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Microsatellite expansions are the leading cause of numerous neurodegenerative disorders . Here we demonstrate that GGGGCC and CAG microsatellite repeat RNAs associated with C9orf72 in amyotrophic lateral sclerosis/frontotemporal dementia and with polyglutamine diseases , respectively , localize to neuritic granules tha... | Genes contain instructions to build proteins , but these instructions are often interrupted by stretches of DNA that do not code for protein . Typically the entire length of a gene is copied to produce an intermediate molecule of RNA , which is processed to remove the non-coding regions before being translated to make ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology"
] | 2015 | GGGGCC microsatellite RNA is neuritically localized, induces branching defects, and perturbs transport granule function |
LAMP1 and LAMP2 proteins are highly abundant , ubiquitous , mammalian proteins that line the lysosome limiting membrane , and protect it from lysosomal hydrolase action . LAMP2 deficiency causes Danon’s disease , an X-linked hypertrophic cardiomyopathy . LAMP2 is needed for chaperone-mediated autophagy , and its expres... | Living cells contain many membrane-bound compartments surrounded by a gel-like substance called the cytoplasm . Lysosomes are compartments found in most animal cells , which contain enzymes that can break down virtually all kinds of biological molecules . Cell biologists around the world use two proteins called LAMP1 a... | [
"Abstract",
"Introduction",
"Results",
"and",
"discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"cell",
"biology",
"short",
"report"
] | 2016 | Lysosomal membrane glycoproteins bind cholesterol and contribute to lysosomal cholesterol export |
Ribosomes can stall during translation due to defects in the mRNA template or translation machinery , leading to the production of incomplete proteins . The Ribosome-associated Quality control Complex ( RQC ) engages stalled ribosomes and targets nascent polypeptides for proteasomal degradation . However , how each RQC... | Cells make proteins by reading instructions encoded in molecules called messenger RNAs . Structures called ribosomes move along the messenger RNAs and translate the coded instructions to build new proteins from building blocks known as amino acids . Normally , a ribosome will encounter a stop signal on the messenger RN... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression",
"biochemistry",
"and",
"chemical",
"biology"
] | 2017 | In vitro analysis of RQC activities provides insights into the mechanism and function of CAT tailing |
Immunotherapy , represented by immune checkpoint inhibitors ( ICI ) , is transforming the treatment of cancer . However , only a small percentage of patients show response to ICI , and there is an unmet need for biomarkers that will identify patients who are more likely to respond to immunotherapy . The fundamental bas... | In the last decade a new kind of cancer therapy , called immunotherapy , has changed how doctors treat cancer patients . These therapies mean that previously incurable cancers , including some skin and lung cancers , can now sometimes be cured . Immunotherapy does this by activating the patient’s own immune system so t... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"genetics",
"and",
"genomics",
"cancer",
"biology"
] | 2019 | Antigen presentation and tumor immunogenicity in cancer immunotherapy response prediction |
Regulation of cytoplasmic dynein's motor activity is essential for diverse eukaryotic functions , including cell division , intracellular transport , and brain development . The dynein regulator Lis1 is known to keep dynein bound to microtubules; however , how this is accomplished mechanistically remains unknown . We h... | Cells use motor proteins to move ‘cargo’ from one location to another inside the cell . This cargo can range in size from a single macromolecule to something as large as the nucleus of the cell . A motor protein called dynein is the largest and least understood of the motor proteins found in cells . Dynein molecules wo... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2014 | Lis1 regulates dynein by sterically blocking its mechanochemical cycle |
To avoid mutations in the genome , DNA replication is generally followed by DNA mismatch repair ( MMR ) . MMR starts when a MutS homolog recognizes a mismatch and undergoes an ATP-dependent transformation to an elusive sliding clamp state . How this transient state promotes MutL homolog recruitment and activation of re... | The genetic code of DNA is written using four letters: “A” , “C” , “T” , and “G” . Molecules of DNA form a double helix in which the letters in the two opposing strands pair up in a specific manner—“A” pairs with “T” , and “C” pairs with “G” . A cell must replicate its DNA before it divides , and sometimes the wrong DN... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression",
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2015 | MutS/MutL crystal structure reveals that the MutS sliding clamp loads MutL onto DNA |
The in vivo roles for even the most intensely studied microRNAs remain poorly defined . Here , analysis of mouse models revealed that let-7 , a large and ancient microRNA family , performs tumor suppressive roles at the expense of regeneration . Too little or too much let-7 resulted in compromised protection against ca... | The development of animals is guided by the expression of certain genes at critical moments . Many different mechanisms control development; in one of them , the expression of genes can be decreased by molecules called microRNAs . In particular , the group of microRNAs called let-7 has been intensively studied in round... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"stem",
"cells",
"and",
"regenerative",
"medicine",
"cell",
"biology"
] | 2015 | Precise let-7 expression levels balance organ regeneration against tumor suppression |
Kinesin-1 is a dimeric motor that transports cargo along microtubules , taking 8 . 2-nm steps in a hand-over-hand fashion . The ATP hydrolysis cycles of its two heads are maintained out of phase by a series of gating mechanisms , which lead to processive runs averaging ∼1 μm . A key structural element for inter-head co... | In cells , molecules are moved from one location to another by motor proteins . Kinesins are a large family of such motors that transport their cargos along long filaments known as microtubules . Most kinesin molecules are formed from two identical protein chains . Each chain has a motor region at one end ( called the ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2015 | Examining kinesin processivity within a general gating framework |
Poor study methodology leads to biased measurement of treatment effects in preclinical research . We used available sunitinib preclinical studies to evaluate relationships between study design and experimental tumor volume effect sizes . We identified published animal efficacy experiments where sunitinib monotherapy wa... | Developing a new drug can take years , partly because preclinical research on non-human animals is required before any clinical trials with humans can take place . Nevertheless , only a fraction of cancer drugs that are put into clinical trials after showing promising results in preclinical animal studies end up provin... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"epidemiology",
"and",
"global",
"health",
"medicine"
] | 2015 | A meta-analysis of threats to valid clinical inference in preclinical research of sunitinib |
Mammalian spermatozoa gain competence to fertilize an oocyte as they travel through the female reproductive tract . This process is accompanied by an elevation of sperm intracellular calcium and a membrane hyperpolarization . The latter is evoked by K+ efflux; however , the molecular identity of the potassium channel o... | The sperm cells that are released into the female reproductive tract when a mammal ejaculates , are not capable of fertilizing an egg right away , so they must go through a process called maturation . The early stages of this process involve interactions with the seminal fluid that increase the motility of the sperm ce... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology",
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2013 | Slo1 is the principal potassium channel of human spermatozoa |
All organisms live within a given thermal range , but little is known about the mechanisms setting the limits of this range . We uncovered cellular features exhibiting signature changes at thermal limits in Caenorhabditis elegans embryos . These included changes in embryo size and shape , which were also observed in Ca... | An organism can thrive within a certain range of temperatures , beyond which it is less able to grow and reproduce . Different species are adapted to live in environments of different temperatures and this influences where on the planet they can be found . Researchers have suggested that the optimum temperature range f... | [
"Abstract",
"Introduction",
"Results",
"and",
"discussion",
"Materials",
"and",
"methods"
] | [
"short",
"report",
"cell",
"biology"
] | 2015 | Cellular hallmarks reveal restricted aerobic metabolism at thermal limits |
Ornithischian dinosaurs were ecologically prominent herbivores of the Mesozoic Era that achieved a global distribution by the onset of the Cretaceous . The ornithischian body plan is aberrant relative to other ornithodiran clades , and crucial details of their early evolution remain obscure . We present a new , fully a... | The fossilised skeletons of long extinct dinosaurs are more than just stones . By comparing these remains to their living relatives such as birds and crocodiles , palaeontologists can reveal how dinosaurs grew , moved , ate and socialised . Previous research indicates that dinosaurs were likely warm-blooded and also mo... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"evolutionary",
"biology"
] | 2021 | A new Heterodontosaurus specimen elucidates the unique ventilatory macroevolution of ornithischian dinosaurs |
Adenylate cyclases convert intra- and extracellular stimuli into a second messenger cAMP signal . Many bacterial and most eukaryotic ACs possess membrane anchors with six transmembrane spans . We replaced the anchor of the AC Rv1625c by the quorum-sensing receptor from Vibrio harveyi which has an identical 6TM design a... | Cells are surrounded by a membrane that separates the inside of the cell from the external environment . To communicate information across the cell membrane , cells often employ a relay system . In this system , receptor proteins on the surface of the cells sense information about the environment and trigger the produc... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"cell",
