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aouyar/PyMunin | pymunin/plugins/ntphostoffsets.py | MuninNTPhostOffsetsPlugin.autoconf | def autoconf(self):
"""Implements Munin Plugin Auto-Configuration Option.
@return: True if plugin can be auto-configured, False otherwise.
"""
ntpinfo = NTPinfo()
ntpstats = ntpinfo.getHostOffsets(self._remoteHosts)
return len(ntpstats) > 0 | python | def autoconf(self):
"""Implements Munin Plugin Auto-Configuration Option.
@return: True if plugin can be auto-configured, False otherwise.
"""
ntpinfo = NTPinfo()
ntpstats = ntpinfo.getHostOffsets(self._remoteHosts)
return len(ntpstats) > 0 | [
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aouyar/PyMunin | pymunin/plugins/lighttpdstats.py | MuninLighttpdPlugin.retrieveVals | def retrieveVals(self):
"""Retrieve values for graphs."""
lighttpdInfo = LighttpdInfo(self._host, self._port,
self._user, self._password,
self._statuspath, self._ssl)
stats = lighttpdInfo.getServerStats()
if self.hasGraph('... | python | def retrieveVals(self):
"""Retrieve values for graphs."""
lighttpdInfo = LighttpdInfo(self._host, self._port,
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aouyar/PyMunin | pymunin/plugins/lighttpdstats.py | MuninLighttpdPlugin.autoconf | def autoconf(self):
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@return: True if plugin can be auto-configured, False otherwise.
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lighttpdInfo = LighttpdInfo(self._host, self._port,
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... | python | def autoconf(self):
"""Implements Munin Plugin Auto-Configuration Option.
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aouyar/PyMunin | pymunin/plugins/diskusagestats.py | MuninDiskUsagePlugin.retrieveVals | def retrieveVals(self):
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self._statsSp... | python | def retrieveVals(self):
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name = 'diskspace'
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scikit-umfpack/scikit-umfpack | scikits/umfpack/umfpack.py | UmfpackContext.symbolic | def symbolic(self, mtx):
"""
Perform symbolic object (symbolic LU decomposition) computation for a given
sparsity pattern.
"""
self.free_symbolic()
indx = self._getIndx(mtx)
if not assumeSortedIndices:
# row/column indices cannot be assumed to be sor... | python | def symbolic(self, mtx):
"""
Perform symbolic object (symbolic LU decomposition) computation for a given
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"""
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scikit-umfpack/scikit-umfpack | scikits/umfpack/umfpack.py | UmfpackContext.numeric | def numeric(self, mtx):
"""
Perform numeric object (LU decomposition) computation using the
symbolic decomposition. The symbolic decomposition is (re)computed
if necessary.
"""
self.free_numeric()
if self._symbolic is None:
self.symbolic(mtx)
... | python | def numeric(self, mtx):
"""
Perform numeric object (LU decomposition) computation using the
symbolic decomposition. The symbolic decomposition is (re)computed
if necessary.
"""
self.free_numeric()
if self._symbolic is None:
self.symbolic(mtx)
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scikit-umfpack/scikit-umfpack | scikits/umfpack/umfpack.py | UmfpackContext.free_symbolic | def free_symbolic(self):
"""Free symbolic data"""
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self.funs.free_symbolic(self._symbolic)
self._symbolic = None
self.mtx = None | python | def free_symbolic(self):
"""Free symbolic data"""
if self._symbolic is not None:
self.funs.free_symbolic(self._symbolic)
self._symbolic = None
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scikit-umfpack/scikit-umfpack | scikits/umfpack/umfpack.py | UmfpackContext.free_numeric | def free_numeric(self):
"""Free numeric data"""
if self._numeric is not None:
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self.free_symbolic() | python | def free_numeric(self):
"""Free numeric data"""
if self._numeric is not None:
self.funs.free_numeric(self._numeric)
self._numeric = None
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scikit-umfpack/scikit-umfpack | scikits/umfpack/umfpack.py | UmfpackContext.solve | def solve(self, sys, mtx, rhs, autoTranspose=False):
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Solution of system of linear equation using the Numeric object.
Parameters
----------
sys : constant
one of UMFPACK system description constants, like
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Solution of system of linear equation using the Numeric object.
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one of UMFPACK system description constants, like
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scikit-umfpack/scikit-umfpack | scikits/umfpack/umfpack.py | UmfpackContext.linsolve | def linsolve(self, sys, mtx, rhs, autoTranspose=False):
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One-shot solution of system of linear equation. Reuses Numeric object
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Parameters
----------
sys : constant
one of UMFPACK system description constants, like
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One-shot solution of system of linear equation. Reuses Numeric object
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sys : constant
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scikit-umfpack/scikit-umfpack | scikits/umfpack/umfpack.py | UmfpackContext.lu | def lu(self, mtx):
"""
Perform LU decomposition.
