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def _print_behind_ahead(behind, ahead): """ Print Behind Ahead """ numcommits = "" if behind: numcommits += "-" + str(behind) if behind and ahead: numcommits += "/" if ahead: numcommits += "+" + str(ahead) return numcommits
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def precprint(prec_type, prec_cap, p): """ String describing the precision mode on a p-adic ring or field. EXAMPLES:: sage: from sage.rings.padics.misc import precprint sage: precprint('capped-rel', 12, 2) 'with capped relative precision 12' sage: precprint('capped-abs', 11...
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def zooms_string(z1, z2): """Prints 'zoom N' or 'zooms N-M'.""" if z2 != z1: return "zooms {}-{}".format(min(z1, z2), max(z1, z2)) else: return "zoom {}".format(z1)
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def collect(group, p, barrier_token): """ Collect partitions from partd, yield dataframes """ return p.get(group)
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def ret_schema(): """Defines dictionary of schema.""" schema = { ('path to directory', str, 'path'): ('path', str, '/apps/homefs1/.*'), ('dict of stocks', str, 'stocks'): { ('ticker', str, '[A-Z]*', '+'): { ('stock price', str, 'price'): ('price', float), ...
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import os def files_and_folders(dir_path="."): """Return a dict containing a sorted tuple of files and a sorted tuple of folders""" f_and_f = os.listdir(dir_path) folders = [f for f in f_and_f if os.path.isdir(os.path.abspath(f))] files = set(f_and_f) - set(folders) return { "files": t...
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def _imag_2d_func(x, y, func): """Return imag part of a 2d function.""" return func(x, y).imag
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def save_config( bkp_config, config_file, for_restart = False ): """ save the configuration to the file object passed as a parameter """ print("bucket =", bkp_config["bucket"], file=config_file) print("dirs = ", ";".join(bkp_config["dirs"]), file=config_file) print("exclude_files = ", bkp_config["exclud...
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def index(l, val, default=-1): """ find the index the val in list :param l: index list :param val: value to find index :param default: default value to return that value not in list :return: value index in list """ try: getattr(l, 'index') except: raise TypeError('ipn...
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from typing import OrderedDict def dict_order(_dict): """Controls the print order of the dictionary """ new_dict = OrderedDict() new_dict['name'] = _dict.get('name') new_dict['type'] = _dict.get('type') new_dict['conditions'] = _dict.get('conditions') new_dict['scopes'] = _dict.get('scopes...
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def batch_directions(z, y, Q, path_sizes, step_vals, subtract_projection=True): """ This function takes an input batch of z vectors (and corresponding class label vectors y) and applies the directions in Q to the batch of z vectors. :param z: (N, nz) tensor of base random noise to manipulate with direc...
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def update_tax_nodes(nodes, tax): """ nodes can be a list of strings: taxids or names or a list of tuples with (rank, taxid/name) Return a dictionary mapping nodes and updated nodes (or None) First look for id, if nothing found, lookup by unique name """ updated_nodes = {} for node in nodes...
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def value_formating(): """Format a value with the underlying format function.""" happy_value = type('HappyFormater', (object,), { '__format__': lambda _, template: template.replace('lol', '(^_^)')})() return "{:lol}".format(happy_value)
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import json def _CanParseJSON(my_json): """Returns True if the input can be parsed as JSON, False otherwise.""" try: json.loads(my_json) except ValueError: return False return True
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import csv def write_csv(f, items): """ :type items: list[OrderedDict] """ if len(items) == 0: # nothing to write return f fieldnames = items[0].keys() # this works as expected because we use OrderedDicts writer = csv.DictWriter(f, fieldnames) writer.writeheader() f...
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import json def get_brawl_cookie(request): """ Get brawl cookie """ return json.loads(request.cookies.get('brawl') or '[]')
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import torch def label_smoothed_nll_loss( lprobs: torch.Tensor, target: torch.Tensor, epsilon: float, ignore_index=None, reduction="mean", dim=-1 ) -> torch.Tensor: """ Source: https://github.com/pytorch/fairseq/blob/master/fairseq/criterions/label_smoothed_cross_entropy.py :param lprobs: Log-probab...
