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def extract_media(request): """Extract the media from a flask Request. To avoid race conditions when using greenlets we cannot perform I/O in the constructor of GcsObject, or in any of the operations that modify the state of the service. Because sometimes the media is uploaded with chunked encoding, ...
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from datetime import datetime def time_string_one(float_time=None, fmt=None): """ Transform a single float daytime value to string. Parameters ---------- float_time : float, optional Input time. The default is None, which returns the time now. fmt : float, optional Tim...
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def _indent(level): """Returns leading whitespace corresponding to the given indentation `level`. """ indent_per_level = 4 return ' ' * (indent_per_level * level)
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import os import fnmatch def find_matches(sdir,pattern): """ Walk sdir and find all files and dirs the match given pattern. """ matches = [] for root, dirs, files in os.walk(sdir): all = [] all.extend(dirs) all.extend(files) for item in fnmatch.filter(all, pattern):...
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def get_lr(optimizer): """Assume that the optimizer has single lr""" lr = optimizer.param_groups[0]["lr"] return lr
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def decode_dram(site): """ Decode the modes of each LUT in the slice based on set features. Returns dictionary of lut position (e.g. 'A') to lut mode. """ lut_ram = {} lut_small = {} for lut in 'ABCD': lut_ram[lut] = site.has_feature('{}LUT.RAM'.format(lut)) lut_small[lut] = sit...
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import ast def add(*arguments): """ Add function. """ return ast.Add(*arguments)
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def perpendicular_vector(v): """ Compute a vector perpendicular to the input vector """ # x = y = z = 0 is not an acceptable solution if v[0] == v[1] == v[2] == 0: raise ValueError("zero-vector") if v[2] == 0: return [-v[1], v[0], 0] else: return [1.0, 1.0, -1.0 * (...
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def get_hover_data(df): """ Creates and formats the hover string over the map data points :param df: Pandas dataframe :return: list: A string of dataframe row information formatted for hover. """ details_labels = ["needothers","detailmed", "detailrescue"] hover_string_list = [] for index...
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def join_with_oxford_comma(template, items, separator=','): """Joins template with oxford comma rule""" return template.format(f'{separator} '.join(items))
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def clip(threshold=0.5): """ clip the tensor """ dict_binarize = {'name': 'scale_range', 'kwargs': {'threshold': threshold} } return dict_binarize
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def find_stim_channel(raw): """ Finds the appropriate stim channel from raw. Heuristically just looks for STI101 or STI014. Parameters ---------- raw : mne.io.Raw The raw object Returns ------- str Channel name of the stimulus channel. """ channels = raw.info.g...
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def parse_chunk_header_file_range(file_range): """Parses a chunk header file range. Diff chunk headers have the form: @@ -<file-range> +<file-range> @@ File ranges have the form: <start line number>,<number of lines changed> Args: file_range: A chunk header file range. Returns: A tuple (ran...
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from typing import Any def raise_if_incorrect_type(obj: object, expected_type: Any): """ general function to check obj type raise error when it is incorrect Parameters ---------- obj: Object any object expected_type: Any any class or type Returns ------- true...
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def addOneContraints(d, Ca): """ Ajoute une conditions de Robinson qui ne sont pas encore satisfaites à Ca """ addedConstraints = False precision=0.0001 # print 'Contraintes ajoutees' for i in range(d.n-2): for j in range(i+2, d.n): if (d[i,j] < d[i,j-1] - precision) and ([i,j,i...
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import re def remove_puncatuation(review_str:str)->str: """remove puncatuation of a string """ return re.sub(r'[^\w\s]', '', review_str)
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from typing import Dict from typing import Any from typing import Optional from typing import Callable def try_get_from_dict(data: Dict[str, Any], key: str, original_value: Any, conversion: Optional[Callable[[Any], Any]] = None) -> Any: """Try to get value from dict, otherwise set default value""" if not key ...
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import pathlib def get_root_dir(): """Return the root directory, as a :class:`pathlib.Path`. This tries to smart-detect the best location to host PythonUp. It tries `~/Library`, which likely only exists on Macs; if that does not exist, use the Linux standard `~/.local/share` instead. """ maco...
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def default_trans_model(): """Return the default transaction model.""" return { 'addresses': {'SingleLocation': {'city': 'Irvine', 'country': 'US', 'line1': '123 Main Street', 'post...
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from typing import Optional import re def split_str(source, sep: Optional[str] = None): """ warning: does not yet work if sep is a lookahead like `(?=b)` usage: >> splitStr('.......A...b...c....', sep='...') <generator object splitStr.<locals>.<genexpr> at 0x7fe8530fb5e8> >> list(...
