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from typing import Union from typing import List def str_to_list(text: Union[str, None]) -> Union[List, None]: """Split string by comma and return list""" return text.split(",") if isinstance(text, str) else text
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def extract_version(package_name): """ Extracts the version from the package_name. The version is defined as one of the following: -3245s -ab434 -1.1-343s -2.3-4 -134-minimal-24 but not: -ab-13 -ab-ab -m14-m16 The leading "-" is discarded. Example: >>> ...
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def resize_halo_datasets(halos_dset, new_size, write_halo_props_cont, dtype): """ Resizes the halo datasets Parameters ----------- halos_dset: dictionary, required new_size: scalar integer, required write_halo_props_cont: boolean, required Controls if the individual halo properti...
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def bind_ack(data): """ Ensure the data is a bind ack and that the """ # packet type == bind ack (12)? if data[2] != b"\x0c": return False # ack result == acceptance? if data[36:38] != b"\x00\x00": return False return True
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def get_invite_account_id(event): """Return account id for invite account events.""" return event["detail"]["requestParameters"]["target"]["id"]
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import re def _quantity_to_bytes(quantity): """Return a quantity with a unit converted into a number of bytes. Examples: >>> quantity_to_bytes('42Gi') 45097156608 >>> quantity_to_bytes('100M') 100000000 >>> quantity_to_bytes('1024') 1024 Args: quantity (str): a quantity, ...
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from typing import List def get_stuff_class_ids(num_thing_stuff_classes: int, thing_class_ids: List[int], void_label: int) -> List[int]: """Computes stuff_class_ids. The stuff_class_ids are computed from the num_thing_stuff_classes, the thing_class_ids and the vo...
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import math def calc_angle_between_two_locs(lon1_deg, lat1_deg, lon2_deg, lat2_deg): """ This function reads in two coordinates (in degrees) on the surface of a sphere and calculates the angle (in degrees) between them. """ # Import modules ... # Convert to radians ... lon1_rad = math.ra...
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def apply_first(seq): """Call the first item in a sequence with the remaining sequence as positional arguments.""" f, *args = seq return f(*args)
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def path(service): """ Return path — or route pattern — for the given REST service. """ return '/-/{0}'.format(service.lower())
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import re def re_find(s, r, pos=0, endpos=9223372036854775807): """ Returns the match of the first occurrence of the regular expression `r` in string (or byte-sequence) `s`. This is essentially a wrapper for `re.finditer()` to avoid a try-catch StopIteration block. If `r` cannot be found, `None` w...
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def count_object(network, class_ids, scores, bounding_boxes, object_label, threshold=0.75): """ Counts objects of a given type that are predicted by the network. :param network: object detection network :type network: mx.gluon.nn.Block :param class_ids: predicted object class indexes (e.g. 123) ...
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def get_attr_resolver(obj_type, model_attr): """ In order to support field renaming via `ORMField.model_attr`, we need to define resolver functions for each field. :param SQLAlchemyObjectType obj_type: :param str model_attr: the name of the SQLAlchemy attribute :rtype: Callable """ retu...
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def impedance(vp, rho): """ Compute acoustic impedance. """ return vp * rho
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def make_matrix(num_rows, num_columns, entry_fn): """ creates a num_rows * num_columns matrix whose (i,j) entry is an entry_fn """ return [[entry_fn(i, j) for j in range(num_columns)] for i in range(num_rows)]
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def partial_fittable_instance(obj, name=None, **kwargs): """Asserts that obj has a partial_fit, and instantiates it with **kwargs if obj is given as a type""" if name is None: if isinstance(obj, type): name = obj.__name__ else: name = type(obj).__name__ assert hasatt...
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def map_file_to_plot_id(file_path: str, season_id: str, seasons: list) -> str: """Find the plot that is associated with the file Arguments: file_path: the path to the file season_id: the ID of the season associated with the file seasons: the list of seasons Return: Returns th...
