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Injected constructor for tracked classes. Call the actual constructor of the object and track the object. Attach to the object before calling the constructor to track the object with the parameters of the most specialized class.
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Calculate Root-mean-square deviation from two sets of vectors V and W. Parameters ---------- V : array (N,D) matrix, where N is points and D is dimension. W : array (N,D) matrix, where N is points and D is dimension. Returns ------- rmsd : float Root-mean-square dev...
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Binarize a channel based on a continuous channel. Parameters ---------- signal = array or list The signal channel. treshold = float The treshold value by which to select the events. If "auto", takes the value between the max and the min. cut = str "higher" or "lower", define...
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Returns a deferred that will fire when the factory has created a protocol that can be used to communicate with a Mongo server. Note that this will not fire until we have connected to a Mongo master, unless slaveOk was specified in the Mongo URI connection options.
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setter Time rate.
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Toggle the value of an 1-bit group address. If the object has a value != 0, it will be set to 0, otherwise to 1
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Retrieves a translation entry for the given id values. :param int context_id: The id-value representing the context instance. :param int translation_id: The id-value representing the translation instance. :return dict: Mapping of properties for the translation entry. :rai...
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Read multiple sj_outs, return dict with keys as sample names and values as sj_out dataframes. Parameters ---------- fns : list of strs of filenames or file handles List of filename of the SJ.out.tab files to read in jxns : set If provided, only keep junctions in this set. defi...
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Restart the indy_pool docker container. Idempotent. Ensures that the indy_pool container is a new running instance.
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Submit a job to BigQuery Direct proxy to the insert() method of the offical BigQuery python client. Able to submit load, link, query, copy, or extract jobs. For more details, see: https://google-api-client-libraries.appspot.com/documentation/bigquery/v2/pyt...
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Insert a new job into whatever queue is currently USEd :param data: Job body :type data: Text (either str which will be encoded as utf-8, or bytes which are already utf-8 :param pri: Priority for the job :type pri: int :param delay: Delay in seconds before the job should be plac...
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If codon table is missing stop codons, then add them.
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A workflow, allowing specification of sub-workflows for nested parallelization. name and parallel are documented under the Step (s) function. workflow -- a list of Step tuples defining the sub-workflow internal -- variables used in the sub-workflow but not exposed to subsequent steps
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Batch request version of get_blocks_overview
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Iterates through the functions and calls them with given the parameters and returns the first non-empty result >>> f = dispatch(lambda: None, lambda: 1) >>> f() 1 :param \*funcs: funcs list of dispatched functions :returns: dispatch functoin
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Inherit interleave status from parent if undefined.
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Make a protobuf RPC request. :type http: :class:`requests.Session` :param http: HTTP object to make requests. :type project: str :param project: The project to connect to. This is usually your project name in the cloud console. :type method: str :param method: The name of ...
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Delete a scope. This will delete a scope if the client has the right to do so. Sufficient permissions to delete a scope are a superuser, a user in the `GG:Configurators` group or a user that is the Scope manager of the scope to be deleted. :param scope: Scope object to be deleted ...
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Returns a fingerprint of the targets resolved from given target specs.
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Builds a file list which has undergone various instrument-specific checks for input to MultiDrizzle, including splitting STIS associations.
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check, if the tile is inside grid and if it is set as walkable
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Write a list of strings to file.
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Return the size of the stream, or -1 if it cannot be determined.
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Load the objc library using ctypes.
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Parse an ACS Geoid or a GVID to a GVID
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Post some text to a Gist, and return the URL.
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Extracts the headers, using the first value in the dict as the template
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Block and wait for max given time before the UI element appears. Args: timeout: maximum waiting time in seconds Returns: :py:class:`UIObjectProxy <poco.proxy.UIObjectProxy>`: self
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A list containing Points A and B.
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Returns a bitmask of the supported target interfaces. Args: self (JLink): the ``JLink`` instance Returns: Bitfield specifying which target interfaces are supported.
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Displays debug messages to stderr only if the Python interpreter was invoked with the -O flag.
