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import sqlite3 def connect_to_db(db_name='rpg_db.sqlite3'): """ This is a function that takes in the file name and connect to the DB using sqlite3 :param db_name:takes in the name of the database :return: connect object """ return sqlite3.connect(db_name)
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def tuple_max(left, right): """Returns a tuple containing the max value at each index between two tuples.""" return tuple(max(a, b) for (a, b) in zip(left, right))
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import re import string def tokenize(text): """ Parses a string into a list of semantic units (words) Args: text (str): The string that the function will tokenize. Returns: list: tokens parsed out """ # Removing url's pattern = r"http\S+" tokens = re.sub(pattern, "", t...
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from warnings import warn def mergeReact(message, partial): """ Returns (complete_message, partial). message must be a ReactMsg. partial is the previous partial (returned from last mergeReact invocation). """ if message.get_type() == 0: # partial if partial is None: warn("...
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import random def sample(probas): """ Sample a discrete proba law given as 1D array :param probas: 1D discrete probabilities distribution np.sum(probas) = 1 :return: One sample according probas """ u = random.random() index = 0 acc = probas[index] while acc < u: index += 1 ...
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def romdatas_have_duplicate_addresses(romdatas): """ Check if any of the romdatas have duplicate addresses. Args: romdatas list(RomData): List of romdatas to check. Returns: Bool: Whether or not there were any duplicated addresses. """ duplicates = False addresses = [] ...
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import functools import cProfile import time import pstats def profile(func): """Decorator for profiling the execution of a function.""" @functools.wraps(func) def func_wrapped(*args, **kwargs): """Function which wraps original function with start/stop profiling.""" pr = cProfile.Profile() pr.enable...
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def make_column_kv_fmt(keys, sep=" "): """Return the format function for a key/value pair that lines up all the keys and values. """ maxlen = max(len(k) for k in keys) if keys else 1 return "{{:{:d}s}}{:s}{{!s}}".format(maxlen, sep).format
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import re import string def strip_punc(s, all=False): """ Removes punctuation from a string. :param s: The string. :param all: Remove all punctuation. If False, only removes punctuation from the ends of the string. """ if all: return re.compile('[{0}]'.format(re.escape(string.p...
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def rectify(invec): """Rectify input series so that negative values are zero""" invec[invec <= 0] = 0 return invec
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def eratosthenes_primes(upper_bound): """ Function returns a list of all primes up to a given number. Uses the Sieve of Eratosthenes method for finding primes. :param upper_bound: {int} upper bound :return: {list of ints} is list of primes up to maximum """ # initialize arrays for storage...
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def find_modified_cluster(clusters, added_items): """ Method to find cluster that changed when appending an item :param clusters: List of clusters of chips :param added_items: Item(s) that were added to the board :return: clusters in which added item is found """ changed_clusters = [] fo...
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def selectflagpage(place, results): """Given a list of wikipedia page names, selects one with 'flag' or 'coat of arms' in the title and returns it :param place: The place who's flag is being searched for :type plae: String :param results: A list of search results :type results: [String] :...
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def _has_parameters(Cls): """ A decorator for any class which has parameters which creates an add_parameter method for the class. Args: Cls: The class with parameters Returns: An augmented class version of the original class which has an add_parameter method. """ class Augmente...
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def camel(s): """Convert string to CamelCase.""" return ''.join(x[0].upper() + x[1:].lower() for x in s.split())
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import re def startend_to_pattern(start: str, end: str | None = None) -> str: """Convert a start and end string to capture everything between.""" end = start if end is None else end pattern = r"(?<={start})(\s|\S)*(?={end})".format( start=re.escape(start), end=re.escape(end), ) ret...
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def convert_to_conv_params(centers_data): """Converts input data to convolution compatible format of parameters. :param centers_data: Input data :return: Parameters for convolution layer """ assert len(centers_data.shape) == 2 num_centers = centers_data.shape[0] embedding_size = centers_d...