"biology"
] | 2016 | Regulation by the quorum sensor from Vibrio indicates a receptor function for the membrane anchors of adenylate cyclases |
The Late Jurassic ‘Solnhofen Limestones’ are famous for their exceptionally preserved fossils , including the urvogel Archaeopteryx , which has played a pivotal role in the discussion of bird origins . Here we describe a new , non-archaeopterygid avialan from the Lower Tithonian Mörnsheim Formation of the Solnhofen Arc... | The origin of birds and their flight has been heavily debated in the field of evolutionary biology since the late nineteenth century . Birds are the only living descendants of dinosaurs and , for paleontologists , the famous Archaeopteryx has played a pivotal role in this discussion . Living during the Jurassic period ... | [
"Abstract",
"Introduction",
"Discussion",
"Materials",
"and",
"methods"
] | [
"evolutionary",
"biology"
] | 2019 | A non-archaeopterygid avialan theropod from the Late Jurassic of southern Germany |
Photorhabdus is a highly effective insect pathogen and symbiont of insecticidal nematodes . To exert its potent insecticidal effects , it elaborates a myriad of toxins and small molecule effectors . Among these , the Photorhabdus Virulence Cassettes ( PVCs ) represent an elegant self-contained delivery mechanism for di... | Photorhabdus are the only known group of non-marine bacteria that can produce their own light . These organisms prey on insects , which then glow in the dark once infected . The group also has an unusual weapon system formed of miniscule needle-like structures that can be sent out in the environment . These ‘Photorhabd... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"microbiology",
"and",
"infectious",
"disease",
"genetics",
"and",
"genomics"
] | 2019 | The Photorhabdus asymbiotica virulence cassettes deliver protein effectors directly into target eukaryotic cells |
Enduring memories of sensory cues associated with drug intake drive addiction . It is well known that stressful experiences increase addiction vulnerability . However , it is not clear how repeated stress promotes learning of cue-drug associations , as repeated stress generally impairs learning and memory processes unr... | Daily stress increases the likelihood that people who take drugs will become addicted . A very early step in the development of addiction is learning that certain people , places , or paraphernalia are associated with obtaining drugs . These ‘cues’ – drug dealers , bars , cigarette advertisements , etc . – become power... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2016 | Repeated social defeat stress enhances glutamatergic synaptic plasticity in the VTA and cocaine place conditioning |
DNA re-identification is used for a broad suite of applications , ranging from cell line authentication to forensics . However , current re-identification schemes suffer from high latency and limited access . Here , we describe a rapid , inexpensive , and portable strategy to robustly re-identify human DNA called 'MinI... | The human genome represents the complete set of genetic information needed to make a person . DNA sequencing technologies used to study genomes have become much faster , cheaper and more accessible over recent years . This has enabled them to be used more regularly in various fields like precision medicine , in researc... | [
"Abstract",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology",
"tools",
"and",
"resources",
"genetics",
"and",
"genomics"
] | 2017 | Rapid re-identification of human samples using portable DNA sequencing |
Receptor-ligand pairs are ordinarily thought to interact through a lock and key mechanism , where a unique molecular conformation is formed upon binding . Contrary to this paradigm , cellulosomal cohesin-dockerin ( Coh-Doc ) pairs are believed to interact through redundant dual binding modes consisting of two distinct ... | Some bacteria use cellulose , the main component of plant cell walls , as a food source . The enzymes that break down cellulose are anchored onto a protein scaffold in a structure called the cellulosome on the bacteria’s surface . This anchoring occurs through an interaction between receptor proteins known as ‘cohesin’... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2015 | Resolving dual binding conformations of cellulosome cohesin-dockerin complexes using single-molecule force spectroscopy |
We report the discovery of a simple environmental sensing mechanism for biofilm formation in the bacterium Bacillus subtilis that operates without the involvement of a dedicated RNA or protein . Certain serine codons , the four TCN codons , in the gene for the biofilm repressor SinR caused a lowering of SinR levels und... | Bacteria use several different mechanisms to recognize and respond to changes in their environment . Protein sensors , for example , relay signals from the cell surface to target molecules within the cell . Additionally , RNA sensors can respond to internal levels of chemicals by regulating the expression of genes . No... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"microbiology",
"and",
"infectious",
"disease"
] | 2013 | A serine sensor for multicellularity in a bacterium |
Mammalian oocytes are arrested in the dictyate stage of meiotic prophase I for long periods of time , during which the high concentration of the p53 family member TAp63α sensitizes them to DNA damage-induced apoptosis . TAp63α is kept in an inactive and exclusively dimeric state but undergoes rapid phosphorylation-indu... | The irradiation and chemotherapy drugs that are used to destroy cancer cells also damage healthy cells . Germ cells – from which egg cells and sperm cells develop – are particularly vulnerable as they contain sensitive quality control mechanisms that kill any cell that contain damaged DNA . Consequently , after survivi... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology",
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2016 | Quality control in oocytes by p63 is based on a spring-loaded activation mechanism on the molecular and cellular level |
Both pathogen- and tissue damage-associated molecular patterns induce inflammation through toll-like receptors ( TLRs ) , while sialic acid-binding immunoglobulin superfamily lectin receptors ( Siglecs ) provide negative regulation . Here we report extensive and direct interactions between these pattern recognition rec... | Many living things have an immune system that is able to detect invading bacteria , viruses and other pathogens and trigger a response targeted against the threat before it causes lasting damage . Cells employ a number of different receptors that can detect these pathogens or the molecules that they produce . In animal... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"immunology",
"and",
"inflammation"
] | 2014 | Broad and direct interaction between TLR and Siglec families of pattern recognition receptors and its regulation by Neu1 |
One reported mechanism for morphine activation of dopamine ( DA ) neurons of the ventral tegmental area ( VTA ) is the disinhibition model of VTA-DA neurons . Morphine inhibits GABA inhibitory neurons , which shifts the balance between inhibitory and excitatory input to VTA-DA neurons in favor of excitation and then le... | Morphine is one of the most commonly used drugs for the treatment of severe pain . It is derived from opium , which is extracted from poppies , and binds to the same receptors in the brain as the body's own naturally produced painkillers . As well as providing pain relief , morphine can act directly on the brain's rewa... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2015 | Morphine disinhibits glutamatergic input to VTA dopamine neurons and promotes dopamine neuron excitation |
Chronic critical illness is a global clinical issue affecting millions of sepsis survivors annually . Survivors report chronic skeletal muscle weakness and development of new functional limitations that persist for years . To delineate mechanisms of sepsis-induced chronic weakness , we first surpassed a critical barrie... | Sepsis is a life-threatening condition that occurs when a local infection spreads to the bloodstream and the body responds in such an exaggerated way that organs become damaged . Patients often require longs stays in intensive care units , and upon discharge experience chronic physical weakness and fatigue for several ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"medicine",
"immunology",
"and",
"inflammation"
] | 2019 | Chronic muscle weakness and mitochondrial dysfunction in the absence of sustained atrophy in a preclinical sepsis model |
Strong kinetochore-microtubule attachments are essential for faithful segregation of sister chromatids during mitosis . The Dam1 and Ndc80 complexes are the main microtubule binding components of the Saccharomyces cerevisiae kinetochore . Cooperation between these two complexes enhances kinetochore-microtubule coupling... | The genetic material inside yeast , human and other eukaryotic cells is stored within structures called chromosomes . Every time a cell divides to make two “daughter” cells , all the chromosomes in the cell must be copied and then separated into two equal sets , with each set delivered to a different daughter cell . If... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"cell",
"biology"
] | 2017 | The Ndc80 complex bridges two Dam1 complex rings |
The σ subunit of bacterial RNA polymerase ( RNAP ) confers on the enzyme the ability to initiate promoter-specific transcription . Although σ factors are generally classified as initiation factors , σ can also remain associated with , and modulate the behavior of , RNAP during elongation . Here we establish that the pr... | Proteins are made following instructions that are encoded by sections of DNA called genes . In the first step of protein production , an enzyme called RNA polymerase uses the gene as a template to make molecules of messenger ribonucleic acid ( mRNA ) . This process—known as transcription—starts when RNA polymerase bind... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression",
"microbiology",
"and",
"infectious",
