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def part1(data): """Return how many passports have all info except possibly cid.""" expected = {'byr', 'iyr', 'eyr', 'hgt', 'hcl', 'ecl', 'pid'} fields, valid = set(), 0 for line in data.splitlines(): if line: # non-empty line fields.update(field[:3] for field in line.split()) ...
def split(value, key): """ Returns the value turned into a list. """ return value.split(key)
def search(text, pattern): """ Takes a string and searches if the `pattern` is substring within `text`. :param text: A string that will be searched. :param pattern: A string that will be searched as a substring within `text`. :rtype: The indices of all occurences of where the su...
def getname(obj): """Get the default name for a test.""" try: return obj.__name__ except AttributeError: return repr(obj)
def reverse_mac(rmac): """Change LE order to BE.""" if len(rmac) != 12: return None return ( rmac[10:12] + rmac[8:10] + rmac[6:8] + rmac[4:6] + rmac[2:4] + rmac[0:2] )
def degree_sequence_regular(n, k): """ Generates a degree sequnce following k-regular distribution :param n: Number of vertices. :param k: The parameter k for k-regular distribution :return: A list containing n integers representing degrees of vertices following k-regular distribution. """ ...
def norm(vector): """Makes a vector unit length. If original vLen is 0, leave vector as [0,...]""" vLen = sum([e**2 for e in vector])**(1/2) if vLen != 0: return [e/vLen for e in vector] else: return [0 for e in vector]
def get_tld_from_domain_name(domain_name): """ :param domain_name: the domain name from which to get the TLD from :return: Returns the TLD from a domain name (google.com would return 'com') """ return domain_name.split('.')[-1]
def versionate(s): """ Assumes s is a slug-type string. Returns another slug-type string with a number at the the end. Useful when you want unique slugs that may have been hashed to the same string. """ words = s.split("-") if len(words) > 1: try: # Check if the ...
def zagzig(du): """ Put the coefficients in the right order """ map = [[0, 1, 5, 6, 14, 15, 27, 28], [2, 4, 7, 13, 16, 26, 29, 42], [3, 8, 12, 17, 25, 30, 41, 43], [9, 11, 18, 24, 31, 40, 44, 53], [10, 19, 23, 32, 39, 45, 52, 54], [20, 22, 33, 38, 46, 51, 5...
def get_novel_smiles(new_unique_smiles, reference_unique_smiles): """Get novel smiles which do not appear in the reference set. Parameters ---------- new_unique_smiles : list of str List of SMILES from which we want to identify novel ones reference_unique_smiles : list of str List o...
def l_to_d(td): """Transform a list of Key/Value dicts to a single dict """ return { i['Key']: i['Value'] for i in td }
def tfds_split_for_mode(mode): """Return the TFDS split to use for a given input dataset.""" if mode == 'test': # The labels for the real ImageNet test set were never released. So we # follow the standard (although admitted confusing) practice of obtain # "test set" accuracy numbers from the ImageNet va...
def _generate_graph_state(frame): """Returns a game state as a graph Args: frame (dict) : Dict output of a frame generated from the DemoParser class Returns: A dict with keys "T", "CT" and "Global", where each entry is a vector. Global vector is CT + T concatenated """ return {"ct"...
def extract_output(line): """ Extract the index of the tree and the matched tree fragment from a line of Tregex outout. """ line = line.strip() index = None fragment = None for k, c in enumerate(line): if c == ':': index = line[:k] fragment = line[(k+1):].stri...
def get_value(header_dict, header_name, default=None, strip_value=""): """ Return last header value, or default value (None) If strip_value, remove strip_value (e.g., 'keep-alive') if it occurs in addition to other values """ if header_name in header_dict: value = header_dict[header_name][-1] ...
def merge_similarities(oldsims, newsims, clip=None): """ Merge two precomputed similarity lists, truncating the result to clip most similar items. """ if oldsims is None: result = newsims or [] elif newsims is None: result = oldsims else: result = sorted(oldsims + newsims...
def parsever(apiver): """Parse a string representing an api version. :param apiver: a string representing an api version :return: a tuple containing the major and minor version numbers """ maj, min = apiver.split('.') return int(maj), int(min)
def merge_pixels(pixel1, pixel2): """ Merge two R or G or B pixels using 4 least significant bits. INPUT: A string tuple (e.g. ("00101010")), Another string tuple (e.g. ("00101010")) OUTPUT: An integer tuple with the two RGB values merged 00100010 """ merged_pixel = (pixel1[:4] + pix...
def _add_to_metadata(metadata, name, value): """ Add the name value pair to the metadata dict Args: metadata (dict): a dictionary containing the metadata name (string): the dictionary key value: the value to add Returns: dict: the new metadata dictionary """ if...
