rem stringlengths 1 226k | add stringlengths 0 227k | context stringlengths 6 326k | meta stringlengths 143 403 | input_ids listlengths 256 256 | attention_mask listlengths 256 256 | labels listlengths 128 128 |
|---|---|---|---|---|---|---|
public static Method findPrototypeMethod(InvokeInstruction inv, ConstantPoolGen cpg) | public static JavaClassAndMethod findPrototypeMethod(InvokeInstruction inv, ConstantPoolGen cpg) | public static Method findPrototypeMethod(InvokeInstruction inv, ConstantPoolGen cpg) throws ClassNotFoundException { Method m = null; if (DEBUG_METHOD_LOOKUP) { System.out.println("Find prototype method for " + SignatureConverter.convertMethodSignature(inv,cpg)); } short opcode = inv.getOpcode(); // Find the method if (opcode == Constants.INVOKESPECIAL) { // Non-virtual dispatch m = findExactMethod(inv, cpg, INSTANCE_METHOD); } else { String className = inv.getClassName(cpg); String methodName = inv.getName(cpg); String methodSig = inv.getSignature(cpg); if (DEBUG_METHOD_LOOKUP) { System.out.println("[Class name is " + className + "]"); System.out.println("[Method name is " + methodName + "]"); System.out.println("[Method signature is " + methodSig + "]"); } if (opcode == Constants.INVOKEVIRTUAL || opcode == Constants.INVOKESTATIC) { if (DEBUG_METHOD_LOOKUP) { System.out.println("[invokevirtual or invokestatic]"); } // Dispatch where the class hierarchy is searched // Check superclasses MethodChooser methodChooser = (opcode == Constants.INVOKESTATIC) ? STATIC_METHOD : INSTANCE_METHOD; m = findMethod(Repository.lookupClass(className), methodName, methodSig, methodChooser); if (m == null) { if (DEBUG_METHOD_LOOKUP) { System.out.println("[not in class, checking superclasses...]"); } JavaClass[] superClassList = Repository.getSuperClasses(className); m = findMethod(superClassList, methodName, methodSig, methodChooser); } } else { // Check superinterfaces m = findMethod(Repository.lookupClass(className), methodName, methodSig, INSTANCE_METHOD); if (m == null) { JavaClass[] interfaceList = Repository.getInterfaces(className); m = findMethod(interfaceList, methodName, methodSig, INSTANCE_METHOD); } } } return m; } | 7352 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7352/54eb4a3c2d9263ca3e96cc4b620f9b878e3d98bd/Hierarchy.java/buggy/findbugs/src/java/edu/umd/cs/findbugs/ba/Hierarchy.java | [
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((CDirectorySourceLocation)element).getAssociation().toOSString() : ""; | ((CDirectorySourceLocation)element).getAssociation().toOSString() : ""; | public Object getValue( Object element, String property ) { if ( element instanceof CDirectorySourceLocation && property.equals( CP_ASSOCIATION ) ) { return ( ((CDirectorySourceLocation)element).getAssociation() != null ) ? ((CDirectorySourceLocation)element).getAssociation().toOSString() : ""; } if ( element instanceof CDirectorySourceLocation && property.equals( CP_SEARCH_SUBFOLDERS ) ) { return ( ((CDirectorySourceLocation)element).searchSubfolders() ) ? new Integer( 0 ) : new Integer( 1 ); } return null; } | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/8cf78bf7d7d58a8ef513ca5ca4ad2bc990bb8665/SourceListDialogField.java/buggy/debug/org.eclipse.cdt.debug.ui/src/org/eclipse/cdt/debug/ui/sourcelookup/SourceListDialogField.java | [
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markLabel(beyond); | cfw.markLabel(beyond); | private void visitCall(Node node, int type, Node child) { /* * Generate code for call. */ Node chelsea = child; // remember the first child for later OptFunctionNode target = (OptFunctionNode)node.getProp(Node.DIRECTCALL_PROP); if (target != null) { generateCodeFromNode(child, node); int regularCall = acquireLabel(); int directTargetIndex = target.getDirectTargetIndex(); addByteCode(ByteCode.ALOAD_0); classFile.add(ByteCode.GETFIELD, generatedClassName, MAIN_SCRIPT_FIELD, mainCodegen.generatedClassSignature); classFile.add(ByteCode.GETFIELD, mainCodegen.generatedClassName, getDirectTargetFieldName(directTargetIndex), classNameToSignature(target.getClassName())); short stackHeight = classFile.getStackTop(); addByteCode(ByteCode.DUP2); addByteCode(ByteCode.IF_ACMPNE, regularCall); addByteCode(ByteCode.SWAP); addByteCode(ByteCode.POP); if (!itsUseDynamicScope) { addByteCode(ByteCode.DUP); classFile.addInvoke(ByteCode.INVOKEINTERFACE, "org/mozilla/javascript/Scriptable", "getParentScope", "()Lorg/mozilla/javascript/Scriptable;"); } else { aload(variableObjectLocal); } aload(contextLocal); addByteCode(ByteCode.SWAP); if (type == Token.NEW) addByteCode(ByteCode.ACONST_NULL); else { child = child.getNext(); generateCodeFromNode(child, node); }/* Remember that directCall parameters are paired in 1 aReg and 1 dReg If the argument is an incoming arg, just pass the orginal pair thru. Else, if the argument is known to be typed 'Number', pass Void.TYPE in the aReg and the number is the dReg Else pass the JS object in the aReg and 0.0 in the dReg.*/ child = child.getNext(); while (child != null) { boolean handled = false; if ((child.getType() == Token.GETVAR) && inDirectCallFunction) { OptLocalVariable lVar = (OptLocalVariable)(child.getProp(Node.VARIABLE_PROP)); if (lVar != null && lVar.isParameter()) { handled = true; aload(lVar.getJRegister()); dload((short)(lVar.getJRegister() + 1)); } } if (!handled) { int childNumberFlag = child.getIntProp(Node.ISNUMBER_PROP, -1); if (childNumberFlag == Node.BOTH) { classFile.add(ByteCode.GETSTATIC, "java/lang/Void", "TYPE", "Ljava/lang/Class;"); generateCodeFromNode(child, node); } else { generateCodeFromNode(child, node); push(0.0); } } resetTargets(child); child = child.getNext(); } classFile.add(ByteCode.GETSTATIC, "org/mozilla/javascript/ScriptRuntime", "emptyArgs", "[Ljava/lang/Object;"); addVirtualInvoke(target.getClassName(), (type == Token.NEW) ? "constructDirect" : "callDirect", target.getDirectCallMethodSignature()); int beyond = acquireLabel(); addByteCode(ByteCode.GOTO, beyond); markLabel(regularCall, stackHeight); addByteCode(ByteCode.POP); visitRegularCall(node, type, chelsea, true); markLabel(beyond); } else { visitRegularCall(node, type, chelsea, false); } } | 47609 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47609/bd2594e6ebd6d8099b587934641c8f7650d87761/Codegen.java/clean/js/rhino/src/org/mozilla/javascript/optimizer/Codegen.java | [
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print("Got " + a + " accounts (" + r + " automatically registered)."); | print("Got " + a + " accounts."); | public Gui() { initComponents(); try { accfile = System.getProperty("user.home", ".") + "/phonebook.xml"; client = new XmlRpcClientLite(InetAddress.getByName(Utils.COREHOST) .getHostName(), Utils.COREPORT); //XmlRpc.setDebug(true); server = new WebServer(Utils.GUIPORT, InetAddress .getByName(Utils.GUIHOST)); GuiStub guiStub = new GuiStub(this); server.start(); server.addHandler("gui", guiStub); // call REGISTER_GUI immediately after GUI has been opened params.clear(); params.addElement(Utils.GUIHOST); params.addElement(new Integer(Utils.GUIPORT)); Object o = execute("core.registerGui", params, 3000); if (o == null) { // --- something } else if (((String) o).equalsIgnoreCase("OK")) { print("GUI registered."); params.clear(); o = execute("core.accountGetAll", params); int a = 0; int r = 0; if (o != null && o instanceof Vector) { Vector v = (Vector) o; Enumeration e = v.elements(); while (e.hasMoreElements()) { Integer n = (Integer) e.nextElement(); ImageIcon img = new ImageIcon(cl .getResource("gui/resources/red.gif")); img.setDescription(n.toString()); list1.addElement(img); // list1.addElement("#" + n.toString() // + ": not registered"); Account acc = new Account(n.intValue(), false); accounts.add(acc); a++; params.clear(); params.add(n); params.add("autoregister"); String s = (String) execute("core.accountGet", params); if (s.equalsIgnoreCase("1")) { params.clear(); params.add(n); execute("core.register", params); r++; } } print("Got " + a + " accounts (" + r + " automatically registered)."); } } else { print("ERROR: GUI not registered."); } readPhonebook(); Enumeration e = phonebook.elements(); while (e.hasMoreElements()) { Contact con = (Contact) e.nextElement(); list3.addElement(con.name); } } catch (MalformedURLException e1) { e1.printStackTrace(); } catch (UnknownHostException e1) { e1.printStackTrace(); } } | 14260 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14260/b15bc9d650f9d97a34c4d9629336597aea45672e/Gui.java/buggy/trunk/gui/src/gui/Gui.java | [
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textItemHandle.setContentType( DesignChoiceConstants.TEXT_CONTENT_TYPE_HTML ); | textItemHandle .setContentType( DesignChoiceConstants.TEXT_CONTENT_TYPE_HTML ); | public boolean preHandleMouseUp( ) { String type = (String) getRequest( ).getNewObjectType( ); String text = null; ModuleHandle reportHandle = SessionHandleAdapter.getInstance( ) .getReportDesignHandle( ); // TextItemHandle textItemHandle = SessionHandleAdapter.getInstance( // ) // .getReportDesignHandle( ) // .getElementFactory( ) // .newTextItem( null ); TextItemHandle textItemHandle = DesignElementFactory.getInstance( ) .newTextItem( null ); try { if ( IReportElementConstants.AUTOTEXT_PAGE.equalsIgnoreCase( type ) ) { text = AUTOTEXT_LABEL_PAGE + "<value-of>GlobalBirt.CurrentPage</value-of>"; //$NON-NLS-1$ } else if ( IReportElementConstants.AUTOTEXT_DATE.equalsIgnoreCase( type ) ) { text = "<value-of>new Date()</value-of>"; //$NON-NLS-1$ textItemHandle.setContentType( DesignChoiceConstants.TEXT_CONTENT_TYPE_HTML ); } else if ( IReportElementConstants.AUTOTEXT_CREATEDON.equalsIgnoreCase( type ) ) { text = AUTOTEXT_LABEL_CREATE_ON + "<value-of>new Date()</value-of>"; //$NON-NLS-1$ textItemHandle.setContentType( DesignChoiceConstants.TEXT_CONTENT_TYPE_HTML ); } else if ( IReportElementConstants.AUTOTEXT_CREATEDBY.equalsIgnoreCase( type ) ) { text = AUTOTEXT_LABEL_CREATE_BY; String author = reportHandle.getAuthor( ); if ( author != null ) { text += author; } else { String pluginVersion = (String) ReportPlugin.getDefault( ) .getBundle( ) .getHeaders( ) .get( org.osgi.framework.Constants.BUNDLE_VERSION ); text += DEFAULT_AUTHOR + " " //$NON-NLS-1$ + pluginVersion; } } else if ( IReportElementConstants.AUTOTEXT_FILENAME.equalsIgnoreCase( type ) ) { text = AUTOTEXT_LABEL_FILENAME + reportHandle.getFileName( ); } else if ( IReportElementConstants.AUTOTEXT_LASTPRINTED.equalsIgnoreCase( type ) ) { text = AUTOTEXT_LABEL_LAST_PRINTED + "<value-of>new Date()</value-of>"; //$NON-NLS-1$ textItemHandle.setContentType( DesignChoiceConstants.TEXT_CONTENT_TYPE_HTML ); } else if ( IReportElementConstants.AUTOTEXT_PAGEXOFY.equalsIgnoreCase( type ) ) { text = AUTOTEXT_LABEL_PAGE_X_OF_Y; } else if ( !IReportElementConstants.REPORT_ELEMENT_TEXT.equalsIgnoreCase( type ) ) { return false; } if ( text != null ) { textItemHandle.setContent( text ); } } catch ( SemanticException e ) { ExceptionHandler.handle( e ); } setModel( textItemHandle ); return super.preHandleMouseUp( ); } /* | 5230 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5230/4f0c26ca98ecbb792f2b5f93329f788413e6ba1a/BasePaletteFactory.java/buggy/UI/org.eclipse.birt.report.designer.ui/src/org/eclipse/birt/report/designer/internal/ui/palette/BasePaletteFactory.java | [
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configFilePath = args[0]; | Settings.setConfigFilePath(args[0]); | public static void main(String[] args) { String configFilePath = System.getProperty("user.home") + "/.davmail.properties"; if (args.length >= 1) { configFilePath = args[0]; } Settings.setConfigFilePath(configFilePath); Settings.load(); DavGatewayTray.init(); start(); } | 53722 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53722/505f93bf1c428069c2041e98918780100826e0cf/DavGateway.java/buggy/src/java/davmail/DavGateway.java | [
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public org.quickfix.field.SecurityID getSecurityID() throws FieldNotFound { org.quickfix.field.SecurityID value = new org.quickfix.field.SecurityID(); | public quickfix.field.SecurityID getSecurityID() throws FieldNotFound { quickfix.field.SecurityID value = new quickfix.field.SecurityID(); | public org.quickfix.field.SecurityID getSecurityID() throws FieldNotFound { org.quickfix.field.SecurityID value = new org.quickfix.field.SecurityID(); getField(value); return value; } | 8803 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8803/fecc27f98261270772ff182a1d4dfd94b5daa73d/Email.java/clean/src/java/src/quickfix/fix42/Email.java | [
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public User getUser(String username) throws UserNotFoundException { if (username == null) { throw new UserNotFoundException("Username with null value is not valid."); } username = NodePrep.prep(username); User user = (User)userCache.get(username); if (user == null) { user = loadUser(username); } else { user = (User)userCache.get(username); } if (user == null) { throw new UserNotFoundException(); } return user; } | 51636 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51636/404616e01d15188efcb96550a8a684aefe038698/UserManagerImpl.java/clean/src/java/org/jivesoftware/messenger/user/spi/UserManagerImpl.java | [
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System.exit(0); } | System.exit(0); } | public void windowClosing(WindowEvent e) { System.exit(0); } | 13991 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13991/b0fa2f56cd2dcc90452b768e6b38187cfb8c30eb/AddressBook.java/clean/grendel/addressbook/AddressBook.java | [