"disease"
] | 2015 | The primary σ factor in Escherichia coli can access the transcription elongation complex from solution in vivo |
Neurons in the hippocampus and adjacent brain areas show a large diversity in their tuning to location and head direction , and the underlying circuit mechanisms are not yet resolved . In particular , it is unclear why certain cell types are selective to one spatial variable , but invariant to another . For example , p... | Knowing where you are never hurts , be it during a holiday in New York or on a hiking trip in the Alps . Our sense of location seems to depend on a structure deep within the brain called the hippocampus , and its neighbor , the entorhinal cortex . Studies in rodents have shown that these areas act a little like an in-b... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2018 | Learning place cells, grid cells and invariances with excitatory and inhibitory plasticity |
Despite numerous studies , there is little agreement about what brain changes accompany motor sequence learning , partly because of a general publication bias that favors novel results . We therefore decided to systematically reinvestigate proposed functional magnetic resonance imaging correlates of motor learning in a... | It has famously been claimed that it takes 10 , 000 hours to become an expert at something . But while most of us will never become concert pianists , we can all learn new motor skills and improve existing ones – from touch-typing to tennis – by practicing . What happens in the brain to produce these improvements in pe... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2020 | A critical re-evaluation of fMRI signatures of motor sequence learning |
A core prediction of the vesicular transport model is that COPI vesicles are responsible for trafficking anterograde cargoes forward . In this study , we test this prediction by examining the properties and requirements of inter-Golgi transport within fused cells , which requires mobile carriers in order for exchange o... | All eukaryotic cells contain an organelle called the Golgi apparatus , which consists of a series of four to six flattened structures called cisternae . Proteins that are intended for secretion from the cell , or proteins that go on to become part of the cell membrane , must pass through the Golgi , where they undergo ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology"
] | 2013 | Inter-Golgi transport mediated by COPI-containing vesicles carrying small cargoes |
Identification of the host genetic factors that contribute to variation in vaccine responsiveness may uncover important mechanisms affecting vaccine efficacy . We carried out an integrative , longitudinal study combining genetic , transcriptional , and immunologic data in humans given seasonal influenza vaccine . We id... | Vaccines increase resistance to disease by priming the immune system to respond to specific viruses or microorganisms . By presenting a weakened ( or dead ) form of a pathogen , or its toxins or surface proteins , to the immune system , vaccines trigger the production of antibodies against the virus or microorganism . ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"genetics",
"and",
"genomics"
] | 2013 | Integrative genomic analysis of the human immune response to influenza vaccination |
Susceptibility to cancer is heritable , but much of this heritability remains unexplained . Some ‘missing’ heritability may be mediated by epigenetic changes in the parental germ line that do not involve transmission of genetic variants from parent to offspring . We report that deletion of the chromatin regulator Kdm6a... | Many diseases , such as certain cancers , run in families . Often , this is because several related individuals inherit a version of a gene that is faulty and causes the condition . But in a number of families with high rates of cancer , scientists are unable to pinpoint such disease-causing gene versions . Instead , i... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression"
] | 2019 | Intergenerational epigenetic inheritance of cancer susceptibility in mammals |
Protein–protein interactions are fundamental to many biological processes . Experimental screens have identified tens of thousands of interactions , and structural biology has provided detailed functional insight for select 3D protein complexes . An alternative rich source of information about protein interactions is t... | DNA is often referred to as the ‘blueprint of life’ , as this molecule contains the instructions that are required to build a living organism from a single cell . But these instructions largely play out through the proteins that DNA encodes; and most proteins do not work alone . Instead they come together in different ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2014 | Sequence co-evolution gives 3D contacts and structures of protein complexes |
Animals can learn causal relationships between pairs of stimuli separated in time and this ability depends on the hippocampus . Such learning is believed to emerge from alterations in network connectivity , but large-scale connectivity is difficult to measure directly , especially during learning . Here , we show that ... | Ivan Pavlov famously discovered that dogs would salivate upon hearing a bell that had previously been used to signal food , even when there was no food present . This ability to connect events that occur close together in time is known as associative learning . But how is it supported within the brain ? In the late 194... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2014 | CA1 cell activity sequences emerge after reorganization of network correlation structure during associative learning |
The protective immunity afforded by CD8+ T cells against blood-stage malaria remains controversial because no MHC class I molecules are displayed on parasite-infected human erythrocytes . We recently reported that rodent malaria parasites infect erythroblasts that express major histocompatibility complex ( MHC ) class ... | The immune system consists of several different types of cell that work together to prevent infection and disease . For example , immune cells called cytotoxic CD8+ T cells kill tumor cells or other cells that are infected . To do so , the CD8+ T cells must recognize certain molecules on the surface of the tumor or inf... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"microbiology",
"and",
"infectious",
"disease",
"immunology",
"and",
"inflammation"
] | 2015 | Cytotoxic activities of CD8+ T cells collaborate with macrophages to protect against blood-stage murine malaria |
An ‘interactome’ screen of all Drosophila cell-surface and secreted proteins containing immunoglobulin superfamily ( IgSF ) domains discovered a network formed by paralogs of Beaten Path ( Beat ) and Sidestep ( Side ) , a ligand-receptor pair that is central to motor axon guidance . Here we describe a new method for in... | Within every organ of the body , cells must be able to recognise and communicate with one another in order to work together to perform a particular role . Each cell has a specific protein on its surface that acts like a molecular identity card , and which can form weak bonds with a complementary protein on another cell... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2017 | Deconstruction of the beaten Path-Sidestep interaction network provides insights into neuromuscular system development |
Many species perform rapid limb movements as part of their elaborate courtship displays . However , because muscle performance is constrained by trade-offs between contraction speed and force , it is unclear how animals evolve the ability to produce both unusually fast appendage movement and limb force needed for locom... | Many animals court mates and fight with rivals by performing physically elaborate and showy displays . From male fiddler crabs waving their claws to attract females , to the leaping dances of whooping cranes , these displays often involve remarkably fast limb movements . However , in many cases it is puzzling how anima... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"ecology",
"neuroscience"
] | 2016 | Select forelimb muscles have evolved superfast contractile speed to support acrobatic social displays |
Microbial community structure and function rely on complex interactions whose underlying molecular mechanisms are poorly understood . To investigate these interactions in a simple microbiome , we introduced E . coli into an experimental community based on a cheese rind and identified the differences in E . coli’s genet... | Microorganisms live almost everywhere on Earth . Whether it is rainforest soil or human skin , each environment hosts a unique community of microbes , referred to as its microbiome . There can be upwards of hundreds of species in a single microbiome , and these species can interact in a variety of ways; some cooperate ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"microbiology",
"and",
"infectious",
"disease"
] | 2018 | Changes in the genetic requirements for microbial interactions with increasing community complexity |
Dense connectomic mapping of neuronal circuits is limited by the time and effort required to analyze 3D electron microscopy ( EM ) datasets . Algorithms designed to automate image segmentation suffer from substantial error rates and require significant manual error correction . Any improvement in segmentation error rat... | The brain consists of billions of neurons that are connected into many different circuits . Mapping the connections between these neurons could help researchers to understand how the nervous system works . A method commonly used to do so is to preserve samples of brain tissue in chemical fixatives , and then image thin... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2015 | Extracellular space preservation aids the connectomic analysis of neural circuits |
Maintenance of a quiescent and organotypically-differentiated layer of blood vessel-lining endothelial cells ( EC ) is vital for human health . Yet , the molecular mechanisms of vascular quiescence remain largely elusive . Here we identify the genome-wide transcriptomic program controlling the acquisition of quiescence... | The vascular system is made up of vessels including arteries , capillaries and veins that carry blood throughout the body . The inner surfaces of these blood vessels are lined with a thin layer of cells , called endothelial cells , which form a barrier and a communicating interface between the circulation and the surro... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"developmental",