def define_logistic_regression(n_classes, l1_reg=0, l2_reg=0): """Shortcut to build the list of layer definitions (a single layer, in this case) for a logistic regression classifier. Parameters ---------- n_classes : int Number of classes to calculate probabilities for l1_reg, l2_reg : ...
def filter_phrases(input_str, filter_list): """ Filters out phrases/words from the input string :param input_str: String to be processed. :return: string with phrases from filter_list removed. """ for phrase in filter_list: input_str = input_str.replace(phrase,'') return input_str
def go_up(x: int, y: int) -> tuple: """ Go 1 unit in positive y-direction :param x: x-coordinate of the node :param y: y-coordinate of the node :return: new coordinates of the node after moving a unit in the positive y-direction """ return x, y + 1
def extract_keys(keys, dic, drop=True): """ Extract keys from dictionary and return a dictionary with the extracted values. If key is not included in the dictionary, it will also be absent from the output. """ out = {} for k in keys: try: if drop: ou...
def calculate_ir(p, q, vr, vj): """ Compute ir from power flows and voltages """ ir = (q*vj+p*vr)/(vj**2 + vr**2) return ir
def is_hashable(obj: object) -> bool: """Return whether an object is hashable.""" try: hash(obj) except Exception: return False else: return True
def get_omega_k_0(**cosmo): """'Spatial curvature density' omega_k_0 for a cosmology (if needed). If omega_k_0 is specified, return it. Otherwise return: 1.0 - omega_M_0 - omega_lambda_0 """ if 'omega_k_0' in cosmo: omega_k_0 = cosmo['omega_k_0'] else: omega_k_0 = 1. - cos...
def strip_ddp_state_dict(state_dict): """ Workaround the fact that DistributedDataParallel prepends 'module.' to every key, but the sampler models will not be wrapped in DistributedDataParallel. (Solution from PyTorch forums.)""" clean_state_dict = type(state_dict)() for k, v in state_dict.items(): ...
def x_range(a): """ Get the valid x range (x_min,x_max) for the given [a] parameter. """ return (4 * a**2 - a**3) / 16, a / 4
def _GetDockerImageName(image_name, tag=None): """Get a Docker image name to use. Args: image_name: an image name. tag: an image tag (optional). Returns: a Docker image name. """ if tag: image_name = image_name.split(':', 2)[0] + ':' + tag return image_name
def set_id_type( id: int, # noqa type: int, # noqa ) -> int: """ Replaces the type-part in an ID with the given ``type``. Parameters ---------- id, type: int Returns ------- int """ return ((id >> 16) << 16) + (type << 11) + (id & 2047)
def get_split_ind(seq, N): """seq is a list of words. Return the index into seq such that len(' '.join(seq[:ind])<=N """ sLen = 0 # todo: use Alex's xrange pattern from the cbook for efficiency for (word, ind) in zip(seq, range(len(seq))): sLen += len(word) + 1 # +1 to account for the len(' '...
def query_fragility_curve(f_curve, depth): """ Query the fragility curve. """ if depth < 0: return 0 for item in f_curve: if item['depth_lower_m'] <= depth < item['depth_upper_m']: return item['fragility'] else: continue print('fragility curve f...
def set_voltage(channel: int, value: float): """ Sets voltage on channel to the value. """ return f"VSET{channel}:{value}"
def _merge_peaks(l): """ Merge signals if the difference of Nuclear to cytoplasmic ratio is 1 """ idx = [] while len(l)>0: first, *rest = l first = set(first) lf = -1 while len(first)>lf: lf = len(first) rest2 = [] for r in rest: ...
def avg(l): """Compute the average of a list""" return sum(l) / len(l)
def _get_cased(case_sensitive, *args): """ Get the cased versions of the provided strings if applicable. Args: case_sensitive: If False, then returns lowercase versions of all strings. args: The strings to get appropriately cased versions of. Returns: An iterable of...
def _calculate_texture_sim(ri, rj): """Calculate texture similarity using histogram intersection""" return sum([min(a, b) for a, b in zip(ri["texture_hist"], rj["texture_hist"])])
def _to_str(t) -> str: """ Transform binary into string. """ return t.decode("utf-8")
def update_options(*dict_args): """ Given any number of dicts, shallow copy and merge into a new dict, precedence goes to key value pairs in latter dicts. """ result = {} for dictionary in dict_args: result.update(dictionary) return result
def sext_24(value): """Sign-extended 24 bit number. """ if value & 0x800000: return 0xff000000 | value return value
def lib2name(lib): """Convert an OS dependent library name to the base name:: libfoo.so.0.1 => foo foo.dll => foo """ if lib.startswith('lib'): lib = lib[4:] return lib.split('.',1)[0]
def roundToNearest(number, nearest): """ Rounds a decimal number to the closest value, nearest, given Arguments: number: [float] the number to be rounded nearest: [float] the number to be rouned to Returns: rounded: [float] the rounded number """ A = 1/nearest rounde...