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def memoize(obj): """Memoize function parameters and their output.""" cache = {} def memoizer(*args, **kwargs): if args not in cache: cache[args] = obj(*args, **kwargs) return cache[args] return memoizer
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def as_float(s): """Returns a float from a string """ if not s: return 0.0 return float(s)
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from typing import Callable from typing import Iterable from typing import Dict def count_valid_passports( validation_func: Callable, passports: Iterable[Dict[str, str]] ) -> int: """count the valid passports (those who have all keys""" return sum(map(validation_func, passports))
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import os def get_file_path_from_import_definition(import_definition: str) -> str: """ Determines the file path of an imported file from a Python import definition. :param import_marker: The line which contains the Python import definition. :returns: The file path of the imported file. """ p...
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import json def json_object_to_str(json_obj): """ json对象序列化为json串 :param json_obj: json对象 :return: 序列化的json串 """ return json.dumps(json_obj, ensure_ascii=False)
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def power_of(x): """create a inner function to return the power of x""" def inner_func(y): return x**y return inner_func
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def get_positions(console): """ Compute a dictionary keyed by button names with horizontal alignment, and column/row location to show each choice on the EV3 LCD console. Parameter: - `console` (Console): an instance of the EV3 Console() class returns a dictionary keyed by button names with colum...
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def generate_patch_transfer_job_message(messages, job): """Generates Apitools patch message for transfer jobs.""" project_id = job.projectId job.projectId = None if job.schedule == messages.Schedule(): # Jobs returned by API are populated with their user-set schedule or an # empty schedule. Empty sched...
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import logging def parse_requirements(file_): """Parse a requirements formatted file. Traverse a string until a delimiter is detected, then split at said delimiter, get module name by element index, create a dict consisting of module:version, and add dict to list of parsed modules. Args: ...
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def duplicate(somelist): """ biore binary search na srodku listy sprawdzam :param somelist: :return: """ emptylist = [] for i in somelist: if len(emptylist) == 0: emptylist.append(i) else: if i in emptylist: return i em...
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def get_handler_filename(handler): """Shortcut to get the filename from the handler string. :param str handler: A dot delimited string representing the `<module>.<function name>`. """ module_name, _ = handler.split('.') return '{0}.py'.format(module_name)
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def parseEPSGCode(string, parsers): """ parse EPSG code using provided sequence of EPSG parsers """ for parser in parsers: epsg = parser(string) if epsg is not None: return epsg return None
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import re def get_value_for_key(text_buffer, key): """Parsing value from a line with key=value""" for match in re.finditer("%s=(?P<value>.*)" % key, text_buffer): return match.group('value') return ""
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import pathlib def _is_valid_doc_version(folder: pathlib.Path) -> bool: """ Test if a version folder contains valid documentation. A version folder contains documentation if: - is a directory - contains an `index.html` file """ if not folder.is_dir(): return False if not (fold...
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def gen_explicit_map_one_delta(params_pt, args_pt, k_ms, k_pt): """ Generate explicit_map for which include mapping relationship is `1 - k_ms = k_pt`. Args: params_pt (dict): Params for APIPt. args_pt (dict): Args for APIPt. Returns: dict, map between frames. """ value ...
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def strip_comments(l: str) -> str: """ Strip any ``#`` comments from a line. :param str l: A string line, which may contain ``#`` comments :return str clean_line: The line ``l`` - stripped of any comments and excess whitespace. """ return l.split('#', 1)[0].strip()
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def shengbte_code(aiida_local_code_factory): """Get a shengbte code. """ shengbte_code = aiida_local_code_factory(executable='diff', entry_point='shengbte') return shengbte_code
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import mimetypes def get_content_type(content, name): """ Checks if the content_type is already set. Otherwise uses the mimetypes library to guess. """ if hasattr(content.file, "content_type"): return content.file.content_type else: mime_type, encoding = mimetypes.guess_type(na...
