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def round_float_to_str(val): """Function to round a float to our set number of sigificant digits Args: val (float): input value Returns: float: rounded float value """ return "{:.4f}".format(val)
def linearInterpolation(x1, x2, y1, y2, x): """ A default linear interpolation functions for the value x between two points p1 = (x1,y1) and p2 = (x2,y2). Parameters ---------- x : float The input x value Returns ------- y : float the output y value. """ ...
def is_empty(val): """Check if a variable is an empty string or an empty list.""" return val == "" or val == []
def extract_arxiv_links(urls): """ Try to find an arXiv link from a given list of URLs. :param urls: A list of URLs. :returns: First matching arXiv URL, or ``None``. """ arxiv_urls = [url for url in urls if "://arxiv.org" in url] if len(arxiv_urls) > 0: return arxiv_urls[0] else...
def alignment_error_rate(reference, hypothesis, possible=None): """ Return the Alignment Error Rate (AER) of an alignment with respect to a "gold standard" reference alignment. Return an error rate between 0.0 (perfect alignment) and 1.0 (no alignment). >>> from nltk.translate import Alignm...
def get_source_path(project_name): """ each project contains differents java_path """ paths = { "Chart": "source", "Closure": "src", "Lang": "src/java", "Lang2": "src/main/java", "Math": "src/main/java", "Math2": "src/java", "Mockito": "src", "Time...
def append(base_url, *args): """Append paths together.""" extension = '/'.join([u.strip('/') for u in args]) if extension: url = base_url.rstrip('/')+'/'+extension else: url = base_url return url
def is_palindrome(n): """ Fill in the blanks '_____' to check if a number is a palindrome. >>> is_palindrome(12321) True >>> is_palindrome(42) False >>> is_palindrome(2015) False >>> is_palindrome(55) True """ x, y = n, 0 f = lambda: y * 10 + x % 10 while x >...
def sanitise(string, replacements={'_' : '-'}): """ Substitute characters that are used as separators in the pathname and other special characters if required """ for c in replacements: string = string.replace(c, replacements[c]) return string
def getRowValList(CSVList): """ Expected Input: List of all rows within CSV file. Expected Output: List of columns within CSVList. """ valList = [] for row in CSVList: valList.append(row) valList.pop(0) return(valList)
def make_dict(title, quantity, percent): """ Small utility to create dictionary with title, quantity and percent Args: title: The title quantity: quantity percent: percent Returns: dict(dict): Dictionary """ return {"title": title, "quantity": quantity, ...
def from_task_key(key): """ Retrieves the coordinates of a tasks given its corresponding key :param key: the key to use :return: x and y coordinates of the task """ return key[0], key[1]
def replace_grid(old_grid, new_grid, topology_grid): """Replaces old hyperparameter search grid with one supplied by YAML.""" #print(old_grid,new_grid) for k in new_grid.keys(): if k != 'topology_grid': old_grid["--{}".format(k)] = new_grid[k] if 'topology_grid' in new_grid: topology_grid = new_grid.pop('top...
def is_leaf(node_value): """This function checks whether a validation node is a leaf or not. Args: node_value(dict): The value of the node you want to check. Returns: : bool. """ return isinstance(node_value, dict) and 'required' in node_value
def find_lcs(strings): """ Find longest common substring of all strings in list """ num_strings = len(strings) # Take first word from array as reference len_0 = len(strings[0]) results = set() for i in range(len_0): for j in range(i + 1, len_0 + 1): # generating all possi...
def double_digit(num): """ This returns two string digits """ if num > 9: return str(num) else: return "0" + str(num)
def incb(sstr: str): """ in_curly_braces """ return '{' + sstr + '}'
def shorten_message(message, max_length, ellipsis): """Shortens the message to at most max_length characters by using the given ellipsis. """ if max_length <= 0 or len(message) <= max_length: # Nothing to shorten. return message if len(ellipsis) >= max_length: # We cannot in...
def format_list(record_list): """Format a list into a string to increase readability in CSV""" # record_list should only be a list, not an integer, None, or # anything else. Thus this if clause handles only empty # lists. This makes a "null" appear in the JSON output for # empty lists, as expected...
def get_pairs(word): """ Args: word (tuple): tuple of symbols (symbols being variable-length strings). Returns: set: symbol pairs in a word. """ pairs = set() prev_char = word[0] for char in word[1:]: pairs.add((prev_char, char)) prev_char = char return p...