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dumpElement (name + "; UID="); | public final Object readObject () throws ClassNotFoundException, IOException { if (this.useSubclassMethod) return readObjectOverride (); boolean was_deserializing; Object ret_val; was_deserializing = this.isDeserializing; if (! was_deserializing) setBlockDataMode (false); this.isDeserializing = true;// DEBUG ("MARKER "); byte marker = this.realInputStream.readByte (); switch (marker) { case TC_BLOCKDATA: case TC_BLOCKDATALONG: readNextBlock (marker); throw new BlockDataException (this.blockDataBytes); case TC_NULL: ret_val = null; break; case TC_REFERENCE: {// DEBUG ("REFERENCE "); Integer oid = new Integer (this.realInputStream.readInt ()); ret_val = ((ObjectIdentityWrapper) this.objectLookupTable.get (oid)).object; break; } case TC_CLASS: { ObjectStreamClass osc = (ObjectStreamClass)readObject (); Class clazz = osc.forClass (); assignNewHandle (clazz); ret_val = clazz; break; } case TC_CLASSDESC: {// DEBUG ("CLASSDESC NAME "); String name = this.realInputStream.readUTF ();// DEBUG ("UID "); long uid = this.realInputStream.readLong ();// DEBUG ("FLAGS "); byte flags = this.realInputStream.readByte ();// DEBUG ("FIELD COUNT "); short field_count = this.realInputStream.readShort (); ObjectStreamField[] fields = new ObjectStreamField[field_count]; ObjectStreamClass osc = new ObjectStreamClass (name, uid, flags, fields); assignNewHandle (osc); for (int i=0; i < field_count; i++) {// DEBUG ("TYPE CODE "); char type_code = (char)this.realInputStream.readByte ();// DEBUG ("FIELD NAME "); String field_name = this.realInputStream.readUTF (); String class_name; if (type_code == 'L' || type_code == '[') class_name = (String)readObject (); else class_name = String.valueOf (type_code); fields[i] = new ObjectStreamField (field_name, TypeSignature.getClassForEncoding (class_name)); } setBlockDataMode (true); osc.setClass (resolveClass (osc)); setBlockDataMode (false);// DEBUG ("ENDBLOCKDATA "); if (this.realInputStream.readByte () != TC_ENDBLOCKDATA) throw new IOException ("Data annotated to class was not consumed."); osc.setSuperclass ((ObjectStreamClass)readObject ()); ret_val = osc; break; } case TC_STRING: {// DEBUG ("STRING "); String s = this.realInputStream.readUTF (); ret_val = processResolution (s, assignNewHandle (s)); break; } case TC_ARRAY: { ObjectStreamClass osc = (ObjectStreamClass)readObject (); Class componenetType = osc.forClass ().getComponentType ();// DEBUG ("ARRAY LENGTH "); int length = this.realInputStream.readInt (); Object array = Array.newInstance (componenetType, length); int handle = assignNewHandle (array); readArrayElements (array, componenetType); ret_val = processResolution (array, handle); break; } case TC_OBJECT: { ObjectStreamClass osc = (ObjectStreamClass)readObject (); Class clazz = osc.forClass (); if (!Serializable.class.isAssignableFrom (clazz)) throw new NotSerializableException (clazz + " is not Serializable, and thus cannot be deserialized."); if (Externalizable.class.isAssignableFrom (clazz)) { Externalizable obj = null; try { obj = (Externalizable)clazz.newInstance (); } catch (InstantiationException e) { throw new ClassNotFoundException ("Instance of " + clazz + " could not be created"); } catch (IllegalAccessException e) { throw new ClassNotFoundException ("Instance of " + clazz + " could not be created because class or zero-argument constructor is not accessible"); } catch (NoSuchMethodError e) { throw new ClassNotFoundException ("Instance of " + clazz + " could not be created because zero-argument constructor is not defined"); } int handle = assignNewHandle (obj); boolean read_from_blocks = ((osc.getFlags () & SC_BLOCK_DATA) != 0); if (read_from_blocks) setBlockDataMode (true); obj.readExternal (this); if (read_from_blocks) setBlockDataMode (false); ret_val = processResolution (obj, handle); break; } // end if (Externalizable.class.isAssignableFrom (clazz)) // find the first non-serializable, non-abstract // class in clazz's inheritance hierarchy Class first_nonserial = clazz.getSuperclass (); while (Serializable.class.isAssignableFrom (first_nonserial) || Modifier.isAbstract (first_nonserial.getModifiers ())) first_nonserial = first_nonserial.getSuperclass ();// DEBUGln ("Using " + first_nonserial// + " as starting point for constructing " + clazz); Object obj = null; obj = newObject (clazz, first_nonserial); if (obj == null) throw new ClassNotFoundException ("Instance of " + clazz + " could not be created"); int handle = assignNewHandle (obj); this.currentObject = obj; ObjectStreamClass[] hierarchy = ObjectStreamClass.getObjectStreamClasses (clazz);// DEBUGln ("Got class hierarchy of depth " + hierarchy.length); boolean has_read; for (int i=0; i < hierarchy.length; i++) { this.currentObjectStreamClass = hierarchy[i];// DEBUGln ("Reading fields of "// + this.currentObjectStreamClass.getName ()); has_read = true; try { this.currentObjectStreamClass.forClass (). getDeclaredMethod ("readObject", readObjectParams); } catch (NoSuchMethodException e) { has_read = false; } // XXX: should initialize fields in classes in the hierarchy // that aren't in the stream // should skip over classes in the stream that aren't in the // real classes hierarchy readFields (obj, this.currentObjectStreamClass.fields, has_read, this.currentObjectStreamClass); if (has_read) {// DEBUG ("ENDBLOCKDATA? 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m_sourceDirPath = srcDir; | m_sourceDirPath= srcDir; | public void setSourcedir(Path srcDir) { if(m_sourceDirPath == null) { m_sourceDirPath = srcDir; } else { m_sourceDirPath.append(srcDir); } } | 46463 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46463/75c0741cfb0fc75ef79c70ec78da0a1cd8144089/TestNGAntTask.java/clean/src/main/org/testng/TestNGAntTask.java | [
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if (isLinkingEnabled()) { | if (isLinkingEnabled() && !linkScheduled) { linkScheduled = true; | protected void handleSelectionChanged(SelectionChangedEvent event) { final IStructuredSelection sel = (IStructuredSelection) event .getSelection(); updateStatusLine(sel); updateActionBars(sel); dragDetected = false; if (isLinkingEnabled()) { getShell().getDisplay().asyncExec(new Runnable() { public void run() { if (dragDetected == false) { // only synchronize with editor when the selection is not the result // of a drag. Fixes bug 22274. linkToEditor(sel); } } }); } } | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/b45b3e8450d3c533a9bdd6b5f3a99a00c1063fc6/ResourceNavigator.java/buggy/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/views/navigator/ResourceNavigator.java | [
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oldController.updateDateLastModified(controller.getDateLastModified()); | oldController.updateDates(controller.getDateLastModified(), controller.getDateExpires()); | public byte[] dump( CmsObject cms, CmsResource file, String element, Locale locale, HttpServletRequest req, HttpServletResponse res ) throws ServletException, IOException { // get the current Flex controller CmsFlexController controller = (CmsFlexController)req.getAttribute(CmsFlexController.ATTRIBUTE_NAME); CmsFlexController oldController = null; if (controller != null) { // for dumping we must create an new "top level" controller, save the old one to be restored later oldController = controller; } byte[] result = null; try { // now create a new, temporary Flex controller controller = getController(cms, file, req, res, false, false); // dispatch to the JSP result = dispatchJsp(controller); // remove temporary controller req.removeAttribute(CmsFlexController.ATTRIBUTE_NAME); } finally { if (oldController != null) { // update "date last modified" oldController.updateDateLastModified(controller.getDateLastModified()); // reset saved controller req.setAttribute(CmsFlexController.ATTRIBUTE_NAME, oldController); } } return result; } | 8585 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8585/a5712925b431d3f9ac63f38c0d2f438140749c08/CmsJspLoader.java/buggy/src/org/opencms/loader/CmsJspLoader.java | [
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if(logMINOR) Logger.minor(this, "No requests, adjusted retrycount "+rga.getNumber()+" ("+rga+")"); | if(logMINOR) Logger.minor(this, "No requests, adjusted retrycount "+rga.getNumber()+" ("+rga+ ')'); | public SendableRequest removeFirst() { // Priorities start at 0 if(logMINOR) Logger.minor(this, "removeFirst()"); int choosenPriorityClass = Integer.MAX_VALUE; choosenPriorityClass = removeFirstAccordingToPriorities(choosenPriorityClass); if(choosenPriorityClass == -1) return null; SortedVectorByNumber s = priorities[choosenPriorityClass]; if(s != null){ while(true) { SectoredRandomGrabArrayWithInt rga = (SectoredRandomGrabArrayWithInt) s.getFirst(); if(rga == null) { if(logMINOR) Logger.minor(this, "No retrycount's left"); break; } SendableRequest req = (SendableRequest) rga.removeRandom(); if(rga.isEmpty()) { if(logMINOR) Logger.minor(this, "Removing retrycount "+rga.getNumber()); s.remove(rga.getNumber()); if(s.isEmpty()) { if(logMINOR) Logger.minor(this, "Should remove priority "); } } if(req == null) { if(logMINOR) Logger.minor(this, "No requests, adjusted retrycount "+rga.getNumber()+" ("+rga+")"); break; } else if(req.getPriorityClass() != choosenPriorityClass) { // Reinsert it : shouldn't happen if we are calling reregisterAll, // maybe we should ask people to report that error if seen if(logMINOR) Logger.minor(this, "In wrong priority class: "+req+" (req.prio="+req.getPriorityClass()+" but chosen="+choosenPriorityClass+")"); innerRegister(req); continue; } if(logMINOR) Logger.minor(this, "removeFirst() returning "+req+" ("+rga.getNumber()+", prio "+ req.getPriorityClass()+", retries "+req.getRetryCount()+", client "+req.getClient()+", client-req "+req.getClientRequest()+")"); ClientRequester cr = req.getClientRequest(); HashSet v = (HashSet) allRequestsByClientRequest.get(cr); v.remove(req); if(v.isEmpty()) allRequestsByClientRequest.remove(cr); return req; } } if(logMINOR) Logger.minor(this, "No requests to run"); return null; } | 8026 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8026/62fd59041864b4ed1f43adc676de6bfb5ea977f3/ClientRequestScheduler.java/clean/src/freenet/client/async/ClientRequestScheduler.java | [
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adapter = new StreamMessageAdapter(request.getBody(), conn.getOutputStream()); | adapter = connector.getStreamMessageAdapter(request.getBody(), conn.getOutputStream()); | public void run() { try { do { conn.setKeepAlive(false); HttpRequest request = conn.readRequest(); if (request == null) { break; } Map headers = new HashMap(); for (Iterator rhi = request.getHeaderIterator(); rhi.hasNext();) { Header header = (Header)rhi.next(); String headerName = header.getName(); Object headerValue = header.getValue(); // fix Mule headers? if (headerName.startsWith("X-MULE")) { headerName = headerName.substring(2); } // Parse cookies? else if (headerName.equals(HttpConnector.HTTP_COOKIES_PROPERTY)) { if (enableCookies) { Cookie[] cookies = CookieHelper.parseCookies(header, cookieSpec); if (cookies.length > 0) { // yum! headerValue = cookies; } else { // bad cookies?! continue; } } else { // no cookies for you! continue; } } // accept header & value headers.put(headerName, headerValue); } RequestLine reqLine = request.getRequestLine(); 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if (HttpConstants.HEADER_EXPECT_CONTINUE_REQUEST_VALUE.equals(expectHeaderValue)) { HttpResponse expected = new HttpResponse(); expected.setStatusLine(reqLine.getHttpVersion(), HttpConstants.SC_CONTINUE); final MuleEvent event = new MuleEvent(new MuleMessage(expected), endpoint, new MuleSession(component), true); RequestContext.setEvent(event); expected = (HttpResponse) connector.getDefaultResponseTransformer().transform(expected); conn.writeResponse(expected); } } body = request.getBodyBytes(); if (body == null) { body = reqLine.getUri(); } adapter = connector.getMessageAdapter(new Object[]{body, headers}); } UMOMessage message = new MuleMessage(adapter); if (logger.isDebugEnabled()) { logger.debug(message.getProperty(HttpConnector.HTTP_REQUEST_PROPERTY)); } // determine if the request path on this request denotes a // different receiver AbstractMessageReceiver receiver = getTargetReceiver(message, endpoint); // the respone only needs to be transformed explicitly if // A) the request was not served or B) a null result was returned HttpResponse response; if (receiver != null) { UMOMessage returnMessage = receiver.routeMessage(message, endpoint.isSynchronous(), /* TODO streaming */ null); Object tempResponse; if (returnMessage != null) { tempResponse = returnMessage.getPayload(); } else { tempResponse = new NullPayload(); } // This removes the need for users to explicitly adding // the response transformer ObjectToHttpResponse in // their config if (tempResponse instanceof HttpResponse) { response = (HttpResponse)tempResponse; } else { response = (HttpResponse)connector.getDefaultResponseTransformer() .transform(tempResponse); } response.disableKeepAlive(!((HttpConnector)connector).isKeepAlive()); } else { UMOEndpointURI uri = endpoint.getEndpointURI(); String failedPath = uri.getScheme() + "://" + uri.getHost() + ":" + uri.getPort() + getRequestPath(message); if (logger.isDebugEnabled()) { logger.debug("Failed to bind to " + failedPath); } response = new HttpResponse(); response.setStatusLine(reqLine.getHttpVersion(), HttpConstants.SC_NOT_FOUND); 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Local result = curLGen.generateLocal(type, name + "$local"); SootFieldRef fieldRef = Scene.v().makeFieldRef(cl, name, type, true); curUnits.addLast(Jimple.v().newAssignStmt(result, Jimple.v().newStaticFieldRef(fieldRef))); return result; } | Local result = curLGen.generateLocal(type, name + "$local"); SootFieldRef fieldRef = Scene.v().makeFieldRef(cl, name, type, true); curUnits.addLast(Jimple.v().newAssignStmt(result, Jimple.v().newStaticFieldRef(fieldRef))); return result; } | protected Local getStaticFieldLocal(SootClass cl, String name, Type type) { Local result = curLGen.generateLocal(type, name + "$local"); SootFieldRef fieldRef = Scene.v().makeFieldRef(cl, name, type, true); curUnits.addLast(Jimple.v().newAssignStmt(result, Jimple.v().newStaticFieldRef(fieldRef))); return result; } | 236 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/236/6bfdd4698fa4edb661b1e45946e7d37b991d8275/ClassGenHelper.java/buggy/aop/abc/src/abc/tm/weaving/weaver/ClassGenHelper.java | [
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public void writeAbstractObject(OutputStream out, Object obj) | public void writeAbstractObject(OutputStream output, Object object) | public void writeAbstractObject(OutputStream out, Object obj) { throw new Error("Not implemented for UtilDelegate"); } | 47947 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47947/1ae69e4e117f16a6f054d25da0de26f83fe5b43e/UtilDelegateImpl.java/buggy/gnu/javax/rmi/CORBA/UtilDelegateImpl.java | [
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boolean opened = _definitionsPane.open(); if (opened) { _resetInteractions(); _errorPanel.resetErrors(new CompilerError[0]); _saveButton.setEnabled(false); _compileButton.setEnabled(true); } | final String message = "DrJava, brought to you by the Java PLT " + "research group at Rice University.\n" + "http: + "Version: " + Version.BUILD_TIME; JOptionPane.showMessageDialog(MainFrame.this, message); | public void actionPerformed(ActionEvent ae) { boolean opened = _definitionsPane.open(); if (opened) { _resetInteractions(); _errorPanel.resetErrors(new CompilerError[0]); _saveButton.setEnabled(false); _compileButton.setEnabled(true); } } | 11192 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11192/a937ccbbfe3e2271b14c781e19a341556df45efe/MainFrame.java/clean/drjava/src/edu/rice/cs/drjava/ui/MainFrame.java | [