For a given matrix A, the decomposition satisfies::
LU = PRAQ when do_recip is true
LU = P(R^-1)AQ when do_recip is false
Parameters
----------
mtx : scipy.sparse.csc_matrix or sc... | python | def lu(self, mtx):
"""
Perform LU decomposition.
For a given matrix A, the decomposition satisfies::
LU = PRAQ when do_recip is true
LU = P(R^-1)AQ when do_recip is false
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ContextLab/quail | quail/fingerprint.py | order_stick | def order_stick(presenter, egg, dist_dict, strategy, fingerprint):
"""
Reorders a list according to strategy
"""
def compute_feature_stick(features, weights, alpha):
'''create a 'stick' of feature weights'''
feature_stick = []
for f, w in zip(features, weights):
fea... | python | def order_stick(presenter, egg, dist_dict, strategy, fingerprint):
"""
Reorders a list according to strategy
"""
def compute_feature_stick(features, weights, alpha):
'''create a 'stick' of feature weights'''
feature_stick = []
for f, w in zip(features, weights):
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ContextLab/quail | quail/fingerprint.py | stick_perm | def stick_perm(presenter, egg, dist_dict, strategy):
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# unpack egg
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"""Computes weights for one reordering using stick-breaking method"""
# seed RNG
np.random.seed()
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egg_pres, egg_rec, egg_features, egg_dist_funcs = parse_egg(egg)
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ContextLab/quail | quail/fingerprint.py | compute_distances_dict | def compute_distances_dict(egg):
""" Creates a nested dict of distances """
pres, rec, features, dist_funcs = parse_egg(egg)
pres_list = list(pres)
features_list = list(features)
# initialize dist dict
distances = {}
# for each word in the list
for idx1, item1 in enumerate(pres_list):
... | python | def compute_distances_dict(egg):
""" Creates a nested dict of distances """
pres, rec, features, dist_funcs = parse_egg(egg)
pres_list = list(pres)
features_list = list(features)
# initialize dist dict
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ContextLab/quail | quail/fingerprint.py | compute_feature_weights_dict | def compute_feature_weights_dict(pres_list, rec_list, feature_list, dist_dict):
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pres_list : list
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ContextLab/quail | quail/fingerprint.py | Fingerprint.update | def update(self, egg, permute=False, nperms=1000,
parallel=False):
"""
In-place method that updates fingerprint with new data
Parameters
----------
egg : quail.Egg
Data to update fingerprint
Returns
----------
None
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"""
In-place method that updates fingerprint with new data
Parameters
----------
egg : quail.Egg
Data to update fingerprint
Returns
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ContextLab/quail | quail/fingerprint.py | OptimalPresenter.order | def order(self, egg, method='permute', nperms=2500, strategy=None,
distfun='correlation', fingerprint=None):
"""
Reorders a list of stimuli to match a fingerprint
Parameters
----------
egg : quail.Egg
Data to compute fingerprint
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Reorders a list of stimuli to match a fingerprint
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo._getDevMajorMinor | def _getDevMajorMinor(self, devpath):
"""Return major and minor device number for block device path devpath.
@param devpath: Full path for block device.
@return: Tuple (major, minor).
"""
fstat = os.stat(devpath)
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... | python | def _getDevMajorMinor(self, devpath):
"""Return major and minor device number for block device path devpath.
@param devpath: Full path for block device.
@return: Tuple (major, minor).
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fstat = os.stat(devpath)
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@param devpath: Full path for block device.
@return: Unique device string without the /dev prefix.
"""
realpath = os.path.realpath(devpath)
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"""Return unique device for any block device path.
@param devpath: Full path for block device.
@return: Unique device string without the /dev prefix.
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo._initBlockMajorMap | def _initBlockMajorMap(self):
"""Parses /proc/devices to initialize device class - major number map
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"""
self._mapMajorDevclass = {}
try:
fp = open(devicesFile, 'r')
data = fp.read()
fp.close()
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"""Parses /proc/devices to initialize device class - major number map
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"""
self._mapMajorDevclass = {}
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"""
self._mapLVtuple2dm = {}
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo._initFilesystemInfo | def _initFilesystemInfo(self):
"""Initialize filesystem to device mappings."""
self._mapFSpathDev = {}
fsinfo = FilesystemInfo()
for fs in fsinfo.getFSlist():
devpath = fsinfo.getFSdev(fs)
dev = self._getUniqueDev(devpath)
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... | python | def _initFilesystemInfo(self):
"""Initialize filesystem to device mappings."""
self._mapFSpathDev = {}
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo._initSwapInfo | def _initSwapInfo(self):
"""Initialize swap partition to device mappings."""
self._swapList = []
sysinfo = SystemInfo()
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if attrs['type'] == 'partition':
dev = self._getUniqueDev(swap)
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"""Initialize swap partition to device mappings."""
self._swapList = []
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo._initDiskStats | def _initDiskStats(self):
"""Parse and initialize block device I/O stats in /proc/diskstats."""
self._diskStats = {}
self._mapMajorMinor2dev = {}
try:
fp = open(diskStatsFile, 'r')
data = fp.read()
fp.close()
except:
raise IOError('... | python | def _initDiskStats(self):
"""Parse and initialize block device I/O stats in /proc/diskstats."""
self._diskStats = {}
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo._initDevClasses | def _initDevClasses(self):
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self._mapDevType = {}
basedevs = []
otherdevs = []
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo.getDevType | def getDevType(self, dev):
"""Returns type of device dev.