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import json def from_json(value): """ Decodes a JSON string into an object. :param str value: String to decode :returns: Decoded JSON object """ return json.loads(value)
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def computechangesetcopies(ctx): """return the copies data for a changeset The copies data are returned as a pair of dictionnary (p1copies, p2copies). Each dictionnary are in the form: `{newname: oldname}` """ p1copies = {} p2copies = {} p1 = ctx.p1() p2 = ctx.p2() narrowmatch = ct...
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def get_id(id_): """Allow specifying old or new style IDs and convert old style to new style IDs Old style: 123-the-slug New style: 123 or the-slug-123 """ if isinstance(id_, int): return id_ elif "-" in id_: front = id_.split("-", 1)[0] if front.isdigit(): ...
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def binomial_coefficient(n, r): """ Find binomial coefficient using pascals triangle. >>> binomial_coefficient(10, 5) 252 """ C = [0 for i in range(r + 1)] # nc0 = 1 C[0] = 1 for i in range(1, n + 1): # to compute current row from previous row. j = min(i, r) ...
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def find_subsequence(iterable, predicate): """ find the subsequence in iterable which predicted return true for example: >>> find_subsequence([1, 10, 2, 3, 5, 8, 9], lambda x: x in [1, 0, 2, 3, 4, 5, 8, 9]) [[1], [2, 3, 5, 8, 9]] >>> find_subsequence([1, 10, 2, 3, 5, 8, 9], lambda x: x not i...
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def fmt_option_key(key, value): """Format a single keyword option.""" if value is None: return "" return f"{key}={value}"
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def get_case_form_ids(couch_case): """Get the set of form ids that touched the given couch case object""" form_ids = set(couch_case.xform_ids) for action in couch_case.actions: if action.xform_id: form_ids.add(action.xform_id) return form_ids
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import re def youtube_url_validator(url): """ ## youtube_url_validator Validates & extracts Youtube video ID from URL. Parameters: url (string): inputs URL. **Returns:** A valid Youtube video string ID. """ youtube_regex = ( r"(?:http:|https:)*?\/\/(?:www\.|)(?:youtube\...
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def is_prime(nb: int) -> bool: """Check if a number is a prime number or not :param nb: the number to check :return: True if prime, False otherwise """ # even numbers are not prime if nb % 2 == 0 and nb > 2: return False # checking all numbers up to the square root of the number ...
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def _is_public(name: str) -> bool: """Return true if the name is not private, i.e. is public. :param name: name of an attribute """ return not name.startswith('_')
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def count_parameters(model, tunable_only: bool = True) -> int: """ Count the number of parameters in the given model. Parameters ---------- model : torch.nn.Module PyTorch model (deep network) tunable_only : bool, optional Count only tunable network parameters References --...
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def transform_optional(node, **kwargs): """Sets the optional flag. """ return "optional"
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import math def sum_digits_factorial(n): """ Compute sum of factorials of each digit in the number n """ sum_fact = 0 while n > 0: sum_fact += math.factorial(n % 10) n //= 10 return sum_fact
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def remove_non_latin(input_string, also_keep=None): """Remove non-Latin characters. `also_keep` should be a list which will add chars (e.g. punctuation) that will not be filtered. """ if also_keep: also_keep += [' '] else: also_keep = [' '] latin_chars = 'ABCDEFGHIJKLMNOPQRST...
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def is_valid_directed_joint_degree(in_degrees, out_degrees, nkk): """ Checks whether the given directed joint degree input is realizable Parameters ---------- in_degrees : list of integers in degree sequence contains the in degrees of nodes. out_degrees : list of integers out degre...
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def get_gb_acc_id(year, case_index): """ Returns global accident id for GB, year and index of accident. GB ids will be in form 2200700000001234 2 at the beginning means it is from Great Britain 2007 means the year 1234 means the case ID as in original data """ try: acc_id = 2000...
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def get_source_url(j): """ return URL for source file for the latest version return "" in errors """ v = j["info"]["version"] rs = j["releases"][v] for r in rs: if r["packagetype"] == "sdist": return r["url"] return ""
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import logging def remediate_iam_policy(sa_iam_policy, sa_resource_name, risky_roles): """Remove risky IAM roles from the service account IAM policy. Args: sa_iam_policy ([dict]): The IAM policy attached to the sa_resource_name. sa_resource_name ([str]): The GCP service account full resource ...