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setVisibleEditor(ref, true); | setVisibleEditor(ref, false); | public void openEditor( IEditorReference ref, IEditorReference[] innerEditors, boolean setVisible) { EditorPane pane = new MultiEditorOuterPane(ref, page, editorArea.getActiveWorkbook()); initPane(pane, ref); for (int i = 0; i < innerEditors.length; i++) { EditorPane innerPane = new MultiEditorInnerPane( pane, innerEditors[i], page, editorArea.getActiveWorkbook()); initPane(innerPane, innerEditors[i]); } // Show the editor. editorArea.addEditor(pane); if (setVisible) setVisibleEditor(ref, true); } | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/118342c3a177c242520e061a654b73535a9bd5dc/EditorAreaHelper.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/EditorAreaHelper.java | [
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rewind(_m223); | rewind(_m233); | public final String qName() throws RecognitionException, TokenStreamException { String name; returnAST = null; ASTPair currentAST = new ASTPair(); org.exist.xquery.parser.XQueryAST qName_AST = null; org.exist.xquery.parser.XQueryAST nc1_AST = null; name= null; String name2; boolean synPredMatched223 = false; if (((_tokenSet_2.member(LA(1))))) { int _m223 = mark(); synPredMatched223 = true; inputState.guessing++; try { { ncnameOrKeyword(); match(COLON); ncnameOrKeyword(); } } catch (RecognitionException pe) { synPredMatched223 = false; } rewind(_m223); inputState.guessing--; } if ( synPredMatched223 ) { name=ncnameOrKeyword(); nc1_AST = (org.exist.xquery.parser.XQueryAST)returnAST; astFactory.addASTChild(currentAST, returnAST); org.exist.xquery.parser.XQueryAST tmp165_AST = null; tmp165_AST = (org.exist.xquery.parser.XQueryAST)astFactory.create(LT(1)); astFactory.addASTChild(currentAST, tmp165_AST); match(COLON); name2=ncnameOrKeyword(); astFactory.addASTChild(currentAST, returnAST); if ( inputState.guessing==0 ) { qName_AST = (org.exist.xquery.parser.XQueryAST)currentAST.root; name= name + ':' + name2; qName_AST.copyLexInfo(nc1_AST); } qName_AST = (org.exist.xquery.parser.XQueryAST)currentAST.root; } else if ((_tokenSet_2.member(LA(1)))) { name=ncnameOrKeyword(); astFactory.addASTChild(currentAST, returnAST); qName_AST = (org.exist.xquery.parser.XQueryAST)currentAST.root; } else { throw new NoViableAltException(LT(1), getFilename()); } returnAST = qName_AST; return name; } | 2909 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2909/06537933dfbae14c444eb15b44247b312b5f47d7/XQueryParser.java/buggy/src/org/exist/xquery/parser/XQueryParser.java | [
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assertEquals(" 100.5", vs7.toString(true)); | assertEquals(" 100"+Const.DEFAULT_DECIMAL_SEPARATOR+"5", vs7.toString(true)); | public void testToStringNumber() { Value vs1 = new Value("Name", Value.VALUE_TYPE_NUMBER); assertEquals(" 0.0", vs1.toString(true)); Value vs2 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs2.setNull(); assertEquals("", vs2.toString(true)); Value vs3 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs3.setValue(100.0D); vs3.setLength(6); vs3.setNull(); assertEquals(" ", vs3.toString(true)); Value vs4 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs4.setValue(100.0D); vs4.setLength(6); assertEquals(" 000100.00", vs4.toString(true)); Value vs5 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs5.setValue(100.5D); vs5.setLength(-1); vs5.setPrecision(-1); assertEquals(" 100.5", vs5.toString(true)); Value vs6 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs6.setValue(100.5D); vs6.setLength(8); vs6.setPrecision(-1); assertEquals(" 00000100.50", vs6.toString(true)); Value vs7 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs7.setValue(100.5D); vs7.setLength(0); vs7.setPrecision(3); assertEquals(" 100.5", vs7.toString(true)); Value vs8 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs8.setValue(100.5D); vs8.setLength(5); vs8.setPrecision(3); assertEquals("100.5", vs8.toString(false)); Value vs9 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs9.setValue(100.0D); vs9.setLength(6); assertEquals("100.0", vs9.toString(false)); Value vs10 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs10.setValue(100.5D); vs10.setLength(-1); vs10.setPrecision(-1); assertEquals("100.5", vs10.toString(false)); Value vs11 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs11.setValue(100.5D); vs11.setLength(8); vs11.setPrecision(-1); assertEquals("100.5", vs11.toString(false)); Value vs12 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs12.setValue(100.5D); vs12.setLength(0); vs12.setPrecision(3); assertEquals("100.5", vs12.toString(false)); Value vs13 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs13.setValue(100.5D); vs13.setLength(5); vs13.setPrecision(3); assertEquals("100.5", vs13.toString(false)); Value vs14 = new Value("Name", Value.VALUE_TYPE_NUMBER); vs14.setValue(100.5D); vs14.setLength(5); vs14.setPrecision(3); assertEquals(" 100.500", vs14.toString(true)); } | 9547 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9547/27d7d886b40978b4e5a32209ea1cba842c34bf27/ValueTest.java/clean/test/java/be/ibridge/kettle/core/values/ValueTest.java | [
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return getMethod().getParamTypes(); } | return getMethod().getParamTypes(); } | public jq_Type[] getArgumentTypes() { return getMethod().getParamTypes(); } | 3029 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3029/d7c792e0a316dd3ac20a9fe9f758abdde9bd79fe/Bytecodes.java/buggy/joeq_core/joeq/Compiler/BytecodeAnalysis/Bytecodes.java | [
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if( points == null ) points = null; | if( points == null ){ this.points = null; return; } | public void setPoints(Float points) throws IllegalArgumentException { if( points == null ) points = null; if( points < 0 ) throw new IllegalArgumentException( "Invalid points value (<0)." ); this.points = points; } | 51025 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51025/3c113a3bac1e7279233a65c8a4cc61cf2a11f946/TaskletCorrectionImpl.java/buggy/taskmodel/taskmodel-core/src/de/thorstenberger/taskmodel/impl/TaskletCorrectionImpl.java | [
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layoutContainer(scrollbar); | public void stateChanged(ChangeEvent e) { // System.err.println(this + ".stateChanged()"); calculatePreferredSize(); layoutContainer(scrollbar); getThumbBounds(); scrollbar.repaint(); } | 50763 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50763/fd6a57fe2ed88cedb0f331b4b49081272bc198c5/BasicScrollBarUI.java/clean/core/src/classpath/javax/javax/swing/plaf/basic/BasicScrollBarUI.java | [
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stmt.close(); conn.close(); | stmt.close(); conn.close(); | public void ejbStore() throws RemoteException { PreparedStatement stmt= null; Connection conn = null; if (isDirty) { isDirty = false; try { conn = getConnection(); stmt = conn.prepareStatement("UPDATE users SET firstname=?, lastname=?, nickname=?, password=?, email=?, rating=?, balance=?, creation_date=?, region=? WHERE id=?"); stmt.setString(1,firstName); stmt.setString(2,lastName); stmt.setString(3, nickName); stmt.setString(4, password); stmt.setString(5, email); stmt.setInt(6, rating); stmt.setFloat(7, balance); stmt.setString(8, creationDate); stmt.setInt(9, regionId.intValue()); stmt.setInt(10, id.intValue()); stmt.executeUpdate(); stmt.close(); conn.close(); } catch (Exception e) { try { if(stmt != null) stmt.close(); if(conn != null) conn.close(); } catch (Exception ignore){} throw new RemoteException("Failed to update the record for user: " +e); } } } | 5750 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5750/3d57ae5a342bc10d6c418636c07193a0289ffd6b/UserBean.java/buggy/EJB_EntityBean_id_BMP/edu/rice/rubis/beans/UserBean.java | [
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return eDynamicGet( eFeature, resolve ); | return super.eGet( featureID, resolve, coreType ); | public Object eGet( EStructuralFeature eFeature, boolean resolve ) { switch ( eDerivedStructuralFeatureID( eFeature ) ) { case AttributePackage.SERIES_VALUE__NAME : return getName( ); } return eDynamicGet( eFeature, resolve ); } | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/036e8c78765730b146e5854b9d6c397a296fed86/SeriesValueImpl.java/clean/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/model/attribute/impl/SeriesValueImpl.java | [
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case ( LineStyle.DASH_DOTTED ) : | case ( LineStyle.DASH_DOTTED ) : | public void drawLine( LineRenderEvent lre ) throws ChartException { // CHECK IF THE LINE ATTRIBUTES ARE CORRECTLY DEFINED final LineAttributes lia = lre.getLineAttributes( ); if ( !validateLineAttributes( lre.getSource( ), lia ) || lia.getColor( ) == null ) { return; } // DRAW THE LINE final int iOldLineStyle = _gc.getLineStyle( ); final int iOldLineWidth = _gc.getLineWidth( ); final Color cFG = (Color) _ids.getColor( lia.getColor( ) ); int iLineStyle = SWT.LINE_SOLID; switch ( lia.getStyle( ).getValue( ) ) { case ( LineStyle.DOTTED ) : iLineStyle = SWT.LINE_DOT; break; case ( LineStyle.DASH_DOTTED ) : iLineStyle = SWT.LINE_DASHDOT; break; case ( LineStyle.DASHED ) : iLineStyle = SWT.LINE_DASH; break; } _gc.setLineStyle( iLineStyle ); _gc.setLineWidth( lia.getThickness( ) ); final Location lo1 = lre.getStart( ); final Location lo2 = lre.getEnd( ); _gc.setForeground( cFG ); R31Enhance.setAlpha( _gc, lia.getColor( ) ); _gc.drawLine( (int) ( ( lo1.getX( ) + dTranslateX ) * dScale ), (int) ( ( lo1.getY( ) + dTranslateY ) * dScale ), (int) ( ( lo2.getX( ) + dTranslateX ) * dScale ), (int) ( ( lo2.getY( ) + dTranslateY ) * dScale ) ); _gc.setLineStyle( iOldLineStyle ); _gc.setLineWidth( iOldLineWidth ); cFG.dispose( ); } | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/20bb7679d106e8105100c095c900612d5a37a46d/SwtRendererImpl.java/buggy/chart/org.eclipse.birt.chart.device.swt/src/org/eclipse/birt/chart/device/swt/SwtRendererImpl.java | [
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super(missingObjectQuestionKey, isRequired); | this(missingObjectQuestionKey, isRequired, null); | public NamedObjectParameter(String missingObjectQuestionKey, boolean isRequired) { super(missingObjectQuestionKey, isRequired); } | 3907 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3907/33224cd9347c201ad54b4574fba3473e60e38dd3/NamedObjectParameter.java/buggy/kom/java/nu/rydin/kom/frontend/text/parser/NamedObjectParameter.java | [
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hmc = null; | public void testDynamicMethods() { HibernateMappedClass hmc = new HibernateMappedClass(); hmc.setMyProp("somevalue"); InvokerHelper.invokeMethod(hmc, "save", new Object[0]); String className = hmc.getClass().getName(); hmc = null; hmc = (HibernateMappedClass)InvokerHelper.invokeStaticMethod(hmc.getClass(), "get", new Object[] { new Integer(1) }); assertEquals("somevalue", hmc.getMyProp()); } | 53275 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53275/a113f8428945f1c3a2a52ac8a13a0f4cb06dc2e6/HibernateMappedClassTests.java/clean/test/persistence/org/codehaus/groovy/grails/orm/hibernate/HibernateMappedClassTests.java | [
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if (LT(1) == IToken.t_typename) { typeName = true; consume(IToken.t_typename); } | if (LT(1) == IToken.t_typename) { typeName = true; consume(IToken.t_typename); } | protected IASTDeclaration usingClause() throws EndOfFileException, BacktrackException { IToken firstToken = consume(IToken.t_using); if (LT(1) == IToken.t_namespace) { // using-directive int endOffset = consume(IToken.t_namespace).getEndOffset(); IASTName name = null; if (LT(1) == IToken.tIDENTIFIER || LT(1) == IToken.tCOLONCOLON) name = createName(name()); else throwBacktrack(firstToken.getOffset(), endOffset - firstToken.getOffset()); endOffset = consume(IToken.tSEMI).getEndOffset(); ICPPASTUsingDirective astUD = createUsingDirective(); ((ASTNode) astUD).setOffsetAndLength(firstToken.getOffset(), endOffset - firstToken.getOffset()); astUD.setQualifiedName(name); name.setParent(astUD); name.setPropertyInParent(ICPPASTUsingDirective.QUALIFIED_NAME); return astUD; } boolean typeName = false; if (LT(1) == IToken.t_typename) { typeName = true; consume(IToken.t_typename); } IASTName name = createName(name()); int end = consume(IToken.tSEMI).getEndOffset(); ICPPASTUsingDeclaration result = createUsingDeclaration(); ((ASTNode) result).setOffsetAndLength(firstToken.getOffset(), end - firstToken.getOffset()); result.setIsTypename(typeName); result.setName(name); name.setPropertyInParent(ICPPASTUsingDeclaration.NAME); name.setParent(result); return result; } | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/8b59056395eb6c26e898030e7e1cd1b78d4db999/GNUCPPSourceParser.java/clean/core/org.eclipse.cdt.core/parser/org/eclipse/cdt/internal/core/dom/parser/cpp/GNUCPPSourceParser.java | [
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protected void addSymbols(MachO.Symbol[] array, int type, CPPFilt cppfilt, List list) { | private void addSymbols(MachO.Symbol[] array, int type, CPPFilt cppfilt, List list) { | protected void addSymbols(MachO.Symbol[] array, int type, CPPFilt cppfilt, List list) { for (int i = 0; i < array.length; i++) { String name = array[i].toString(); if (cppfilt != null) { try { name = cppfilt.getFunction(name); } catch (IOException e1) { cppfilt = null; } } long addr = array[i].n_value; int size = 0; String filename = array[i].getFilename(); IPath filePath = (filename != null) ? new Path(filename) : null; //$NON-NLS-1$ list.add(new Symbol(this, name, type, new Addr32(array[i].n_value), size, filePath, array[i].getLineNumber(addr), array[i].getLineNumber(addr + size - 1))); } } | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/96f8f74ff891fc711574b636826006b328303a0c/MachOBinaryObject.java/buggy/core/org.eclipse.cdt.core/utils/org/eclipse/cdt/utils/macho/parser/MachOBinaryObject.java | [