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def select_latest(engine, ticker, time_x): """ 获取离time_x最近的一个 :param engine: :param ticker: :param time_x: :return: """ sql = 'select price,adj_factor from security_lookup_cn_wave_10 where ticker="{}" and time_x<="{}" ORDER BY time_x desc limit 1'.format( ticker, time_x) rs_s...
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from typing import Union import json def prettify(data: Union[list, dict]) -> str: """ Return input data structure (list or dict) as a prettified JSON-formatted string. Default is set here to stringify values like datetime values. """ return json.dumps(data, indent=4, sort_keys=True, default=str)
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def power_series(z, cs): """ returns cs[0] + cs[1] * z + cs[2] * z ** 2 + ... + cs[-1] * z ** (len(cs) - 1) """ s = cs[-1] for c in reversed(cs[:-1]): s *= z s += c return s
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def normalize(signal): """Restrict the range of a signal to the closed interval [-1.0, 1.0]. """ normalized_signal = signal / max(signal.max(), signal.min(), key=abs) return normalized_signal
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from pathlib import Path import os import hashlib def pseudo_hash(path: Path, string: str = "") -> str: """Compute a pseudo hash based on : - The file size - The file last modification date - A given string (Real hash is too long to compute for big file.) """ string = "-".join([str(os.pat...
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def remove_non_ascii(s): """ Remove non-ascii characters in a file. Needed when support for non-ASCII is not available. Args: s (str): Input string Returns: String with all non-ascii characters removed. """ return "".join(i for i in s if ord(i) < 128)
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def generate_streak_matrix(weeks_data): """ Create the streak matrix 1 if the user committed 0 if the user hasn't committed -1 to store null values :param weeks_data: week-wise contribution data of the user :return: matrix containing the values of the contribution streak """...
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def any_in_seq(search_vals, seq): """Check if any value in search_vals in the sequence seq""" for v in search_vals: if v in seq: return True return False
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def date2season(dt): """converts datetime to season like 2008/2009""" y = dt.year if dt.month <= 6: return "%s/%s" % (y - 1, y) else: return "%s/%s" % (y, y + 1)
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def limit(self, *args, **kwargs): """ Calls :meth:`.Table.limit` on each table in the TableSet. """ return self._proxy('limit', *args, **kwargs)
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import json def get_json_file(path): """ Load a JSON file from disk. """ with open(path) as f: data = json.load(f) return data
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def can_use_slay(user_id): """Return true if the user can use the command "slay" Characters that can slay: - All characters (to allow for fake claiming) """ return True
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def get_emojis(): """Retrieves hundreds of emoji glyphs derived from the UTF-8 character table. Examples: >>> moji = get_emojis()\n >>> moji[1540:1547]\n '🤠 🤡 🤢 🤣' """ emoji_list_1 = [chr(i) for i in range(127744, 127994)] emoji_list_2 = [chr(e) for e in range(128000, 12...
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def Floyd(G): """Returns the length of paths from all nodes to remaining nodes Parameters ---------- G : graph weighted graph Returns ------- result_dict : dict the length of paths from all nodes to remaining nodes Examples -------- Returns the length of p...
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def format_datetime(session): """Convert date or datetime object into formatted string representation. """ if session.data is not None: date_format = session.field.opts.date_format if date_format == 'iso8601': session.data = session.data.isoformat() else: sess...
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def train_step(model, optimizer, loss_fn, conditions, true, out): """One training step Args: model: the feed-forward network optimizer: the optimizer for the network loss_fn: the loss function conditions: the observing conditions used as inputs true: the true galaxy ...
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import torch def get_concentrated_mask(class_weights, topk): """ Returns a logical mask indicating the categories with the top k largest probabilities, as well as the catogories corresponding to those with the top k largest probabilities. Parameters ---------- class_weights : torch.Tensor...