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def create_mapping(dict_times): """ If times are not integers, transform them into integers. :param dict_times: Dict where keys are times. :return: A mapping which is a dictionary maps from current names of time stamps to integers (by their index) """ keys = list(dict_times.keys()) mapping =...
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from typing import Union from typing import Callable import torch def get_activation(fn: Union[Callable, str]): """Get a PyTorch activation function, specified either directly or as a string. This function simplifies allowing users to specify activation functions by name. If a function is provided, it is s...
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def rain(walls): """ walls is a list of non-negative integers. Return: Integer indicating total amount of rainwater retained. Assume that the ends of the list (before index 0 and after index walls[-1]) are not walls, meaning they will not retain water. If the list is empty return 0. """ ...
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def _ensureListOfLists(iterable): """ Given an iterable, make sure it is at least a 2D array (i.e. list of lists): >>> _ensureListOfLists([[1, 2], [3, 4], [5, 6]]) [[1, 2], [3, 4], [5, 6]] >>> _ensureListOfLists([1, 2]) [[1, 2]] >>> _ensureListOfLists(1) [[1]...
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import torch import math def compute_particle_xyz_from_internal(particle_1_xyz, particle_2_xyz, particle_3_xyz, bond, angle, dihedral): """ Compute the Cartesian coordinate of a particle based on i...
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from pathlib import Path def new_name_if_exists(file: Path): """Make a new filename that avoids name collisions. example: filename(xx).ext where xx is incremented until unused filename is created. Args: file (Path): proposed unique filename. Returns: Path...
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import math def calc_overlap(params): """ Function to calculate the number of pixels requires in overlap, based on chunk_size and overlap percentage, if provided in the config file :param params: (dict) Parameters found in the yaml config file. :return: (int) number of pixel required for overlap ...
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def number_of_short_term_peaks(n, t, t_st): """ Estimate the number of peaks in a specified period. Parameters ---------- n : int Number of peaks in analyzed timeseries. t : float Length of time of analyzed timeseries. t_st: float Short-term period for which to estim...
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def onBoard(top, left=0): """Simplifies a lot of logic to tell if the coords are within the board""" return 0 <= top <= 9 and 0 <= left <= 9
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import torch def haschildren(obj): """Check if the object has children Arguments: obj {object} -- the object to check Returns: bool -- True if the object has children """ ommit_type = [torch.nn.parameter.Parameter, torch.Tensor] if type(obj) in ommit_type: return Fals...
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def addon(options): """ This function constructs a command line invocation that needs to be passed for invoking for a sub workflow. Only a certain subset of options are propogated to the sub workflow invocations if passed. """ cmd_line_args = "" if options.recurse_mode: cmd_line_args +=...
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import struct import pickle async def read_and_unserialize_socket_msg(reader): """ Read and unserialize the message bytestream received from ScrubCam. Parameters ---------- reader : asyncio.StreamReader A reader object that provides APIs to read data from the IO stream Return...
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from typing import List def linvectors_list( pitches: List, ) -> List: """Returns the linvectors of a list of MIDI pitches. """ result = [] first_linvector = [pitches[0]] result.append(first_linvector) for pitch in pitches[1:]: next_linvector = [] for element in result[-1...
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import torch def my_l1(x, x_recon): """Calculate l1 loss Parameters ---------- x : torch.cuda.FloatTensor or torch.FloatTensor Input data x_recon : torch.cuda.FloatTensor or torch.FloatTensor Reconstructed input Returns ------- torch.cuda.FloatTensor or torch.FloatTen...
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def time_to_seconds(timestring): """ Transform (D-)HH:MM:SS time format to seconds. Parameters ---------- timestring: str or None Time in format (D-)HH:MM:SS Returns ------- Seconds that correspond to (D-)HH:MM:SS """ if timestring is None: timestring = "00:00:0...
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def read_column_tagged_file(filename: str, tag_col: int = -1): """Reads column tagged (CONLL) style file (tab separated and token per line) tag_col is the column number to use as tag of the token (defualts to the last in line) return format : [ ['token', 'TAG'], ['token', 'TAG2'],... ] """ data ...