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import inspect def get_function_description(callable_object): """ Gather information about callable object to string :param callable_object: callable object to analyze :type callable_object: Callable[[], any] :return: str -- object description """ object_class_name = callable_object.__cla...
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import types import inspect def takes_ctx(function: types.FunctionType) -> bool: """Whether or not a function accepts a context argument""" argspec = inspect.getfullargspec(function) return "ctx" in argspec.args or "ctx" in argspec.kwonlyargs
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import getpass def hidden_prompt_func(prompt): """Input hidden text from the user.""" return getpass.getpass(prompt)
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import math def tfIDF(word, word_dict): """Takes a word and the dictionary from the search index query from that word and returns a new word dictionary formatted with TF.IDF scores for each chapter. ---------- Parameters: word (string): the queried word word_dict (dict): the dictionary p...
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from typing import List def _clean_names_refstate(names: List[str]) -> List[str]: """Uniformization of refstate profile names.""" to_clean = { 'Tref': 'T', 'rhoref': 'rho', 'tcond': 'Tcond', } return [to_clean.get(n, n) for n in names]
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def get_measured_by_datatype(data): """ Get unique list of species for each 'source' label in data. Parameters ---------- data : ExperimentalData Returns ------- measured, sig_measured : dict, dict Dictionaries where keys are 'source' and values are sets of ids. """ measu...
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def _Shorten(s, prefixofs, suffixofs, maxlen): """Shorten the given string if its length is >= maxlen. Note: maxlen should generally be considerably bigger than prefixofs + suffixofs. It's disconcerting to a reader when you have a "..." to replace 10 bytes, but it feels fine when the "..." replaces 500 byte...
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import hashlib def hash_file(fpath, block_size=2**16): """ Get the SHA1 hash of a file. Args: fpath (str): Path to file. block_size (int): Number of bytes to read from the file at a time. Returns: str: hash SHA1 digest as a hex string. """ hash_ = hashlib....
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def check_course_sync_agent_type(json): """ Check if the type of the incoming statement is course. :param json: A statement, possibly with type course. :type json: union(dict(str, NoneType), dict(str, dict(str, str))) :return: A boolean, true if the type of the incoming statement is a course, false...
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import hashlib def get_sha1(content: bytes) -> str: """ Return SHA1 hash of bytes """ return hashlib.sha1(content).hexdigest()
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def _predict(theta, features, offsets): """ Function to get the prediction scores :param theta: Model coefficients. :param features: Input feature matrix. :param offsets: Input offsets. :return: Per_coordinate_scores and total_scores. """ per_coordinate_scores = features.dot(theta) t...
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import math def get_magnitude_2D(vector_2D): """ Args: vector_2D (list): eg [0,0] vector Returns: float: The magnitude of the vector. """ return math.sqrt( (vector_2D[0] * vector_2D[0]) + (vector_2D[1] * vector_2D[1]) )
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def callable_or_value(val, msg): """ Return `val(msg)` if value is a callable else `val`. """ if callable(val): name = val(msg) else: name = val return name
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def get_occurrences(node): """ Get occurrences data from metadata if it exists """ occurrences = node.entity_tpl.get("metadata", {}).get("occurrences") if not isinstance(occurrences, list): return {} # Let's give MiCADO a default upper bound of 99 for now... if occurrences[1] == "U...
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def is_even(num): """ Function intended to take an integer as input. Returns True if even and False if odd :param num: the integer to be tested :return: Boolean value representing if the number is even or not """ if int(num) % 2 == 0: return True else: return False
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from typing import Tuple def confidence_to_rgb(confidence: float) -> Tuple[int, int, int]: """ Interpolate between red and green based on confidence parameter <0, 1>. :param confidence: factor for choosing color between red and green :return: Tuple containing BGR code for color """ i...
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def length_genome(chr_length_dict): """Output the length of the genome in bp Parameters ---------- chr_length_dict : dict A dictionary describing the length of each chromosome. Returns ------- int The length of the genome """ chrom_list = ['I', 'II', 'I...