def fany(func, iterable): """ fany(func: function, iter: iterable) return true if any element x make func(x) == True args: func = x > 0, iter = [-1,0,1] return: True """ for x in iterable: if func(x): return True return False
def cell_empty(value) -> bool: """Checks if a cell is empty. Cells contain True or False return False""" if isinstance(value, bool): return False if not value: return True return False
def all_uppercase(title_words): """ if the words are all in uppercase >>> all_uppercase(["A", "B", "C"]) True >>> all_uppercase(["A", "12B", "C12"]) True >>> all_uppercase(["A", "12B", "c12"]) False """ concat_str = ''.join(title_words) return concat_str.upper() == concat_st...
def lengthOfLastWord(s): """ :type s: str :rtype: int """ if s.strip() == '': return 0 list_ = s.strip().split(" ") for i in range(list_.count('')): list_.remove('') return len(list_[-1])
def disjoint2(a, b, c): """Return True if there is no element common to all three lists.""" for i in a: for j in b: if i == j: # only check c if we found match from a and b. return False for k in c: if i == k: # (and thus i == j == k) ...
def _node_create_dict(nodes): """ Convert a set of :class:`.Node` objects into a dictionary of :class:`.Node` lists, keyed by frozenset(labels). :param nodes: :return: dict of frozenset(labels) to list(nodes) """ d = {} for node in nodes: key = frozenset(node.labels) d.setde...
def qualified_column(column_name: str, alias: str="") -> str: """ Returns a column in the form "table.column" if the table is not empty. If the table is empty it returns the column itself. """ return column_name if not alias else f"{alias}.{column_name}"
def eccentricity_earth_orbit(julian_century): """Returns the Eccentricity or Earth Orbit with Julian Century, julian_century.""" ecc_earth_orb = 0.016708634 - julian_century * ( 0.000042037 + 0.0000001267 * julian_century ) return ecc_earth_orb
def float2Fixed(value): """The float2Fixed method translates a float into a 1/64 pixel unit-value.""" return int(round(value * 64))
def db_list_maker(info): """ Creates a list from a tuple of lists. :param info: Tuple of Lists :return: List """ answer = [] for i in info: answer.append(i[0]) return answer
def get_max_len(api_table_database): """ Return the max text length for Prototype, Description and Parameters field of API table """ pro_len = 0 des_len = 0 par_len = 0 for idx, details in api_table_database.items(): pro_idx = 5 + details[2] - 1 if pro_len < len(details[pro_idx]): pro_len = len(details[p...
def parse_number(x): """ Parse argument as int or float. """ try: return int(x) except ValueError: return float(x)
def exponential_scaling(base, exponent): """Behold, exponents that don't die with negative values.""" if base>0: return abs(base)**exponent else: return -(abs(base)**exponent)
def _uniq(iterable): """Returns a list of unique elements in `iterable`. Requires all the elements to be hashable. Args: iterable: An iterable to filter. Returns: A new list with all unique elements from `iterable`. """ unique_elements = {element: None for element in iterable} ...
def get_keypress_event_trigger_key(event: str) -> int: """Find the key number which triggers particular keypress event.""" comparison_str = "e.which == " if comparison_str not in event: return -1 comparison_start = event.index(comparison_str) + len(comparison_str) comparison_end = event.find...
def UpdateGuessWord(Input, alphabet_guess_already): """update new Input to alphabet_guess_already""" alphabet_guess_already.append(Input) return alphabet_guess_already
def get_order_update_critical_section_key(order_id): """ :param order_id: the pk of the order :return: the key to be used with CriticalSection for preventing multiple threads from updating the same order at the same time """ return 'zipline-updating-order-id-{}'.format(order_id)
def craft_invalidator_key(prefix: str, db_table: str, conj: dict) -> str: """ this function will generate the invalidator key from the invalidator key, we can invalidate old data invalidate_key -> data_key -> data the invalidator key will have the following format [prefix]conj:db_name:field1=v...
def list_to_tuples(list_to_pair, pair_length): """Pairs elements of list into tuples of pair_length Args: list_to_pair (List) pair_length (int) Returns: List of tuples """ # Create N copies of the same iterator it = [iter(list_to_pair)] * pair_length # Unpack the co...