def is_sorted(list_): """ Return True iff list_ is in non-decreasing order. @param list list_: list to inspect @rtype bool: >>> is_sorted([1, 3, 5]) True >>> is_sorted([3, 1, 5]) False """ for j in range(1, len(list_)): if list_[j - 1] > list_[j]: return Fal...
def parse_ifname(ifname): """ parse interface name(<name>.<index>) """ items = ifname.split(".", 2) if len(items) == 1: return ifname, "0" return items[0], items[1]
def ibits(ival, ipos, ilen): """Same usage as Fortran ibits function.""" ones = ((1 << ilen)-1) return (ival & (ones << ipos)) >> ipos
def calculate_weights(counts, total): """ Modifies the counts dictionary in place to produce fractional weights. Each weight is the ratio of this keyword to the total size of the body of keywords. """ for k in counts.keys(): counts[k] /= total return counts
def none_if_na(s): """Return None if s == 'N/A'. Return s otherwise.""" return None if s == 'N/A' else s
def countSelectedPairs(all_selected_idx, print_msg = True, string = 'Major merger cut: '): """ Function to count selected pairs from the list of lists outputted by ball tree @all_selected_idx :: """ count_selected_pairs = 0 for j, mm in enumerate(all_selected_idx): if len(...
def ABCDFrequencyList_to_HFrequencyList(ABCD_frequency_list): """ Converts ABCD parameters into h-parameters. ABCD-parameters should be in the form [[f,A,B,C,D],...] Returns data in the form [[f,h11,h12,h21,h22],...] """ h_frequency_list=[] for row in ABCD_frequency_list[:]: [frequency,A...
def largest_element(a,loc=False): """ Return the largest element of a sequence a. """ maxval = a[0] indicii = 0 for i in range(1, len(a)): if a[i] > maxval: maxval = a[i] indicii = i large = sorted(a) index = len(a) if loc == True: #return large[ind...
def pitremove(np, input, output): """ command: pitremove -z dem.tif -fel demfel.tif, demfile: input elevation grid, felfile: output elevations with pits filled """ pitremove = "mpirun -np {} pitremove -z {} -fel {}".format( np, input, output) return pitremove
def DM_Sum(DMvec, qlist): """Helper function to matrix dot product the DM matrix with a qvector Assumes that DMVec is the same length as qlist """ sum = 0 for j in range(len(DMvec)): sum += DMvec[j]*qlist[j] return sum
def get_rnx_band_from_freq(frequency): """ Obtain the frequency band >>> get_rnx_band_from_freq(1575420030.0) 1 >>> get_rnx_band_from_freq(1600875010.0) 1 >>> get_rnx_band_from_freq(1176450050.0) 5 >>> get_rnx_band_from_freq(1561097980.0) 2 """ # Backwards compatibility...
def ncartesian(L): """ Computes the number of cartesian functions for a given angular momentum. Parameters ---------- L : int The input angular momentum Returns ------- ncartesian : int The number of cartesian functions """ return int((L + 1) * (L + 2) / 2)
def IndexOfMin(inputList): """ Return the index of the min value in the supplied list """ assert(len(inputList) > 0) index = 0 minVal = inputList[0] for i, val in enumerate(inputList[1:]): if val < minVal: minVal = val index = i + 1 return index
def doc_missing(obj): """ Check *obj* for a non-empty __doc__ element """ if not hasattr(obj, '__doc__') or obj.__doc__ is None: return True else: return False
def min_bounded(table, coin_denminations, i, j): """ we have the case where if anything = 0 it means we can't make that value of j additionally when checking in the same row to extend the solution, should check if the value is 0 if so we can't just +1 to it if both value are 0, return 0 else if...
def whitespace(line): """Return index of first non whitespace character on a line.""" i = 0 for char in line: if char != " ": break i += 1 return i
def swap_dictionary(dictionary): """Swap keys for values in the given dictionary >>> swap_dictionary({'one': 1})[1] == 'one' True """ if dictionary is None: return None return {v: k for k, v in dictionary.items()}
def _cdp_split_reads_for_header(split_align_dict, split_align_count_dict, seq_dict): """ Dict -->Even split read aligned counts, so total reads aligned = read count in original seq file {header:split_count} """ header_split_count = {} for header, sRNA_dict in split_align_dict.items(): ...