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def massic_rate_sutton(k, conc_evaporating_fluid, wind_speed, pool_area, schmdt_nmbr, r): """ Return the evaporation rate [kg/s m²] of sutton's model source : (Fingas, 2015) Parameters ---------- k : mass transsfert coefficent [1/m²] conc_evaporating_fluid : Concentra...
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def coarse_pos_e(tags): """ Coarse POS tags of Dadegan corpus: N: Noun, V: Verb, ADJ: Adjective, ADV: Adverb, PR: Pronoun, PREP: Preposition, POSTP: Postposition, CONJ: Conjunction, PUNC: Punctuation, ADR: Address Term, IDEN: Title, PART: Particle, POSNUM: Post-noun Modifier, PREM: Pre-modifier, PRENUM: Pre-noun Nu...
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def _clear_address_purpose(address_purpose): """ Converts address_purpose to all uppercase :param address_purpose: The address_purpose API param value :type address_purpose: str :return: Cleaned address_purpose value :rtype: str """ return address_purpose.upper()
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def wrap_optimizer(cls, **default_kwargs): """Wraps an optimizer such that __init__ uses the specified kwargs.""" class WrapperUnrolledOptimizer(cls): def __init__(self, *args, **kwargs): new_kwargs = default_kwargs.copy() new_kwargs.update(kwargs) super(WrapperUnrolledOptimizer, self).__ini...
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def calc_temp(hex_str): """ Convert 4 hex characters (e.g. "040b") to float temp (25.824175824175825) :param hex_str: hex character string :return: float temperature """ adc = int(hex_str[0:2], 16) * 256 + int(hex_str[2:4], 16) temp = (300 * adc / 4095) - 50 return temp
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def _if_unmodified_since_passes(last_modified, if_unmodified_since): """ Test the If-Unmodified-Since comparison as defined in section 3.4 of RFC 7232. """ return last_modified and last_modified <= if_unmodified_since
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def sequential_number_with_identifier_prefix_backend(**kwargs): """ This backed uses moderation request's primary key to a produce readable semi-sequential numbers, prefixed with `workflow.identifier` field, if set """ moderation_request = kwargs["moderation_request"] return "{}{}".format(modera...
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import re def rule_to_regexp(rule): """ returns a tuple (rule_name, rule_regexp) e.g. ("keep", <regexp for matching product names> """ #this part might be moved out and regular expression cached (rule_name, rule_test) = rule.split() # we create a regexp out of rule #we ignore the 4th rule: rule_parts =rule...
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def fixed_monthly_payment(monthly_payment): """ :param monthly_payment: int>=0 :return: fixed monthly payment, which is multiple of 10 """ return monthly_payment * 10
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def get_pos_tagged_from_word( pred_answer, analyzer ): """ Progress morpheme analysis. Args: pred_answer ([str]): predicted answer. analyzer ([type]): part-of-speech tagger(kaiii, mecab, okt, kkma, komoran). Returns: List[Tuple(str)]: the result of pred_answer's morpheme an...
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import math def to_deg_min(DecDegrees): """ Converts from decimal (binary float) degrees to: Degrees, Minutes """ degrees, remainder = divmod(abs(DecDegrees), 1) # float to preserve -0.0 return math.copysign(degrees, DecDegrees), remainder * 60
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from typing import Any def squeeze_tuple(item: Any) -> Any: """Reduces a tuple to a single item if only it consists of a single item. Args: item: any sequence or a single item. Returns: a single item if possible, or an input sequence if not. >>> from redex import util >>> ut...
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import re def remove_html(text)-> str: """ Removes html tags from text. Args: `text`: A string, word/sentence Returns: Text without html tags. """ html = re.compile('<.*?>') text = html.sub('',text) return text
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def find_magic_number_distinct(numbers): """Find magic number in list of distinct numbers :param numbers List of sorted distinct integers :return Index of magic number or -1 """ def magic_number_helper(numbers, min_num, max_num): """Find magic number in list of distinct numbers ...
