGrid, CartesianGrid, PolarGrid, SphericalGrid,
... | expected) | added | 795e4dc6332e232fd7d0d6dae73f65166d25f8995c7df5c8135b8cd24daf96d1 | assert_*|test_dot_product|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np from scipy import ndimage import pytest from .. import ScalarField, VectorField, Tensor2Field, FieldCollection from ..base import FieldBase from ...grids import (UnitGrid, CartesianGrid, PolarGri... | null | null | null |
zwicker-group/py-pde | train | 47 | 1f14d1319d9fc7c1f3b544152be19369f5966e1c | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 162 | 8 | assert | test_add_interpolated_1d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | pytest.approx(a) | added | c1950f7cad9609088334bb3e7089b317d7bdb428f5b752e90bb7cfb040171619 | assert|test_add_interpolated_1d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.bounda... | null | null | null |
zwicker-group/py-pde | train | 47 | 1f14d1319d9fc7c1f3b544152be19369f5966e1c | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 220 | 4 | assert_* | test_from_image | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | img_data_gray.T[:, ::-1]) | added | 0dbc0fda20d4eea3b305dcb96429140f530f90a2bceb504bc65afddf7c5958af | assert_*|test_from_image|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.boundaries im... | null | null | null |
zwicker-group/py-pde | train | 47 | 1f14d1319d9fc7c1f3b544152be19369f5966e1c | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 282 | 9 | pytest.raises | test_slice_positions | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | ValueError) | added | 0e39e6b0db1621281df65efd43ddc5edd4d0c53e348bcc0cdd802ad93307b8d5 | pytest.raises|test_slice_positions|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.bou... | null | null | null |
zwicker-group/py-pde | train | 47 | 1f14d1319d9fc7c1f3b544152be19369f5966e1c | train | pde/fields/tests/test_scalar.py | test | zwicker-group/py-pde:pde/fields/tests/test_scalar.py | 308 | 4 | assert_* | test_poisson_solver_1d | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import tempfile
import numpy as np
import pytest
from .test_generic import iter_grids
from ..scalar import ScalarField
from ..base import FieldBase
from ...grids import UnitGrid, CartesianGrid, PolarGrid
from ...grids.boundaries import DomainError
from ... | 1 + 0.5 * xs**2) | added | 1bda416582119e5c85740c71bfc9953aefe1bbc1f5041287be721c226575f5fc | assert_*|test_poisson_solver_1d|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import tempfile import numpy as np import pytest from .test_generic import iter_grids from ..scalar import ScalarField from ..base import FieldBase from ...grids import UnitGrid, CartesianGrid, PolarGrid from ...grids.bounda... | null | null | null |
zwicker-group/py-pde | train | 48 | 4ae117c89180e49cbc32bbb8ed8587452127e6c4 | train | pde/grids/boundaries/tests/test_axis.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis.py | 41 | 4 | assert | test_boundary_pair | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import pytest
from ... import UnitGrid
from ..local import BCBase
from ..axis import BoundaryPair, get_boundary_axis
def test_boundary_pair():
""" test setting boundary conditions for whole axis """
g = UnitGrid([2, 3])
b ... | bc1 != bc2 and bc1 is not bc2 | added | 407eced55117497c567b47a58104936668f39ec47297f3faa5bb21d47e53e028 | assert|test_boundary_pair|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import pytest from ... import UnitGrid from ..local import BCBase from ..axis import BoundaryPair, get_boundary_axis def test_boundary_pair(): """ test setting boundary conditions for whole axis """ g = UnitGrid([... | null | null | null |
zwicker-group/py-pde | train | 48 | 4ae117c89180e49cbc32bbb8ed8587452127e6c4 | train | pde/grids/boundaries/tests/test_axis.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis.py | 46 | 4 | assert | test_boundary_pair | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import pytest
from ... import UnitGrid
from ..local import BCBase
from ..axis import BoundaryPair, get_boundary_axis
def test_boundary_pair():
""" test setting boundary conditions for whole axis """
g = UnitGrid([2, 3])
b ... | BCBase.from_data(g, 0, False, {'value': 0}) | added | 8b3f4cbc85bb7b3891e1afb95a92520a6fc235f4c72562d7cbcb973a4e95e2d3 | assert|test_boundary_pair|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import pytest from ... import UnitGrid from ..local import BCBase from ..axis import BoundaryPair, get_boundary_axis def test_boundary_pair(): """ test setting boundary conditions for whole axis """ g = UnitGrid([... | null | null | null |
zwicker-group/py-pde | train | 48 | 4ae117c89180e49cbc32bbb8ed8587452127e6c4 | train | pde/grids/boundaries/tests/test_axis.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis.py | 59 | 12 | assert | test_get_axis_boundaries | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import pytest
from ... import UnitGrid
from ..local import BCBase
from ..axis import BoundaryPair, get_boundary_axis
def test_boundary_pair():
""" test setting boundary conditions for whole axis """
g = UnitGrid([2, 3])
b ... | b.periodic | added | 6f7a7748b2f099952ca1c9bd09acaa3bf1cdb163ff349361780b98a8d8d66298 | assert|test_get_axis_boundaries|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import pytest from ... import UnitGrid from ..local import BCBase from ..axis import BoundaryPair, get_boundary_axis def test_boundary_pair(): """ test setting boundary conditions for whole axis """ g = Unit... | null | null | null |
zwicker-group/py-pde | train | 48 | 4ae117c89180e49cbc32bbb8ed8587452127e6c4 | train | pde/grids/boundaries/tests/test_axis.py | train | zwicker-group/py-pde:pde/grids/boundaries/tests/test_axis.py | 61 | 12 | assert | test_get_axis_boundaries | '''
.. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de>
'''
import itertools
import pytest
from ... import UnitGrid
from ..local import BCBase
from ..axis import BoundaryPair, get_boundary_axis
def test_boundary_pair():
""" test setting boundary conditions for whole axis """
g = UnitGrid([2, 3])
b ... | not b.periodic | added | 11a2897adcfc4566edd33c013c241f4955b940f6f49b834f21ba82f871a254d2 | assert|test_get_axis_boundaries|''' .. codeauthor:: David Zwicker <david.zwicker@ds.mpg.de> ''' import itertools import pytest from ... import UnitGrid from ..local import BCBase from ..axis import BoundaryPair, get_boundary_axis def test_boundary_pair(): """ test setting boundary conditions for whole axis """ g = Unit... | null | null | null |
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