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Does `expr` contain a reduction? Parameters ---------- expr : ibis.expr.types.Expr An ibis expression Returns ------- truth_value : bool Whether or not there's at least one reduction in `expr` Notes ----- The ``isinstance(op, ops.TableNode)`` check in this function...
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Will reset state of each augmentor
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Return an appropriate ``HttpResponse`` on authentication failure. In case of an error, the specification only details the inclusion of the ``WWW-Authenticate`` header. Additionally, when allowed by the specification, we respond with error details formatted in JSON in the body of the response. For more ...
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Generates a list of lines that the passed node covers, relative to the marked lines list - i.e. start of function is line 0.
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Renders a template from the engine plugin or the search plugin If the template is available in the engine plugin, it's taken from there, otherwise the template from this plugin is used. :param template_name: name of the template :param context: the variables that should be available in the ...
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Starts the alerter thread
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Combined read throughput of table and global indexes
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Bottom transformation for video.
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Write a ping ``frame``.
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Computes the range along a particular dimension.
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Convert tile coordinates into pixel coordinates
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List playlists for a for given player id.
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Get the hash of an open file- like object. Parameters --------- file_obj: file like object hash_function: function to use to hash data Returns --------- hashed: str, hex version of result
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Return the path to a template with the given name. Arguments: template_name: the name of the template. search_dirs: the list of directories in which to search.
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Returns a dictionary, accepts a dictionary or a path to a JSON file.
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General function to add an attribute element to a resource element.
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Find first occurrence of 'line' in file. This searches each line as a whole, if you want to see if a substring is in a line, use .grep() or .egrep() If found, return the line; this makes it easier to chain methods. :param line: String; whole line to find. :return: String or False.
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Unsubscribe this participant from all topic to which it is subscribed.
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Return a corpus given an ID. If the corpus ID cannot be found, an InvalidCorpusError is raised. Parameters ---------- corpus_id : str The ID of the corpus to return. Returns ------- Corpus The corpus with the given ID.
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J'.G
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Return all purviews which are irreducible for the mechanism. Args: cm (np.ndarray): An |N x N| connectivity matrix. direction (Direction): |CAUSE| or |EFFECT|. purviews (list[tuple[int]]): The purviews to check. mechanism (tuple[int]): The mechanism in question. Returns: ...
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Get the list of all namespaces Reply all existing namespaces Reply 502 if we can't reach the server for whatever reason
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Evaluate a mako template by resource path, applying the provided context
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Returns the temperature in the specified unit :param int unit: the unit of the temperature requested :returns: the temperature in the given unit :rtype: float :raises UnsupportedUnitError: if the unit is not supported :raises NoSensorFoundError: if the sens...
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Return the earliest among the schema-compliant dates. This is a convenience wrapper around :ref:`PartialDate`, which should be used instead if more features are needed. Args: dates(list): List of dates from which oldest/earliest one will be returned full_date(bool): Adds month and/or day a...
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If form valid return response with action
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Callback that is called when a transition has ended. :param is_on: The on-off state to transition to. :param transition: The transition that has ended.
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r'''Returns the surface area of a cylinder with multiple holes. Calculation will naively return a negative value or other impossible result if the number of cylinders added is physically impossible. Holes may be of different shapes, but must be perpendicular to the axis of the cylinder. .. math:: ...
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Gets repos in url :param url: Url :return: List of repositories in given url
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Read `count` 32-bit ints using the plain encoding.
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Return the disagreement measurement of the given number of votes. It uses the vote vote to measure the disagreement. Parameters ---------- votes : list of int, shape==(n_samples, n_students) The predictions that each student gives to each sample. Returns ---...
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Resume a server
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Return the contents and metadata of a given table. Args: table_name(str): Name of the table. meta_file(str): Path to the meta.json file. meta(dict): Contents of meta.json. Returns: tuple(pandas.DataFrame, dict)
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Inserts a the specified readGroupSet into this repository.
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Delete a member configuration on the NVE interface.
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connect and return a connection instance from url arguments: - url (str): xbahn connection url
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Returns a list of lines from a input markdown file.