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import re def clean_street(street): """ The ACRGIS does not like # symbol in the query This function strips everything after the # :param street: :return: """ return re.sub(r'#.*', "", street).strip()
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def _all_outputs_present(context, graph): """ Returns true if all the symbols in the graph's output list are present in context.""" for outp in graph.outputs: try: context[outp] except ValueError: return False return True
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def format_usgs_sw_site_id(stationID): """Add leading zeros to NWIS surface water sites, if they are missing. See https://help.waterdata.usgs.gov/faq/sites/do-station-numbers-have-any-particular-meaning. Zeros are only added to numeric site numbers less than 15 characters in length. """ if not str(s...
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import requests import json def GitHub_post(data, url, *, auth, headers): """ POST the data ``data`` to GitHub. Returns the json response from the server, or raises on error status. """ r = requests.post(url, auth=auth, headers=headers, data=json.dumps(data)) r.raise_for_status() return ...
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def _to_absolute(detection, box): """Convert detection relative to box to absolute coordinates.""" x0, y0, x1, y1, p = detection bx0, by0, *_ = box return x0 + bx0, y0 + by0, x1 + bx0, y1 + by0, p
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def file_size(size): """ Convert file size in bytes to human-readable format. Parameters ---------- size : float File size in bytes. Returns ------- file_size : str File size in a human-readable format. Examples -----...
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import socket import errno def connection_reset(e: Exception) -> bool: """ Return true if an error is a connection reset error. """ # For some reason we get 'error: [Errno 104] Connection reset by peer' where the # English description suggests that errno is 54 (ECONNRESET) while the actual # e...
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def get_json_attr(obj): """ Returns the serialized version of the object if it has to_json() defined """ if hasattr(obj, "to_json"): return getattr(obj, "to_json")() else: return obj
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def append_arguments(params_a, params_b): """ Concatenates two argument strings. """ if len(params_a) == 0: return params_b elif len(params_b) == 0: return params_a else: return params_a + ',' + params_b
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def get_other_segment_name(pair, segment_name): """returns the name of the other segment""" pair_name = pair['pair'][:] pair_name.remove(segment_name) pair_name=pair_name[0] return pair_name
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def _estimate_fgbio_defaults(avg_coverage): """Provide fgbio defaults based on input sequence depth and coverage. For higher depth/duplication we want to use `--min-reads` to allow consensus calling in the duplicates: https://fulcrumgenomics.github.io/fgbio/tools/latest/CallMolecularConsensusReads.htm...
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import struct def unpack_int(data): """Extract an int from 4 bytes, big endian.""" return struct.unpack(">i", data[:4])[0]
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def _ret_event(event): """Noop, just return the positional args that it was invoked with.""" return event
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def inverse(n): """returns the inverse of n""" return 1/n
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def swap_16b(val): """ Swap 16b val :param val: 16b value :return: swapped 16b """ tmp = (val << 8) | (val >> 8) return tmp & 0xFFFF
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def head( relativeUrlBase=False, mainCssFileName="main.css", pageTitle="", extras="", faviconLocation=False, assetsDirectory=False ): """ *Generate an html head element for your webpage* **Key Arguments:** ``relativeUrlBase`` -- relative base url for js, css, image folders ...
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def format_query(query): """ Strips enclosing quotes from queries if present. Example: >>> format_query('"user:foo bar"') 'user:foo bar' """ return query.strip('"')
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import math def deg2rad(deg=1): """convert degrees to radians.""" return math.pi * float(deg)/180.0
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def get_header_names(raw_data_headers, header_index_range): """ This function takes in the raw data column headers and header index list and creates a list with the header names :param raw_data_headers: A list of all the column names from raw data :param header_index_range: A list of indices for a spec...