"biology",
"computational",
"and",
"systems",
"biology"
] | 2018 | The transcriptomic and epigenetic map of vascular quiescence in the continuous lung endothelium |
Centrioles organise centrosomes and template cilia and flagella . Several centriole and centrosome proteins have been linked to microcephaly ( MCPH ) , a neuro-developmental disease associated with small brain size . CPAP ( MCPH6 ) and STIL ( MCPH7 ) are required for centriole assembly , but it is unclear how mutations... | Organisms—and individual tissues—grow and develop by dividing their cells . However , the process of cell division does not have to be symmetric , and the fates of the cells can be very different if cellular contents , including RNAs or proteins , are exclusively retained in the ‘mother’ or passed to her ‘daughter’ . O... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology",
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2013 | Crystal structures of the CPAP/STIL complex reveal its role in centriole assembly and human microcephaly |
Cancer cells demand excessive nutrients to support their proliferation but how cancer cells sense and promote growth in the nutrient favorable conditions remain incompletely understood . Epidemiological studies have indicated that obesity is a risk factor for various types of cancers . Feeding Drosophila a high dietary... | Around the world , obesity has become a much more common condition . It is a serious health concern , which can increase a person's risk of developing type 2 diabetes , heart disease and certain types of cancer . People who develop type 2 diabetes become insensitive to a hormone called insulin . This hormone normally h... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"short",
"report",
"cell",
"biology"
] | 2015 | Salt-inducible kinases mediate nutrient-sensing to link dietary sugar and tumorigenesis in Drosophila |
A loss of the checkpoint kinase ataxia telangiectasia mutated ( ATM ) leads to impairments in the DNA damage response , and in humans causes cerebellar neurodegeneration , and an increased risk of cancer . A loss of ATM is also associated with increased protein aggregation . The relevance and characteristics of this ag... | Cells are constantly perceiving and responding to changes in their surroundings , and challenging conditions such as extreme heat or toxic chemicals can put cells under stress . When this happens , protein production can be affected . Proteins are long chains of chemical building blocks called amino acids , and they ca... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology",
"genetics",
"and",
"genomics"
] | 2022 | Targeting DNA topoisomerases or checkpoint kinases results in an overload of chaperone systems, triggering aggregation of a metastable subproteome |
Stress is known to exert its detrimental effects not only by enhancing fear , but also by impairing its extinction . However , in earlier studies stress exposure preceded both processes . Thus , compared to unstressed animals , stressed animals had to extinguish fear memories that were strengthened by prior exposure to... | Patients with stress-related psychiatric disorders experience debilitating emotional symptoms , including excessive fear that they are unable to control . Decades of research have shown that such disorders have opposite effects on two key structures in the brain . Normally , a region called the amygdala helps to form f... | [
"Abstract",
"Introduction",
"Results",
"Materials",
"and",
"methods"
] | [
"short",
"report",
"neuroscience"
] | 2018 | Extinction recall of fear memories formed before stress is not affected despite higher theta activity in the amygdala |
Insects find food and mates by navigating odorant plumes that can be highly intermittent , with intensities and durations that vary rapidly over orders of magnitude . Much is known about olfactory responses to pulses and steps , but it remains unclear how olfactory receptor neurons ( ORNs ) detect the intensity and tim... | Insects follow odor trails carried by the wind to find mates and sources of food . The turbulent motion of the air means that these odors tend to arrive in whiffs with varying intensities and durations , which makes it difficult to distinguish them . Insects use sensory cells called olfactory receptor neurons on their ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"computational",
"and",
"systems",
"biology",
"neuroscience"
] | 2017 | Olfactory receptor neurons use gain control and complementary kinetics to encode intermittent odorant stimuli |
Neurons face unique challenges of transporting nascent autophagic vacuoles ( AVs ) from distal axons toward the soma , where mature lysosomes are mainly located . Autophagy defects have been linked to Alzheimer’s disease ( AD ) . However , the mechanisms underlying altered autophagy remain unknown . Here , we demonstra... | Alzheimer’s disease is the result of protein fragments called amyloid-β peptides accumulating in the brain and forming clumps . These protein “aggregates” disrupt cellular activities and cause serious problems . To combat this process , healthy cells use a process called autophagy to destroy aggregated proteins . The a... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Material",
"and",
"methods"
] | [
"cell",
"biology",
"neuroscience"
] | 2017 | Impaired retrograde transport of axonal autophagosomes contributes to autophagic stress in Alzheimer’s disease neurons |
Microdosing is the practice of regularly using low doses of psychedelic drugs . Anecdotal reports suggest that microdosing enhances well-being and cognition; however , such accounts are potentially biased by the placebo effect . This study used a ‘self-blinding’ citizen science initiative , where participants were give... | Psychedelic psychotherapy , therapy enhanced with psychedelic drugs such as LSD or psilocybin ( the active ingredient of ‘magic mushrooms’ ) , has been suggested to improve psychological well-being . For this reason , trials on psychedelic therapy for the treatment of depression , addiction and other conditions are ong... | [
"Abstract",
"Introduction",
"Materials",
"and",
"methods",
"Results",
"Discussion"
] | [
"medicine",
"neuroscience"
] | 2021 | Self-blinding citizen science to explore psychedelic microdosing |
Viral infection is usually studied at the population level by averaging over millions of cells . However , infection at the single-cell level is highly heterogeneous , with most infected cells giving rise to no or few viral progeny while some cells produce thousands . Analysis of Herpes Simplex virus 1 ( HSV-1 ) infect... | Herpes simplex virus 1 , or HSV-1 , is a virus that infects most of the human population . In many people , the virus stays dormant in nerve cells , but in some individuals , it can ‘wake up’ regularly and cause painful facial lesions known as cold sores . In very few cases , the virus can enter the brain and become li... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"computational",
"and",
"systems",
"biology",
"microbiology",
"and",
"infectious",
"disease"
] | 2019 | HSV-1 single-cell analysis reveals the activation of anti-viral and developmental programs in distinct sub-populations |
Antigenic variation in the human malaria parasite Plasmodium falciparum involves sequential and mutually exclusive expression of members of the var multi-gene family and appears to follow a non-random pattern . In this study , using a detailed in vitro gene transcription analysis of the culture-adapted HB3 strain of P ... | Our ability to acquire immunity to a disease depends on our immune system learning to recognise foreign molecules—called antigens—that are specific to the disease-causing virus , bacterium or parasite . However , some pathogens , such as the malaria-causing parasite Plasmodium falciparum , get around this defence throu... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"microbiology",
"and",
"infectious",
"disease"
] | 2013 | The antigenic switching network of Plasmodium falciparum and its implications for the immuno-epidemiology of malaria |
Competition among sperm to fertilize oocytes is a ubiquitous feature of sexual reproduction as well as a profoundly important aspect of sexual selection . However , little is known about the cellular mechanisms sperm use to gain competitive advantage or how these mechanisms are regulated genetically . In this study , w... | The ornate feathers of a peacock and the antlers of a stag are both traits that have evolved because they help a male to outcompete his rivals and mate with more females . Similarly , in species where each female mates with multiple males , a male can improve his reproductive success if his sperm outcompetes the other ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology"
] | 2015 | COMP-1 promotes competitive advantage of nematode sperm |
Animals move by adaptively coordinating the sequential activation of muscles . The circuit mechanisms underlying coordinated locomotion are poorly understood . Here , we report on a novel circuit for the propagation of waves of muscle contraction , using the peristaltic locomotion of Drosophila larvae as a model system... | Rhythmic movements such as walking and swimming require the coordinated contraction of many different muscles . Throughout the animal kingdom , from insects to mammals , animals possess specialized circuits of neurons that are responsible for producing these patterns of muscle contraction . These circuits are known as ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2016 | A circuit mechanism for the propagation of waves of muscle contraction in Drosophila |
Release factors RF1 and RF2 promote hydrolysis of peptidyl-tRNA during translation termination . The GTPase RF3 promotes recycling of RF1 and RF2 . Using single molecule FRET and biochemical assays , we show that ribosome termination complexes that carry two factors , RF1–RF3 or RF2–RF3 , are dynamic and fluctuate betw... | Inside cells , molecular machines called ribosomes make proteins using messenger RNA as a template . However , the template contains more than just the information needed to create the protein . A ‘stop codon’ in the mRNA marks where the ribosome should stop . When this is reached a group of proteins called release fac... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2018 | Dynamics of ribosomes and release factors during translation termination in E. coli |