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import os import sys import shutil def main(loc=None, excluded=[], silent=False): """Sorts files into categories. Sorts each file (excluding itself), according to its extension, into folders created for each category. New files are moved, existing files are overwritten. A summary is printed ...
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import re def get_params(rule): """ Returns params from the url Args: rule (str): the endpoint path (e.g. '/v1/data/<int:id>') Returns: (list): parameters from the endpoint path Examples: >>> rule = '/v1/random_resource/<string:path>/<status_type>' >>> get_params(rul...
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import json import os def get_bait_name(input_config: str): """Get the bait name from case config Args: input_config: Path to config Returns: bait: string """ with open(input_config) as f: load_config = json.load(f) # Read the config file and return the bait nam...
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def reset_var(): """reset vars""" return [], [], True
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def upstream_or_distgit_path( request, upstream_and_remote, distgit_and_remote, ogr_distgit_and_remote ): """ Parametrize the test to upstream, downstream [currently skipped] and ogr distgit """ return { "upstream": upstream_and_remote[0], "distgit": distgit_and_remote[0], "o...
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def dotProduct(d1, d2): """ @param dict d1: a feature vector represented by a mapping from a feature (string) to a weight (float). @param dict d2: same as d1 @return float: the dot product between d1 and d2 """ if len(d1) < len(d2): return dotProduct(d2, d1) else: return sum(...
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def input_data(): """Input data (as coming from the view layer).""" return { "metadata": {"title": "Test", "type": {"type": "test"}}, }
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def bitvec_number(x): """Return number represented by given bitve""" return sum(x << (32 * i) for i, x in enumerate(x.data[0:x.size]))
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def garfield_empty_mock(url, request) -> str: """ Mock HTTP empty response using HTTMock :param url: str :param request: Request :return: str """ return """ <html> <body></body> </html> """
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def check_order(order): """ Checks the specified drawing order is valid and returns the corresponding tree traversal order. """ if order is None: order = "minlex" traversal_orders = { "minlex": "minlex_postorder", "tree": "postorder", } if order not in traversal_o...
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def get_total_num_women(dataframe, fil): """Counts total women in category Returns: [list] -- total number of women, total number in category """ total = 0 matched = 0 for index, row in dataframe.iterrows(): if fil(row): total += 1 if row["gender"] == "F"...
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def get_cat2id(item_metas, n_entities): """Extracts all categories from item metada and maps them to an id""" categories = set([cat for it_meta in item_metas for cat in it_meta.categories]) return {cate: n_entities + i for i, cate in enumerate(categories)}
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def add_acids(EP, amino_acids): """ The function check that all alpha amino acids in sequence, else add this monomers. Parameters ---------- EP : dict Variants of peptide sequences. amino_acids : list List of alpha amino acids. Returns ------- EP : dict C...
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def identify_target_ligand(ligand_residues): """Attempts to guess the target ligand""" # If there is only one target ligand then that must be the target # even if there are multiple instances. That could be the case if # the compound is peptidic for example. if len(ligand_residues) == 1: ret...
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def Recherche(tree, word): """Recherche le mot word dans l'arbre tree et indique s'il est dans l'arbre.""" return tree.contains(word)
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def fix_IE_for_attach(request, response): """ This function will prevent Django from serving a Content-Disposition header while expecting the browser to cache it (only when the browser is IE). This leads to IE not allowing the client to download. """ useragent = request.META.get('HTTP_USER_AGENT...
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def to_dict(arr): """ Convert a list to a dict with keys drawn from '0', '1', '2', ... Examples -------- >>> to_dict([2, 3, 4]) # doctest: +SKIP {'0': 2, '1': 3, '2': 4} """ return dict(zip(map(str, range(len(arr))), arr))
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def is_power_of_two(a): """Return whether the argument, cast to int, is a power of 2.""" a = int(a) # Bit manipulations. A power of 2 has a bit represetenation like 0...010...0. # For such a number subtracting 1 from it turns it into 0...001...1, so ANDing # a-1 and a should yield 0. return a > 0 and ((a - ...