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UCharacterIterator siter = new UCharacterIterator(source, textoffset, source.length()); | StringCharacterIterator siter = new StringCharacterIterator(source, textoffset, source.length(), textoffset); | private final int doPrimaryCompare(boolean doHiragana4, int lowestpvalue, String source, String target, int textoffset, int cebuffer[][], int cebuffersize[]) { // Preparing the context objects for iterating over strings UCharacterIterator siter = new UCharacterIterator(source, textoffset, source.length()); CollationElementIterator scoleiter = new CollationElementIterator( siter, this); UCharacterIterator titer = new UCharacterIterator(target, textoffset, target.length()); CollationElementIterator tcoleiter = new CollationElementIterator( titer, this); // Non shifted primary processing is quite simple if (!m_isAlternateHandlingShifted_) { int hiraganaresult = 0; while (true) { int sorder = 0; // We fetch CEs until we hit a non ignorable primary or end. do { sorder = scoleiter.next(); append(cebuffer, cebuffersize, 0, sorder); sorder &= CE_PRIMARY_MASK_; } while (sorder == CollationElementIterator.IGNORABLE); int torder = 0; do { torder = tcoleiter.next(); append(cebuffer, cebuffersize, 1, torder); torder &= CE_PRIMARY_MASK_; } while (torder == CollationElementIterator.IGNORABLE); // if both primaries are the same if (sorder == torder) { // and there are no more CEs, we advance to the next level if (cebuffer[0][cebuffersize[0] - 1] == CollationElementIterator.NULLORDER) { break; } if (doHiragana4 && hiraganaresult == 0 && scoleiter.m_isCodePointHiragana_ != tcoleiter.m_isCodePointHiragana_) { if (scoleiter.m_isCodePointHiragana_) { hiraganaresult = -1; } else { hiraganaresult = 1; } } } else { // if two primaries are different, we are done return endCompare(sorder, torder, cebuffer, cebuffersize); } } // no primary difference... do the rest from the buffers return hiraganaresult; } else { // shifted - do a slightly more complicated processing :) while (true) { int sorder = getPrimaryShiftedCompareCE(scoleiter, lowestpvalue, cebuffer, cebuffersize, 0); int torder = getPrimaryShiftedCompareCE(tcoleiter, lowestpvalue, cebuffer, cebuffersize, 1); if (sorder == torder) { if (cebuffer[0][cebuffersize[0] - 1] == CollationElementIterator.NULLORDER) { break; } else { continue; } } else { return endCompare(sorder, torder, cebuffer, cebuffersize); } } // no primary difference... do the rest from the buffers } return 0; } | 5620 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5620/9172f8ef1276d1476ec2c2d2eca8ffef1cfd316f/RuleBasedCollator.java/clean/icu4j/src/com/ibm/icu/text/RuleBasedCollator.java | [
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copy.Ident(tree, name.toTypeName()), | copy.Ident(tree, name).setSymbol(sym.type().resultType().symbol()), | Tree adapt(Tree tree, int mode, Type pt) { //new TextTreePrinter().print(tree).print(" adapt " + pt).println().end();//DEBUG switch (tree.type) { case OverloadedType(Symbol[] alts, Type[] alttypes): // resolve overloading if ((mode & FUNmode) == 0) { try { infer.exprAlternative(tree, alts, alttypes, pt); } catch (Type.Error ex) { error(tree.pos, ex.msg); } switch (tree.type) { case OverloadedType(_, _): // overload resolution failed bcs no alternative matched prototype. typeError(tree.pos, tree.type, pt); tree.setSymbol(Symbol.ERROR).setType(Type.ErrorType); break; default: return adapt(tree, mode, pt); } } break; case PolyType(Symbol[] tparams, Type restp): // apply parameterless functions // instantiate polymorphic expressions if (tparams.length == 0) { return adapt(tree.setType(restp), mode, pt); } else if ((mode & (FUNmode | POLYmode)) == 0) { try { tree = infer.exprInstance(tree, tparams, restp, pt); } catch (Type.Error ex) { tree = error(tree.pos, ex.msg); } return adapt(tree, mode, pt); } break; case MethodType(_, _): // convert unapplied methods to functions. if ((mode & (EXPRmode | FUNmode)) == EXPRmode && infer.isCompatible(tree.type, pt)) { checkEtaExpandable(tree.pos, tree.type); return transform(desugarize.etaExpand(tree, tree.type), mode, pt); } else if ((mode & (CONSTRmode | FUNmode)) == CONSTRmode) { return error(tree.pos, "missing arguments for class constructor"); } } if ((mode & PATTERNmode) != 0) { if (tree.isType()) { Symbol clazz = tree.type.unalias().symbol(); if (clazz.isCaseClass()) { // set type to instantiated case class constructor tree.type = clazz.constructor().type(); switch (tree.type) { case PolyType(Symbol[] tparams, Type restp): try { infer.constructorInstance(tree, tparams, restp, pt); } catch (Type.Error ex) { if (pt != Type.ErrorType) error(tree.pos, ex.msg); return tree.setType(Type.ErrorType); } if (!(tree.type instanceof Type.MethodType)) tree = make.Apply(tree.pos, tree, Tree.EMPTY_ARRAY) .setType(tree.type); } } else if (clazz.isSubClass(definitions.SEQ_CLASS)) { // set type to instantiated sequence class constructor Type seqtp = dropVarArgs(pt.baseType(clazz)); if (seqtp != Type.NoType) { tree.type = seqConstructorType(seqtp, pt); } else { error(tree.pos, "expected pattern type " + pt + " does not conform to sequence " + clazz); } } else if (tree.type != Type.ErrorType) { error(tree.pos, tree.type.symbol() + " is neither a case class constructor nor a sequence class constructor"); } } if ((mode & FUNmode) != 0) { return tree; } else { Symbol sym = tree.symbol(); // convert nullary case methods to types // check that other idents or selects are stable. switch (tree) { case Ident(Name name): if (sym != null && isNullaryMethod(sym) && (sym.flags & CASE) != 0) return transform( make.Apply( tree.pos, copy.Ident(tree, name.toTypeName()), Tree.EMPTY_ARRAY), mode, pt); else checkStable(tree); break; case Select(Tree qual, Name name): if (sym != null && isNullaryMethod(sym) && (sym.flags & CASE) != 0) return transform( make.Apply( tree.pos, copy.Select(tree, qual, name.toTypeName()), Tree.EMPTY_ARRAY), mode, pt); else checkStable(tree); } } } else if ((mode & EXPRmode) != 0) { if ((mode & FUNmode) != 0) { if (tree.type.isObjectType()) { // insert apply method Symbol applyMeth = tree.type.lookup(Names.apply); if (applyMeth != Symbol.NONE && isAccessible(applyMeth, tree)) { applyMeth.flags |= (ACCESSED | SELECTOR); tree = make.Select(tree.pos, tree, Names.apply) .setSymbol(applyMeth) .setType(tree.type.memberType(applyMeth)); return adapt(tree, mode, pt); } } } else if ((mode & QUALmode) == 0) { // check that packages and static modules are not used as values Symbol sym = tree.symbol(); if (sym != null && sym.kind != ERROR && !sym.isValue() && tree.isTerm()) { error(tree.pos, tree.symbol() + " is not a value"); } } } Type owntype = tree.type; if ((mode & (CONSTRmode | FUNmode)) == (CONSTRmode)) owntype = owntype.instanceType(); if (!(owntype instanceof Type.PolyType || owntype.isSubType(pt))) { typeError(tree.pos, owntype, pt); explainTypes(owntype, pt); tree.type = Type.ErrorType; } return tree; } | 49529 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49529/3f3e6accb7494b2a5f9dff9e40a80ce07685cf92/Analyzer.java/clean/sources/scalac/typechecker/Analyzer.java | [
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private org.omg.CORBA.portable.InputStream invoke_internal ( org.omg.CORBA.Object self, org.omg.CORBA.portable.OutputStream os, org.omg.Messaging.ReplyHandler replyHandler, boolean async ) throws ApplicationException, RemarshalException { RequestOutputStream ros = ( RequestOutputStream ) os; ReplyReceiver receiver = null; ClientInterceptorHandler interceptors = new ClientInterceptorHandler ( orb, ros, self, this, piorOriginal, connection ); interceptors.handle_send_request(); try { if ( !ros.response_expected() ) // oneway op { invoke_oneway (ros, interceptors); return null; } else // response expected, synchronous or asynchronous { receiver = new ReplyReceiver ( this, ros.operation(), ros.getReplyEndTime(), interceptors, replyHandler ); // Store the receiver in pending_replies, so in the // case of a LocationForward a RemarshalException can // be thrown to *all* waiting threads. synchronized ( pending_replies ) { pending_replies.add ( receiver ); } synchronized ( bind_sync ) { if ( ros.getConnection() == connection ) { //RequestOutputStream has been created for //exactly this connection connection.sendRequest( ros, receiver, ros.requestId(), true ); // response expected } else { if (logger.isDebugEnabled()) logger.debug("invoke: RemarshalException"); // RequestOutputStream has been created for // another connection, so try again throw new RemarshalException(); } } } } catch ( org.omg.CORBA.SystemException cfe ) { if (logger.isDebugEnabled()) logger.debug("invoke: SystemException"); interceptors.handle_receive_exception ( cfe ); if ( cfe instanceof org.omg.CORBA.TRANSIENT ) { // The exception is a TRANSIENT, so try rebinding. if ( try_rebind() ) { throw new RemarshalException(); } } throw cfe; } if ( !async && receiver != null ) { // Synchronous invocation, response expected. // This call blocks until the reply arrives. org.omg.CORBA.portable.InputStream is = receiver.getReply(); return is; } else { return null; } } | 46355 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46355/b9e614c7400c1367aac9cb543b398e9b6ba1628a/Delegate.java/clean/src/org/jacorb/orb/Delegate.java | [
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this.testInteger = Integer.valueOf(0); | this.testInteger = new Integer(0); | public void testApplyConstraint() { // test validate email // --------------------------------------------------------------------- ConstrainedProperty cp = new ConstrainedProperty(ConstrainedPropertyTests.class,"testEmail", String.class); cp.applyConstraint( ConstrainedProperty.EMAIL_CONSTRAINT, new Boolean(true) ); assertTrue(cp.getAppliedConstraints().size() == 1); Errors errors = new BindException(this,"testObject"); Constraint c = null; for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testEmail, errors); } assertTrue(errors.hasErrors()); FieldError error = errors.getFieldError("testEmail"); assertNotNull(error); assertEquals("rubbish_email",error.getRejectedValue()); this.testEmail = "avalidemail@hotmail.com"; errors = new BindException(this,"testObject"); c.validate(this, this.testEmail,errors); assertFalse(errors.hasErrors()); // test validate url // --------------------------------------------------------------------- cp = new ConstrainedProperty(ConstrainedPropertyTests.class,"testURL", String.class); cp.applyConstraint( ConstrainedProperty.URL_CONSTRAINT, new Boolean(true) ); assertTrue(cp.getAppliedConstraints().size() == 1); errors = new BindException(this,"testObject"); for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testURL, errors); } // validate that an invalid URL value yields an error assertTrue(errors.hasErrors()); error = errors.getFieldError("testURL"); assertNotNull(error); assertEquals(this.testURL,error.getRejectedValue()); // validate that a valid URL value does *not* yield an error this.testURL = "http://www.google.com"; errors = new BindException(this,"testObject"); c.validate(this, this.testURL,errors); assertFalse(errors.hasErrors()); // validate that a null URL value yields an error this.testURL = null; errors = new BindException(this,"testObject"); c.validate(this, this.testURL,errors); assertTrue(errors.hasErrors()); error = errors.getFieldError("testURL"); assertNotNull(error); // test blank constraint // --------------------------------------------------------------------- cp.applyConstraint( ConstrainedProperty.URL_CONSTRAINT, null ); cp.applyConstraint( ConstrainedProperty.BLANK_CONSTRAINT, new Boolean(false) ); assertTrue(cp.getAppliedConstraints().size() == 1); errors = new BindException(this,"testObject"); this.testURL = ""; for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testURL, errors); } assertTrue(errors.hasErrors()); error = errors.getFieldError("testURL"); System.out.println(error); assertNotNull(error); // test nullable constraint // --------------------------------------------------------------------- cp.applyConstraint( ConstrainedProperty.BLANK_CONSTRAINT, new Boolean(true) ); cp.applyConstraint( ConstrainedProperty.NULLABLE_CONSTRAINT, new Boolean(false) ); errors = new BindException(this,"testObject"); this.testURL = null; for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testURL, errors); } assertTrue(errors.hasErrors()); error = errors.getFieldError("testURL"); System.out.println(error); assertNotNull(error); // test inList constraint // --------------------------------------------------------------------- cp.applyConstraint( ConstrainedProperty.NULLABLE_CONSTRAINT, new Boolean(true) ); List list = new ArrayList(); list.add("one"); list.add("two"); list.add("three"); this.testURL = "something"; cp.applyConstraint( ConstrainedProperty.IN_LIST_CONSTRAINT, list ); errors = new BindException(this,"testObject"); for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testURL, errors); } assertTrue(errors.hasErrors()); error = errors.getFieldError("testURL"); System.out.println(error); assertNotNull(error); // Validate that the error includes the correct error code assertTrue(Arrays.asList(error.getCodes()).contains("constrainedPropertyTests.testURL.not.inList")); this.testURL = "two"; errors = new BindException(this,"testObject"); c.validate(this, this.testURL,errors); assertFalse(errors.hasErrors()); // test length constraint // --------------------------------------------------------------------- cp = new ConstrainedProperty(ConstrainedPropertyTests.class,"testURL", String.class); cp.applyConstraint( ConstrainedProperty.LENGTH_CONSTRAINT, new IntRange(5,15) ); errors = new BindException(this,"testObject"); for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testURL, errors); } assertTrue(errors.hasErrors()); error = errors.getFieldError("testURL"); System.out.println(error); assertNotNull(error); this.testURL = "absolutelytotallytoolong"; errors = new BindException(this,"testObject"); c.validate(this, this.testURL,errors); assertTrue(errors.hasErrors()); // test min constraint // --------------------------------------------------------------------- final Date BEGINNING_OF_TIME = new Date(0); final Date NOW = new Date(); final Date ONE_DAY_FROM_NOW = new Date(System.currentTimeMillis() + 86400000); this.testDate = BEGINNING_OF_TIME; cp = new ConstrainedProperty(ConstrainedPropertyTests.class,"testDate", String.class); cp.applyConstraint( ConstrainedProperty.MIN_CONSTRAINT, NOW); errors = new BindException(this,"testObject"); for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testDate, errors); } // validate that a value *less than* the minimum value yields an error assertTrue(errors.hasErrors()); error = errors.getFieldError("testDate"); System.out.println(error); assertNotNull(error); // validate that a value *equal to* the minimum value does *not* yield an error this.testDate = NOW; errors = new BindException(this,"testObject"); c.validate(this, this.testDate,errors); assertFalse(errors.hasErrors()); // validate that a value *greater than* the minimum value does *not* yield an error this.testDate = ONE_DAY_FROM_NOW; errors = new BindException(this,"testObject"); c.validate(this, this.testDate,errors); assertFalse(errors.hasErrors()); // validate that a null value yields an error this.testDate = null; errors = new