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def rewrite_email_address(email): """ Prettify the email address (and if it's empty, skip it by returning None). """ if not email: return email = email.strip() if not email: return if email[0]=='<' and email[-1] == '>': email = email[1:-1] # If it doesn't look like em...
def depair(z): """ Pairing function inverse """ import math w = math.floor((math.sqrt(8 * z + 1) - 1)/2) t = (w**2 + w) / 2 y = int(z - t) x = int(w - y) # assert z != pair(x, y, safe=False): return x, y
def create_query_sting(param_dict): """ turns a dict into a query string :param param_dict: a dictionary :type param_dict: dict :return: a clean query string :rtype: str """ params = "&".join( [ f"{key}={value}" for key, value in param_dict.items() ] ) r...
def show_registration_disabled_collapse(n_clicks, is_open): """ Toggle the registration info div. """ if n_clicks: return not is_open return is_open
def is_tcp_rst(tcp_data): """is TCP RST?""" return tcp_data["flags"]["rst"] == 1
def helper(n, largest): """ :param n: int, :param largest: int, to find the biggest digit :return: int, the biggest digit in n Because digit < 10, this function recursively check every digit of n """ remainder = n % 10 if n < 10: # Base case! if remainder > largest: return remainder else: return larg...
def compute_num_cells(max_delta_x, pt0x, pt1x): """compute the number of blocks associated with the max_delta_x for the largest spatial step (combustion chamber) Args: max_delta_x (double): User defined maximum grid spacing. pt0x (double): x-coordinate of bottom LHS cookstove combustion chamber ...
def colorize(shape, fill, stroke, strokeWidth): """Change the color of the input shape.""" if shape is None: return None new_shape = shape.clone() new_shape.fillColor = fill if strokeWidth > 0: new_shape.strokeColor = stroke new_shape.strokeWidth = strokeWidth else: new_s...
def caseiter_to_dict(caseiter, varnames, include_errors=False): """ Retrieve the values of specified variables from cases in a CaseIterator. Returns a dict containing a list of values for each entry, keyed on variable name. Only data from cases containing ALL of the specified variables wi...
def format_args(args): """ :param args: the args to be formated :return: the args formated """ args_formated = list() args_formated.append(round(args[0], 3)) args_formated.append(round(args[1], 2)) args_formated.append(round(args[2], 5)) args_formated.append(int(args[3])) retur...
def _output_format(command): """Determine the output format for a given command.""" if 'chartjson' in command: return 'chartjson' elif 'valueset' in command: return 'valueset' return 'buildbot'
def test_sqrs(_x, _n=2): """This function""" if _x == 0 or _x == 1: return _x sqr = 1 while _n > 0: sqr = sqr * _x _n = _n - 1 return sqr
def _compare_data(stored, desired, idx=0): """Calculate the virtual to be added, modified, deleted """ add = [] modify = [] delete = [] current = 0 total_stored = len(stored) for virtual in desired: while current < total_stored and virtual[idx] > stored[current][idx]: ...
def count_a(seq): """"THis function is for counting the number of A's in the sequence""" # Counter for the As result = 0 for b in seq: if b == "A": result += 1 # Return the result return result
def remove_metadata_fields(fields): """ Strip out fields added during aggregation. """ stage = {"$project": {}} for field in fields: stage['$project'][field] = 0 return stage
def get_name_from_equivalent_ids(equivalent_ids): """find name from equivalent id dict params ------ equivalent_ids: a dictionary containing all equivalent ids of a bio-entity """ if not equivalent_ids: return None if equivalent_ids.get('bts:symbol'): return equivalent_i...
def _to_full_shapes(shapes, device_num): """Expanding batch dimension according to device_num, adapt to mindspore minddata graph solution.""" new_shapes = [] for shape in shapes: new_shape = () for i, item in enumerate(shape): if i == 0: new_shape += (item * devic...
def valid_move(moves): """ Valid Move checks if a position on the board is taken. Input: all moves Returns True if board position not taken. False if board position already taken. """ for move in reversed(moves): if moves.count(move) > 1: return False else: ...
def readout_default(parameters = None): """ This is the most basic function to read values from a set of Parameters within qcodes. Arguments: values ... List of tuples of the form: [(instance_of_control1,value1), ...] """ if parameters != None: list_of_results = li...
def get_seq_part_from_assembly( content, contig_name, start, end ): """! @brief get seq from start to end; returns modified start and end position, if contig is shorter than requested sequence """ if end > len( content[ contig_name ] ): if start < 0: return content[ contig_name ], 0, len( content[ contig_name ...