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from typing import Callable from functools import reduce def clean(text: str, *cleaners: Callable[[str], str]) -> str: """Cleans the given text using the provided cleaning functions. Arguments: text: The text string to be cleaned. cleaners: The simple cleaner functions...
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def strip_parens(text): """ strips parenthesis from a string (works with nested parentheses) note that this method will leave the extra spaces behind, but this will not affect tokenization :param text: original string :return: text stripped of parenthetical words """ left_parens = [] ...
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def variable_name_to_title( variable_name, latex_flag=True ): """ Translates a variable name into a title suitable for inclusion in Matplotlib title strings. Variable names are assumed to be lowercased as found in IWP datasets and titles may include LaTeX markers for mathematical typesetting. Unkno...
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import builtins import sys def _str_type_to_type_annotations_dict(annotations_dict: dict): """ When getting the annotations, they return as a string representation of the type. However, we need the actual type. This function will take the annotations dict with the string type and turn it to the ty...
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import os def get_editor(): """return the editor command or raise Exception: look in the environment for either EDITOR, GIT_EDITOR or SVN_EDITOR if not found, raise error EDITOR needs to be set in the env """ found = os.environ.get('EDITOR', os.environ.get('GIT...
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def fix_filter_query(filter): """ fix filter query from user Args: filter: filter from users Returns: dict """ if filter: try: filter = { _.split("=")[0]: _.split("=")[1] for _ in list( set( str(filt...
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def rectangle_area(length, width): """ Calculates the area of a rectangle. :param length: The length of the rectangle. :param width: The width of the rectangle. :return: The area of the rectangle. """ return length * width
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def has_level_five(line): """Check if we need to explode""" count = 0 for c in line: if c == '[': count += 1 if count > 4: return True elif c == ']': count -= 1 return False
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def threshold_array(arr, threshold=2e-4): """ Thresholds an array, returning a binary array Parameters --------- arr : NumpyArray Contains the data to threshold Returns --------- NumpyArray Returns arr with binary values, depending of the threshold """ return (ar...
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def __binary_search(arr, f, g): """ Perform the binary search in order to find the minimum feasible value of ``c`` inside ``arr``. :param arr: The array on which to perform the binary search. :param f: Function to be applied to ``g`` and ``arr[mid]`` (``check_th7`` or ``feas``). :param g: A Network...
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def _current_window_for_event(event): """ Return the `Window` for the currently focussed Buffer. """ return event.app.layout.current_window
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import re def clean_xml(xml): """Clean the given XML string of namespace definition, namespace prefixes and syntactical but otherwise meaningless differences. Parameters ---------- xml : str String representation of XML document. Returns ------- str String representat...
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import torch def _make_orthogonal(A): """ Assume that A is a tall matrix. Compute the Q factor s.t. A = QR (A may be complex) and diag(R) is real and non-negative """ X, tau = torch.geqrf(A) Q = torch.linalg.householder_product(X, tau) # The diagonal of X is the diagonal of R (which is always ...
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def weighted_average(gini_or_entropy_left, left_cnt, gini__or_entropy_right, right_cnt): """ calculate weighted average for Gini index or Entropy :param right_cnt: count of total records on the right side of node :param left_cnt: count of total records on left side of node :param gini_or_entropy_le...
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import torch def concat_entities(entities): """ Concat multiple graphs via concatenation of their entities tensors. Parameters ---------- entities: a list of graph tuples. Either [(v,e,c),...] or [(v,e),...] when the graph has no global attribute. Returns v,e,c - concatenated entities...