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from typing import List from typing import Any from typing import Iterable def as_list(item_or_sequence) -> List[Any]: """Turns an arbitrary sequence or a single item into a list. In case of a single item, the list contains this element as its sole item.""" if isinstance(item_or_sequence, Iterable): ...
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import random def random_class_ids(lower, upper): """ Get two random integers that are not equal. Note: In some cases (such as there being only one sample of a class) there may be an endless loop here. This will only happen on fairly exotic datasets though. May have to address in future. :param lo...
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def vector_subtract(u, v): """returns the difference (vector) of vectors u and v""" return (u[0]-v[0], u[1]-v[1], u[2]-v[2])
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def head_table(rule): """Table name of the head of a rule""" return rule.head.table
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def callMultiF(f,n,cache): """ Try to get n unique results by calling f() multiple times >>> import random >>> random.seed(0) >>> callMultiF(lambda : random.randint(0,10), 9, set()) [9, 8, 4, 2, 5, 3, 6, 10] >>> random.seed(0) >>> callMultiF(lambda : random.randint(0,10), 9, set([8,9,10]...
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def prep_sub_id(sub_id_input): """Processes subscription ID Args: sub_id_input: raw subscription id Returns: Processed subscription id """ if not isinstance(sub_id_input, str): return "" if len(sub_id_input) == 0: return "" return "{" + sub_id_input.strip...
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def read_file(filename: str) -> str: """Reads contents of given file""" with open(filename, "r") as content_file: return content_file.read()
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def blocks_table_m() -> dict[int, int]: """The table is the number of blocks for the correction level M. Returns: dict[int, int]: Dictionary of the form {version: number of blocks} """ table = { 1: 1, 2: 1, 3: 1, 4: 2, 5: 2, 6: 4, 7: 4, 8: 4, 9: 5, 10: 5, 11: 5, 12: 8, 13: 9, 14...
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def validate_move(move, turn, board): """ Determine if the next move is valid for the current player :param move: :param turn: :param board: :return: boolean flag for if the move is valid as well as the current gamestate dictionary """ if turn == 1: piece = 'X' else: ...
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import uuid def generate_dtids(registry: str, number: int) -> list: """ Generate a list of DTIDs. Args: number: The number of generated DTIDs. registry: Base URL of the DTID registry. Returns: List of DTIDs """ dtids = [] for _ in range(number): dtids.append(r...
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def photon_generation(wave_len, energy): """Determine number of photons in a bundle Parameters ---------- wave_len : float Wavelength associated with a particular bundle energy : float Energy in a bundle Returns ------- nphoton : float Number of photons in a...
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import pkg_resources def get_config(package=__name__, externals=None, api_version=None): """Returns a string containing the configuration information for the given ``package`` name. By default, it returns the configuration of this package. This function can be reused by other packages. If these packages have...
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from typing import List def _add_docstring_to_top_level_func(line: str, docstring: str) -> str: """ Add docstring to the top-level function line string. Parameters ---------- line : str Target function line string. e.g., `def sample_func(a: int) -> None:` docstring : str ...
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def format_time_filter(start, stop, field): """Formats a time filter for a given endpoint type. Args: start (str): An ISO date string, e.g. 2020-04-20. stop (str): An ISO date string, e.g. 2021-04-20. field (str): The time field to filter by. """ start_date = start.split('-') ...
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def make_good_url(url=None, addition="/"): """Appends addition to url, ensuring the right number of slashes exist and the path doesn't get clobbered. >>> make_good_url('http://www.server.com/anywhere', 'else') 'http://www.server.com/anywhere/else' >>> make_good_url('http://test.com/', '/somewhere/o...
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def all_true (seq) : """Returns True if all elements of `seq` are true, otherwise returns first non-true element. """ for e in seq : if not e : return e else : return True
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import torch def binary_accuracy(preds, y): """ Returns accuracy per batch, i.e. if you get 8/10 right, this returns 0.8, NOT 8 """ rounded_preds = torch.round(torch.sigmoid(preds)) correct = (rounded_preds == y).float() #convert into float for division acc = correct.sum() / len(correct) ...