Pseudogenes are thought to be inactive gene sequences , but recent evidence of extensive pseudogene transcription raised the question of potential function . Here we discover and characterize the sets of mouse lncRNAs induced by inflammatory signaling via TNFα . TNFα regulates hundreds of lncRNAs , including 54 pseudog... | The simplest account of gene expression is that DNA is transcribed into messenger RNA , which is then translated into a protein . However , not all genes encode proteins; for some it is the RNA molecule itself that is the end product . Many of these ‘non-coding RNAs’ are thought to be involved in regulating the express... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression"
] | 2013 | A mammalian pseudogene lncRNA at the interface of inflammation and anti-inflammatory therapeutics |
Interprotein electron transfer underpins the essential processes of life and relies on the formation of specific , yet transient protein-protein interactions . In biological systems , the detoxification of sulfite is catalyzed by the sulfite-oxidizing enzymes ( SOEs ) , which interact with an electron acceptor for cata... | A key feature of many important chemical reactions in cells is the transfer of particles called electrons from one molecule to another . The sulfite oxidizing enzymes ( or SOEs ) are a group of enzymes that are found in many organisms . These enzymes convert sulfite , which is a very reactive compound that can damage c... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2015 | Structural basis of interprotein electron transfer in bacterial sulfite oxidation |
Previously , we reported that long-term memory ( LTM ) in Aplysia can be reinstated by truncated ( partial ) training following its disruption by reconsolidation blockade and inhibition of PKM ( Chen et al . , 2014 ) . Here , we report that LTM can be induced by partial training after disruption of original consolidati... | The formation of long-term memory depends on new proteins being made in the brain . These new proteins are used partly to build the new connections among neurons that essentially store the memory , and must be made within a critical period of time . Experiments on animals have found that new proteins must be made durin... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2017 | Role of protein synthesis and DNA methylation in the consolidation and maintenance of long-term memory in Aplysia |
Piezo1 ion channels mediate the conversion of mechanical forces into electrical signals and are critical for responsiveness to touch in metazoans . The apparent mechanical sensitivity of Piezo1 varies substantially across cellular environments , stimulating methods and protocols , raising the fundamental questions of w... | Piezo ion channels are proteins that are embedded in the cell membranes of many types of tissue , including the heart , lung , skin and kidney . These proteins are essential for many biological processes , including sensing gentle touches and ensuring that blood vessels develop properly . When stimulated by mechanical ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"physics",
"of",
"living",
"systems",
"neuroscience"
] | 2015 | Mechanical sensitivity of Piezo1 ion channels can be tuned by cellular membrane tension |
In a dynamic environment an organism has to constantly adjust ongoing behavior to adapt to a given context . This process requires continuous monitoring of ongoing behavior to provide its meaningful interpretation . The caudate nucleus is known to have a role in behavioral monitoring , but the nature of these signals d... | The ability to adapt behavior in a changing environment is a hallmark of intelligent systems . From adjusting our driving speed to match road conditions to responding to a last-minute change of plans , mental flexibility underpins much of our day-to-day functioning . To perform optimally , an animal must continuously m... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2014 | Interpretive monitoring in the caudate nucleus |
The pioneer factor hypothesis ( PFH ) states that pioneer factors ( PFs ) are a subclass of transcription factors ( TFs ) that bind to and open inaccessible sites and then recruit non-pioneer factors ( non-PFs ) that activate batteries of silent genes . The PFH predicts that ectopic gene activation requires the sequent... | Cells only use a fraction of their genetic information to make the proteins they need . The rest is carefully packaged away and tightly bundled in structures called nucleosomes . This physically shields the DNA from being accessed by transcription factors – the molecular actors that can read genes and kickstart the pro... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression",
"genetics",
"and",
"genomics"
] | 2022 | A test of the pioneer factor hypothesis using ectopic liver gene activation |
Many cell-intrinsic mechanisms have been shown to regulate neuronal subtype specification in the mammalian neocortex . However , how much cell environment is crucial for subtype determination still remained unclear . Here , we show that knockdown of Protocadherin20 ( Pcdh20 ) , which is expressed in post-migratory neur... | The outer surface of the brain ( the neocortex ) in mammals is formed out of neurons arranged into layers . These layers are laid down during embryonic development , and each layer has characteristic mix of distinct subtypes of neurons that have different forms and sizes . Previous evidence suggests that neurons that a... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"developmental",
"biology",
"neuroscience"
] | 2016 | Identity of neocortical layer 4 neurons is specified through correct positioning into the cortex |
RNA-catalyzed RNA replication is widely believed to have supported a primordial biology . However , RNA catalysis is dependent upon RNA folding , and this yields structures that can block replication of such RNAs . To address this apparent paradox , we have re-examined the building blocks used for RNA replication . We ... | Life as we know it relies on three types of molecules: DNA , which stores genetic information; proteins that carry out the chemical reactions necessary for life; and RNA , which relays information between the two . However , some scientists think that before life adopted DNA and proteins , it relied primarily on RNA . ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology"
] | 2018 | Ribozyme-catalysed RNA synthesis using triplet building blocks |
FcγRIIB binding to its ligand suppresses immune cell activation . A single-nucleotide polymorphic ( SNP ) change , I232T , in the transmembrane ( TM ) domain of FcγRIIB loses its suppressive function , which is clinically associated with systemic lupus erythematosus ( SLE ) . Previously , we reported that I232T tilts F... | Left unchecked the immune system can cause devastating damage to healthy tissue . To prevent this from happening , immune cells have built-in off switches that dampen their activation . One such switch is a protein called FcγRIIB that sits on the outer surface of immune cells and binds to proteins known as antibodies ,... | [
"Abstract",
"Introduction",
"Results",
"and",
"discussion",
"Materials",
"and",
"methods"
] | [
"short",
"report",
"structural",
"biology",
"and",
"molecular",
"biophysics",
"immunology",
"and",
"inflammation"
] | 2019 | FcγRIIB-I232T polymorphic change allosterically suppresses ligand binding |
Changes in glutamatergic synaptic strength in brain are dependent on AMPA-type glutamate receptor ( AMPAR ) recycling , which is assumed to occur through a single local pathway . In this study , we present evidence that AMPAR recycling occurs through different pathways regulated by synaptic activity . Without synaptic ... | Cells called neurons transmit information around the brain in the form of electrical signals . At a junction between two neurons—called a synapse—an electrical signal triggers the release of small molecules called neurotransmitters . These molecules travel across the gap between the two neurons and trigger a new electr... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology",
"neuroscience"
] | 2015 | Synaptic activity regulates AMPA receptor trafficking through different recycling pathways |
The mechanoreceptive sensory hair cells in the inner ear are selectively vulnerable to numerous genetic and environmental insults . In mammals , hair cells lack regenerative capacity , and their death leads to permanent hearing loss and vestibular dysfunction . Their paucity and inaccessibility has limited the search f... | Worldwide , hearing loss is the most common loss of sensation . Most cases of hearing loss are due to the death of specialized hair cells found deep inside the ear . These hair cells convert sounds into nerve impulses which can be understood by the brain . Hair cells naturally degrade as part of aging and can be damage... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"stem",
"cells",
"and",
"regenerative",
"medicine",
"developmental",
"biology"
] | 2020 | Generation of inner ear hair cells by direct lineage conversion of primary somatic cells |
Spatial attention changes the sampling of visual space . Behavioral studies suggest that feature-based attention modulates this resampling to optimize the attended feature's sampling . We investigate this hypothesis by estimating spatial sampling in visual cortex while independently varying both feature-based and spati... | Much like digital cameras record images using a grid of tiny pixels , our own visual experience results from the activity of many neurons , each with its own receptive field . A neuron’s receptive field is the area of visual space – the scene in front of our eyes – to which that neuron responds . But whereas digital pi... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2018 | Spatial sampling in human visual cortex is modulated by both spatial and feature-based attention |
The success of antimicrobial treatment is threatened by the evolution of drug resistance . Population genetic models are an important tool in mitigating that threat . However , most such models consider resistance emergence via a single mutational step . Here , we assembled experimental evidence that drug resistance ev... | The rise in antibiotic resistance is threatening our ability to treat bacterial infections . Bacteria often evolve resistance by acquiring new genetic mutations during the treatment period . Understanding how resistance emerges and spreads through a bacterial population is crucial to prevent antibiotic drugs from faili... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"evolutionary",