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import requests def get_webpage_html(url): """Retrieve the HTML located at the given URL.""" r = requests.get(url) if r.status_code != 200: return None else: return r.text
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def intround(f: float) -> int: """Rounds float and converts it to int """ return int(round(f))
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def nick(raw_nick): """ Split nick into constituent parts. Nicks with an ident are in the following format: nick!ident@hostname When they don't have an ident, they have a leading tilde instead: ~nick@hostname """ if '!' in raw_nick: nick, _rest = raw_nick.split('!') ...
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def stripNamespace(nodeName): """Strip all the namespaces from a given name Args: nodeName (str): Node name to strip the namespaces Returns: str: Node name without namespace """ return nodeName.split(":")[-1]
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def get_blob_truth(blob): """Get the truth flag of a blob or blobs. Args: blob (:obj:`np.ndarray`): 1D blob array or 2D array of blobs. Returns: int or :obj:`np.ndarray`: The truth flag of the blob as an int for a single blob or array of truth flags for an array of blobs. ...
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from typing import Iterable from typing import Dict from typing import List def split_images_list_by_dataset(images_to_detect: Iterable[str] ) -> Dict[str, List[str]]: """ Args: images_to_detect: list of str, image paths with the format <dataset-name>/<imag...
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def decode_endian(value_array, is_little_endian=True): """ Return a 16-bit value from two 8-bit values, to the specified endianism. Args: value_array (list): The two 8-bit values to be processed. is_little_endian (bool): Is the final value little endian or not. Default: True. Retu...
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import re def add_indent(text, indent, re_start = re.compile(r'\n(?=.)')): # re.compile(r'(?m)^(?=.)') """ Append `indent` string at the beginning of each line of `text` excluding the 1st line (!). Empty lines (containing zero characters, not even a space) are left untouched! """ if not ind...
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def cleanColumn(column,offset): """Reorients a given column Args: column (list): block of numbers offset (int): integer displacements Returns: list: reoriented column """ split =[[] for i in range(offset)] for i in range(len(column)): split[i%offset].append(col...
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import torch def posterior_mean_error( samples: torch.Tensor, reference_posterior_samples: torch.Tensor, ) -> torch.Tensor: """Return absolute error between posterior means normalized by true std. Args: samples: Approximate samples reference_posterior_samples: Reference posterior sampl...
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import importlib def _load_user_defined_function(function_name: str, module_name: str): """Function to load arbitrary functions Args: function_name (str): name of function to load from function_file module_name (str): file module where function is defined Returns: function loaded f...
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def coords_to_vizier(ra, dec, search_radius): """ Get vizier search url for objects within search_radius of ra, dec coordinates. Include radius from search target, sort by radius from search target. http://vizier.u-strasbg.fr/doc/asu-summary.htx Args: ra (float): right ascension in degrees ...
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def identify_scenario_climate(scen_info, target_run): """Given a run id, return its climate scenario. """ try: c_scen = scen_info[target_run]['climate_scenario'] except KeyError: s_id = "_".join(target_run.split('_')[0:4]) match = {k: v for k, v in scen_info.items() if k.startswi...
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def estimate_hsic(a_matrix, b_matrix, mode='biased'): """ Estimates HSIC (if mode='biased') or pHSIC (if mode='plausible') between variables A and B. :param a_matrix: torch.Tensor, a_matrix_ij = k(a_i,a_j), symmetric :param b_matrix: torch.Tensor, b_matrix_ij = k(b_i,b_j), symmetric, must be the s...
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import logging def load_vocab_dict(vocab_file_path): """Load vocabs, vocab: {"word": 1, ...}""" logging.info("Loading vocab from {}".format(vocab_file_path)) with open(vocab_file_path, encoding='utf-8') as in_f: vocabs = {} for line in in_f: parts = line.rstrip().split("\t") if len(parts) < ...
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def fetch_correct_ID(name, feature_type, cursor): """ Given the name of a transcript or gene, find its TALON ID in the database """ query = """ SELECT ID FROM %s_annotations WHERE attribute = '%s_name' AND value = '%s' """ cursor.execute(query % (feature_typ...