def parse_coeff_line(coeff_str): """ split str coef to float list :param coeff_str : line coef :type coeff_str : str :return coeff list :rtype list() """ return [float(el) for el in coeff_str.split()]
def format_name(name): """ Format parameter names for output Parameters ---------- name: str Name to be formatted Returns ------- str: Formatted name """ name = name.replace("_", " ") return name
def _to_base(n, base): """Transforms an integer to another defined base.""" len_base = len(base) if n < len_base: return base[n] else: return _to_base(n // len_base, base) + base[n % len_base]
def next_p2 (num): """ If num isn't a power of 2, will return the next higher power of two """ rval = 1 while (rval<num): rval <<= 1 return rval
def _concat(left: str, right: str) -> str: """Convenience function Takes two string representations of regular expressions, where the empty string is considered as matching the empty langage, and returns a string representation of their concatenation. """ if len(left) > 0 and len(right) > 0: ...
def npasser(inbox, n=None): """ Passes "n" first inputs from inbox. By default passes the whole inbox. Arguments: - n(``int``) [default: ``None``] """ return inbox[:n]
def drop(i_list: list,n:int) -> list: """ Drop at multiple of n from the list :param n: Drop from the list i_list every N element :param i_list: The source list :return: The returned list """ assert(n>0) _shallow_list = [] k=1 for element in i_list: if k % n != 0: ...
def hexify(number): """Produce hex string of the given number with leading '0x' removed.""" return hex(number)[2:]
def is_truthy(candidate_value): """ Converts many representations of "True" into a boolean True @param: candidate_value - the value to be evaluated. Any of the following will be considered True "true", "TRUE", "True", "1", any number except zero, True """ if isinstance(candidate_value, str): ...
def is_rule(fun): """ Returns whether something is a rule or not """ is_callable = hasattr(fun, '__call__') return is_callable and hasattr(fun, "is_rule") and fun.is_rule
def out_of_bounds(cell_size, pos) -> bool: """ Checks whether a position is out of the game board. :param cell_size: Board size as array :param pos: tuple (x, y) :return: bool """ x, y = pos return x < 0 or x >= cell_size[1] or y < 0 or y >= cell_size[0]
def list_is_flat(l): """Determine if the given list is flat (only check for other lists, not other iterables). """ for x in l: if isinstance(x, list): return False return True
def get_api_url_from_base(base_url): """Get the full URL given a base URL""" if base_url.endswith("/") != True: base_url += "/" base_url += "api/workflows/" return base_url
def t_ana(i, j, k, dz, dx, dy, zsa, xsa, ysa, vzero): """Calculate analytical times in homogeneous model.""" return ( vzero * ((dz * (i - zsa)) ** 2.0 + (dx * (j - xsa)) ** 2.0 + (dy * (k - ysa)) ** 2.0) ** 0.5 )
def process_template(pairs, rules): """ process dict of pairs with list of rules """ new_pairs = {} for pair in pairs: if pair in rules: cnt = pairs[pair] new_pairs[pair[0] + rules[pair]] = ( new_pairs.get(pair[0] + rules[pair], 0) + cnt ) ...
def _get_prog_path(env, key, name): """Try to find the executable 'name' and store its location in env[key].""" # check if the user already specified the location try: return env[key] except KeyError: pass # asciidoc and a2x may be installed with a '.py' suffix prog_path = env....
def connack_string(connack_code): """Return the string associated with a CONNACK result.""" if connack_code == 0: return "Connection Accepted." elif connack_code == 1: return "Connection Refused: unacceptable protocol version." elif connack_code == 2: return "Connection Refused: ...
def basic(x_old, r=3.9): """Logmap update dynamics (1 step) :param float x_old: current value :param float r: parameter :return: next value """ x_new = r * x_old * (1.0 - x_old) return x_new
def quantile(values, q): """ Returns q-th quantile. """ values = sorted(values) size = len(values) idx = int(round(size * q)) - 1 if idx == 0: raise ValueError("Sample size too small: %s" % len(values)) return values[idx]
def lai(params: dict, states: dict) -> float: """ Calculates leaf area index Parameters ---------- params: dict sla: float Specific leaf area. [m2 {leaf} mg-1 {CH2O}] states: dict CLeaf: float Carbohydrates stored in the leaves [mg m-2] Returns ...
def coord_while(n, a=0, b=1): """Function does the same thing as coord_for but uses a while loop instead of for.""" a=float(a) b=float(b) coords=[] num=a while num!=(n+1): coords.append((b-a)*num/n) num=len(coords) return coords
def getColumnLocations(columnNumber): """ Return a list of all nine locations in a column. :param int rowNumber: Column :return: List of tuples :rtype: list """ return [(row, columnNumber) for row in range(9)]
def crf_kernel_config(defn): """Creates a default kernel configuration for sampling the dish assignment using the "Posterior sampling in the Chinese restaurant franchise" Gibbs sampler from Teh et al (2005) Parameters ---------- defn : LDA model definition """ return ['crf']
def is_boc(lbl, iob, prev_lbl, prev_iob, otag='O'): """ is beginning of a chunk supports: IOB, IOBE, BILOU schemes - {E,L} --> last - {S,U} --> unit :param lbl: current label :param iob: current iob :param prev_lbl: previous label :param prev_iob: previous iob :...