"biology"
] | 2021 | Multi-step vs. single-step resistance evolution under different drugs, pharmacokinetics, and treatment regimens |
Genomic imprinting is an epigenetic phenomenon causing parent-of-origin specific differential expression of maternally and paternally inherited alleles . While many imprinted genes have been identified in plants , the functional roles of most of them are unknown . In this study , we systematically examine the functiona... | When plants and animals reproduce sexually , their offspring inherit two copies of every gene , one from each parent , which are arranged in two sets of structures called chromosomes . In some tissues , one gene copy may be switched off—through a process called ‘genomic imprinting’—while the other copy remains active .... | [
"Abstract",
"Introduction",
"Results",
"and",
"discussion",
"Material",
"and",
"methods"
] | [
"plant",
"biology",
"developmental",
"biology",
"short",
"report"
] | 2015 | Paternally expressed imprinted genes establish postzygotic hybridization barriers in Arabidopsis thaliana |
Activation of the mechanistic/mammalian target of rapamycin ( mTOR ) kinase in models of acute and chronic pain is strongly implicated in mediating enhanced translation and hyperalgesia . However , the molecular mechanisms by which mTOR regulates nociception remain unclear . Here we show that deletion of the eukaryotic... | Despite the unpleasant feeling it causes , pain is necessary for survival as it helps individuals to avoid objects , environments and situations that cause damage to their body . However , millions of people experience long-lasting “chronic” pain , or are hypersensitive to pain . There are few treatments available for ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Material",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"neuroscience"
] | 2015 | Translational control of nociception via 4E-binding protein 1 |
Insulin-like growth factor-I receptor ( IGF-IR ) preferentially regulates the long-term IGF activities including growth and metabolism . Kinetics of ligand-dependent IGF-IR endocytosis determines how IGF induces such downstream signaling outputs . Here , we find that the insulin receptor substrate ( IRS ) −1 modulates ... | Mammals , including humans , use signaling molecules called hormones to carry information from one cell to another . Insulin-like growth factor ( or IGF for short ) is a hormone that is essential throughout an animal’s lifetime . It is needed for growth and for many of the chemical processes that must occur to maintain... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"cell",
"biology"
] | 2018 | IRS-1 acts as an endocytic regulator of IGF-I receptor to facilitate sustained IGF signaling |
Detrimental microbes caused the evolution of a great diversity of antimicrobial defenses in plants and animals . Insects developing underground seem particularly threatened . Here we show that the eggs of a solitary digger wasp , the European beewolf Philanthus triangulum , emit large amounts of gaseous nitric oxide ( ... | Humans use heat , cooling , and freezing to protect their foods from mold and bacteria . Many animals , including a wasp called the European beewolf , have also developed ways to store and preserve food . Female beewolves hunt honeybees . After paralyzing a bee , the beewolf takes the body into an underground chamber a... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"ecology",
"evolutionary",
"biology"
] | 2019 | Nitric oxide radicals are emitted by wasp eggs to kill mold fungi |
Disturbance from whale-watching can cause significant behavioural changes with fitness consequences for targeted whale populations . However , the sensory stimuli triggering these responses are unknown , preventing effective mitigation . Here , we test the hypothesis that vessel noise level is a driver of disturbance ,... | Whale-watching is a multi-billion-dollar industry that is growing around the world . Typically , tour operators use boats to transport tourists into coastal waters to see groups of whales , dolphins or porpoises . There is , however , accumulating evidence that boat-based whale-watching negatively affects the way these... | [
"Abstract",
"Introduction",
"Materials",
"and",
"methods",
"Results",
"Discussion"
] | [
"ecology"
] | 2020 | Vessel noise levels drive behavioural responses of humpback whales with implications for whale-watching |
The circumventricular organs ( CVOs ) in the central nervous system ( CNS ) lack a vascular blood-brain barrier ( BBB ) , creating communication sites for sensory or secretory neurons , involved in body homeostasis . Wnt/β-catenin signaling is essential for BBB development and maintenance in endothelial cells ( ECs ) i... | Infections and diseases in the brain and spine can be very damaging and debilitating . Indeed , the central nervous system also needs a carefully controlled biochemical environment to survive . As such , all animals with a backbone have barriers and defenses to protect and preserve this key system . One of these is the... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"developmental",
"biology"
] | 2019 | Low wnt/β-catenin signaling determines leaky vessels in the subfornical organ and affects water homeostasis in mice |
When human fibroblasts take up plasma low density lipoprotein ( LDL ) , its cholesterol is liberated in lysosomes and eventually reaches the endoplasmic reticulum ( ER ) where it inhibits cholesterol synthesis by blocking activation of SREBPs . This feedback protects against cholesterol overaccumulation in the plasma m... | Cells are enclosed by a plasma membrane that is made of lipid molecules and proteins . Almost half of the lipid molecules in the plasma membranes of animal cells ( including human cells ) are cholesterol molecules . Since cholesterol helps to keep the membrane stable , its level in the plasma membrane is tightly regula... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"cell",
"biology"
] | 2014 | Three pools of plasma membrane cholesterol and their relation to cholesterol homeostasis |
Mitochondrial fusion and fission affect the distribution and quality control of mitochondria . We show that Marf ( Mitochondrial associated regulatory factor ) , is required for mitochondrial fusion and transport in long axons . Moreover , loss of Marf leads to a severe depletion of mitochondria in neuromuscular juncti... | Mitochondria are the main source of energy for cells . These vital and highly dynamic organelles continually change shape by fusing with each other and splitting apart to create new mitochondria , repairing and replacing those damaged by cell stress . For nerve impulses to be transmitted across the gaps ( called synaps... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"developmental",
"biology",
"neuroscience"
] | 2014 | Mitochondrial fusion but not fission regulates larval growth and synaptic development through steroid hormone production |
The unfolded protein response ( UPR ) adjusts the cell’s protein folding capacity in the endoplasmic reticulum ( ER ) according to need . IRE1 is the most conserved UPR sensor in eukaryotic cells . It has remained controversial , however , whether mammalian and yeast IRE1 use a common mechanism for ER stress sensing . ... | Proteins are long string-like molecules that fold into specific three-dimensional shapes . Most proteins that a cell uses to communicate with its environment are folded within a part of the cell called the endoplasmic reticulum . Dedicated sensor proteins in this cellular compartment track this process to make sure tha... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"structural",
"biology",
"and",
"molecular",
"biophysics"
] | 2017 | An unfolded protein-induced conformational switch activates mammalian IRE1 |
The root cap has a fundamental role in sensing environmental cues as well as regulating root growth via altered meristem activity . Despite this well-established role in the control of developmental processes in roots , the root cap’s function in nutrition remains obscure . Here , we uncover its role in phosphate nutri... | All plants need phosphate to grow because it is a major component of DNA and many other biological molecules . Most of the Earth’s soil is poor in phosphate , and so farmland is routinely supplemented with fertilizers to provide crops with this essential nutrient . However , phosphate fertilizers are becoming scarce an... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"plant",
"biology"
] | 2016 | A novel role for the root cap in phosphate uptake and homeostasis |
Fumarase is distributed between two compartments of the eukaryotic cell . The enzyme catalyses the reversible conversion of fumaric to L-malic acid in mitochondria as part of the tricarboxylic acid ( TCA ) cycle , and in the cytosol/nucleus as part of the DNA damage response ( DDR ) . Here , we show that fumarase of th... | Living cells make an enzyme called fumarase . It converts a chemical called fumaric acid into L-malic acid . This is a crucial step in primary metabolism and aerobic respiration , the process of using oxygen to release energy for life . Yet it is not the only role that fumarase plays . In the cells of eukaryotes such a... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology"
] | 2017 | Bacterial fumarase and L-malic acid are evolutionary ancient components of the DNA damage response |
We previously discovered a new osteogenic growth factor that is required to maintain adult skeletal bone mass , Osteolectin/Clec11a . Osteolectin acts on Leptin Receptor+ ( LepR+ ) skeletal stem cells and other osteogenic progenitors in bone marrow to promote their differentiation into osteoblasts . Here we identify a ... | Throughout our lives , our bones undergo constant remodeling . Cells called osteoclasts break down old bone and cells called osteoblasts lay down new . Normally , the two cell types work in balance but if the rate of breakdown outpaces new bone formation the skeleton can become weak . This weakness leads to a condition... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"stem",
"cells",
"and",
"regenerative",
"medicine"
] | 2019 | Integrin alpha11 is an Osteolectin receptor and is required for the maintenance of adult skeletal bone mass |