def encode_string(ls): """ Question 7.12: Implement run-length encoding for strings """ result = [] last = ls[0] count = 1 for elt in ls[1:]: if elt != last: result.append(str(count)) result.append(last) count = 1 else: coun...
def is_balanced(node): """ 4.4 Check Balanced: Implement a function to check if a binary tree is balanced. For the purposes of this question, a balanced tree is defined to be a tree such that the heights of the two subtrees of any node never differ by more than one """ def max_and_min_heights(no...
def retsup_cmp(a, b): """ :param a, b: :return: """ ret = b[1] - a[1] if ret == 0: al = a[0] bl = b[0] if al == bl: ret = 0 elif al < bl: ret = -1 else: ret = 1 return ret
def intervals_union(S): """Union of intervals :param S: list of pairs (low, high) defining intervals [low, high) :returns: ordered list of disjoint intervals with the same union as S :complexity: O(n log n) """ E = [(low, -1) for (low, high) in S] E += [(high, +1) for (low, high) in S] ...
def force_force_list(data): """Wrap data in list. We need to define this awkardly named method because DoJSON's method force_list returns tuples or None instead of lists. """ if data is None: return [] elif not isinstance(data, (list, tuple, set)): return [data] elif isinstan...
def _select_rej_stat(rej_stat, ewmean, ewsdev, uwmean, uwsdev, uwmed, uwmad): """ Select and return the desired rejection statistic. """ if rej_stat == 'ew': return ewmean, ewsdev if rej_stat == 'uw': return uwmean, uwsdev if rej_stat == 'ro': return uwmed, uwmad rai...
def isCSERelative(uri : str) -> bool: """ Check whether a URI is CSE-Relative. """ return uri is not None and uri[0] != '/'
def fuzzyMatch(string1, string2): """Compare the English character content of two strings.""" replacements = {"1": "one", "2": "two", "3": "three", "4": "four", "5": "five", "6": "six", "7": "seven", "8": "eight", "9": "nine", "gonna": "going to"} whiteout = '.,"\'!?/$()' string1 = s...
def normalize_prefix(prefix): """ Removes slashes from a URL path prefix. :param str prefix: :rtype: str """ if prefix and prefix.startswith("/"): prefix = prefix[1:] if prefix and prefix.endswith("/"): prefix = prefix[:-1] return prefix
def conflict(prec, other_prec): """Whether the ranges `prec` and `other_prec` overlap.""" a, b = prec c, d = other_prec return (a <= c and c <= b) or (c <= a and a <= d)
def inherits_from(obj, a_class): """ Returns booleanType response for class inheritance test Args: obj: object to evaluate a_class: class value for testing """ if (type(obj) != a_class): return isinstance(obj, a_class) else: return False
def _get_paths(base_path): """ A service endpoints base path is typically something like /preview/mlflow/experiment. We should register paths like /api/2.0/preview/mlflow/experiment and /ajax-api/2.0/preview/mlflow/experiment in the Flask router. """ return ['/api/2.0{}'.format(base_path), '/aja...
def process_url(url): """ Process url to get to correct page """ url += '&showAllReviews=true' return url
def build_about_page_url_from_id(user_id): """ >>> build_about_page_url_from_id(123) 'https://mbasic.facebook.com/profile.php?v=info&id=123' """ return "https://mbasic.facebook.com/profile.php?v=info&id={0}". \ format(user_id)
def chk_for_gz(filenm): """ Checks for .gz extension to an input filename and returns file Also parses the ~ if given Parameters ---------- filenm : string Filename to query Returns ------- filenm+XX : string Returns in this order: i. Input filename if it exists ...
def call_instance_method(instance, name, args, kwargs): """indirect caller for instance methods for multiprocessing Args: instance: the instance to call method with name (str): method name to call args (tuple or None): arguments to be passed to getattr(instance, name) kwargs (di...
def get_options(options): """ Get options for dcc.Dropdown from a list of options """ opts = [] for opt in options: opts.append({'label': opt.title(), 'value': opt}) return opts
def calc_internal_hours(entries): """ Calculates internal utilizable hours from an array of entry dictionaries """ internal_hours = 0.0 for entry in entries: if entry['project_name'][:22] == "TTS Acq / Internal Acq" and not entry['billable']: internal_hours = internal_hours + flo...
def readAttributes(serverName, itemId, attributeIds, startDate, endDate): """Reads the specified attributes for the given item over a time range. Attributes and their IDs are defined in the OPC-HDA specification, and can be discovered by calling system.opchda.getAttributes(). Args: serverN...