def rank(value_to_be_ranked, value_providing_rank): """ Returns the rank of ``value_to_be_ranked`` in set of values, ``values``. Works even if ``values`` is a non-orderable collection (e.g., a set). A binary search would be an optimized way of doing this if we can constrain ``values`` to be an order...
def convert_str_tags_to_list(i): """ Input: either a list, or a string of comma-separated tags. Output: If i is a list, it's returned. If i is a string, the list of tags it represents is returned (each tag is stripped of leading and trailing whitespace). """ r=[] if...
def estarmap(func, iter_, **kwargs): """ Eager version of it.starmap from itertools Note this is inefficient and should only be used when prototyping and debugging. """ return [func(*arg, **kwargs) for arg in iter_]
def find_judge(N, trust): """ Inputs: N -> int trust -> List[List[int]] Output: int """ # Your code here # base case - list is empty? if len(trust) < N - 1: return -1 # indegree ---> num of directed edges into a vertex == N-1 # outdegree ---> num of directed edge...
def ft_id_parser(description): """return a dict of {'Description':,'Id':} from raw decription str Examples. FT PROPEP 25 48 FT /FTId=PRO_0000021449. FT VARIANT 214 214 V -> I. FT /FTId=VAR_009122. FT ...
def probability_in_range(probability: float, delta: float): """Note that this check must not be used for probability densities.""" return (probability >= -delta) and (probability <= 1 + delta)
def dot(v, w): """v_1 * w_1 + ... + v_n * w_n""" return sum(v_i * w_i for v_i, w_i in zip(v, w))
def get_chunk_label(tot_minutes: int) -> str: """Returns a readable elapsed time.""" hours, minutes = divmod(tot_minutes, 60) return f"{hours:02}h:{minutes:02}m"
def equalize_string_lengths(arr, side = 'left'): """ Equalize the lengths of the string representations of the contents of the array. :param arr: :return: """ assert side in ('left', 'right') strings = [str(x) for x in arr] longest = max(len(x) for x in strings) if side=='left': ...
def extract_wikipedia_page(line): """Extracts the Wikipedia page for an entity""" if "sitelinks" in line and "enwiki" in line["sitelinks"]: return line["sitelinks"]["enwiki"]["title"].strip().replace(" ", "_") return None
def path2FileName(path): """Answer the file name part of the path. >>> path2FileName('../../aFile.pdf') 'aFile.pdf' >>> path2FileName('../../') is None # No file name True """ return path.split('/')[-1] or None
def is_float(string): """Check whether string is float. See also -------- http://stackoverflow.com/questions/736043/checking-if-a-string-can-be-converted-to-float-in-python """ try: float(string) return True except ValueError: return False
def to_text(value, encoding="utf-8"): """Convert value to unicode, default encoding is utf-8 :param value: Value to be converted :param encoding: Desired encoding """ if not value: return "" if isinstance(value, str): return value if isinstance(value, bytes): return ...
def is_valid_matrix1D(lst): """ Checks if there is at least one positive value in the given 1 dimensional list. :param lst: list of elements :return: True if at least one positive value exist otherwise false. """ for i in range(0, len(lst)): if lst[i] > 0.0: return True ...
def _xml_escape(data): """Escape &, <, >, ", ', etc. in a string of data.""" # ampersand must be replaced first from_symbols = '&><"\'' to_symbols = ('&'+s+';' for s in "amp gt lt quot apos".split()) for from_,to_ in zip(from_symbols, to_symbols): data = data.replace(from_, to_) ...
def history_ping_field_names(): """Return the field names of the packet loss stats. Returns: A tuple with 3 lists, the first with general stat names, the second with ping drop stat names, and the third with ping drop run length stat names. """ return [ "samples", ], ...
def fixHTML(text): """replaces html-markup parts on tags""" return str(text).replace("&", "&amp;") \ .replace("<", "&lt;") \ .replace(">", "&gt;")
def remarks(rmk): """Function to format remarks.""" d = {'parsed' : 'None', 'string' : 'N/A'} if rmk == 'None': return d return {'parsed' : f'RMK {rmk}', 'string' : rmk}
def compute_packet_csum(pkt): """Computes the checksum for the given GDB packet""" csum = 0 for x in pkt: csum += x csum = csum & 0xFF return csum
def swap(password, swap_type, position_x, position_y): """Swap position_x and position_y. If swap_type is 'letter' swap indices of corresponding letters. """ if swap_type == 'letter': position_x = password.index(position_x) position_y = password.index(position_y) password[position_x...