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This configures the hostnames stored in the config.
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Save lexicon in Numpy array format. Lexicon will be specific to Sockeye model. :param path: Path to Numpy array output file.
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Setup cache tables.
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This is the master method that cleans all of the filth out of the dirty dirty ``text``. All keyword arguments to this function are passed through to the ``Filth.replace_with`` method to fine-tune how the ``Filth`` is cleaned.
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Build an instance of RecordingInstance :param dict payload: Payload response from the API :returns: twilio.rest.api.v2010.account.call.recording.RecordingInstance :rtype: twilio.rest.api.v2010.account.call.recording.RecordingInstance
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given N matrices, return N determinants
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any function that does not exist will be added as a dummy function that will gather inputs for easing into the possible future implementation
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Gets a list of all regions. :return: A list of all regions. Results have regionID and regionName. :rtype: list
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Helper to include in your own templatetag, for static TemplateHooks Example:: import myhooks from hooks.templatetags import template_hook_collect @register.simple_tag(takes_context=True) def hook(context, name, *args, **kwargs): return template_hook_collect(myhooks, na...
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Computes the Pmf of the sum of values drawn from self and other. other: another Pmf returns: new Pmf
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Validator of inputs.
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Add series to DataFrame in specified column. If series is a numpy-array (not a Series/TimeSeries), it must be the same length as the DataFrames index or an error will be thrown. Series/TimeSeries will be conformed to the DataFrames index to ensure homogeneity.
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Remove a user
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Return the dotted module path of `exc_type`, including the class name. e.g.:: >>> get_module_path(MethodNotFound) >>> "nameko.exceptions.MethodNotFound"
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All paths above you
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Return interpolated Delta T values for the times in `tt`. The 2xN table should provide TT values as element 0 and corresponding Delta T values for element 1. For times outside the range of the table, a long-term formula is used instead.
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DEACTIVATE AA PDP CONTEXT REQUEST Section 9.5.13
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Parse list of key=value strings into a dict
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Abort a multipart upload. :param multipart: A :class:`invenio_files_rest.models.MultipartObject` instance. :returns: A Flask response.
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Ensure that the checksum matches.
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Creates a new metadata cache instance appropriate for this platform.
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Submit an existing bundle to the service
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Finds a peer by URL and return the first peer record with that URL.
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A fiddlin' little function that has an 'import SCons.Environment' which can't be moved to the top level without creating an import loop. Since this import creates a local variable named 'SCons', it blocks access to the global variable, so we move it here to prevent complaints about local variables bein...
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Convert a HEALPix 'ring' index to a HEALPix 'nested' index Parameters ---------- ring_index : int or `~numpy.ndarray` Healpix index using the 'ring' ordering nside : int or `~numpy.ndarray` Number of pixels along the side of each of the 12 top-level HEALPix tiles Returns ------...
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Convert an rgb value to a terminal code.
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Compute the cross product of two 3-dimensional vectors and the derivative of this cross product. http://naif.jpl.nasa.gov/pub/naif/toolkit_docs/C/cspice/dvcrss_c.html :param s1: Left hand state for cross product and derivative. :type s1: 6-Element Array of floats :param s2: Right hand state for cr...
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Indicate if arguments passed to this function are equivalent. .. hint:: This checker operates recursively on the members contained within iterables and :class:`dict <python:dict>` objects. .. caution:: If you only pass one argument to this checker - even if it is an iterable - the ch...
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Perform various data checks to ensure that the list of slices form a evenly-spaced grid of data. Some of these checks are probably not required if the data follows the DICOM specification, however it seems pertinent to check anyway.
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Get a reference of the state_machine the state belongs to :rtype rafcon.core.state_machine.StateMachine :return: respective state machine
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Checks whether or not each observation with a restricted choice set chose an alternative that was personally available to him or her. Will raise a helpful ValueError if this is not the case. Parameters ---------- obs_id_col : str. Denotes the column in `wide_data` that contains the observat...
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Wrap `msg` in bars to create a header effect