def ReadFile(filename): """Reads a list of numbers from a file. filename: string returns: list of float """ fp = open(filename) data = [] for line in fp: x = float(line.strip()) data.append(x) return data
def argmin(arr, f): """Return the index, i, in arr that minimizes f(arr[i])""" m = None i = None for idx, item in enumerate(arr): if item is not None: if m is None or f(item) < m: m = f(item) i = idx return i
def merge(tree1, tree2): """Merges two Splay trees, tree1 and tree2, using the last element (of highest rank) in tree1 (left string) as the node for merging, into a new Splay tree. CONSTRAINTS: None. INPUTS: tree1, tree2. OUTPUT (the return value of this function) is tree1, with all the elements of ...
def parse_remote(path,loopback=False,login_flag=False): """parse remote connection string of the form ``[[user@]host:]path`` Args: path (str): remote connection string. loopback (bool, default=False): if True, ensure *host* is used. login_flag (bool, default=False): if True, prepend use...
def build_tree(list_of_strings): """Function takes a list of strings, ie: user.address.city user.address.postcode user.name.first user.name.last user.age And builds a tree of nested dictionaries. """ tree = {} node = tree for key in list_of_strings: if '.' in key: ...
def parse_error(bad_token): """Returns an error message and the token causing it """ return {"error": f"parsing error, invalid token [{bad_token}] found"}
def epsilon_tensor(i, j, k): """Rank-3 epsilon tensor Based on https://codegolf.stackexchange.com/a/160375 """ test_set = set((i, j, k)) if not (test_set <= set((1, 2, 3)) or test_set <= set((0, 1, 2))): raise Exception("Unexpected input", i, j, k) return (i - j) * (j - k) * (k - i) / ...
def prone_rewards(rewards): """Prone reward to be between 0 to 1s """ if isinstance(rewards, list): return [max(min(r, 1), 0) for r in rewards] return max(min(rewards, 1), 0)
def square_rect_deindex(index, rect_x, rect_y, width, height): """Performs the inverse of square_rect_index Equivalent to list(square_rect(...))[index]""" dx = index % width dy = index // width assert dx >= 0 and dy < height return (rect_x + dx, rect_y + dy)
def get_handedness(sys): """Return the handedness of the coordinate system sys, as seen from inside the celestial sphere, in the standard IAU convention.""" if sys in ["altaz","tele","bore"]: return 'R' else: return 'L'
def pyramid_steps_concat(n): """Return a list of "n" progression pyramid steps, concatenating the parts.""" result = [] for i in range(1, n + 1): result.append((" " * (n - i)) + ("#" * (i * 2 - 1)) + (" " * (n - i))) return result
def assemble_transcripts(run_parallel, samples): """ assembly strategy rationale implemented as suggested in http://www.nature.com/nprot/journal/v7/n3/full/nprot.2012.016.html run Cufflinks in without a reference GTF for each individual sample merge the assemblies with Cuffmerge using a reference G...
def get_peer_name(cert): """Extract the client name from an SSL certificate Parameters: cert (dict): SSL certificate Returns: str: Client name """ subject = cert['subject'] for x in subject: if x[0][0] == 'commonName': return x[0][1]
def clean_line(url): """Clean input line""" return url.rstrip('\n')
def curvatures_bending_plate(m1, m2, m12, D, poisson): """ Calculates the curvature values on a plate caused by bi-directional bending. """ k1 = (1 / (D * (1 - poisson ** 2))) * (m1 - poisson * m2) k2 = (1 / (D * (1 - poisson ** 2))) * (m2 - poisson * m1) k12 = (1 / (D * (1 - poisson))) * m12 ...
def _interval_to_seconds(interval, valid_units='smhdw'): """Convert the timeout duration to seconds. The value must be of the form "<integer><unit>" where supported units are s, m, h, d, w (seconds, minutes, hours, days, weeks). Args: interval: A "<integer><unit>" string. valid_units: A list of suppor...