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def _generate_spaxel_list(spectrum): """ Generates a list wuth tuples, each one addressing the (x,y) coordinates of a spaxel in a 3-D spectrum cube. Parameters ---------- spectrum : :class:`specutils.spectrum.Spectrum1D` The spectrum that stores the cube in its 'flux' attribute. Re...
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def query_mission(id): """ Build the Query for a single mission """ query = f''' {{ mission(id:"{id}") {{ id name manufacturers description website }} }} ''' return query
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from datetime import datetime def timestamp_ddmmyyyyhhmmss_to_ntp(timestamp_str): """ Converts a timestamp string, in the DD Mon YYYY HH:MM:SS format, to NTP time. :param timestamp_str: a timestamp string in the format DD Mon YYYY HH:MM:SS :return: Time (float64) in seconds from epoch 01-01-1900. ...
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def wgan_d_loss(scores_real, scores_fake): """ Input: - scores_real: Tensor of shape (N,) giving scores for real samples - scores_fake: Tensor of shape (N,) giving scores for fake samples Output: - loss: Tensor of shape (,) giving WGAN discriminator loss """ return scores_fake.mean() - scores_real.mean...
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def _extract_variants(address, variants_str): """Return the variants (if any) represented by the given variants_str. :returns: The variants or else `None` if there are none. :rtype: tuple of tuples (key, value) strings """ def entries(): for entry in variants_str.split(','): key, _, value = entry.p...
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def extended_gcd(a, b): """Find the solution of ax + by = gcd(x, y), returns (x, y, gcd(x, y))""" if b == 0: return 1, 0, a x, y, gcd = extended_gcd(b, a % b) return y, x - (a // b) * y, gcd
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def _slice_datetime_repr_prefix(obj_repr): """Takes a default "datetime", "date", or "timedelta" repr and returns it with the module prefix sliced-off:: >>> _slice_datetime_repr_prefix('datetime.date(2020, 12, 25)') 'date(2020, 12, 25)' """ # The following implementation (using "startsw...
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def is_permutation(a: int, b: int) -> bool: """Returns boolean if a and b are permutations of each other.""" s_a, s_b = str(a), str(b) if set(s_a) != set(s_b): return False if len(s_a) != len(s_b): return False return sorted(list(s_a)) == sorted(list(s_b))
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def comb(N,P): """ Calculates the combinations of the integers [0,N-1] taken P at a time. The output is a list of lists of integers where the inner lists are the different combinations. Each combination is sorted in ascending order. """ def rloop(n,p,combs,comb): if p: fo...
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from datetime import datetime def _parse_publishing_date(string): """ Parses the publishing date string and returns the publishing date as datetime. Input example (without quotes): "Wed, 09 Nov 2016 17:11:56 +0100" """ return datetime.strptime(string,"%a, %d %b %Y %H:%M:%S +0100")
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import textwrap def _dedent_under_first_line(text: str) -> str: """ Apply textwrap.dedent ignoring the first line. """ lines = text.splitlines() other_lines = "\n".join(lines[1:]) if other_lines: return f"{lines[0]}\n{textwrap.dedent(other_lines)}" return text
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from typing import List def erase_overlap_intervals(intervals: List[List[int]]): """ a variant for LeetCode 435 Given a list of intervals, remove minimal intervals to make the rest of the intervals non-overlapping. 注意:剩余列表中允许打乱原列表的顺序。如果要求保持原顺序,则需要在排序前先记录index。 Examples: 1. intervals: [[1, ...
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def get_file_extension(filename: str) -> str: """ Finds the extension of a file given its full name. :param filename: Complete filename. :return: The extension file type of the file. """ return filename.split('.')[-1]
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def collect_solution_pool(m, T, n_hat_prime, a_hat_prime): """ This function collect the result (list of repaired nodes and arcs) for all feasible solutions in the solution pool Parameters ---------- m : gurobi.Model The object containing the solved optimization problem. T : int ...