BindException(this,"testObject"); c.validate(this, this.testDate,errors); assertTrue(errors.hasErrors()); error = errors.getFieldError("testDate"); System.out.println(error); assertNotNull(error); // test max constraint // --------------------------------------------------------------------- this.testDate = BEGINNING_OF_TIME; cp = new ConstrainedProperty(ConstrainedPropertyTests.class,"testDate", String.class); cp.applyConstraint( ConstrainedProperty.MAX_CONSTRAINT, NOW); errors = new BindException(this,"testObject"); for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testDate, errors); } // validate that a value *less than* the maximum value does *not* yield an error assertFalse(errors.hasErrors()); // validate that a value *equal to* the maximum value does *not* yield an error this.testDate = NOW; errors = new BindException(this,"testObject"); c.validate(this, this.testDate,errors); assertFalse(errors.hasErrors()); // validate that a value *greater than* the maximum value yields an error this.testDate = ONE_DAY_FROM_NOW; errors = new BindException(this,"testObject"); c.validate(this, this.testDate,errors); assertTrue(errors.hasErrors()); error = errors.getFieldError("testDate"); System.out.println(error); assertNotNull(error); // validate that a null value yields an error this.testDate = null; errors = new BindException(this,"testObject"); c.validate(this, this.testDate,errors); assertTrue(errors.hasErrors()); error = errors.getFieldError("testDate"); System.out.println(error); assertNotNull(error); // test maxSize constraint // --------------------------------------------------------------------- this.testInteger = Integer.valueOf(Integer.MIN_VALUE); cp = new ConstrainedProperty(ConstrainedPropertyTests.class,"testInteger", String.class); cp.applyConstraint( ConstrainedProperty.MAX_SIZE_CONSTRAINT, Integer.valueOf(0)); errors = new BindException(this,"testObject"); for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testInteger, errors); } // validate that a value *less than* the maximum value does *not* yield an error assertFalse(errors.hasErrors()); // validate that a value *equal to* the maximum value does *not* yield an error this.testInteger = Integer.valueOf(0); errors = new BindException(this,"testObject"); c.validate(this, this.testInteger,errors); assertFalse(errors.hasErrors()); // validate that a value *greater than* the maximum value yields an error this.testInteger = Integer.valueOf(Integer.MAX_VALUE); errors = new BindException(this,"testObject"); c.validate(this, this.testInteger,errors); assertTrue(errors.hasErrors()); error = errors.getFieldError("testInteger"); assertNotNull(error); // test minSize constraint // --------------------------------------------------------------------- this.testInteger = Integer.valueOf(Integer.MAX_VALUE); cp = new ConstrainedProperty(ConstrainedPropertyTests.class,"testInteger", String.class); cp.applyConstraint( ConstrainedProperty.MIN_SIZE_CONSTRAINT, Integer.valueOf(0)); errors = new BindException(this,"testObject"); for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testInteger, errors); } // validate that a value *greater than* the minimum value does *not* yield an error assertFalse(errors.hasErrors()); // validate that a value *equal to* the minimum value does *not* yield an error this.testInteger = Integer.valueOf(0); errors = new BindException(this,"testObject"); c.validate(this, this.testInteger,errors); assertFalse(errors.hasErrors()); // validate that a value *less than* the minimum value yields an error this.testInteger = Integer.valueOf(Integer.MIN_VALUE); errors = new BindException(this,"testObject"); c.validate(this, this.testInteger,errors); assertTrue(errors.hasErrors()); error = errors.getFieldError("testInteger"); assertNotNull(error); // test validate matches (regex) // --------------------------------------------------------------------- cp = new ConstrainedProperty(ConstrainedPropertyTests.class,"testURL", String.class); cp.applyConstraint( ConstrainedProperty.MATCHES_CONSTRAINT, "[a-zA-Z]" ); assertTrue(cp.getAppliedConstraints().size() == 1); errors = new BindException(this,"testObject"); for (Iterator i = cp.getAppliedConstraints().iterator(); i.hasNext();) { c = (Constraint) i.next(); c.validate(this, this.testURL, errors); } // validate that a value *not* matching the regex yields an error this.testURL = "$"; assertTrue(errors.hasErrors()); error = errors.getFieldError("testURL"); assertNotNull(error); // validate that a value matching the regex does *not* yield an error this.testURL = "j"; errors = new BindException(this,"testObject"); c.validate(this, this.testURL,errors); assertFalse(errors.hasErrors()); // validate that a null value yields an error this.testURL = null; errors = new BindException(this,"testObject"); c.validate(this, this.testURL,errors); assertTrue(errors.hasErrors()); error = errors.getFieldError("testURL"); assertNotNull(error); } | 50831 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50831/37ceae746fefa3ebb8dd0ecb363ae64909d00888/ConstrainedPropertyTests.java/buggy/test/commons/org/codehaus/groovy/grails/validation/ConstrainedPropertyTests.java | [
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BeanProperty(Method getter, Method setter) | BeanProperty(MemberBox getter, MemberBox setter) | BeanProperty(Method getter, Method setter) { this.getter = getter; this.setter = setter; } | 13991 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13991/004397fe5ef540e453f60552849d0320b106ace4/JavaMembers.java/buggy/js/rhino/src/org/mozilla/javascript/JavaMembers.java | [
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Object iidStr = cl.getField(IID_STRING).get(cl); if (iidStr instanceof String) { IID iid = new IID((String)iidStr); | Object iidTmp = cl.getField(IID_STRING).get(cl); if (iidTmp instanceof IID) { IID iid = (IID)iidTmp; | private static Hashtable registerInterfaces(Class cl) { try { Object iidStr = cl.getField(IID_STRING).get(cl); if (iidStr instanceof String) { IID iid = new IID((String)iidStr); // if this iface hasn't been registered, yet if (interfaces.get(iid) == null) { String[] methodNames = Utilities.getInterfaceMethodNames((String)iidStr); if (methodNames != null) { Method[] rmethods = new Method[methodNames.length]; Class[] ifaces = cl.getInterfaces(); // check for single inheritance (xpcom) if (ifaces.length < 2) { // recursively get all parent interface methods Hashtable mhash = null; Method[] methods = cl.getDeclaredMethods(); // the very super iface if (ifaces.length == 0) { mhash = new Hashtable(methods.length); } else { mhash = new Hashtable(registerInterfaces(ifaces[0])); } for (int i = 0; i < methods.length; i++) { mhash.put(methods[i].getName(), methods[i]); } for (int j = methodNames.length - 1; j >= 0; j--) { rmethods[j] = (Method)mhash.get(subscriptMethodName(methodNames[j])); } interfaces.put(iid, cl); iMethods.put(iid, new MethodArray(rmethods, mhash)); debug(cl.getName() + ": " + iid + " ( " + cl + " )"); printMethods(rmethods); return mhash; } } // simply pass iface methods } else { MethodArray m = (MethodArray)iMethods.get(iid); if (m != null) { return m.names; } } } } catch (NoSuchFieldException e) { // the interface doesn't define IID field debug("no such field..."); } catch (IllegalAccessException e1) { debug("can't access field..."); } return new Hashtable(); } | 11366 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11366/41fe7095a7d54e02dd8c0bac80b7264fac98049b/InterfaceRegistry.java/clean/java/xpcom/java/classes/org/mozilla/xpcom/InterfaceRegistry.java | [
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return contains(r.x, r.y, r.width, r.height); | return (x >= this.x && x <= this.x + this.width && y >= this.y && y <= this.y + this.height); | public boolean contains(Rectangle r) { return contains(r.x, r.y, r.width, r.height); } | 5916 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5916/708062224a502c41561e122dcde5accf23f77ad9/Rectangle.java/buggy/libjava/java/awt/Rectangle.java | [
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protected void removeEdge(Object edge) { if (isTreeEdge(edge)) { replaceTreeEdge(edge); } } | protected abstract void removeEdge(Object edge); | protected void removeEdge(Object edge) { if (isTreeEdge(edge)) { replaceTreeEdge(edge); } } | 7616 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7616/5c358c8ed2d5c3d5c3e4ccdd92928173ede89561/GraphSpanningTree.java/buggy/trunk/taverna1.0/src/org/embl/ebi/escience/scuflui/graph/GraphSpanningTree.java | [
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return new WWinPluginAction(actionElement, ATT_CLASS, (IWorkbenchWindow)target,definitionId); | return new WWinPluginAction(actionElement, ATT_CLASS, (IWorkbenchWindow)target, defId, actionStyle); | private PluginAction createAction(int targetType, IConfigurationElement actionElement, Object target) { switch (targetType) { case T_VIEW: return new ViewPluginAction(actionElement, ATT_CLASS, (IViewPart)target,definitionId); case T_EDITOR: return new EditorPluginAction(actionElement, ATT_CLASS, (IEditorPart)target,definitionId); case T_WORKBENCH: return new WWinPluginAction(actionElement, ATT_CLASS, (IWorkbenchWindow)target,definitionId); case T_WORKBENCH_PULLDOWN: return new WWinPluginPulldown(actionElement, ATT_CLASS, (IWorkbenchWindow)target,definitionId); case T_POPUP: return new ObjectPluginAction(actionElement, ATT_CLASS,definitionId); default: WorkbenchPlugin.log("Unknown Action Type: " + targetType);//$NON-NLS-1$ return null; }} | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/dff9886f34ad3b8dcd475481030dcd03671c04c0/ActionDescriptor.java/buggy/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/ActionDescriptor.java | [
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if (maps[i].hasTask()) { | int realIdx = (i + firstMapToTry) % maps.length; if (maps[realIdx].hasTask()) { | public Task obtainNewMapTask(String taskTracker, TaskTrackerStatus tts) { if (! tasksInited) { LOG.info("Cannot create task split for " + profile.getJobId()); return null; } Task t = null; int cacheTarget = -1; int stdTarget = -1; int specTarget = -1; // // We end up creating two tasks for the same bucket, because // we call obtainNewMapTask() really fast, twice in a row. // There's not enough time for the "recentTasks" // // // Compute avg progress through the map tasks // double avgProgress = status.mapProgress() / maps.length; // // See if there is a split over a block that is stored on // the TaskTracker checking in. That means the block // doesn't have to be transmitted from another node. // for (int i = 0; i < maps.length; i++) { if (maps[i].hasTaskWithCacheHit(taskTracker, tts)) { if (cacheTarget < 0) { cacheTarget = i; break; } } } // // If there's no cached target, see if there's // a std. task to run. // if (cacheTarget < 0) { for (int i = 0; i < maps.length; i++) { if (maps[i].hasTask()) { if (stdTarget < 0) { stdTarget = i; break; } } } } // // If no cached-target and no std target, see if // there's a speculative task to run. // if (cacheTarget < 0 && stdTarget < 0) { for (int i = 0; i < maps.length; i++) { if (maps[i].hasSpeculativeTask(avgProgress)) { if (specTarget < 0) { specTarget = i; break; } } } } // // Run whatever we found // if (cacheTarget >= 0) { t = maps[cacheTarget].getTaskToRun(taskTracker, tts, avgProgress); } else if (stdTarget >= 0) { t = maps[stdTarget].getTaskToRun(taskTracker, tts, avgProgress); } else if (specTarget >= 0) { t = maps[specTarget].getTaskToRun(taskTracker, tts, avgProgress); } return t; } | 53958 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53958/4ee62812940075bac6919b94b6fb0d20137bd78c/JobInProgress.java/clean/src/java/org/apache/hadoop/mapred/JobInProgress.java | [
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public ContentType(String header) { super(header); parseValue(); } | public ContentType(String header) { super(header); } | public ContentType(String header) { super(header); parseValue(); } | 6965 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6965/545a47e80f124ea231945f86e3fb9cb62048b4e8/MimeCompoundHeader.java/buggy/ZimbraServer/src/java/com/zimbra/cs/mime/MimeCompoundHeader.java | [
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} | } | private void validateDTDattribute(QName element, String attValue, XMLAttributeDecl attributeDecl) throws XNIException { switch (attributeDecl.simpleType.type) { case XMLSimpleType.TYPE_ENTITY: { // NOTE: Save this information because invalidStandaloneAttDef boolean isAlistAttribute = attributeDecl.simpleType.list; try { if (isAlistAttribute) { fValENTITIES.validate(attValue, null); } else { fValENTITY.validate(attValue, null); } } catch (InvalidDatatypeValueException ex) { String key = ex.getKeyIntoReporter(); fErrorReporter.reportError(XMLMessageFormatter.XML_DOMAIN, key, new Object[]{ ex.getMessage()}, XMLErrorReporter.SEVERITY_ERROR ); } break; } case XMLSimpleType.TYPE_NOTATION: case XMLSimpleType.TYPE_ENUMERATION: { boolean found = false; String [] enumVals = attributeDecl.simpleType.enumeration; if (enumVals == null) { found = false; } else for (int i = 0; i < enumVals.length; i++) { if (attValue == enumVals[i] || attValue.equals(enumVals[i])) { found = true; break; } } if (!found) { StringBuffer enumValueString = new StringBuffer(); if (enumVals != null) for (int i = 0; i < enumVals.length; i++) { enumValueString.append(enumVals[i]+" "); } fErrorReporter.reportError(XMLMessageFormatter.XML_DOMAIN, "MSG_ATTRIBUTE_VALUE_NOT_IN_LIST", new Object[]{attributeDecl.name.rawname, attValue, enumValueString}, XMLErrorReporter.SEVERITY_ERROR); } break; } case XMLSimpleType.TYPE_ID: { try { fValID.validate(attValue, null); } catch (InvalidDatatypeValueException ex) { String key = ex.getKeyIntoReporter(); fErrorReporter.reportError(XMLMessageFormatter.XML_DOMAIN, key, new Object[] { ex.getMessage() }, XMLErrorReporter.SEVERITY_ERROR ); } break; } case XMLSimpleType.TYPE_IDREF: { boolean isAlistAttribute = attributeDecl.simpleType.list;//Caveat - Save this information because invalidStandaloneAttDef try { if (isAlistAttribute) { //System.out.println("values = >>" + value + "<<" ); fValIDRefs.validate(attValue, null); } else { fValIDRef.validate(attValue, null); } } catch (InvalidDatatypeValueException ex) { String key = ex.getKeyIntoReporter(); if (key == null){ key = "IDREFSInvalid"; } fErrorReporter.reportError(XMLMessageFormatter.XML_DOMAIN, key, new Object[]{ ex.getMessage()}, XMLErrorReporter.SEVERITY_ERROR ); } break; } case XMLSimpleType.TYPE_NMTOKEN: { boolean isAlistAttribute = attributeDecl.simpleType.list;//Caveat - Save this information because invalidStandaloneAttDef //changes fTempAttDef try { if (isAlistAttribute) { fValNMTOKENS.validate(attValue, null); } else { fValNMTOKEN.validate(attValue, null); } } catch (InvalidDatatypeValueException ex) { if (isAlistAttribute){ fErrorReporter.reportError(XMLMessageFormatter.XML_DOMAIN, "NMTOKENSInvalid", new Object[] { attValue }, XMLErrorReporter.SEVERITY_ERROR); } else { fErrorReporter.reportError(XMLMessageFormatter.XML_DOMAIN, "NMTOKENInvalid", new Object[] { attValue }, XMLErrorReporter.SEVERITY_ERROR); } } break; } } // switch } // validateDTDattribute(QName,String,XMLAttributeDecl) | 1831 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1831/ee3cf4ff9e64a0ae2d3c850b7c9b40e51771781d/XMLDTDValidator.java/clean/src/org/apache/xerces/impl/dtd/XMLDTDValidator.java | [