@return: Device type as string.
"""
if self._devClassTree is None:
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo.getPartitionList | def getPartitionList(self):
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@return: List of (disk,partition) pairs.
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo.getDevStats | def getDevStats(self, dev, devtype = None):
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@param devtype: Device type. (Ignored if None.)
@return: Dict of stats.
"""
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo.getSwapStats | def getSwapStats(self, dev):
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo.getLVstats | def getLVstats(self, *args):
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- Passing only one parameter in 'vg-lv' format.
@return: Dict of stats.
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aouyar/PyMunin | pysysinfo/diskio.py | DiskIOinfo.getFilesystemStats | def getFilesystemStats(self, fs):
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@return: Dict of stats.
"""
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aouyar/PyMunin | pymunin/plugins/ntphostoffset_.py | MuninNTPhostOffsetPlugin.retrieveVals | def retrieveVals(self):
"""Retrieve values for graphs."""
ntpinfo = NTPinfo()
stats = ntpinfo.getHostOffset(self._remoteHost)
if stats:
graph_name = 'ntp_host_stratum_%s' % self._remoteHost
if self.hasGraph(graph_name):
self.setGraphVal(graph_name,... | python | def retrieveVals(self):
"""Retrieve values for graphs."""
ntpinfo = NTPinfo()
stats = ntpinfo.getHostOffset(self._remoteHost)
if stats:
graph_name = 'ntp_host_stratum_%s' % self._remoteHost
if self.hasGraph(graph_name):
self.setGraphVal(graph_name,... | [
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aouyar/PyMunin | pysysinfo/rackspace.py | CloudFilesInfo.getContainerStats | def getContainerStats(self, limit=None, marker=None):
"""Returns Rackspace Cloud Files usage stats for containers.
@param limit: Number of containers to return.
@param marker: Return only results whose name is greater than marker.
@return: Dictionary of container stats in... | python | def getContainerStats(self, limit=None, marker=None):
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ContextLab/quail | quail/decode_speech.py | decode_speech | def decode_speech(path, keypath=None, save=False, speech_context=None,
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enable_word_time_offsets=True, return_raw=False):
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Decode speech for a file or folder and return results
This function wraps the Google... | python | def decode_speech(path, keypath=None, save=False, speech_context=None,
sample_rate=44100, max_alternatives=1, language_code='en-US',
enable_word_time_offsets=True, return_raw=False):
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aouyar/PyMunin | pysysinfo/squid.py | parse_value | def parse_value(val):
"""Parse input string and return int, float or str depending on format.
@param val: Input string.
@return: Value of type int, float or str.
"""
mobj = re.match('(-{0,1}\d+)\s*(\sseconds|/\s*\w+)$', val)
if mobj:
return int(mobj.group(1))
m... | python | def parse_value(val):
"""Parse input string and return int, float or str depending on format.
@param val: Input string.
@return: Value of type int, float or str.
"""
mobj = re.match('(-{0,1}\d+)\s*(\sseconds|/\s*\w+)$', val)
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aouyar/PyMunin | pysysinfo/squid.py | SquidInfo._connect | def _connect(self):
"""Connect to Squid Proxy Manager interface."""
if sys.version_info[:2] < (2,6):
self._conn = httplib.HTTPConnection(self._host, self._port)
else:
self._conn = httplib.HTTPConnection(self._host, self._port,
... | python | def _connect(self):
"""Connect to Squid Proxy Manager interface."""
if sys.version_info[:2] < (2,6):
self._conn = httplib.HTTPConnection(self._host, self._port)
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aouyar/PyMunin | pysysinfo/squid.py | SquidInfo._retrieve | def _retrieve(self, map):
"""Query Squid Proxy Server Manager Interface for stats.
@param map: Statistics map name.
@return: Dictionary of query results.
"""
self._conn.request('GET', "cache_object://%s/%s" % (self._host, map),
Non... | python | def _retrieve(self, map):
"""Query Squid Proxy Server Manager Interface for stats.
@param map: Statistics map name.
@return: Dictionary of query results.
"""
self._conn.request('GET', "cache_object://%s/%s" % (self._host, map),
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aouyar/PyMunin | pysysinfo/squid.py | SquidInfo._parseCounters | def _parseCounters(self, data):
"""Parse simple stats list of key, value pairs.
@param data: Multiline data with one key-value pair in each line.
@return: Dictionary of stats.