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def in_or_none(x, L): """Check if item is in list of list is None.""" return (L is None) or (x in L)
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def _clean_timeformat(text): """returns an ISO date format from a funny calibre date format""" if text.endswith("+00:00"): text = text[:-6] + "+0000" if text[10] == " ": text = text.replace(" ", "T", 1) return text
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from io import StringIO def image2str(img): """Converts PIL Image object to binary data. @param img: PIL Image object @return: binary data """ f = StringIO() img.save(f, "JPEG") return f.getvalue()
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def apply(R,point): """Applies the rotation to a point""" return (R[0]*point[0]+R[3]*point[1]+R[6]*point[2], R[1]*point[0]+R[4]*point[1]+R[7]*point[2], R[2]*point[0]+R[5]*point[1]+R[8]*point[2])
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def auto_delete_file_on_change(sender, instance, **kwargs): """ Deletes old file from filesystem when corresponding `MediaFile` object is updated with new file. """ if not instance.pk: return False
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def update_sub(orig_df, pivot_col=None, pivot_val=None, new_col=None, new_val=None): """ update a subset of DataFrame based on fixed boolean matching. """ out_df = orig_df.copy() out_df.loc[out_df[pivot_col] == pivot_val, new_col] = new_val return out_df
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def buffer(ft): """ Buffer an input feature by 10km """ return ft.buffer(10000).bounds(5)
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def alpha_jacobian(**opts): """The jacobian of the change of variables between virtuality and the alpha parameter of the rescaling collinear mapping. """ Q = opts['Q'] pC = opts['pC'] qC = opts['qC'] return Q.dot(qC)/Q.dot(pC)
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def has_new_triggerword(predictions, chunk_duration, feed_duration, threshold=0.5): """ Function to detect new trigger word in the latest chunk of input audio. It is looking for the rising edge of the predictions data belongs to the last/latest chunk. Argument: predictions -- predicted labels f...
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def _password_repr(val: str) -> str: """Change representation of password to hide its content.""" del val return "'********'"
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def beaufort(wind): """ https://en.wikipedia.org/wiki/Beaufort_scale """ if wind >= 32.7: return "12 hurricane" elif wind > 28.5: return "11 violent storm" elif wind > 24.5: return "10 violent storm" elif wind > 28.5: return "9 violent storm" elif wind > 17.2: return "8 gale" elif ...
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import pandas def stackDF(df, column_names = ["column1","column2","values"], symmetric = True ): """Stacks similarity dataframe by return column1, column2, values df Args: df: pandas data frame column_names: names of return df (default ["column1","column2","values"] ) symmetric (...
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import subprocess def rsync_file(infile, outdir): """Rsyncs a file from the correlator machines to dsastorage. Parameters ---------- infile : str The sourcefile string, e.g. 'corr01.sas.pvt:/home/user/data/fl_out.1.5618974' outfile : str The destination string, e.g. '/home/user/da...
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def format_cpus(n): """Formats n as a number of CPUs""" return '{:.1f}'.format(n)
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def from_str_to_bool(string): """ # Notes converts string to boolean value. # Arguments - string: string, either one of these values: "true", "false" """ res = string.lower() if res == 'true': return True else: return False
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def callback(f, *a): """ Vraci funkci f s nastavenym parametrem a. Tato funkce umi osetrit i vice nez jeden parametr. Pouziti: callback(funkce, arg1, arg2, ..., argn ) """ return lambda: f(*a)
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def _intersect_items(baselist, comparelist): """Return matching items in both lists.""" return list(set(baselist) & set(comparelist))
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def bin_to_int(bin_list, inverse=True): """ Given arbitrary length list of binary values, calculate integer value. Parameters ---------- bin_list : list of int List of binary values for calculating integer value. inverse : bool, optional If true (default) caluclate integer from bin_...
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def get_chem_names(particles): """ Create a list of chemical names for the dispersed phase particles Reads the composition attribute of each particle in a `particles` list and compiles a unique list of particle names. Parameters ---------- particles : list of `Particle` objects ...
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import requests def get_APOD(date): """This will do the request on the NASA api""" payload = 'https://api.nasa.gov/planetary/apod' params = {'api_key' : 'DEMO_KEY', 'date' : date} response = requests.get(payload, params = params) return response.json()
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import re def replace_with_dict( s, d ): """ replaces the substrings in the dictionary keys with their values Parameters ---------- s: string d: dict Returns ------- string Examples -------- >>>s1 = "asdf qwer" >>>d1 = { 'asdf', 'foo' } >>>d2 = { 'qwer', 'bar...
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import numpy as np def mape(predictions, actuals): """ Calcuate Mean Absoute Percentage Error (MAPE) Reported as percentage Parameters ---------- predictions: numpy array of predicted values actuals: numpy array of actual values Returns ------- Returns float of calculate...
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def env_cfg_path() -> str: """Get a L5 environment config file from artefacts. Note: the scope of this fixture is "session"-> one per test session :return: the L5Kit gym-compatible environment config python dict """ env_cfg_path = "./l5kit/tests/artefacts/gym_config.yaml" return env_cfg_path
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def to_timestamp(value): """ Convert datetime to a timestamp string MediaWiki would understand. :type value: datetime :rtype str """ # datetime.isoformat() wouldn't work because it sometimes produces +00:00 # that MW does not support. # Also perform sanity check here to make sure this is...