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def _is_oom_error(error: RuntimeError) -> bool: """Check whether a runtime error was caused by insufficient memory.""" message = error.args[0] # CUDA out of memory if 'CUDA out of memory.' in message: return True # CPU out of memory if "[enforce fail at CPUAllocator.cpp:64] . DefaultCP...
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def collapse_hemisphere_index(df): """Returns frame with 'hemisphere' index level removed from index and added as a data column""" updated_frame = df.copy() return updated_frame.reset_index(level='hemisphere', drop=False)
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def _matches_expected_response_header(request_headers, response_headers): """ Returns true if the Content-Type value of the response header matches the Accept value of the request header, false otherwise :param request_headers: the headers for a cosmos request :type request_headers: dict[str, str] ...
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import re def canonize_path(path): """Modify path to a standardized format (e.g. add ./ at the beginning if it's a relative path and it's not there) :return: canonized path """ # add ./ at the begining if relative url if not re.match("^\.?/", path): path = "./" + path return pat...
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def diff_type(diff): """ Determines the type of the diff by looking at the diff flags. """ if diff.renamed: return 'R' if diff.deleted_file: return 'D' if diff.new_file: return 'A' return 'M'
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def get_output_target_folder(ctx, platform_name, configuration_name): """ Determine the output target folder for a platform/configuration combination :param ctx: Context :param platform_name: The platform name to look up :param configuration_name: The configuration name look u...
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from typing import Union def assert_pages(pages: Union[str, int]) -> int: """ Args: pages (str or int): pages need to pull in int or str Returns: int: default 1 """ if isinstance(pages, str) and pages.isdigit(): return int(pages) elif isinstance(pages, int): ...
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from typing import List def rotated_array(A: List[int], x: int) -> int: """We can use a binary search to get the time less than O(n). Instead of looking for a particular element, we are going search for an index `i` such that A[i - 1] > A[i] to find the actual starting index of the array. Once we hav...
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def count_family_size(df): """Return a column containing passenger family size. """ return df['SibSp'] + df['Parch'] + 1
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def editor_enough_edits(editcount: int): """ Check for Editor global editcount criterion. Parameters ---------- editcount : int Returns ------- bool Answer to the question: has the editor made at least 500 edits across all projects? """ # If, for some reason, this inform...
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def merge_dicts(src, dst): """ Merge entries from 'src' into 'dst'. :param src: source dictionary :param dst: destination dictionary """ for k, v in src.items(): if k not in dst: dst[k] = v continue if type(dst[k]) is dict: dst[k] = merge_dic...
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def transform_block(block, scale, translation): """Transform a block by a specified scale and translation. This scales BOTH the width/height as well as the x and y positions, and THEN performs the translation. Args: block: Block object scale: a tuple/list of length two, corresponding to the scale of t...
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def get_events_scheduling_info(events): """ Return a list of events as dictionaries, only with information pertinent to scheduling changes. """ result = [] for e in events: result.append({ "day_num" : e.day_num, "fire_time" : e.fire_time, "fire_time_aux" :...
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from typing import List from typing import Counter def validate_ransom_note( magazine_words: List[str], ransom_note_words: List[str], magazine_words_entered: int, ransom_words_entered: int ) -> str: """ Validate if ransom note can be constructed from the magazine string. :param magazine_w...
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import uuid def _CreateCampaignGroup(client): """Create a campaign group. Args: client: an AdWordsClient instance. Returns: The integer ID of the created campaign group. """ # Get the CampaignGroupService. campaign_group_service = client.GetService('CampaignGroupService', ...
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import re def drop_zeros(v, replace=""): """Drops or replaces trailing zeros and empty decimal separator, if any.""" return re.sub(r"\.?0+$", lambda x: len(x.group()) * replace, str(v))
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import requests def github_issue_labels(issue, githubauth): """Get the labels attached to a GitHub ``issue``.""" url = f"https://api.github.com/repos/zeff.ai/ZeffClient/issues/{issue}/labels" authn = githubauth.authn headers = githubauth.headers resp = requests.get(url, auth=authn, headers=headers...
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