"""
info_dict = util.NestedDict()
for line in data.splitlines():
... | python | def _parseCounters(self, data):
"""Parse simple stats list of key, value pairs.
@param data: Multiline data with one key-value pair in each line.
@return: Dictionary of stats.
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aouyar/PyMunin | pysysinfo/squid.py | SquidInfo._parseSections | def _parseSections(self, data):
"""Parse data and separate sections. Returns dictionary that maps
section name to section data.
@param data: Multiline data.
@return: Dictionary that maps section names to section data.
"""
section_dict = {}
l... | python | def _parseSections(self, data):
"""Parse data and separate sections. Returns dictionary that maps
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@param data: Multiline data.
@return: Dictionary that maps section names to section data.
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section_dict = {}
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aouyar/PyMunin | pysysinfo/squid.py | SquidInfo.getMenu | def getMenu(self):
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@return: List of tuples (section, description, type)
"""
data = self._retrieve('')
info_list = []
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mobj = re.match('^\s*(\S.*\S... | python | def getMenu(self):
"""Get manager interface section list from Squid Proxy Server
@return: List of tuples (section, description, type)
"""
data = self._retrieve('')
info_list = []
for line in data.splitlines():
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aouyar/PyMunin | pysysinfo/wanpipe.py | WanpipeInfo.getIfaceStats | def getIfaceStats(self):
"""Return dictionary of Traffic Stats for each Wanpipe Interface.
@return: Nested dictionary of statistics for each interface.
"""
ifInfo = netiface.NetIfaceInfo()
ifStats = ifInfo.getIfStats()
info_dict = {}
for ifname i... | python | def getIfaceStats(self):
"""Return dictionary of Traffic Stats for each Wanpipe Interface.
@return: Nested dictionary of statistics for each interface.
"""
ifInfo = netiface.NetIfaceInfo()
ifStats = ifInfo.getIfStats()
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aouyar/PyMunin | pysysinfo/wanpipe.py | WanpipeInfo.getPRIstats | def getPRIstats(self, iface):
"""Return RDSI Operational Stats for interface.
@param iface: Interface name. (Ex. w1g1)
@return: Nested dictionary of statistics for interface.
"""
info_dict = {}
output = util.exec_command([wanpipemonCmd, '-i', iface, '-c', ... | python | def getPRIstats(self, iface):
"""Return RDSI Operational Stats for interface.
@param iface: Interface name. (Ex. w1g1)
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info_dict = {}
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aouyar/PyMunin | pysysinfo/freeswitch.py | FSinfo._connect | def _connect(self):
"""Connect to FreeSWITCH ESL Interface."""
try:
self._eslconn = ESL.ESLconnection(self._eslhost,
str(self._eslport),
self._eslpass)
except:
pass
if no... | python | def _connect(self):
"""Connect to FreeSWITCH ESL Interface."""
try:
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aouyar/PyMunin | pysysinfo/freeswitch.py | FSinfo._execCmd | def _execCmd(self, cmd, args):
"""Execute command and return result body as list of lines.
@param cmd: Command string.
@param args: Comand arguments string.
@return: Result dictionary.
"""
output = self._eslconn.api(cmd, args)
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"""Execute command and return result body as list of lines.
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@param args: Comand arguments string.
@return: Result dictionary.
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aouyar/PyMunin | pysysinfo/freeswitch.py | FSinfo._execShowCmd | def _execShowCmd(self, showcmd):
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@param cmd: Command string.
@return: Result dictionary.
"""
result = None
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aouyar/PyMunin | pysysinfo/freeswitch.py | FSinfo._execShowCountCmd | def _execShowCountCmd(self, showcmd):
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@param cmd: Command string.
@return: Result dictionary.
"""
result = None
lines = self._execCmd("show", showcmd + " count")
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result = None
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aouyar/PyMunin | pymunin/plugins/asteriskstats.py | MuninAsteriskPlugin.retrieveVals | def retrieveVals(self):
"""Retrieve values for graphs."""
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stats = self._ami.getChannelStats(self._chanList)
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aouyar/PyMunin | pymunin/plugins/phpfpmstats.py | MuninPHPfpmPlugin.autoconf | def autoconf(self):
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"""Implements Munin Plugin Auto-Configuration Option.
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aouyar/PyMunin | pysysinfo/redisdb.py | RedisInfo.ping | def ping(self):
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"""
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"""Ping Redis Server and return Round-Trip-Time in seconds.