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def provide_help(): """ send an api syntax error status and show the correct usage of the api Return: return a dictionary with keys 'syntax', 'status' , 'description' specifying error & help """ # reference syntax syntax_str = 'HOST:PORT/geocode?address=ADDRESS' # description of par...
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def rmask_byte(num_mask_bits,value): """ This function applies a right-justified mask of a specified number of bits to an unsigned integer representing a single byte value. >>> rmask_byte(3,list(b'\\xff')[0]) 7 >>> bin(7) '0b111' """ return ((1<<(num_mask_bits))-1) & value
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def verify_token(token: str) -> str: """ Mock google and fb auth. :param token: email :return: email """ return token.strip()
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def data_topology_get(): # noqa: E501 """data_topology_get returns topology.Topology # noqa: E501 :rtype: TopologyTopology """ return 'do some magic!'
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def printif(string: str, pre_sep: str = " ", post_sep: str = " ") -> str: """Print `string` if `string` is not null.""" if string not in [None, ""]: return f"{pre_sep}{string}{post_sep}" return ""
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import argparse def sliding_tokenize(article: str, tokenizer, args: argparse.Namespace, task=None) -> tuple: """Tokenization function for sliding window approach.""" sentences = tokenizer(article, max_length=args.max_seq_length, truncation=True, ...
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from io import StringIO def GetLines(data, strip=False): """Returns a list of all lines in data. Args: strip: If True, each line is stripped. """ ret = StringIO(data).readlines() if strip: ret = [x.strip() for x in ret] return ret
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def has_an_update(page_data: dict, tracker_data: dict) -> bool: """Checks if there was an update comparing two story mappings of the same story. Arguments: page_data {dict} -- Requested story mapping, from `get_story_data`. tracker_data {dict} -- Story mapping from the tracked list. Re...
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def meaning(of=None): """The meaning of life?""" if of == "life": return 42 return None
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import codecs import json from typing import OrderedDict def _load_json_result(result_file): """ Load the result file as utf-8 JSON and strip test_dir prefix from locations. Sort the results by location. """ with codecs.open(result_file, encoding='utf-8') as res: scan_result = json.loa...
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from typing import Callable from typing import Any from typing import OrderedDict def multimap(f: Callable, *xs: Any) -> Any: """ Each x in xs is a tree of the same structure. Apply f at each leaf of the tree with len(xs) arguments. Return a tree of the same structure, where each leaf contains f's ret...
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def get_atom_target_index(target_index, input_index, resindices): """get target indices of input atom Arguments: target_index {array} -- target(native) residue index input_index {array} -- input residue index resindices {array} -- target residue index of input atoms Returns...
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def array_from_where(process, where): """Get array of scannables from provided parameter""" if where == 'all': return process.pages if where == 'pages': return process.pages if where == 'modules': return process.modules if not where is None: return [module for module ...
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def inside_string(i, j, string_ranges): """Returns true if the range described by i and j is contained within a range in the list string_ranges""" for s, e in string_ranges: if i >= s and j <= e: return True return False
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def cast_ext(ext: str) -> str: """Convert ext to a unified form.""" ext = ext.lower() if ext == 'jpeg': ext = 'jpg' return ext
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def filter_reply_msg(top_indices, top_cosine, cosine_cut_off, count_cutoff): """ Filter out responses 1. cosine similarity < cosine_cut_off 2. too short replies (word count <= count_cutoff) 3. replies contain other special characters :type pandas DataFrame: response_df :type float: cosi...
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def low_frequency_accuracy(sent_test_tags, sent_pred_tags, counter): """ sent_test_tags: # [[{'start_idx': 7, 'end_idx': 12, 'text': '東芝キヤリア'}, {'start_idx': 14, 'end_idx': 19, 'text': 'ダイキン工業'}], [{'start_idx': 0, 'end_idx': 1, 'text': '東芝'}, {'start_idx': 27, 'end_idx': 32, 'text': 'ダイキン工...
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from typing import List from typing import Tuple def count_chunks(alignment: List[Tuple[int, int]]) -> int: """ Find the minimum number of chunks the alignment can be grouped into. """ alignment = sorted(alignment) num_chunks = 0 last_h, last_r = -2, -2 for (h, r) in alignment: if...