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sbNewRepresentation.append("H"); | sbNewRepresentation.append("H"); | private String getConvertedOrthogonalSampleDataRepresentation(String sOldRepresentation) { StringTokenizer strtok = new StringTokenizer(sOldRepresentation, ","); NumberFormat nf = NumberFormat.getNumberInstance(); StringBuffer sbNewRepresentation = new StringBuffer(""); int iValueCount = 0; while (strtok.hasMoreTokens()) { String sElement = strtok.nextToken().trim(); try { if (nf.parse(sElement).doubleValue() < 0) { // If the value is negative, use an arbitrary positive value sElement = String.valueOf(4.0 + iValueCount); iValueCount++; } } catch (ParseException e ) { sElement = String.valueOf(4.0 + iValueCount); iValueCount++; } sbNewRepresentation.append("H"); sbNewRepresentation.append(sElement); sbNewRepresentation.append(" "); sbNewRepresentation.append(" L"); sbNewRepresentation.append(sElement); sbNewRepresentation.append(" "); sbNewRepresentation.append(" O"); sbNewRepresentation.append(sElement); sbNewRepresentation.append(" "); sbNewRepresentation.append(" C"); sbNewRepresentation.append(sElement); sbNewRepresentation.append(","); } return sbNewRepresentation.toString().substring(0, sbNewRepresentation.length() - 1); } | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/7793e94b4d7fab5891f226c6c937e37d85bebad8/StockChart.java/buggy/chart/org.eclipse.birt.chart.ui.extension/src/org/eclipse/birt/chart/ui/swt/type/StockChart.java | [
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Calendar result = Calendar.getInstance(); result.setTime(this.getEnrollmentTimeEnd()); return result; | if (this.getEnrollmentTimeEnd() != null) { Calendar result = Calendar.getInstance(); result.setTime(this.getEnrollmentTimeEnd()); return result; } return null; | public Calendar getEnrollmentEndTime() { Calendar result = Calendar.getInstance(); result.setTime(this.getEnrollmentTimeEnd()); return result; } | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/7b56a334569bb51b44e37ff04712f0c2cb817264/Seminary.java/clean/src/net/sourceforge/fenixedu/domain/Seminaries/Seminary.java | [
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if((!dontCompress) || alreadyCompressedCodec >= 0) { | if((!dontCompress) || (alreadyCompressedCodec >= 0)) { | static Compressed compress(Bucket sourceData, boolean dontCompress, short alreadyCompressedCodec, long sourceLength, long MAX_LENGTH_BEFORE_COMPRESSION, long MAX_COMPRESSED_DATA_LENGTH, boolean shortLength) throws KeyEncodeException, IOException { byte[] finalData = null; short compressionAlgorithm = -1; // Try to compress it - even if it fits into the block, // because compressing it improves its entropy. if(sourceData.size() > MAX_LENGTH_BEFORE_COMPRESSION) throw new KeyEncodeException("Too big"); if((!dontCompress) || alreadyCompressedCodec >= 0) { byte[] cbuf = null; if(alreadyCompressedCodec >= 0) { if(sourceData.size() > MAX_COMPRESSED_DATA_LENGTH) throw new KeyEncodeException("Too big (precompressed)"); compressionAlgorithm = alreadyCompressedCodec; cbuf = BucketTools.toByteArray(sourceData); if(sourceLength > MAX_LENGTH_BEFORE_COMPRESSION) throw new CHKEncodeException("Too big"); } else { if (sourceData.size() > NodeCHK.BLOCK_SIZE) { // Determine the best algorithm for (int i = 0; i < Compressor.countCompressAlgorithms(); i++) { Compressor comp = Compressor .getCompressionAlgorithmByDifficulty(i); ArrayBucket compressedData; try { compressedData = (ArrayBucket) comp.compress( sourceData, new ArrayBucketFactory(), NodeCHK.BLOCK_SIZE); } catch (IOException e) { throw new Error(e); } catch (CompressionOutputSizeException e) { continue; } if (compressedData.size() <= MAX_COMPRESSED_DATA_LENGTH) { compressionAlgorithm = comp .codecNumberForMetadata(); sourceLength = sourceData.size(); try { cbuf = BucketTools.toByteArray(compressedData); // FIXME provide a method in ArrayBucket } catch (IOException e) { throw new Error(e); } break; } } } } if(cbuf != null) { // Use it int compressedLength = cbuf.length; finalData = new byte[compressedLength+(shortLength?2:4)]; System.arraycopy(cbuf, 0, finalData, shortLength?2:4, compressedLength); if(!shortLength) { finalData[0] = (byte) ((sourceLength >> 24) & 0xff); finalData[1] = (byte) ((sourceLength >> 16) & 0xff); finalData[2] = (byte) ((sourceLength >> 8) & 0xff); finalData[3] = (byte) ((sourceLength) & 0xff); } else { finalData[0] = (byte) ((sourceLength >> 8) & 0xff); finalData[1] = (byte) ((sourceLength) & 0xff); } } } if(finalData == null) { if(sourceData.size() > NodeCHK.BLOCK_SIZE) { throw new CHKEncodeException("Too big"); } finalData = BucketTools.toByteArray(sourceData); } return new Compressed(finalData, compressionAlgorithm); } | 45341 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45341/ca136843ae9ecb30cadada58a33a5dc2cf8ad064/Key.java/buggy/src/freenet/keys/Key.java | [
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int assignmentType = ((Integer) assignmentTypeVector.get(i)).intValue(); List submissions = (List) (assignmentSubmissionVector.get(i)); submissionWithGrade = null; for (int k = 0; k < submissions.size() && submissionWithGrade == null; k++) { AssignmentSubmission s = (AssignmentSubmission) submissions.get(k); submitterIds = (List) s.getSubmitterIds(); for (int submitterIndex = 0; submitterIndex < submitterIds.size(); submitterIndex++) { submitterId = (String) submitterIds.get(submitterIndex); if (submitterId.equals(member.getId())) | Assignment a = (Assignment) assignmentList.get(i); int assignmentType = a.getContent().getTypeOfGrade(); AssignmentSubmission submission = getSubmission(a.getReference(), member); if (submission != null) { if (submission.getGraded() && submission.getGradeReleased()) { if (assignmentType == 3) | public byte[] getGradesSpreadsheet(String ref) throws IdUnusedException, PermissionException { String typeGradesString = new String(REF_TYPE_GRADES + Entity.SEPARATOR); String context = ref.substring(ref.indexOf(typeGradesString) + typeGradesString.length()); // get site title for display purpose String siteTitle = ""; try { Site s = SiteService.getSite(context); siteTitle = s.getTitle(); } catch (Exception e) { // ignore exception } short rowNum = 0; HSSFWorkbook wb = new HSSFWorkbook(); HSSFSheet sheet = wb.createSheet(siteTitle); // Create a row and put some cells in it. 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HSSFRow row = sheet.createRow(rowNum++); row.createCell((short) 0).setCellValue(rb.getString("download.spreadsheet.title")); // empty line row = sheet.createRow(rowNum++); row.createCell((short) 0).setCellValue(""); // site title row = sheet.createRow(rowNum++); row.createCell((short) 0).setCellValue(rb.getString("download.spreadsheet.site") + siteTitle); // download time row = sheet.createRow(rowNum++); row.createCell((short) 0).setCellValue( rb.getString("download.spreadsheet.date") + TimeService.newTime().toStringLocalFull()); // empty line row = sheet.createRow(rowNum++); row.createCell((short) 0).setCellValue(""); // the bold font HSSFFont font = wb.createFont(); font.setBoldweight(HSSFFont.BOLDWEIGHT_BOLD); // the cell style with bold font HSSFCellStyle style = wb.createCellStyle(); style.setFont(font); // set up the header cells row = sheet.createRow(rowNum++); short cellNum = 0; // user enterprise id column HSSFCell cell = row.createCell(cellNum++); cell.setCellStyle(style); cell.setCellValue(rb.getString("download.spreadsheet.column.userid")); // user name column cell = row.createCell(cellNum++); cell.setCellStyle(style); cell.setCellValue(rb.getString("download.spreadsheet.column.name")); Iterator assignments = getAssignmentsForContext(context); Vector assignmentTypeVector = new Vector(); Vector assignmentSubmissionVector = new Vector(); int index = 0; List members = new Vector(); while (assignments.hasNext()) { Assignment a = (Assignment) assignments.next(); // for column header, check allow grade permission based on each assignment if (allowGradeSubmission(a.getReference())) { String deleted = a.getProperties().getProperty(ResourceProperties.PROP_ASSIGNMENT_DELETED); if ((deleted == null || deleted.equals("")) && (!a.getDraft()) && (a.getOpenTime().before(TimeService.newTime()))) { if (index == 0) { List allowAddAssignmentUsers = allowAddAssignmentUsers(a.getContext()); List allowAddSubmissionUsers = allowAddSubmissionUsers(a.getReference()); for (int i = 0; i < allowAddSubmissionUsers.size(); i++) { User allowAddSubmissionUser = (User) allowAddSubmissionUsers.get(i); if (!allowAddAssignmentUsers.contains(allowAddSubmissionUser)) { members.add(allowAddSubmissionUser); } } } assignmentTypeVector.add(index, new Integer(a.getContent().getTypeOfGrade())); Iterator submissions = getSubmissions(a); List submissionList = new Vector(); while (submissions.hasNext()) { submissionList.add(submissions.next()); } assignmentSubmissionVector.add(index, submissionList); cell = row.createCell(cellNum++); cell.setCellStyle(style); cell.setCellValue(a.getTitle()); index++; } } } // is there a grade or not AssignmentSubmission submissionWithGrade = null; List submitterIds = null; String submitterId = ""; User member = null; for (Iterator it = members.iterator(); it.hasNext();) { // create one row for each user row = sheet.createRow(rowNum++); cellNum = 0; member = (User) it.next(); // show user's enterprise id row.createCell(cellNum++).setCellValue(member.getDisplayId()); // show user's name row.createCell(cellNum++).setCellValue(member.getSortName()); for (int i = 0; i < assignmentSubmissionVector.size(); i++) { // type for this assignment int assignmentType = ((Integer) assignmentTypeVector.get(i)).intValue(); // submission for this assignment List submissions = (List) (assignmentSubmissionVector.get(i)); // initialize it for every assignment submissionWithGrade = null; for (int k = 0; k < submissions.size() && submissionWithGrade == null; k++) { AssignmentSubmission s = (AssignmentSubmission) submissions.get(k); submitterIds = (List) s.getSubmitterIds(); for (int submitterIndex = 0; submitterIndex < submitterIds.size(); submitterIndex++) { submitterId = (String) submitterIds.get(submitterIndex); if (submitterId.equals(member.getId())) { // found the member's submission to the assignment // show user's grade if ((s != null) && (s.getGraded()) && (s.getGradeReleased())) { submissionWithGrade = s; } } // if } // for } // for if (submissionWithGrade != null) { if (assignmentType == 3) { try { // numeric cell type? 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_log.debug(" communityChanged is called for agent : "+_agent +" in GetCommunityWithUpdates CommunityChangeListener" + this); | _log.debug(" communityChanged is called for agent : " +_agent +" in GetCommunityWithUpdates CommunityChangeListener" + this); | public void communityChanged(CommunityChangeEvent event) { if (_log.isDebugEnabled()) { _log.debug(" communityChanged is called for agent : "+_agent +" in GetCommunityWithUpdates CommunityChangeListener" + this); if(_containsRole){ _log.debug(" where community Type( "+_communityType+" ) and role is ( "+_role+ " )"); } else { _log.debug(" where community Type( "+_communityType+" ) and role is NOT ( "+_role+ " )"); } } if (event.getType() != event.ADD_COMMUNITY && event.getType() != event.ENTITY_ATTRIBUTES_CHANGED && event.getType() != event.COMMUNITY_ATTRIBUTES_CHANGED && event.getType() != event.ADD_ENTITY) { return; // not a change we care about } Community community = event.getCommunity(); if (!isCommunityType(community, _communityType)) { if (_log.isDebugEnabled()) { _log.debug("Agent "+ _agent+ " "+community.getName() + " is not of type " + _communityType); } return; } if (_log.isDebugEnabled()) { _log.debug(" Change Info for Agent "+ _agent+ " GetCommunityWithUpdates community change: " + event.getChangeTypeAsString(event.getType()) + ", " + event.getWhatChanged()); } printCommunityInfo(community); if (hasRole(community, _role, _containsRole)) { // found it! if (_log.isDebugEnabled()) { _log.debug(" Setting response for agent : "+_agent +" in GetCommunityWithUpdates CommunityChangeListener "); if(_containsRole){ _log.debug(" where community Type( "+_communityType+" ) and role is ( "+_role+ " )"); } else { _log.debug(" where community Type( "+_communityType+" ) and role is NOT ( "+_role+ " )"); } _log.debug(" Response in is : "+ community); } _listener.getResponse(Collections.singleton(community)); return; } if (_log.isDebugEnabled()) { _log.debug(_agent + " does not have role (" + _role + ") in community (" + community.getName() + ")"); _log.debug(" Waiting for response for agent : "+_agent +" in GetCommunityWithUpdates CommunityChangeListener "); } } | 12869 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12869/4312e97b03e9c55f50f74e64b61ef7cc015ed06d/CommunityServiceUtil.java/buggy/securityservices/src/org/cougaar/core/security/util/CommunityServiceUtil.java | [
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if (myEditor != null && myEntity != null) { EOModel model = myEditor.getModel(); if (model != null) { EORelationship newRelationship = myEntity.addBlankRelationship(Messages.getString("EORelationship.newName")); myEditor.setSelection(new StructuredSelection(newRelationship)); } | if (myEntity != null) { EORelationship newRelationship = myEntity.addBlankRelationship(Messages.getString("EORelationship.newName")); } else { MessageDialog.openError(myWindow.getShell(), Messages.getString("EORelationship.noEntitySelectedTitle"), Messages.getString("EORelationship.noEntitySelectedMessage")); | public void run(IAction _action) { try { if (myEditor != null && myEntity != null) { EOModel model = myEditor.getModel(); if (model != null) { EORelationship newRelationship = myEntity.addBlankRelationship(Messages.getString("EORelationship.newName")); //$NON-NLS-1$ myEditor.setSelection(new StructuredSelection(newRelationship)); } } } catch (DuplicateRelationshipNameException e) { // TODO Auto-generated catch block e.printStackTrace(); } } | 46678 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46678/d928b49aa0253c6ecb4869ae5c835c8362ad2cc8/NewRelationshipAction.java/buggy/wolips/plugins/org.objectstyle.wolips.eomodeler/java/org/objectstyle/wolips/eomodeler/actions/NewRelationshipAction.java | [