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ContextLab/quail | quail/helpers.py | list2pd | def list2pd(all_data, subjindex=None, listindex=None):
"""
Makes multi-indexed dataframe of subject data
Parameters
----------
all_data : list of lists of strings
strings are either all presented or all recalled items, in the order of presentation or recall
*should also work for pre... | python | def list2pd(all_data, subjindex=None, listindex=None):
"""
Makes multi-indexed dataframe of subject data
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all_data : list of lists of strings
strings are either all presented or all recalled items, in the order of presentation or recall
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ContextLab/quail | quail/helpers.py | recmat2egg | def recmat2egg(recmat, list_length=None):
"""
Creates egg data object from zero-indexed recall matrix
Parameters
----------
recmat : list of lists (subs) of lists (encoding lists) of ints or 2D numpy array
recall matrix representing serial positions of freely recalle... | python | def recmat2egg(recmat, list_length=None):
"""
Creates egg data object from zero-indexed recall matrix
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ContextLab/quail | quail/helpers.py | default_dist_funcs | def default_dist_funcs(dist_funcs, feature_example):
"""
Fills in default distance metrics for fingerprint analyses
"""
if dist_funcs is None:
dist_funcs = dict()
for key in feature_example:
if key in dist_funcs:
pass
if key =... | python | def default_dist_funcs(dist_funcs, feature_example):
"""
Fills in default distance metrics for fingerprint analyses
"""
if dist_funcs is None:
dist_funcs = dict()
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ContextLab/quail | quail/helpers.py | stack_eggs | def stack_eggs(eggs, meta='concatenate'):
'''
Takes a list of eggs, stacks them and reindexes the subject number
Parameters
----------
eggs : list of Egg data objects
A list of Eggs that you want to combine
meta : string
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'''
Takes a list of eggs, stacks them and reindexes the subject number
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eggs : list of Egg data objects
A list of Eggs that you want to combine
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ContextLab/quail | quail/helpers.py | crack_egg | def crack_egg(egg, subjects=None, lists=None):
'''
Takes an egg and returns a subset of the subjects or lists
Parameters
----------
egg : Egg data object
Egg that you want to crack
subjects : list
List of subject idxs
lists : list
List of lists idxs
Returns
... | python | def crack_egg(egg, subjects=None, lists=None):
'''
Takes an egg and returns a subset of the subjects or lists
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----------
egg : Egg data object
Egg that you want to crack
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ContextLab/quail | quail/helpers.py | df2list | def df2list(df):
"""
Convert a MultiIndex df to list
Parameters
----------
df : pandas.DataFrame
A MultiIndex DataFrame where the first level is subjects and the second
level is lists (e.g. egg.pres)
Returns
----------
lst : a list of lists of lists of values
... | python | def df2list(df):
"""
Convert a MultiIndex df to list
Parameters
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df : pandas.DataFrame
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ContextLab/quail | quail/helpers.py | fill_missing | def fill_missing(x):
"""
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"""
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Fills in missing lists (assumes end lists are missing)
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ContextLab/quail | quail/helpers.py | parse_egg | def parse_egg(egg):
"""Parses an egg and returns fields"""
pres_list = egg.get_pres_items().values[0]
rec_list = egg.get_rec_items().values[0]
feature_list = egg.get_pres_features().values[0]
dist_funcs = egg.dist_funcs
return pres_list, rec_list, feature_list, dist_funcs | python | def parse_egg(egg):
"""Parses an egg and returns fields"""
pres_list = egg.get_pres_items().values[0]
rec_list = egg.get_rec_items().values[0]
feature_list = egg.get_pres_features().values[0]
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ContextLab/quail | quail/helpers.py | merge_pres_feats | def merge_pres_feats(pres, features):
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Helper function to merge pres and features to support legacy features argument
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ContextLab/quail | quail/helpers.py | r2z | def r2z(r):
"""
Function that calculates the Fisher z-transformation
Parameters
----------
r : int or ndarray
Correlation value
Returns
----------
result : int or ndarray
Fishers z transformed correlation value
"""
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"""
Function that calculates the Fisher z-transformation
Parameters
----------
r : int or ndarray
Correlation value
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result : int or ndarray
Fishers z transformed correlation value
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ContextLab/quail | quail/helpers.py | z2r | def z2r(z):
"""
Function that calculates the inverse Fisher z-transformation
Parameters
----------
z : int or ndarray
Fishers z transformed correlation value
Returns
----------
result : int or ndarray
Correlation value
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"""
Function that calculates the inverse Fisher z-transformation
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z : int or ndarray
Fishers z transformed correlation value
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result : int or ndarray
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ContextLab/quail | quail/helpers.py | shuffle_egg | def shuffle_egg(egg):
""" Shuffle an Egg's recalls"""
from .egg import Egg
pres, rec, features, dist_funcs = parse_egg(egg)
if pres.ndim==1:
pres = pres.reshape(1, pres.shape[0])
rec = rec.reshape(1, rec.shape[0])
features = features.reshape(1, features.shape[0])
for ilist ... | python | def shuffle_egg(egg):
""" Shuffle an Egg's recalls"""
from .egg import Egg
pres, rec, features, dist_funcs = parse_egg(egg)
if pres.ndim==1:
pres = pres.reshape(1, pres.shape[0])
rec = rec.reshape(1, rec.shape[0])
features = features.reshape(1, features.shape[0])
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aouyar/PyMunin | pymunin/plugins/netifacestats.py | MuninNetIfacePlugin.retrieveVals | def retrieveVals(self):
"""Retrieve values for graphs."""