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def filter_out_installed_pkgs(event_out_pkgs, installed_pkgs): """Do not install those packages that are already installed.""" return {p for p in event_out_pkgs if (p.name, p.modulestream) not in installed_pkgs}
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import os def is_using_wayland() -> bool: """Check if we are running on Wayland DE. Returns [bool] -- {True} if probably Wayland """ return "WAYLAND_DISPLAY" in os.environ
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def truedicts(all): """ Generates a pair of dictionairies containg all true tail and head completions. :param all: A list of 3-tuples containing all known true triples :return: """ heads, tails = {(p, o) : [] for _, p, o in all}, {(s, p) : [] for s, p, _ in all} for s, p, o in all: ...
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import math def RotateXY(x, y, xc=0, yc=0, angle=0, units="DEGREES"): """Rotate an xy cooordinate about a specified origin x,y xy coordinates xc,yc center of rotation angle angle units "DEGREES" (default) or "RADIANS" """ x = x - xc y = y - yc # make angle clockwise (l...
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def _extract_gpcrdb_residue_html(txt): """ Extracts the relevant lines for all residues from a GPCRdb html entry. Parameters ---------- txt : str Content (html) of the website with the GPCRdb entry. Returns ------- residue_html : list A list in which...
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def seq2set(xs) : """ bijection from sequences to sets """ rs=[] s = -1 for x in xs: sx=x+1 s+=sx rs.append(s) return rs
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def simple_tag_without_context_parameter(arg): """Expected simple_tag_without_context_parameter __doc__""" return "Expected result"
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import re def uuid(value: str): """ Validator for Universally unique identifier Example Result: [123e4567-e89b-12d3-a456-426655440000, 6a2f41a3-c54c-fce8-32d2-0324e1c32e22] Detail: https://en.wikipedia.org/wiki/Universally_unique_identifier#Format """ _uuid_pat = r'[0-9a-fA-F]{...
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from typing import Tuple from typing import Dict def field_annotations(typed_dict) -> Tuple[Dict[str, type], Dict[str, type]]: """Return the required and optional fields in the TypedDict.""" return (typed_dict.__annotations__["required_fields"].__annotations__, typed_dict.__annotations__["optional...
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import os def get_config_log_dir(): """ Retrieve logging directory, create it if it doesn't exist. """ log_dir = os.path.expanduser(os.path.join(u'~', u'.mssqlscripter')) if (not os.path.exists(log_dir)): os.makedirs(log_dir) return log_dir
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import sqlite3 def get_member_data(member_id: str, conn: sqlite3.Connection) -> dict: """ Gets email and phone data from database based on passed member. This function uses placeholders in query so it is injection safe. Look up get_member_data_injection for example where it's NOT injection safe. "...
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def node_short_name(node, **kwargs): """ Returns short name of the given node :param node: str :return: str """ return node
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def create_notify_payload(host, nt, usn, location=None, al=None, max_age=None, extra_fields=None): """ Create a NOTIFY packet using the given parameters. Returns a bytes object containing a valid NOTIFY request. The NOTIFY request is different between IETF SSDP and UPnP SSDP. In IETF, the 'location...
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import math def runs(bit_str: str): """Runs Test Determine whether the number of runs of ones and zeros of various lengths is as expected for a random sequence. See section 2.3 in this NIST publication: https://tsapps.nist.gov/publication/get_pdf.cfm?pub_id=906762 """ n = len(bit_str) ...
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import numbers import math import cmath def atan(x): """ Uncertain number arctangent function .. note:: In the complex case there are two branch cuts: One extends from :math:`\mathrm{j}` along the imaginary axis to :math:`\mathrm{j}\infty`, continuous from the right. ...
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import os def cpu_time(reference_cpu_time = 0.0): """ Returns current or elapsed value of CPU time used by the process, including both user and system CPU time of both the process itself and its children. """ return sum(os.times()[:4]) - reference_cpu_time
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def get_present_volume(present): """Calculate volume of the box needed for present.""" volume = 1 for side in present: volume *= side return volume
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def crop_rasters_for_sr(max_sr_factor, *hmaps): """Crop a list of rasters to a size such that they can be evently divided by ``max_sr_factor``. It assumes that each raster is centered identically. I.e. if one raster has size 256x256 and another 254x254, it assumes that it is a border of size 1 that is r...