The coordination of cell proliferation and migration in growing tissues is crucial in development and regeneration but remains poorly understood . Here , we find that , while expanding with an edge speed independent of initial conditions , millimeter-scale epithelial monolayers exhibit internal patterns of proliferatio... | Cells do not exist in isolation . Instead , they form tissues , where individual cells make contact with their neighbors and form microscopic ‘architectures’ . Epithelia are a type of tissue where cells are arranged in flat sheets , and are found in organs such as the lining of the kidney or the skin . Tissues need to ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"developmental",
"biology",
"physics",
"of",
"living",
"systems"
] | 2020 | Size-dependent patterns of cell proliferation and migration in freely-expanding epithelia |
Disruption of protein folding in the endoplasmic reticulum ( ER ) activates the unfolded protein response ( UPR ) —a signaling network that ultimately determines cell fate . Initially , UPR signaling aims at cytoprotection and restoration of ER homeostasis; that failing , it drives apoptotic cell death . ER stress init... | Proteins are chains of building blocks called amino acids , folded into a flexible 3D shape that is critical for its biological activity . This shape depends on many factors , but one is the chemistry of the amino acids . Because the internal and external environments of cells are mostly water-filled , correctly folded... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"cell",
"biology"
] | 2020 | Misfolded proteins bind and activate death receptor 5 to trigger apoptosis during unresolved endoplasmic reticulum stress |
Spatial organization of the transcriptome has emerged as a powerful means for regulating the post-transcriptional fate of RNA in eukaryotes; however , whether prokaryotes use RNA spatial organization as a mechanism for post-transcriptional regulation remains unclear . Here we used super-resolution microscopy to image t... | Within a cell , molecules of messenger RNA ( mRNA ) encode the proteins that the cell needs to survive and thrive . The amount of mRNA within a cell therefore plays an important role in determining both the amount and types of proteins that a cell contains and , thus , the behavior of the cell . In eukaryotic organisms... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology"
] | 2016 | Spatial organization shapes the turnover of a bacterial transcriptome |
Trafficking of myelin-reactive CD4+ T-cells across the brain endothelium , an essential step in the pathogenesis of multiple sclerosis ( MS ) , is suggested to be an antigen-specific process , yet which cells provide this signal is unknown . Here we provide direct evidence that under inflammatory conditions , brain end... | The blood vessels in the brain help to control the entry of nutrients , cells and waste products into and out of the brain . In doing so , they create a protective barrier between the blood and the brain known as the blood-brain barrier . However , this barrier loses its protective function in individuals with multiple... | [
"Abstract",
"Introduction",
"Results",
"and",
"discussion",
"Materials",
"and",
"methods"
] | [
"short",
"report",
"neuroscience",
"immunology",
"and",
"inflammation"
] | 2016 | Internalization and presentation of myelin antigens by the brain endothelium guides antigen-specific T cell migration |
Nervous system maps are of critical importance for understanding how nervous systems develop and function . We systematically map here all cholinergic neuron types in the male and hermaphrodite C . elegans nervous system . We find that acetylcholine ( ACh ) is the most broadly used neurotransmitter and we analyze its u... | To better understand the nervous system—the most complex of all the body’s organs—scientists have begun to painstakingly map its many features . These maps can then be used as a basis for understanding how the nervous system develops and works . Researchers have mapped the connections – called synapses – between all th... | [
"Abstract",
"Introduction",
"Results",
"and",
"discussion",
"Materials",
"and",
"methods"
] | [
"tools",
"and",
"resources",
"neuroscience"
] | 2015 | A cellular and regulatory map of the cholinergic nervous system of C. elegans |
Human lung adenocarcinoma exhibits a propensity for de-differentiation , complicating diagnosis and treatment , and predicting poorer patient survival . In genetically engineered mouse models of lung cancer , expression of the BRAFV600E oncoprotein kinase initiates the growth of benign tumors retaining characteristics ... | Cancers appear when changes in the genetic information of a cell , also called mutations , allow it to multiply uncontrollably . The disease we know as “lung cancer” kills more people than any other cancer , but this term actually refers to different types of tumors that appear because of various mutations that happen ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cancer",
"biology"
] | 2019 | Mutationally-activated PI3’-kinase-α promotes de-differentiation of lung tumors initiated by the BRAFV600E oncoprotein kinase |
Recent developments in human neuroimaging make it possible to non-invasively measure neural activity from different cortical layers . This can potentially reveal not only which brain areas are engaged by a task , but also how . Specifically , bottom-up and top-down responses are associated with distinct laminar profile... | Recent advances in brain imaging have made it possible to map brain activity in areas of tissue less than a millimeter in size . This resolution offers particular advantages for studying the brain’s outer surface , the cortex . The cortex is traditionally divided into several layers , each containing different types an... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2019 | Dissociable laminar profiles of concurrent bottom-up and top-down modulation in the human visual cortex |
Alternative splicing ( AS ) can critically affect gene function and disease , yet mapping splicing variations remains a challenge . Here , we propose a new approach to define and quantify mRNA splicing in units of local splicing variations ( LSVs ) . LSVs capture previously defined types of alternative splicing as well... | Genes contain coded instructions to build other molecules that are collectively referred to as gene products . Building these products requires the gene’s instructions to be copied into a molecule of RNA in a process called transcription . Over 90% of human genes undergo a process by which different segments of the tra... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression",
"computational",
"and",
"systems",
"biology"
] | 2016 | A new view of transcriptome complexity and regulation through the lens of local splicing variations |
Specific cell shapes are fundamental to the organization and function of multicellular organisms . Fibroblast Growth Factor ( FGF ) signaling induces the elongation of lens fiber cells during vertebrate lens development . Nonetheless , exactly how this extracellular FGF signal is transmitted to the cytoskeletal network... | As an embryo develops , its cells divide multiple times to transform into the specialized cell types that form our tissues and organs . To carry out specific roles , cells need to be of a certain shape . For example , in mammals , the cells that make up the main portion of the eye lens , develop into a fiber-like shape... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"developmental",
"biology",
"biochemistry",
"and",
"chemical",
"biology"
] | 2018 | Crk proteins transduce FGF signaling to promote lens fiber cell elongation |
The mechanisms by which mammalian cells recognize and epigenetically restrict viral DNA are not well defined . We used herpes simplex virus with bioorthogonally labeled genomes to detect host factors recruited to viral DNA shortly after its nuclear entry and found that the cellular IFI16 , PML , and ATRX proteins coloc... | Cells carefully package their DNA , tightly wrapping the long , stringy molecule around spool-like groups of proteins called histones . However , the genes that are draped around histones are effectively silenced , because they are ‘hidden’ from the molecular actors that read the genetic information to create proteins ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression",
"microbiology",
"and",
"infectious",
"disease"
] | 2018 | ATRX promotes maintenance of herpes simplex virus heterochromatin during chromatin stress |
Mutations in the synaptic gene SHANK3 lead to a neurodevelopmental disorder known as Phelan-McDermid syndrome ( PMS ) . PMS is a relatively common monogenic and highly penetrant cause of autism spectrum disorder ( ASD ) and intellectual disability ( ID ) , and frequently presents with attention deficits . The underlyin... | Phelan-McDermid syndrome is a genetic disorder on the autism spectrum that affects how children develop in several ways , with additional symptoms including attention deficits , delays in learning to speak and motor problems . This syndrome is known to be caused by changes in a single gene known as SHANK3 that disrupt ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2017 | Oxytocin improves behavioral and electrophysiological deficits in a novel Shank3-deficient rat |
Synaptojanin and endophilin represent a classic pair of endocytic proteins that exhibit coordinated action during rapid synaptic vesicle endocytosis . Current models suggest that synaptojanin activity is tightly associated with endophilin through high-affinity binding between the synaptojanin proline-rich domain ( PRD ... | Nerve cells called neurons can rapidly carry information around the body . Each neuron forms connections called synapses with several other cells to build networks for information exchange . At most synapses , electrical activity in one neuron results in the release of chemicals called neurotransmitters from storage co... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology",
"neuroscience"
] | 2015 | Synaptojanin cooperates in vivo with endophilin through an unexpected mechanism |
Neutrophils release neutrophil extracellular traps ( NETs ) which ensnare pathogens and have pathogenic functions in diverse diseases . We examined the NETosis pathways induced by five stimuli; PMA , the calcium ionophore A23187 , nigericin , Candida albicans and Group B Streptococcus . We studied NET production in neu... | The immune system protects the body against microorganisms that can cause infections and diseases . Neutrophils are a type of immune cell that patrol the blood in search of germs . Once they encounter potentially harmful microbes , neutrophils eradicate them in different ways . One way to catch the germs is by using ‘n... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology",