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temp.addLine("setTreeBlockSource ", treeListSource); return temp; | temp.addLine("setTreeSource ", treeSource); temp.addLine("setConsenser ", consenser); return temp; | public Snapshot getSnapshot(MesquiteFile file) { Snapshot temp = new Snapshot(); temp.addLine("setTreeBlockSource ", treeListSource); return temp; } | 56479 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56479/3ca32c7abbc9ad3515a795bfc3fbb6b8044fab89/ConsensusTree.java/clean/Source/mesquite/treefarm/ConsensusTree/ConsensusTree.java | [
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indent2 = " "; | indent2 = indent + " "; | public void generateCode(PrintStream source, int guardIndex, int guardCount, String context, String mapName, String stateName, String indent) throws ParseException { ListIterator actionIt; SmcAction action; String indent2 = null; String endStateName = ""; // If this guard's end state is not of the form // "map::state", then prepend the map name to the // state name. // DON'T DO THIS IF THIS IS A POP TRANSITION! // The "state is actually a transition name. if (_trans_type != Smc.TRANS_POP && _end_state.length () > 0 && _end_state.compareTo("nil") != 0 && _end_state.indexOf("::") < 0) { _end_state = mapName + "::" + _end_state; } if (stateName.indexOf("::") < 0) { stateName = mapName + "::" + stateName; } // The guard code generation is a bit tricky. The first // question is how many guards are there? If there are // more than one, then we will need to generate the // proper "if-then-else" code. if (guardCount > 1) { // Ok, there are multiple guard statements. Now is // this the first guard among many? if (guardIndex == 0 && _condition != null) { // Yes, this is the first. This means an "if" // should be used for this condition. source.print(" if {["); _condition.generateCode(source, context, ""); source.println("]} {"); } else if (_condition != null) { // No, this is not the first transition but it // does have a condition. Use an "else if" for // the condition. source.print(" elseif {["); _condition.generateCode(source, context, ""); source.println("]} {"); } else { // This is not the first transition and it has // no condition. source.println(" else {"); } indent2 = " "; } else { // There is only one guard. Does this guard have a // condition. if (_condition == null) { // Actually, this is a plain, old, vaniila // transition. indent2 = " "; } else { indent2 = " "; // Yes, there is a condition. source.print(" if ("); _condition.generateCode(source, context, ""); source.println(") {"); } } // Perform the current state's exit action. // v. 1.0, beta 3: Not any more. The exit actions are // executed only if 1) this is a standard, non-loopback // transition or a pop transition. if ((_trans_type == Smc.TRANS_SET && _end_state.compareTo("nil") != 0 && _end_state.compareTo(stateName) != 0) || _trans_type == Smc.TRANS_POP) { source.println(indent2 + "[$context getState] Exit $context;"); } // Now that the necessary conditions are in place, it's // time to dump out the transitions actions. First, do // the proper handling of the state change. If this // transition has no actions, then set the end state // immediately. Otherwise, unset the current state so // that if an action tries to issue a transition, it will // fail. if (_actions.size() == 0 && _end_state.length() != 0) { endStateName = "${" + _end_state + "}"; } else if (_actions.size() > 0) { // Save away the current state if this is a loopback // transition. Storing current state allows the // current to be cleared before any actions are // executed. Remember: actions are not allowed to // issue transitions and clearing the current state // prevents them from doing so. if (_trans_type == Smc.TRANS_SET && (_end_state.compareTo("nil") == 0 || _end_state.compareTo(stateName) == 0)) { endStateName = "${EndStateName}"; source.println(indent2 + "set EndStateName [$context getState];"); } else if (_trans_type == Smc.TRANS_PUSH) { // If this is a push transition, then remember // the current state as well. This will have to // be reset before the push is done otherwise the // push will not work because it won't know what // state to put on the stack. if (_end_state.compareTo("nil") == 0) { endStateName = _end_state; } else { endStateName = "${" + _end_state + "}"; } source.println(indent2 + "set CurrentState [$context getState];"); } else { endStateName = "${" + _end_state + "}"; } // Now that we are in the transition, clear the // current state since we are no longer in a state. source.println(indent2 + "$context clearState;"); } // Dump out this transition's actions. for (actionIt = _actions.listIterator(); actionIt.hasNext() == true; ) { action = (SmcAction) actionIt.next(); action.generateCode(source, context, indent2); source.println(";"); } // Print the setState() call, if necessary. Do NOT // generate the set state if: // 1. The transition has no actions AND is a loopback OR // 2. This is a push or pop transition. if (_trans_type == Smc.TRANS_SET && (_actions.size() > 0 || (_end_state.compareTo("nil") != 0 && _end_state.compareTo(stateName) != 0))) { source.println(indent2 + "$context setState " + endStateName + ";"); } else if (_trans_type == Smc.TRANS_PUSH) { // Reset the current state so that it can be pushed // onto the state stack. But only do so if a clear // state was done. if (_actions.size() > 0) { source.println(indent2 + "$context setState $CurrentState;"); } // If pushing to the "nil" state, then use the // current state. if (endStateName.compareTo("nil") == 0) { source.println(indent2 + "$context pushState $CurrentState;"); } else { source.println(indent2 + "$context pushState " + endStateName + ";"); } } else if (_trans_type == Smc.TRANS_POP) { source.println(indent2 + "$context popState;"); } // Perform the new state's entry actions. // v. 1.0, beta 3: Not any more. The entry actions are // executed only if 1) this is a standard, non-loopback // transition or a push transition. if ((_trans_type == Smc.TRANS_SET && _end_state.compareTo("nil") != 0 && _end_state.compareTo(stateName) != 0) || _trans_type == Smc.TRANS_PUSH) { source.println(indent2 + "[$context getState] Entry $context;"); } // If there is a transition associated with the pop, then // issue that transition here. if (_trans_type == Smc.TRANS_POP && _end_state.compareTo("nil") != 0 && _end_state.length() > 0) { source.println(indent2 + "[$context getState] " + _end_state + " $context;"); } // If this is a guarded transition, it will be necessary // to close off the if body. DON'T PRINT A NEW LINE. Why? // Because an else or elseif may follow and we won't know // until we go back to the transition source generator // whether all clauses have been done. if (guardCount > 1) { source.print(" }"); } return; } | 50995 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50995/ffbfa44caa39de8d579429432aa3aca8bd077721/SmcGuardTcl.java/buggy/net/sf/smc/SmcGuardTcl.java | [
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final DataSetTab datasetTab = new DataSetTab(this.martTab, dataset); | final DataSetDiagram datasetDiagram = new DataSetDiagram(this.martTab, dataset); | private void addDataSetTab(final DataSet dataset) { // Create a tab for the dataset. final DataSetTab datasetTab = new DataSetTab(this.martTab, dataset); // Add the tab, and remember the mapping between dataset and tab. this.addTab(dataset.getName(), datasetTab); this.datasetToTab[0].add(dataset); this.datasetToTab[1].add(datasetTab); // Update the overview diagram. this.recalculateOverviewDiagram(); // Fake a click on the new tab. this.setSelectedIndex(this.indexOfComponent(datasetTab)); this.martTab.selectDataSetEditor(); } | 2000 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2000/c76d481210454f27e1173655b5a81de5e759e689/DataSetTabSet.java/clean/src/java/org/biomart/builder/view/gui/DataSetTabSet.java | [
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log().debug("poll: SNMPwalk poll succeeded, addr=" + ipaddr.getHostAddress() + " oid=" + snmpLogObjectId + " instance=" + e.getKey() + " value=" + e.getValue()); | log().debug("poll: SNMPwalk poll succeeded, addr=" + ipaddr.getHostAddress() + " oid=" + snmpLogObjectId + " instance=" + e.getKey() + " value=" + e.getValue()); | public PollStatus poll(MonitoredService svc, Map parameters, org.opennms.netmgt.config.poller.Package pkg) { NetworkInterface iface = svc.getNetInterface(); PollStatus status = PollStatus.unavailable(); InetAddress ipaddr = (InetAddress) iface.getAddress(); // Retrieve this interface's SNMP peer object // SnmpAgentConfig agentConfig = (SnmpAgentConfig) iface.getAttribute(SNMP_AGENTCONFIG_KEY); if (agentConfig == null) throw new RuntimeException("SnmpAgentConfig object not available for interface " + ipaddr); // Get configuration parameters // int timeout = ParameterMap.getKeyedInteger(parameters, "timeout", agentConfig.getTimeout()); int retries = ParameterMap.getKeyedInteger(parameters, "retries", agentConfig.getRetries()); int port = ParameterMap.getKeyedInteger(parameters, "port", DEFAULT_PORT); // set timeout and retries on SNMP peer object // agentConfig.setTimeout(timeout); agentConfig.setRetries(retries); agentConfig.setPort(port); if (log().isDebugEnabled()) log().debug("poll: service= SNMP address= " + agentConfig); // Establish SNMP session with interface // try { if (log().isDebugEnabled()) { log().debug("PercMonitor.poll: SnmpAgentConfig address: " +agentConfig); } SnmpObjId snmpObjectId = new SnmpObjId(PHYSICAL_BASE_OID); // First walk the physical OID Tree and check the returned values Map<SnmpInstId, SnmpValue> results = SnmpUtils.getOidValues(agentConfig, "percPoller", snmpObjectId); if(results.size() == 0) { log().debug("SNMP poll failed: no results, addr=" + ipaddr.getHostAddress() + " oid=" + snmpObjectId); return status; } for (Map.Entry<SnmpInstId, SnmpValue> e : results.entrySet()) { log().debug("poll: SNMPwalk poll succeeded, addr=" + ipaddr.getHostAddress() + " oid=" + snmpObjectId + " instance=" + e.getKey() + " value=" + e.getValue()); // Test each value returned to make sure it doesn't equal 4 // 1=>'ready', // 3=>'online', // 4=>'failed', // 5=>'rebuild', // 6=>'hotspare', // 20=>'nondisk' if (meetsCriteria(e.getValue(), "!=", "4")) { status = PollStatus.available(); } else { status = logDown(Level.DEBUG, "SNMP physical poll failed, addr=" + ipaddr.getHostAddress() + " oid=" + snmpObjectId + " instance=" + e.getKey() + " value=" + e.getValue()); return status; } } // If we get here, that means all of the physical drives returned a value not equal to "4" // Now we need to check logical drives SnmpObjId snmpLogObjectId = new SnmpObjId(LOGICAL_BASE_OID); // Next walk the physical OID Tree and check the returned values Map<SnmpInstId, SnmpValue> lresults = SnmpUtils.getOidValues(agentConfig, "percPoller", snmpLogObjectId); if(lresults.size() == 0) { log().debug("SNMP poll failed: no logical results, addr=" + ipaddr.getHostAddress() + " oid=" + snmpLogObjectId); return status; } for (Map.Entry<SnmpInstId, SnmpValue> e : lresults.entrySet()) { log().debug("poll: SNMPwalk poll succeeded, addr=" + ipaddr.getHostAddress() + " oid=" + snmpLogObjectId + " instance=" + e.getKey() + " value=" + e.getValue()); // Test each value returned to make sure it equals 2 // 0=>'offline', // 1=>'degraded', // 2=>'optimal', // 3=>'initialize', // 4=>'checkconsistency' if (meetsCriteria(e.getValue(), "=", "2")) { status = PollStatus.available(); } else { status = logDown(Level.DEBUG, "SNMP physical poll failed, addr=" + ipaddr.getHostAddress() + " oid=" + snmpLogObjectId + " instance=" + e.getKey() + " value=" + e.getValue()); return status; } } } catch (NumberFormatException e) { status = logDown(Level.ERROR, "Number operator used on a non-number " + e.getMessage()); } catch (IllegalArgumentException e) { status = logDown(Level.ERROR, "Invalid Snmp Criteria: " + e.getMessage()); } catch (Throwable t) { status = logDown(Level.WARN, "Unexpected exception during SNMP poll of interface " + ipaddr.getHostAddress(), t); } return status; } | 47678 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47678/197dbe646ed332296ce0438e4180826282aabffb/PercMonitor.java/clean/opennms-services/src/main/java/org/opennms/netmgt/poller/monitors/PercMonitor.java | [
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super(position); | super(position, NodeTypes.COLON2NODE); | public Colon2Node(ISourcePosition position, Node leftNode, String name) { super(position); this.leftNode = leftNode; this.name = name.intern(); } | 45827 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45827/6e15491217631472c05c6928672f9c7064a978b3/Colon2Node.java/buggy/src/org/jruby/ast/Colon2Node.java | [