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def track_score(track_path): """ Scoring the proposal tracklet can b associate 2 st_track possibility. Score = weight_motion * score_motion + weight_appearance * score_appearance :return: """ path_score = 0. for each_node in track_path: path_score += each_node.score return path_s...
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def font_size_norm(x): """the web font size is different from the game client's - try to approximate how it would look without having to know the actual value.""" try: x = int(x) except ValueError: return "100%" ratio = x / 24 return f"{int(ratio * 100)}%"
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def apim_api_operation_get(client, resource_group_name, service_name, api_id, operation_id): """Gets the details of the API Operation specified by its identifier.""" return client.api_operation.get(resource_group_name, service_name, api_id, operation_id)
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def _uses_vulnerable_solc_version(version): """Detect if used compiler version is 0.4.[0|1|2|3|4] Args: version (solc version used) Returns: Bool """ if version in ["0.4.0", "0.4.1", "0.4.2", "0.4.3", "0.4.4"]: return True return False
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import hashlib def get_subscriber_hash(member_email): """ The MD5 hash of the lowercase version of the list member's email. Uses as memeber_id """ member_email = member_email.lower() m = hashlib.md5(member_email) return m.hexdigest()
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def set_ax_info(ax, **kwargs): """Set Axes information Args: ax (Axes) : The ``Axes`` instance. kwargs : ``key`` indicate the method which is start with ``set_``, and the method takes arguments (``val``) according to the type of ``val`` Returns: ax (Axes) : The ``Axes`` instance...
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def Reverse(action): """Reverses the behavior of the action Example:: # rotates the sprite 180 degrees in 2 seconds counter clockwise action = Reverse( RotateBy( 180, 2 ) ) sprite.do( action ) """ return action.__reversed__()
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from datetime import datetime def prune(iterable, start, end): """Discard events that fall outside the start-end interval.""" events = sorted(iterable, key=lambda event: event.created_at) events.reverse() # Check if we have at least one event older than the start date. # If so, then we have a com...
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def get_licenses(obj): """ Returns a list of license under which the given language resource is available. """ result = [] for dist in obj.distributioninfotype_model_set.all(): for licence_info in dist.licenceInfo.all(): result.append(licence_info.licence) return result
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def patches(internal_api_patcher): """ Fixture that resets session-wide patches before each test case function """ for mock in internal_api_patcher.patcher_mocks: mock.reset_mock() return internal_api_patcher
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def get_frame_number(frame): """Get frame number by calculating distance to newest frame.""" num = 0 newer = frame.newer() while newer != None: newer = newer.newer() num += 1 return num
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import torch def batch_l2(kernels): """ Args: kernels: (num_kernels, bsize, bsize) """ n = kernels.shape[0] kernels = kernels.view(n, -1) # (n, bsize*bsize) distances = torch.cdist(kernels, kernels) distances = distances - torch.diag(torch.diag(distances)) return - distances.m...
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def ecs_efs_encryption_status(status): """ Property: EFSVolumeConfiguration.TransitEncryption """ valid_status = ["ENABLED", "DISABLED"] if status not in valid_status: raise ValueError( 'ECS EFS Encryption in transit can only be one of: "%s"' % (", ".join(valid_statu...
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def folder_contents_html(folder_path, files, folders): """Given files and folders generate html.""" html = "<!DOCTYPE html><html><body>{}</body></html>" atag = '<a href="{}">{}</a>' files_and_folders = '' for folder in folders: files_and_folders += '<h4>' + atag.format(folder_path + '/' + fo...
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import os def get_logdir_name(flags): """Generates the name of the log directory from the values of flags Parameters ---------- flags: neural net architecture generated by get_arguments() Outputs ------- the name of the directory to store the training and evaluation results """...
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