"immunology",
"and",
"inflammation"
] | 2017 | Diverse stimuli engage different neutrophil extracellular trap pathways |
Trisomy , the presence of a third copy of one chromosome , is deleterious and results in inviable or defective progeny if passed through the germ line . Random segregation of an extra chromosome is predicted to result in a high frequency of trisomic offspring from a trisomic parent . Caenorhabditis elegans with trisomy... | Inside cells , DNA is found packaged into structures called chromosomes . Most human and animal cells contain two sets of chromosomes , one inherited from each parent . Chromosomes from one set pair up with the equivalent chromosome from the other set . However , egg and sperm cells only contain one copy of each chromo... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression",
"cell",
"biology"
] | 2015 | The asymmetry of female meiosis reduces the frequency of inheritance of unpaired chromosomes |
Pharmacological studies in mammals suggest that norepinephrine ( NE ) plays an important role in promoting arousal . However , the role of endogenous NE is unclear , with contradicting reports concerning the sleep phenotypes of mice lacking NE due to mutation of dopamine β-hydroxylase ( dbh ) . To investigate NE functi... | Although the neural circuits that regulate sleep and wakefulness have yet to be fully identified , the importance of at least two brain regions is well established . These are the hypothalamus , a structure deep within the brain that controls a number of basic activities including hunger , thirst and sleep; and the bra... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2015 | Norepinephrine is required to promote wakefulness and for hypocretin-induced arousal in zebrafish |
Ubiquitin-dependent proteolysis can initiate at ribosomes for myriad reasons including misfolding of a nascent chain or stalling of the ribosome during translation of mRNA . Clearance of a stalled complex is required to recycle the ribosome for future use . Here we show that the ubiquitin ( Ub ) pathway segregase Cdc48... | Ribosomes are complex molecular machines that translate the sequence of bases in a messenger RNA ( mRNA ) transcript into a polypeptide that subsequently folds to form a protein . Each ribosome is composed of two major subunits: the small subunit reads the mRNA transcript , and the large subunit joins amino acids toget... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"biochemistry",
"and",
"chemical",
"biology",
"cell",
"biology"
] | 2013 | Cdc48/p97 promotes degradation of aberrant nascent polypeptides bound to the ribosome |
Bergmann's rule is a widely-accepted biogeographic rule stating that individuals within a species are smaller in warmer environments . While there are many single-species studies and integrative reviews documenting this pattern , a data-intensive approach has not been used yet to determine the generality of this patter... | Scientists have found that individual animals of the same species tend to be smaller in hotter environments and larger in cooler ones . They named this pattern “Bergmann’s Rule” to describe how temperature can influence the size of an animal . However , most studies of Bergmann’s Rule have only looked at one or a few s... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"ecology"
] | 2018 | No general relationship between mass and temperature in endothermic species |
mTOR inhibition is beneficial in neurodegenerative disease models and its effects are often attributable to the modulation of autophagy and anti-apoptosis . Here , we report a neglected but important bioenergetic effect of mTOR inhibition in neurons . mTOR inhibition by rapamycin significantly preserves neuronal ATP le... | Living cells need to maintain an optimal balance between making new proteins and destroying older ones . Building proteins requires a supply of nutrients and appropriate levels of energy , and mammalian cells rely on a protein called mTOR to sense both nutrient availability and energy levels . Nutrients activate mTOR s... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Material",
"and",
"methods"
] | [
"neuroscience"
] | 2016 | Alleviation of neuronal energy deficiency by mTOR inhibition as a treatment for mitochondria-related neurodegeneration |
Epigenetic modifiers are an emerging class of anti-tumor drugs , potent in multiple cancer contexts . Their effect on spontaneously developing autoimmune diseases has been little explored . We report that a short treatment with I-BET151 , a small-molecule inhibitor of a family of bromodomain-containing transcriptional ... | The DNA inside a cell is often tightly wrapped around proteins to form a compact structure called chromatin . Chemical groups added to the chromatin can encourage nearby genes to either be switched on or off; and several enzymes and other proteins help to read , add , or remove these marks from the chromatin . If these... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"immunology",
"and",
"inflammation"
] | 2014 | Epigenetic modulation of type-1 diabetes via a dual effect on pancreatic macrophages and β cells |
Homologous recombination ( HR ) -mediated repair of DNA double-strand break ( DSB ) s is restricted to the post-replicative phases of the cell cycle . Initiation of HR in the G1 phase blocks non-homologous end joining ( NHEJ ) impairing DSB repair . Completion of HR in G1 cells can lead to the loss-of-heterozygosity ( ... | The DNA in a cell is damaged thousands of times every day . One of the most serious types of damage involves something breaking both of the strands in the double helix . Such a double-strand break can delete genes or even kill the cell . In fact , conventional cancer therapy kills cancer cells by causing irreparable do... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"chromosomes",
"and",
"gene",
"expression"
] | 2014 | MicroRNAs down-regulate homologous recombination in the G1 phase of cycling cells to maintain genomic stability |
ER O-glycosylation can be induced through relocalisation GalNAc-Transferases from the Golgi . This process markedly stimulates cell migration and is constitutively activated in more than 60% of breast carcinomas . How this activation is achieved remains unclear . Here , we screened 948 signalling genes using RNAi and i... | The likelihood of an individual being able to recover from cancer depends on: where the cancer is within the body , how quickly the disease is detected and how quickly treatment is started . Cancers that have spread from their original location to another part of the body are particular challenging to treat , and cause... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology"
] | 2014 | ERK8 is a negative regulator of O-GalNAc glycosylation and cell migration |
Many recent models study the downstream projection from grid cells to place cells , while recent data have pointed out the importance of the feedback projection . We thus asked how grid cells are affected by the nature of the input from the place cells . We propose a single-layer neural network with feedforward weights... | Long before the invention of GPS systems , ships used a technique called dead reckoning to navigate at sea . By tracking the ship’s speed and direction of movement away from a starting point , the crew could estimate their position at any given time . Many believe that some animals , including rats and humans , can use... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience"
] | 2016 | Extracting grid cell characteristics from place cell inputs using non-negative principal component analysis |
A presynaptic adhesion G-protein-coupled receptor , latrophilin-1 , and a postsynaptic transmembrane protein , Lasso/teneurin-2 , are implicated in trans-synaptic interaction that contributes to synapse formation . Surprisingly , during neuronal development , a substantial proportion of Lasso is released into the inter... | The brain is a complex mesh of interconnected neurons , with each cell making tens , hundreds , or even thousands of connections . These links can stretch over long distances , and establishing them correctly during development is essential . Developing neurons send out long and thin structures , called axons , to reac... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology",
"neuroscience"
] | 2018 | Proteolytically released Lasso/teneurin-2 induces axonal attraction by interacting with latrophilin-1 on axonal growth cones |
Centrioles are characterized by a nine-fold arrangement of microtubule triplets held together by an inner protein scaffold . These structurally robust organelles experience strenuous cellular processes such as cell division or ciliary beating while performing their function . However , the molecular mechanisms underlyi... | Cells are made up of compartments called organelles that perform specific roles . A cylindrical organelle called the centriole is important for a number of cellular processes , ranging from cell division to movement and signaling . Each centriole contains nine blades made up of protein filaments called microtubules , w... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"cell",
"biology"
] | 2020 | WDR90 is a centriolar microtubule wall protein important for centriole architecture integrity |
Although high levels of 5-hydroxymethylcytosine ( 5hmC ) accumulate in mammalian neurons , our knowledge of its roles in terminal differentiation or as an intermediate in active DNA demethylation is incomplete . We report high-resolution mapping of DNA methylation and hydroxymethylation , chromatin accessibility , and ... | At birth , the mammalian brain contains tens of billions of neurons . Although the number does not increase much as the animal grows , there are many dramatic changes to their size and structure . These changes allow the neurons to communicate with one another , develop into networks , and learn the tasks of the adult ... | [
"Abstract",
"Introduction",
"Results",
"Discussion",
"Materials",
"and",
"methods"
] | [
"neuroscience",
"genetics",
"and",
"genomics"
] | 2021 | 5-Hydroxymethylcytosine-mediated active demethylation is required for mammalian neuronal differentiation and function |
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