for iface in self._ifaceList:
stats = self._ifaceStats.get(iface)
graph_name = 'netiface_traffic_%s' % iface
if self.hasGraph(graph_name):
self.setGraphVal(graph_name, 'rx', stats.get('rxbytes')... | python | def retrieveVals(self):
"""Retrieve values for graphs."""
for iface in self._ifaceList:
stats = self._ifaceStats.get(iface)
graph_name = 'netiface_traffic_%s' % iface
if self.hasGraph(graph_name):
self.setGraphVal(graph_name, 'rx', stats.get('rxbytes')... | [
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aouyar/PyMunin | pysysinfo/ntp.py | NTPinfo.getPeerStats | def getPeerStats(self):
"""Get NTP Peer Stats for localhost by querying local NTP Server.
@return: Dictionary of NTP stats converted to seconds.
"""
info_dict = {}
output = util.exec_command([ntpqCmd, '-n', '-c', 'peers'])
for line in output.splitlines():
... | python | def getPeerStats(self):
"""Get NTP Peer Stats for localhost by querying local NTP Server.
@return: Dictionary of NTP stats converted to seconds.
"""
info_dict = {}
output = util.exec_command([ntpqCmd, '-n', '-c', 'peers'])
for line in output.splitlines():
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aouyar/PyMunin | pysysinfo/ntp.py | NTPinfo.getHostOffset | def getHostOffset(self, host):
"""Get NTP Stats and offset of remote host relative to localhost
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@param host: Remote Host IP.
@return: Dictionary of NTP stats converted to seconds.
"""
info_dict = {}
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"""Get NTP Stats and offset of remote host relative to localhost
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@param host: Remote Host IP.
@return: Dictionary of NTP stats converted to seconds.
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aouyar/PyMunin | pysysinfo/ntp.py | NTPinfo.getHostOffsets | def getHostOffsets(self, hosts):
"""Get NTP Stats and offset of multiple remote hosts relative to localhost
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@param host: List of Remote Host IPs.
@return: Dictionary of NTP stats converted to seconds.
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"""Get NTP Stats and offset of multiple remote hosts relative to localhost
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aouyar/PyMunin | pysysinfo/system.py | SystemInfo.getUptime | def getUptime(self):
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@return: Float that represents uptime in seconds.
"""
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"""Return system uptime in seconds.
@return: Float that represents uptime in seconds.
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aouyar/PyMunin | pysysinfo/system.py | SystemInfo.getLoadAvg | def getLoadAvg(self):
"""Return system Load Average.
@return: List of 1 min, 5 min and 15 min Load Average figures.
"""
try:
fp = open(loadavgFile, 'r')
line = fp.readline()
fp.close()
except:
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"""Return system Load Average.
@return: List of 1 min, 5 min and 15 min Load Average figures.
"""
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aouyar/PyMunin | pysysinfo/system.py | SystemInfo.getCPUuse | def getCPUuse(self):
"""Return cpu time utilization in seconds.
@return: Dictionary of stats.
"""
hz = os.sysconf('SC_CLK_TCK')
info_dict = {}
try:
fp = open(cpustatFile, 'r')
line = fp.readline()
fp.close()
ex... | python | def getCPUuse(self):
"""Return cpu time utilization in seconds.
@return: Dictionary of stats.
"""
hz = os.sysconf('SC_CLK_TCK')
info_dict = {}
try:
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aouyar/PyMunin | pysysinfo/system.py | SystemInfo.getProcessStats | def getProcessStats(self):
"""Return stats for running and blocked processes, forks,
context switches and interrupts.
@return: Dictionary of stats.
"""
info_dict = {}
try:
fp = open(cpustatFile, 'r')
data = fp.read()
... | python | def getProcessStats(self):
"""Return stats for running and blocked processes, forks,
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@return: Dictionary of stats.
"""
info_dict = {}
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aouyar/PyMunin | pysysinfo/system.py | SystemInfo.getMemoryUse | def getMemoryUse(self):
"""Return stats for memory utilization.
@return: Dictionary of stats.
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raise IOError('Failed re... | python | def getMemoryUse(self):
"""Return stats for memory utilization.
@return: Dictionary of stats.
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aouyar/PyMunin | pysysinfo/system.py | SystemInfo.getSwapStats | def getSwapStats(self):
"""Return information on swap partition and / or files.
@return: Dictionary of stats.
"""
info_dict = {}
try:
fp = open(swapsFile, 'r')
data = fp.read()
fp.close()
except:
ra... | python | def getSwapStats(self):
"""Return information on swap partition and / or files.
@return: Dictionary of stats.