def patharg(path): """Back slashes need to be escaped in ITEM args, even in Windows paths.""" return path.replace('\\', '\\\\\\')
def max(x, y): """ ``max :: a -> a -> a`` Maximum function. """ return x if x >= y else y
def calc_iou(recs): """ recs: A tuple containing two tuples, each representing a rectangle returns: Float. The calculated intersection over union metric. """ recA, recB = recs xminA, yminA, xmaxA, ymaxA = recA areaA = (xmaxA-xminA) * (ymaxA-yminA) xminB, yminB, xmaxB, ymaxB = recB...
def get_value_in_state(key, state): """ Retrieve a potentially nested value in an object :param key: the `.` separated key (i.e: a.b.c.d) :param state: the object to access the key in :return: the value in the state """ def traverse(hierarchy, current): level = hierarchy.pop(0) ...
def chunk(l, n): """ Returns list l chunked into lists of length n """ if n < 1: n = 1 return [l[i:i+n] for i in range(0, len(l), n)]
def jars_from_output(output): """Collect jars for intellij-resolve-files from Java output.""" if output == None: return [] return [jar for jar in [output.class_jar, output.ijar, output.source_jar] if jar != None and not jar.is_source]
def sum_edge_weight(acc, w1, w2): """Sums up edge weights. This results in edge weights that are dominated by dominant figures. """ return acc + w1 + w2
def _strtobool(val): """Convert a string representation of truth to true (1) or false (0). True values are 'y', 'yes', 't', 'true', 'on', and '1'; false values are 'n', 'no', 'f', 'false', 'off', '0' and ''. Raises ValueError if 'val' is anything else. """ val = val.lower() if val in ('y',...
def Prepare_Suffix_List(suffix_list): """ Adds regular expression parts to given suffixes """ new_suffix_list = [] for suffix in suffix_list.split(): regex_suffix = r"(?<=\w)" + suffix + r"(?=\s)" new_suffix_list = new_suffix_list + [regex_suffix] return new_suffix_list
def process_predictor_args(predictors, params=None, sds=None): """Returns a predictor data structure for the given lists of predictors, params, and standard deviations. When no parameters or deviations are provided, the predictors are a simple list. When parameters and deviations are provided, the pred...
def find_letter(letters, l, index): """ Find the first occurrence of a letter in a word after a given index. Searches forward in the word after index-th letter. If no matching letter is found, search backwards for the latest occurrence before the index-th letter. :return: index of the found occurr...
def check_min_boundary_of_measurement(value, boundary): """ :return: """ if boundary is None: return None elif float(value) > float(boundary): return True else: return False
def build_bootstrap(ba, metadata): """ Helper function to construct BA action """ ba_name = ba.get('bootstrapName') ba_path_with_args = ba.get('bootstrapScript').split() ba_path = ba_path_with_args[0] ba_args = ba_path_with_args[1:] if not 's3://' in ba_path: ba_path = '{}/{}'.format(me...
def get_dict(obj): """ accept dict or querydict, return a dict (or the object, if None or neither) """ if isinstance(obj, dict): return obj if hasattr(obj, 'dict'): return obj.dict() return obj
def CalculateListAverage(values): """Computes the arithmetic mean of a list of numbers.""" values = [x for x in values if x != None] if not values: return 0 return sum(values) / float(len(values))
def chunks_to_string(chunks): """ Parameters ---------- chunks : list of strings A list of single entities in order Returns ------- string : A LaTeX-parsable string Examples -------- >>> chunks_to_string(['\\\\sum', '_', 'i', '^', 'n', 'i', '^', '2']) '\\\\s...
def grplst2str(acsiter): """ A helper function for names of Groups """ return ",".join([ac.name for ac in acsiter])
def V2lambda(V): """ Takes a neutron velocity V in m/s and converts it to lambda in angstroms """ return(3956/V)
def filter_by_attribute(data, attribute, required_key): """ Filters by attribute, if value is required_key. Example `attribute`: `category`. Example `required_key`: `Permissive`. """ return [entry for entry in data if entry.get(attribute, 'None') == required_key]
def check_obj(obj): """ Check if object exists """ if obj: return True else: return False
def rule(cond, metric="foo", increment="1"): """ A rule for the custom metric policy """ return {"metric": metric, "increment": increment, "condition": cond, "combine_op": "and" }
def values_equal(value_a, value_b, precision=0.000001): """ >>> values_equal(1.022, 1.02, precision=0.01) True >>> values_equal([1.2, 5.3, 6.8], [1.1, 5.2, 6.9], precision=0.2) True >>> values_equal(7, 5, precision=2) True >>> values_equal(1, 5.9, precision=10) True >>> values_eq...