def require_channel(slack_event_json): """ Require a channel be present in the JSON from the Events API :params dict slack_event_json: The JSON from the events API :rtype: bool (False) or str """ # Get the channel, else false so we # don't reply to mention without channel info # eg: me...
def kalkulasi_waktu( kecepatan_akhir: float, kecepatan_awal: float, percepatan: float ) -> float: """ Menghitung waktu >>> kalkulasi_waktu(10, 22, 2.4) -5.0 >>> kalkulasi_waktu(9, 0, 7.2) 1.25 """ return (kecepatan_akhir - kecepatan_awal) / percepatan
def calculate_frip(nreads, noverlaps): """ calculate FRiP score from nreads and noverlaps """ return( float(noverlaps) / nreads )
def get_components_with_cve(components): """Get all components with CVE record(s).""" result = [] for component in components: assert "security" in component cve_items = component["security"] for cve_item in cve_items: if "CVE" in cve_item: result.append(...
def find_index(p, xs): """Returns the index of the first element of the list which matches the predicate, or -1 if no element matches. Acts as a transducer if a transformer is given in list position""" for i in (i for i, x in enumerate(xs) if p(x)): return i
def should_render_json(accepts, content_type): """Check accepts and content_type to see if we should render JSON.""" return 'application/json' in accepts or content_type == 'application/json'
def largest_element(a, loc = False): """ Return the largest element of a sequence a. """ max = a[0] maxelem = 0 try: for i in range(0, len(a)): if a[i] > max: max = a[i] maxelem = i if (loc): return (max, maxelem) return...
def random_str(length=8): """ Return random string of specified length """ import string import random choose_from = string.ascii_letters + string.ascii_uppercase + string.digits return ''.join(random.choice(choose_from) for _ in range(length))
def sent_padding(tokens_list, SEQ_LEN): """ Padding the token list with '-1' up to SEQ_LEN """ final_list = tokens_list for i in range(len(tokens_list), SEQ_LEN): final_list.append(-1) return final_list
def isValidChannelName(channelName): """ Determines whether the given channel name is in a valid format. """ if channelName[0] != "#": return False for char in "\x07 ,?*": # \x07, space, and comma are explicitly denied by RFC; * and ? make matching a channel name difficult if char in channelName: return Fal...
def create_smifile_from_string(smiles='', filename=''): """ Writes a SMILES string to a file. :param smiles: SMILES Code of the molecule. :param filename: Filename (.smi) :return: """ f = open(filename, 'w') f.write(smiles) f.close() return 0
def age_name( agenamelist, prefixes=["Lower", "Middle", "Upper"], suffixes=["Stage", "Series"] ): """ Condenses an agename list to a specific agename, given a subset of ambiguous_names. Parameters ---------- agenamelist : :class:`list` List of name components (i.e. :code:`[Eon, Era,...
def get_fg_tone(value): """Returns a foreground black-white color in the range 0-24""" return '38;5;%d' % (232 + int(value))
def pruner(data): """ Prune the data to remove the data that is not needed. :param data: The data to be pruned. :type data: dict :return: The pruned data. :rtype: dict """ new_data = {} for k, v in data.items(): if isinstance(v, dict): v = pruner(v) if not...
def get_multi_values(columns_to_insert,insert_values_dict_lst): """ returns the values for the placeholders in query. :param columns_to_insert: :param insert_values_dict_lst: :return: """ values = [] for value_dict in insert_values_dict_lst: for col in columns_to_insert: ...
def getCommands(args): """Split (if needed) and obtain the list of commands that were sent into Skelebot""" commands = [] command = [] for arg in args: if arg == "+": commands.append(command) command = [] else: command.append(arg) commands.append(...
def distance(x1,y1,x2,y2): """ Compute the distance between two points """ dist=((x1-x2)**2+(y1-y2)**2)**0.5 return dist
def sort_states_response(response_list): """Sorting response since on Travis order of breakdown response list is different""" return sorted(response_list, key=lambda k: k['fips'])
def lowest_uniq_timestamp(used_timestamps, timestamp): """resolve duplicate timestamps by appending a decimal 1234, 1234 -> 1234.1, 1234.2""" timestamp = timestamp.split('.')[0] nonce = 0 # first try 152323423 before 152323423.0 if timestamp not in used_timestamps: return timestamp ne...
def sigma_z(state, site): """ Returns `(sign, state)` where `sign` is 1 or -1 if the `site`th bit of the int `state` is 0 or 1 respectively. Can also accept numpy arrays of ints and gives numpy arrays back """ return (-1.0) ** ((state >> site) & 1), state