"""
info_dict = {}
try:
fp = open(swapsFile, 'r')
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aouyar/PyMunin | pysysinfo/system.py | SystemInfo.getVMstats | def getVMstats(self):
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@return: Dictionary of stats.
"""
info_dict = {}
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fp = open(vmstatFile, 'r')
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except:
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"""Return stats for Virtual Memory Subsystem.
@return: Dictionary of stats.
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info_dict = {}
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aouyar/PyMunin | pysysinfo/memcached.py | MemcachedInfo._connect | def _connect(self):
"""Connect to Memcached."""
if self._socketFile is not None:
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raise Exception("Socket file (%s) for Memcached Instance not found."
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try:
if self.... | python | def _connect(self):
"""Connect to Memcached."""
if self._socketFile is not None:
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aouyar/PyMunin | pysysinfo/memcached.py | MemcachedInfo._sendStatCmd | def _sendStatCmd(self, cmd):
"""Send stat command to Memcached Server and return response lines.
@param cmd: Command string.
@return: Array of strings.
"""
try:
self._conn.write("%s\r\n" % cmd)
regex = re.compile('^(END|ERROR)\r\n', r... | python | def _sendStatCmd(self, cmd):
"""Send stat command to Memcached Server and return response lines.
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@return: Array of strings.
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aouyar/PyMunin | pysysinfo/memcached.py | MemcachedInfo._parseStats | def _parseStats(self, lines, parse_slabs = False):
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@param lines: Array of lines of input text.
@param parse_slabs: Parse slab stats if True.
@return: Stats dictionary.
"""
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@param parse_slabs: Parse slab stats if True.
@return: Stats dictionary.
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aouyar/PyMunin | pymunin/plugins/memcachedstats.py | MuninMemcachedPlugin.retrieveVals | def retrieveVals(self):
"""Retrieve values for graphs."""
if self._stats is None:
serverInfo = MemcachedInfo(self._host, self._port, self._socket_file)
stats = serverInfo.getStats()
else:
stats = self._stats
if stats is None:
raise Excepti... | python | def retrieveVals(self):
"""Retrieve values for graphs."""
if self._stats is None:
serverInfo = MemcachedInfo(self._host, self._port, self._socket_file)
stats = serverInfo.getStats()
else:
stats = self._stats
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aouyar/PyMunin | pymunin/plugins/memcachedstats.py | MuninMemcachedPlugin.autoconf | def autoconf(self):
"""Implements Munin Plugin Auto-Configuration Option.
@return: True if plugin can be auto-configured, False otherwise.
"""
serverInfo = MemcachedInfo(self._host, self._port, self._socket_file)
return (serverInfo is not None) | python | def autoconf(self):
"""Implements Munin Plugin Auto-Configuration Option.
@return: True if plugin can be auto-configured, False otherwise.
"""
serverInfo = MemcachedInfo(self._host, self._port, self._socket_file)
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ContextLab/quail | quail/distance.py | correlation | def correlation(a, b):
"Returns correlation distance between a and b"
if isinstance(a, list):
a = np.array(a)
if isinstance(b, list):
b = np.array(b)
a = a.reshape(1, -1)
b = b.reshape(1, -1)
return cdist(a, b, 'correlation') | python | def correlation(a, b):
"Returns correlation distance between a and b"
if isinstance(a, list):
a = np.array(a)
if isinstance(b, list):
b = np.array(b)
a = a.reshape(1, -1)
b = b.reshape(1, -1)
return cdist(a, b, 'correlation') | [
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aouyar/PyMunin | pysysinfo/process.py | ProcessInfo.execProcCmd | def execProcCmd(self, *args):
"""Execute ps command with positional params args and return result as
list of lines.
@param *args: Positional params for ps command.
@return: List of output lines
"""
out = util.exec_command([psCmd,] + list(args))
... | python | def execProcCmd(self, *args):
"""Execute ps command with positional params args and return result as
list of lines.
@param *args: Positional params for ps command.
@return: List of output lines
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out = util.exec_command([psCmd,] + list(args))
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aouyar/PyMunin | pysysinfo/process.py | ProcessInfo.parseProcCmd | def parseProcCmd(self, fields=('pid', 'user', 'cmd',), threads=False):
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aouyar/PyMunin | pysysinfo/process.py | ProcessInfo.getProcList | def getProcList(self, fields=('pid', 'user', 'cmd',), threads=False,
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aouyar/PyMunin | pysysinfo/process.py | ProcessInfo.getProcStatStatus | def getProcStatStatus(self, threads=False, **kwargs):
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@param **kwargs: Keyword variables are used for filtering the results
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aouyar/PyMunin | pymunin/plugins/ntpstats.py | MuninNTPstatsPlugin.retrieveVals | def retrieveVals(self):
"""Retrieve values for graphs."""
ntpinfo = NTPinfo()
stats = ntpinfo.getPeerStats()
if stats:
if self.hasGraph('ntp_peer_stratum'):
self.setGraphVal('ntp_peer_stratum', 'stratum',
stats.get('stratum'))... | python | def retrieveVals(self):
"""Retrieve values for graphs."""
ntpinfo = NTPinfo()
stats = ntpinfo.getPeerStats()
if stats:
if self.hasGraph('ntp_peer_stratum'):
self.setGraphVal('ntp_peer_stratum', 'stratum',
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aouyar/PyMunin | pymunin/__init__.py | muninMain | def muninMain(pluginClass, argv=None, env=None, debug=False):
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@param pluginClass: Child class of MuninPlugin that implements plugin.