def camel_to_space(s): """Replace low dashes with spaces. Parameters ---------- s : str String that may contain "_" characters. """ return " ".join(s.split("_"))
def _set_default_voltage_ratio( voltage_ratio: float, subcategory_id: int, type_id: int ) -> float: """Set the default voltage ratio for semiconductors. :param voltage_ratio: the current voltage ratio. :param subcategory_id: the subcategory ID of the semiconductor with missing defaults. :pa...
def fourSum(nums, target): """ :type nums: List[int] :type target: int :rtype: List[List[int]] """ nums.sort() sum_target = [] first = 0 while first < len(nums)-3: sec = first + 1 while sec < len(nums)-2: third = sec+1 fourth = len(nums)-1 ...
def primeiroElemento(lista: list) -> str: """ Devolve primeiro elemento de uma string Parameters ---------- lista : list lista de strings Returns ------- string : str primeira string da lista """ try: return lista[0] except: ...
def _InsertQuotes(string, left_index, right_index): """Insert quotes in the passed string. Args: string: A string in which quotes will be inserted. left_index: An integer representing the index where starting quote will be inserted. right_index: An integer representing the index where closi...
def get_client_options(): """Returns mock options for TargetClient.create""" return { "client": "testingclient", "organization_id": "11D1C9L459CE0AD80A495CBE@AdobeOrg" }
def upconvert_to_list(list_or_dict): """ Packed CWL workflow inputs/outputs are structured as lists of dicts (e.g. [{'id': 'input_file', 'type': 'File'},...]). Unpacked workflows may have dicts (e.g. {'input_file': 'File'}. This function converts the dicts into lists of dicts or returns the list ...
def set_input_container(_container, cfg): """Save the input for the container in the configurations.""" if not _container: return False if _container.exists(): cfg["container"]["input"] = str(_container) return True return False
def dict_reformat_keys(obj, format_func): """Convert a dictionary's keys from one string format to another. Parameters ---------- obj : dict A dictionary with keys that need to be reformatted format_func : function Will execute on each key on the dict Returns ------- di...
def fibonacci(elements_num): """ Calculating fibonacci sequence """ sequence = [] for i in range(1, elements_num + 1): if i <= 2: sequence.append(1) continue next_num = sequence[-2] + sequence[-1] sequence.append(next_num) return sequence
def inverse(a, n): """Find the inverse of a modulo n if it exists""" t = 0 newt = 1 r = n newr = a while newr != 0: quotient = int((r - (r % newr)) / newr) tt = t t = newt newt = tt - quotient * newt rr = r r = newr newr = rr - quotient * n...
def local_temp(A, albedo, T, q=30): """Calculate local temperature experienced by a particular daisy type or ground cover. This is a simplified version of the original. q*(A-albedo)+T Arguments --------- A : float Planetary albedo alpha : float Albedo of daisy type T : f...
def _f(fpath, dir_): """ Helper function for contains_parent_dir function. """ return fpath.startswith(dir_)
def convert_frequency_counts_to_rank_frequency(frequency_counts): """ Input a a frequency counts distribution frequency_counts[j] = # of tokens that have a frequency count of j Output a frequency distribution of how many words of each rank appeared rank_frequency[i] = # of occurences of ith ranked word """ rank...
def two_to_n_mod_10_to_m(n, m): """Successive squaring. Very fast and handles very large numbers. 1. Rewrite 2^n so that n is a sum of powers of two. 2. Create a list of powers 2^(2^i) mod 10^m, by repeatedly squaring the prior result. 3. Combine, with multiplication mod 10^m, the powers in the list th...
def location_to_field_association(loc): """Helper to map location to VTK/Enum value""" if loc == "Point": return 0 if loc == "Cell": return 1 if loc == "Field": return 3 return 4
def display_name_to_class(value): """ Converts an aggregation display name to a string that is usable as a CSS class name """ return value.replace(" ", "_").lower()
def _inclusive_range(start, stop=None, step=1): """return a range i <= j <= k if k is not provided, return a range containing only i. step is also supported and defaults to 1 """ if stop is None: stop = start stop += 1 return range(start, stop, step)
def fatorial(num): """Fazer o fatorial do numero. Args: param [num]: o numero a ser calculado. opcao[s]: mostra o processo do calculo. Returns: Retorna o fatorial. """ f=1 for n in range(num,0,-1): f*=n return f
def has_entry_by_id(id_key, id_key_value, dict): """return true if the dict entry has matching key value""" for value in dict.values(): if value[id_key] == id_key_value: return True return False
def combination_matches(combination, match_combinations): """ Checks if the given combination is matches for any of the given combination globs, being those a set of combinations where if a key is missing, it's considered matching (key1=2, key2=3) would match the combination match: (key2=3...