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def calcPv(r, freq, periods, value): """ Parameters ---------- r: discount rate; the expected rate of return if every coupon payment was invested at a fixed interest rate until the bond matures freq: frequency periods: periods to maturity value: future ...
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def get_data_science_bookmarks(bookmarks): """Function to select the top level data science folder of bookmarks. Returns the first element of bookmarks where 'Data Science' is one of the keys. """ for item in bookmarks: if type(item) is dict: if 'Data Science' in item.keys():...
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import getpass def get_user(prompt=None): """ Prompts the user for his login name, defaulting to the USER environment variable. Returns a string containing the username. May throw an exception if EOF is given by the user. :type prompt: str|None :param prompt: The user prompt or the default o...
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def parse_lookup_table(lookupfile): """Parse the lookup table that contains AB genotypes.""" ab_geno = {} with open(lookupfile, 'r') as l: for line in l: tmp = line.strip().split(',') snp = tmp[0] # add the line to ab_geno ab_geno[snp] = tmp return...
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def to_http_url(list): """convert [hostname, port] to a http url""" str = '' str = "http://%s:%s" % (list[0], list[1]) return str
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def get_instance_ids(instances): """ Returns a list of instance ids extract from the output of get_instances() """ return [i["Instances"][0]["InstanceId"] for i in instances]
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def _Backward3a_T_Ps(P, s): """Backward equation for region 3a, T=f(P,s) Parameters ---------- P : float Pressure [MPa] s : float Specific entropy [kJ/kgK] Returns ------- T : float Temperature [K] References ---------- IAPWS, Revised Supplementary ...
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import re def re_find(txt: str, regexp: str, i: int = 0) -> str: """Utility: search string txt for a regexp and return i-th group (i.e. parenthesis) if match succeds. Default is whole match.""" match = re.search(regexp, txt) if match: return match.group(i) return ''
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def _backslashreplace_backport(ex): """Replace byte sequences that failed to decode with character escapes. Does the same thing as errors="backslashreplace" from Python 3. Python 2 lacks this functionality out of the box, so we need to backport it. Parameters ---------- ex: UnicodeDecodeError...
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import requests import re def collect_metrics(website, pattern=None): """Retrieve metrics (response time, status code) from a given website. Optionally, search for a regex pattern. Then publish to a Kafka topic. Arguments: website (str): URL of website to collect metrics from pattern (st...
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def descale(data, data_max, data_min): """Reverse normalization Args: data (np.array): Normalized data data_max (float): max value before normalization data_min (float): min value before normalization Returns: [np.array]: Reverse-Normalized data """ data_descaled = ...
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def should_skip_build(metadata_tuples): """Takes the output of render_recipe as input and evaluates if this recipe's build should be skipped.""" return all(m[0].skip() for m in metadata_tuples)
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def determine_scaling_factor(money_endowment: int) -> float: """ Compute the scaling factor based on the money amount. :param money_endowment: the endowment of money for the agent :return: the scaling factor """ scaling_factor = 10.0 ** (len(str(money_endowment)) - 1) return scaling_factor
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def fitAlgorithm(classifier, trainingData, trainingTarget): """ Fits a given classifier / pipeline """ #train the model return classifier.fit(trainingData, trainingTarget)
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def wien(t): """The peak wavelength of a blackbody. Input in Kelvins, output in nm""" return 2.9e6 / t
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def makeSafeXML( someString:str ) -> str: """ Replaces special characters in a string to make it for XML. """ return someString.replace('&','&amp;').replace('"','&quot;').replace('<','&lt;').replace('>','&gt;')
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def as_formatted_lines(lines): """ Return a text formatted for use in a Debian control file with proper continuation for multilines. """ if not lines: return '' formatted = [] for line in lines: stripped = line.strip() if stripped: formatted.append(' ' + l...
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def get_obj_in_list(obj_name, obj_list): """ Gets an object out of a list (obj_list) whos name matches obj_name. """ for o in obj_list: if o.name == obj_name: return o print("Unable to find object by the name of %s in list:\n%s" % (obj_name, map(lambda o: o.name, obj_li...
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