@param argv: List of command line arguments to Munin Plugin.
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aouyar/PyMunin | pymunin/__init__.py | fixLabel | def fixLabel(label, maxlen, delim=None, repl='', truncend=True):
"""Truncate long graph and field labels.
@param label: Label text.
@param maxlen: Maximum field label length in characters.
No maximum field label length is enforced by default.
@param delim: ... | python | def fixLabel(label, maxlen, delim=None, repl='', truncend=True):
"""Truncate long graph and field labels.
@param label: Label text.
@param maxlen: Maximum field label length in characters.
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin._parseEnv | def _parseEnv(self, env=None):
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Parses for environment variables common to all Munin Plugins:
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- MUNIN_CAP_DIRTY_CONFIG
- nested_graphs
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin._getGraph | def _getGraph(self, graph_name, fail_noexist=False):
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@param graph_name: Graph Name
@param fail_noexist: If true throw exception if there is no graph with
name graph_name.
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin._getSubGraph | def _getSubGraph(self, parent_name, graph_name, fail_noexist=False):
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@param parent_name: Root Graph Name
@param graph_name: Subgraph Name
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin._getMultigraphID | def _getMultigraphID(self, graph_name, subgraph_name=None):
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@param graph_name: Graph Name.
@param subgraph_name: Subgraph Name.
@return: Multigraph ID.
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin._formatConfig | def _formatConfig(self, conf_dict):
"""Formats configuration directory from Munin Graph and returns
multi-line value entries for the plugin config cycle.
@param conf_dict: Configuration directory.
@return: Multi-line text.
"""
confs = []
... | python | def _formatConfig(self, conf_dict):
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin._formatVals | def _formatVals(self, val_list):
"""Formats value list from Munin Graph and returns multi-line value
entries for the plugin fetch cycle.
@param val_list: List of name-value pairs.
@return: Multi-line text.
"""
vals = []
for (name, val) i... | python | def _formatVals(self, val_list):
"""Formats value list from Munin Graph and returns multi-line value
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@param val_list: List of name-value pairs.
@return: Multi-line text.
"""
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin.envGet | def envGet(self, name, default=None, conv=None):
"""Return value for environment variable or None.
@param name: Name of environment variable.
@param default: Default value if variable is undefined.
@param conv: Function for converting value to desired type.
@retu... | python | def envGet(self, name, default=None, conv=None):
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@param name: Name of environment variable.
@param default: Default value if variable is undefined.
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin.envGetList | def envGetList(self, name, attr_regex = '^\w+$', conv=None):
"""Parse the plugin environment variables to return list from variable
with name list_<name>. The value of the variable must be a comma
separated list of items.
@param name: Name of list.
... | python | def envGetList(self, name, attr_regex = '^\w+$', conv=None):
"""Parse the plugin environment variables to return list from variable
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin.envRegisterFilter | def envRegisterFilter(self, name, attr_regex = '^\w+$', default = True):
"""Register filter for including, excluding attributes in graphs through
the use of include_<name> and exclude_<name> environment variables.
The value of the variables must be a comma separated list of items.
... | python | def envRegisterFilter(self, name, attr_regex = '^\w+$', default = True):
"""Register filter for including, excluding attributes in graphs through
the use of include_<name> and exclude_<name> environment variables.
The value of the variables must be a comma separated list of items.
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin.envCheckFilter | def envCheckFilter(self, name, attr):
"""Check if a specific graph attribute is enabled or disabled through
the use of a filter based on include_<name> and exclude_<name>
environment variables.
@param name: Name of the Filter.
@param attr: Name of the Attribute.
... | python | def envCheckFilter(self, name, attr):
"""Check if a specific graph attribute is enabled or disabled through
the use of a filter based on include_<name> and exclude_<name>
environment variables.
@param name: Name of the Filter.
@param attr: Name of the Attribute.
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aouyar/PyMunin | pymunin/__init__.py | MuninPlugin.envCheckFlag | def envCheckFlag(self, name, default = False):
"""Check graph flag for enabling / disabling attributes through
the use of <name> environment variable.
@param name: Name of flag.
(Also determines the environment variable name.)
@param default: Boolean (... | python | def envCheckFlag(self, name, default = False):
"""Check graph flag for enabling / disabling attributes through
the use of <name> environment variable.
@param name: Name of flag.
(Also determines the environment variable name.)
@param default: Boolean (... | [
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