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from typing import Any from typing import List from typing import Optional def verify_trim(trims: Any) -> List[Optional[int]]: """Basically just to satisfy mypy. My trims should *always* be a tuple.""" return list(trims) if isinstance(trims, tuple) else [None, None]
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def get_reference_output_files(reference_files_dict: dict, file_type: str) -> list: """ Returns list of files matching a file_type from reference files Args: reference_files_dict: A validated dict model from reference file_type: a file type string, e.g. vcf, fasta...
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def close_noscript(tag): """Return a string with each closing parent tags for escaping a noscript""" s = "" if tag.findParent("noscript"): curr = tag.parent while True: s += "</{0}>".format(curr.name) if curr.name == "noscript": break curr ...
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import hashlib def testfunc(res, i): """Return a hash of the index plus the other results.""" m = hashlib.md5() m.update(str(i).encode('utf-8')) for r in res: m.update(r.encode('utf-8')) return m.hexdigest()
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def clasificar(a1: float, a2: float, a3: float) -> str: """ Retorna 'Equilatero' si el triángulo es equilatero, 'Isóceles' si es isóceles y 'Escaleno' si es escaleno. """ if a1 == a2 and a1 == a3 and a2 == a3: retorno = "Equilatero" elif a1 == a2 or a1 == a3 or a2 == a3: retorno ...
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def pretty_print_prime_rules(primes): """Prints pyboolnet a prime dictionary as Boolean rules The output format is of the form: A* = B & C | !D, for example. Parameters ---------- primes : pyboolnet primes dictionary Update rules to print. """ if primes is None: return...
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import os def createfolders(foldername_list): """Create the folder structure specified by the list.""" path = '' for s in foldername_list: if s != '/': path = path + s + '/' try: os.makedirs(path) except OSError as e: if os.path.exists(path): print...
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def is_trivial_pair(p): """Is the critical pair trivial?""" u, v = p; return u == v
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def normalize_meaning(source_string): """Escape all HTML tags if any""" flag = 0 index = 0 # Trash is a list containing all the html tags found in the source string trash = [] for c in source_string: if c == '<': # Flag the start of the html tag flag = index ...
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def get_heart_rate_units_str(): """Returns the units in which heart rate is displayed.""" return "bpm"
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def cut_list(list, length): """ This function allows to cut a list into parts of a certain length. It returns a new list which takes less memory and contains for each index a part of the initial list. Args : list : list of the images path of the whole database\n length (int)...
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import json def _convert_vars_to_json(env_dict): """Converts 'variables' in the given environment dict into string.""" if ('variables' in env_dict and isinstance(env_dict.get('variables'), dict)): env_dict['variables'] = json.dumps(env_dict['variables']) return env_dict
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def getprimarymode(image_list, bid): """Determine the primary mode of the science frame for the block """ primary_mode=None instr=[] obsmode=[] detmode=[] for img in image_list: if img[10]==bid: instr.append(img[5]) obsmode.append(img[6]) detmode.append(img[7])...
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def flatten_probas(preds, targets, ignore=None): """ Flattens predictions in the batch """ B, C, H, W = preds.size() preds = preds.permute(0, 2, 3, 1).contiguous().view(-1, C) # B * H * W, C = P, C targets = targets.view(-1) if ignore is None: return preds, targets valid = (targ...
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def to_float(num): """ 引数をFloatに変換します。 """ return float(num) if type(num) is str else num
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from functools import reduce def merge(s, p): """Merge union-find s with permutation p (as cycles).""" def find(x): while s[x] != x: x = s[x] return x def union(x, y): x = find(x) s[find(y)] = x return x for cycle in p: reduce(union, cycle) ...
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def pluralize( string ): """ Correctly convert singular noung to plural noun. """ if string.endswith('y'): plural = string[:-1] + 'ies' elif string.endswith('us'): plural = string[:-2] + 'i' else: plural = string + 's' return plural
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import csv def get_sampleID_and_sex(args): """ Retrieve sample IDs (samples with "-T*") and patient sex from title file """ sample2sex = {} with open(args.title_file_path, "rU") as titleFile: tfDict = csv.DictReader(titleFile, delimiter="\t") for row in tfDict: if row[...
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def reverse_key_value(orig_dict): """ DESCRIPTION ----------- Reverse the key value pairs of a dictionary object. PARAMETERS ---------- orig_dict : dict A dictionary object. RETURNS ------- rev_dict : dict A dictionary with the values of the original dictionar...
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import numpy def make_labels(X): """Helper function that generates a single 1D array with labels which are good targets for stock logistic regression. Parameters ========== X : numpy.ndarray The input data matrix. This must be an array with 3 dimensions or an iterable containin...
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