def merge_dicts(*dicts): """ Merges two or more dicts. If there are duplicate keys, later dict arguments take precedence. Null, empty, or non-dict arguments are qiuetly skipped. :param dicts: :return: """ res = {} for d in dicts: if not d or type(d) != dict: continue...
def alloc_lists(num_alloc): """allocates space for a ``list`` of lists""" return [[] for _ in range(num_alloc)]
def true_bin_repr(A: int, num_bits=4) -> int: """For negative numbers, noop for positive numbers since they're already in proper form Args: A: num_bits: Returns: Examples: >>> bin(true_bin_repr(~int("0001", 2), num_bits=4)) '0b1110' >>> true_bin_repr(~int("0001...
def value_len_eq_2(value): """ Validates that the length of the paramter is equal to 2. Assumes that value is an interable. Returns: int: 0 (FAIL) if length != 2, otherwise 1 (PASS). """ if len(value) != 2: return 0 return 1
def extract_lmjrect_pascalvoc(label_dict): """Extracts box coordinates from lmjson labels to pascalvoc Args: label_dict (dict): lmjson label dictionary Returns: list: Box coordinates in Pascalvoc [x_min, y_min, x_max, y_max] """ x_min = label_dict["points"][0][0] ...
def complement(c): """ :param c: Nucleotide to get complement of :return: character representing the complement of 'c' """ base_pairs = { 'A': 'T', 'C': 'G', 'G': 'C', 'T': 'A', 'N': 'N' } try: return base_pairs[c.upper()] except KeyError: ...
def compute_binhash(s): """Compute a hash used in BIN files FNV-1a hash, on lowercased input """ h = 0x811c9dc5 for b in s.encode('ascii').lower(): h = ((h ^ b) * 0x01000193) % 0x100000000 return h
def search_genre(plot): """ >>> search_genre(['get up', 'discussion']) ['drama', 'drama'] """ genre = ['drama', 'drama'] return genre
def add_tbd_repos(tbd_repos): """ return the list of dummy entries for some repos, the information will be filled up later. """ tbd_rows = [] if len(tbd_repos) > 0: for repo_url in tbd_repos: if '/' in repo_url: tbd_rows.append({ 'repo_url'...
def text_transform(ftpp, filename, content): """ If filename is *rss.xml*, replaces the string *__BLOG_ROOT__* by *self._root_web*. @param ftpp object FolderTransferFTP @param filename filename @param content content of the file @return new conte...
def _get_temperature_from_buffer(data): """This function reads the first two bytes of data and returns the temperature in C by using the following function: T = =46.82 + (172.72 * (ST/2^16)) where ST is the value from the sensor """ unadjusted = -46.85 + 175.72 * ((data[0] << 8) + (data[1] & 0xf...
def consensus_decision(consensus): """ Given a consensus dict, return list of candidates to delete/archive. """ delete = [] archive = [] for k, v in consensus.items(): tags = v['tags'] if 'delete' in tags or 'rfi' in tags: delete.append(k) elif 'archive' in tags ...
def plus(a, b): """add vectors, return a + b """ return [a[i] + b[i] for i in range(len(a))]
def binary(n,count=16,reverse=False): """ Display n in binary (only difference from built-in `bin` is that this function returns a fixed width string and can optionally be reversed >>> binary(6789) '0001101010000101' >>> binary(6789,8) '10000101' >>> ...
def get_available_port(curr_port, ports_dict): """Method to recursively check for available ports in provided ports_dict :param curr_port: port to be replaced :type curr_port: str :param ports_dict: dict to check available ports :type ports_dict: dict :return: next available port :rt...
def get_circle_points(xy, radius): """ Returns tuples of (x0, y0), (x1, y1) for a circle centered at x, y with radius Arguments: xy: tuple of x, y coordinates radius: radius of circle to draw Returns: [(x0, y0), (x1, y1)] for bounding box of circle centered at x, y """ x, y...
def _check_values(set1: set, set2: set) -> int: """This checks how many of the values present inside of the first set are in the second set.""" match = 0 if set1.issuperset(set2): match += 1 for item in set2: if set1.issuperset({item}): match += 1 return match