def Soluvw(u, v, w): """ Given positive numbers u and v, gives one solution to the equation x*u + y*v = w where x and y are numbers in the interval [0,1]. If there is no solution, gives False, if solution exists, gives the 'average' solution x = (x_min+x_max)/2 or y = (y_min+y_max)/2. """ if (w<...
def ap(helplist, format_, sep=', '): """Little helper to enforce consistency""" if helplist == '-': return helplist ls = [format_ % x for x in helplist] return sep.join(ls)
def minValue(inputArray): """ minValue Function used to calculate the minimum value of an array @param inputArray Array passed for calculation @return minValueReturn The integer value returned by the calculation """ minValueReturn = min(inputArray) return minValueReturn
def get_time(start_time, end_time): """Get ellapsed time in minutes and seconds. Args: start_time (float): strarting time end_time (float): ending time Returns: elapsed_mins (float): elapsed time in minutes elapsed_secs (float): elapsed time in seconds. """ elapsed_...
def auto_converter(s): """automaticaly convert string to the int or float""" for fn in int, float: try: return fn(s) except ValueError: pass return s
def parse_accept_language(accept_header): """ Taken from: https://siongui.github.io/2012/10/11/python-parse-accept-language-in-http-request-header/ """ languages = accept_header.split(",") locale_q_pairs = [] for language in languages: if language.split(";")[0] == language: ...
def color(r, g, b): """Convert an RGB triplet of 0-255 values to a 24 bit representation.""" if r < 0 or r > 255 or g < 0 or g > 255 or b < 0 or b > 255: raise ValueError('Color values must be 0 to 255.') return (r << 16) | (g << 8) | b
def func_extract_all_version_ids(project_version_mapping): """ :param project_version_mapping: :return: version id list """ ids = [] for tmp in project_version_mapping.values(): ids.extend([_.id for _ in tmp]) return ids
def EnumCrossRefLabel(enum_name): """Enum cross reference label.""" return 'envoy_api_enum_%s' % enum_name
def codacy_result(hit, path): """Convert a hit to the Codacy result format :param hit : a cfn-lint hit in json format :param path: the path of the file where the hit occured :return : dictionary conforming to the Codacy format """ return dict(filename=path, message=hit["Message...
def accuracy(results): """ Evaluate the accuracy of results, considering victories and defeats. Args: results: List of 2 elements representing the number of victories and defeats Returns: results accuracy """ return results[1] / (results[0] + results[1]) * 100
def get_reviewer_type(level): """ Creates the type of reviewer based on the level returns: type string """ if level == 'lvl1' or level == 'lvl2': return 'contractor' else: return 'federal employee'
def values_in_multilevel_dct(dct, key1, key2, fill_val=None): """ Obtain a dictionary value where dct[key1][key2] """ dct2 = dct.get(key1, None) if dct2 is not None: val = dct2.get(key2, fill_val) else: val = fill_val return val
def multi_find(input_string, substring, start, end): """ Describe your function :param : :return: :raises: """ result = "" return result
def snapshots_to_send(source_snaps, dest_snaps): """return pair of snapshots""" if len(source_snaps) == 0: raise AssertionError("No snapshots exist locally!") if len(dest_snaps) == 0: # nothing on the remote side, send everything return None, source_snaps[-1] last_remote = dest_s...
def produce_tel_list(tel_config): """Convert the list of telescopes into a string for FITS header""" tel_list = "".join("T" + str(tel) + "," for tel in tel_config["TelType"]) return tel_list[:-1]
def strictly_increasing(L): """https://stackoverflow.com/a/4983359""" return all(x<=y for x, y in zip(L, L[1:]))
def normalize_interval(interval: int) -> int: """Return a normalized interval. Normalized intervals: 1: Monthly (every month) 3: Quarterly (every three months) 6: Biannual (two times a year) 12: Annual (once a year) """ if interval < 1 or interval > 12: raise V...
def _make_dense_feature_vector(instance, transformers): """Make dense feature vector with value as elements.""" if len(transformers) == 1: # The feature has only one source column. transformer = transformers[0] return transformer.get_value_and_transform(instance) else: feature_vector = [] for ...
def clientlogin(token): """ Authorization: header to pass to self.client.{get,post}() calls:: self.client.post(url, data, **clientlogin(token)) """ return {'HTTP_AUTHORIZATION': 'GoogleLogin auth={0}'.format(token)}
def compute_distance(point1, point2): """ Computes distance between 2 points in a 2D space :param point1: :param point2: :return: distance """ import math return math.sqrt((point1[0] - point2[0])**2 + (point1[1] - point2[1])**2)