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pg_stream = new PG_Stream(host, port); | pg_stream = new PG_Stream(host, port); | protected void openConnection(String host, int port, Properties info, String database, String url, Driver d) throws SQLException { // Throw an exception if the user or password properties are missing // This occasionally occurs when the client uses the properties version // of getConnection(), and is a common question on the email lists if(info.getProperty("user")==null) throw new PSQLException("postgresql.con.user"); if(info.getProperty("password")==null) throw new PSQLException("postgresql.con.pass"); this_driver = d; this_url = url; PG_DATABASE = database; PG_PASSWORD = info.getProperty("password"); PG_USER = info.getProperty("user"); PG_PORT = port; PG_HOST = host; PG_STATUS = CONNECTION_BAD; if(info.getProperty("compatible")==null) { compatible = d.getMajorVersion() + "." + d.getMinorVersion(); } else { compatible = info.getProperty("compatible"); } // Now make the initial connection try { pg_stream = new PG_Stream(host, port); } catch (ConnectException cex) { // Added by Peter Mount <peter@retep.org.uk> // ConnectException is thrown when the connection cannot be made. // we trap this an return a more meaningful message for the end user throw new PSQLException ("postgresql.con.refused"); } catch (IOException e) { throw new PSQLException ("postgresql.con.failed",e); } // Now we need to construct and send a startup packet try { // Ver 6.3 code pg_stream.SendInteger(4+4+SM_DATABASE+SM_USER+SM_OPTIONS+SM_UNUSED+SM_TTY,4); pg_stream.SendInteger(PG_PROTOCOL_LATEST_MAJOR,2); pg_stream.SendInteger(PG_PROTOCOL_LATEST_MINOR,2); pg_stream.Send(database.getBytes(),SM_DATABASE); // This last send includes the unused fields pg_stream.Send(PG_USER.getBytes(),SM_USER+SM_OPTIONS+SM_UNUSED+SM_TTY); // now flush the startup packets to the backend pg_stream.flush(); // Now get the response from the backend, either an error message // or an authentication request int areq = -1; // must have a value here do { int beresp = pg_stream.ReceiveChar(); switch(beresp) { case 'E': // An error occured, so pass the error message to the // user. // // The most common one to be thrown here is: // "User authentication failed" // throw new SQLException(pg_stream.ReceiveString(encoding)); case 'R': // Get the type of request areq = pg_stream.ReceiveIntegerR(4); // Get the password salt if there is one if(areq == AUTH_REQ_CRYPT) { byte[] rst = new byte[2]; rst[0] = (byte)pg_stream.ReceiveChar(); rst[1] = (byte)pg_stream.ReceiveChar(); salt = new String(rst,0,2); DriverManager.println("Salt="+salt); } // now send the auth packet switch(areq) { case AUTH_REQ_OK: break; case AUTH_REQ_KRB4: DriverManager.println("postgresql: KRB4"); throw new PSQLException("postgresql.con.kerb4"); case AUTH_REQ_KRB5: DriverManager.println("postgresql: KRB5"); throw new PSQLException("postgresql.con.kerb5"); case AUTH_REQ_PASSWORD: DriverManager.println("postgresql: PASSWORD"); pg_stream.SendInteger(5+PG_PASSWORD.length(),4); pg_stream.Send(PG_PASSWORD.getBytes()); pg_stream.SendInteger(0,1); pg_stream.flush(); break; case AUTH_REQ_CRYPT: DriverManager.println("postgresql: CRYPT"); String crypted = UnixCrypt.crypt(salt,PG_PASSWORD); pg_stream.SendInteger(5+crypted.length(),4); pg_stream.Send(crypted.getBytes()); pg_stream.SendInteger(0,1); pg_stream.flush(); break; default: throw new PSQLException("postgresql.con.auth",new Integer(areq)); } break; default: throw new PSQLException("postgresql.con.authfail"); } } while(areq != AUTH_REQ_OK); } catch (IOException e) { throw new PSQLException("postgresql.con.failed",e); } // As of protocol version 2.0, we should now receive the cancellation key and the pid int beresp = pg_stream.ReceiveChar(); switch(beresp) { case 'K': pid = pg_stream.ReceiveInteger(4); ckey = pg_stream.ReceiveInteger(4); break; case 'E': case 'N': throw new SQLException(pg_stream.ReceiveString(encoding)); default: throw new PSQLException("postgresql.con.setup"); } // Expect ReadyForQuery packet beresp = pg_stream.ReceiveChar(); switch(beresp) { case 'Z': break; case 'E': case 'N': throw new SQLException(pg_stream.ReceiveString(encoding)); default: throw new PSQLException("postgresql.con.setup"); } firstWarning = null; // "pg_encoding_to_char(1)" will return 'EUC_JP' for a backend compiled with multibyte, // otherwise it's hardcoded to 'SQL_ASCII'. // If the backend doesn't know about multibyte we can't assume anything about the encoding // used, so we denote this with 'UNKNOWN'. final String encodingQuery = "case when pg_encoding_to_char(1) = 'SQL_ASCII' then 'UNKNOWN' else getdatabaseencoding() end"; // Set datestyle and fetch db encoding in a single call, to avoid making // more than one round trip to the backend during connection startup. java.sql.ResultSet resultSet = ExecSQL("set datestyle to 'ISO'; select version(), " + encodingQuery + ";"); if (! 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String [] fullArgs = new String[args.length+3]; | String [] fullArgs = new String[args.length+2]; | private void go(String dbName, String [] args) { jdbcProtocol = "jdbc:derby:"; String sourceDBUrl = jdbcProtocol + dbPath + separator + dbName; String [] fullArgs = new String[args.length+3]; fullArgs[0] = "-d"; fullArgs[1] = sourceDBUrl; fullArgs[2] = "-append"; for (int i = 3; i < fullArgs.length; i++) fullArgs[i] = args[i-3]; dblook looker = new dblook(fullArgs); try { looker.go(sourceDBUrl, dbPath + separator + dbName); } catch (Exception e) { System.out.println("FAILED: "); e.printStackTrace(); } } | 56322 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56322/97cb351eeb1641673e8e0dd5e31915a06ec2e076/dblook_test.java/clean/java/testing/org/apache/derbyTesting/functionTests/tests/tools/dblook_test.java | [
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public CType getOutputType() { // first look for a non-null type (since some of them might // not be feeding into the joiner) for (int i=0; i<size(); i++) { CType type = get(i).getOutputType(); if (type!=CStdType.Null) { return type; } } // otherwise, they're all null, so return null return CStdType.Null; } | 5955 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5955/100b350b53809dd2a3ca44ed26f9f451a5c8b1be/SIRSplitJoin.java/buggy/streams/src/at/dms/kjc/sir/SIRSplitJoin.java | [
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return jjMoveStringLiteralDfa3_0(active0, 0x10000L); | return jjMoveStringLiteralDfa3_0(active0, 0x80000L); | private final int jjMoveStringLiteralDfa2_0(long old0, long active0){ if (((active0 &= old0)) == 0L) return jjStartNfa_0(0, old0); try { curChar = input_stream.readChar(); } catch(java.io.IOException e) { jjStopStringLiteralDfa_0(1, active0); return 2; } switch(curChar) { case 58: if ((active0 & 0x2000L) != 0L) return jjStopAtPos(2, 13); else if ((active0 & 0x4000L) != 0L) return jjStopAtPos(2, 14); else if ((active0 & 0x8000L) != 0L) return jjStopAtPos(2, 15); else if ((active0 & 0x200000L) != 0L) return jjStopAtPos(2, 21); else if ((active0 & 0x1000000000L) != 0L) return jjStopAtPos(2, 36); break; case 65: case 97: return jjMoveStringLiteralDfa3_0(active0, 0x204000000L); case 66: case 98: return jjMoveStringLiteralDfa3_0(active0, 0x800L); case 69: case 101: return jjMoveStringLiteralDfa3_0(active0, 0x1000001000000L); case 70: case 102: return jjMoveStringLiteralDfa3_0(active0, 0x10000000L); case 71: case 103: return jjMoveStringLiteralDfa3_0(active0, 0x400000000L); case 73: case 105: return jjMoveStringLiteralDfa3_0(active0, 0x10000L); case 76: case 108: return jjMoveStringLiteralDfa3_0(active0, 0x40000L); case 77: case 109: return jjMoveStringLiteralDfa3_0(active0, 0x400000000000L); case 78: case 110: return jjMoveStringLiteralDfa3_0(active0, 0x7e002000400L); case 79: case 111: return jjMoveStringLiteralDfa3_0(active0, 0x1000L); case 80: case 112: return jjMoveStringLiteralDfa3_0(active0, 0x80000L); case 82: case 114: return jjMoveStringLiteralDfa3_0(active0, 0x6000000000000L); case 83: case 115: return jjMoveStringLiteralDfa3_0(active0, 0x800020000L); case 84: case 116: return jjMoveStringLiteralDfa3_0(active0, 0x980008500000L); case 89: case 121: return jjMoveStringLiteralDfa3_0(active0, 0x200000800000L); case 90: case 122: return jjMoveStringLiteralDfa3_0(active0, 0x20000000L); default : break; } return jjStartNfa_0(1, active0);} | 6965 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6965/310be8d52869f0ee2c185cb657525fc655f30133/ZimbraQueryParserTokenManager.java/buggy/ZimbraServer/src/java/com/zimbra/cs/index/queryparser/ZimbraQueryParserTokenManager.java | [
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return contentService.getViewerId(); | return contentService.toString() + " Viewer"; | public String toString() { return contentService.getViewerId(); } | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/c93d807ed962723d90daba76fc2003e2c1801cbc/CommonViewer.java/buggy/bundles/org.eclipse.ui.navigator/src/org/eclipse/ui/navigator/CommonViewer.java | [
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DataOutputBuffer d = new DataOutputBuffer(); d.writeInt(call.id); call.param.write(d); byte[] data = d.getData(); int dataLength = d.getLength(); out.writeInt(dataLength); out.write(data, 0, dataLength); | out.writeInt(call.id); call.param.write(out); | public void sendParam(Call call) throws IOException { boolean error = true; try { calls.put(new Integer(call.id), call); synchronized (out) { if (LOG.isDebugEnabled()) LOG.debug(getName() + " sending #" + call.id); try { writingCall = call; DataOutputBuffer d = new DataOutputBuffer(); //for serializing the //data to be written d.writeInt(call.id); call.param.write(d); byte[] data = d.getData(); int dataLength = d.getLength(); out.writeInt(dataLength); //first put the data length out.write(data, 0, dataLength);//write the data out.flush(); } finally { writingCall = null; } } error = false; } finally { if (error) close(); // close on error } } | 55137 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55137/c244f1709006c4db4d644eddce36174aa25c8cdd/Client.java/clean/src/java/org/apache/hadoop/ipc/Client.java | [
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logger.debug("Setting up: " + isotope); | private IsotopeFactory() throws IOException, OptionalDataException, ClassNotFoundException { logger = new org.openscience.cdk.tools.LoggingTool(this.getClass().getName()); InputStream ins = null; ObjIn in = null; String errorMessage = "There was a problem getting org.openscience.cdk." + "config.isotopes.xml as a stream"; try { ins = this.getClass().getClassLoader().getResourceAsStream("org/openscience/cdk/config/isotopes.xml"); } catch (Exception exc) { logger.error(errorMessage); throw new IOException(errorMessage); } if (ins == null) { logger.error(errorMessage); throw new IOException(errorMessage); } in = new ObjIn(ins, new Config().aliasID(false)); isotopes = (Vector) in.readObject(); for (int f = 0; f < isotopes.size(); f++) { Isotope isotope = (Isotope)isotopes.elementAt(f); // logger.debug("Setting up: " + isotope); setup(isotope); } majorIsotopes = new Hashtable(); } | 45254 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45254/048b23e4f555703bb4e35196ed935bce38e3c89f/IsotopeFactory.java/buggy/src/org/openscience/cdk/tools/IsotopeFactory.java | [
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rd.addNumericField("T_Begin" + s, tBegin[i] + 1, 0); rd.addNumericField("T_End" + s, tEnd[i] + 1, 0); rd.addNumericField("T_Step" + s, tStep[i], 0); | gd.addNumericField("T_Begin" + s, tBegin[i] + 1, 0); gd.addNumericField("T_End" + s, tEnd[i] + 1, 0); gd.addNumericField("T_Step" + s, tStep[i], 0); | public void run(String arg) { boolean quiet = arg != null && !arg.equals(""); String options = Macro.getOptions(); // -- Step 1: get filename to open -- String id = null; // try to get filename from argument if (quiet) id = arg; if (id == null) { // try to get filename from macro options if (options != null) { String open = Macro.getValue(options, "open", null); if (open != null) id = open; } } // if necessary, prompt the user for the filename OpenDialog od = new OpenDialog("Open", id); String directory = od.getDirectory(); String fileName = od.getFileName(); if (fileName == null) { plugin.canceled = true; return; } id = directory + fileName; // if no valid filename, give up if (id == null || !new File(id).exists()) { if (!quiet) { IJ.error("LOCI Bio-Formats", "The specified file " + (id == null ? "" : ("(" + id + ") ")) + "does not exist."); } return; } // -- Step 2: identify file -- IJ.showStatus("Identifying " + fileName); // determine whether we can handle this file ImageReader reader = new ImageReader(); IFormatReader r = null; try { r = reader.getReader(id); } catch (Exception exc) { exc.printStackTrace(); IJ.showStatus(""); if (!quiet) { String msg = exc.getMessage(); IJ.error("LOCI Bio-Formats", "Sorry, there was a problem " + "reading the file" + (msg == null ? "." : (":\n" + msg))); } return; } // -- Step 3: get parameter values -- IJ.showStatus(""); final String mergeString = "Merge channels to RGB"; final String ignoreString = "Ignore color lookup table"; final String colorizeString = "Colorize channels"; final String splitString = "Open each channel in its own window"; final String metadataString = "Display associated metadata"; final String stitchString = "Stitch files with similar names"; final String rangeString = "Specify range for each series"; final String stackString = "View stack with: "; Vector stackTypes = new Vector(); stackTypes.add(VIEW_STANDARD); if (Util.checkClass("loci.plugins.browser.LociDataBrowser")) { stackTypes.add(VIEW_BROWSER); } if (Util.checkClass("i5d.Image5D")) stackTypes.add(VIEW_IMAGE_5D); stackTypes.add(VIEW_VIEW_5D); final String[] stackFormats = new String[stackTypes.size()]; stackTypes.copyInto(stackFormats); // load preferences from IJ_Prefs.txt boolean mergeChannels = Prefs.get("bioformats.mergeChannels", false); boolean ignoreTables = Prefs.get("bioformats.ignoreTable", false); boolean colorize = Prefs.get("bioformats.colorize", false); boolean splitWindows = Prefs.get("bioformats.splitWindows", true); boolean showMetadata = Prefs.get("bioformats.showMetadata", false); boolean stitchFiles = Prefs.get("bioformats.stitchFiles", false); boolean specifyRanges = Prefs.get("bioformats.specifyRanges", false); stackFormat = Prefs.get("bioformats.stackFormat", VIEW_STANDARD); // prompt for parameters, if necessary GenericDialog pd = new GenericDialog("LOCI Bio-Formats Import Options"); pd.addCheckbox(mergeString, mergeChannels); pd.addCheckbox(ignoreString, ignoreTables); pd.addCheckbox(colorizeString, colorize); pd.addCheckbox(splitString, splitWindows); pd.addCheckbox(metadataString, showMetadata); pd.addCheckbox(stitchString, stitchFiles); pd.addCheckbox(rangeString, specifyRanges); pd.addChoice(stackString, stackFormats, stackFormats[0]); pd.showDialog(); if (pd.wasCanceled()) { plugin.canceled = true; return; } mergeChannels = pd.getNextBoolean(); ignoreTables = pd.getNextBoolean(); colorize = pd.getNextBoolean(); splitWindows = pd.getNextBoolean(); showMetadata = pd.getNextBoolean(); stitchFiles = pd.getNextBoolean(); specifyRanges = pd.getNextBoolean(); stackFormat = stackFormats[pd.getNextChoiceIndex()]; // -- Step 4: open file -- IJ.showStatus("Analyzing " + fileName); try { // -- Step 4a: do some preparatory work -- if (stitchFiles) r = new FileStitcher(r); if (mergeChannels) r = new ChannelMerger(r); else r = new ChannelSeparator(r); r.setColorTableIgnored(ignoreTables); // store OME metadata into OME-XML structure, if available OMEXMLMetadataStore store = new OMEXMLMetadataStore(); store.createRoot(); r.setMetadataStore(store); int seriesCount = r.getSeriesCount(id); boolean[] series = new boolean[seriesCount]; series[0] = true; // build descriptive string and range for each series String[] seriesStrings = new String[seriesCount]; int[] num = new int[seriesCount]; int[] sizeC = new int[seriesCount]; int[] sizeZ = new int[seriesCount]; int[] sizeT = new int[seriesCount]; boolean[] certain = new boolean[seriesCount]; int[] cBegin = new int[seriesCount]; int[] cEnd = new int[seriesCount]; int[] cStep = new int[seriesCount]; int[] zBegin = new int[seriesCount]; int[] zEnd = new int[seriesCount]; int[] zStep = new int[seriesCount]; int[] tBegin = new int[seriesCount]; int[] tEnd = new int[seriesCount]; int[] tStep = new int[seriesCount]; for (int i=0; i<seriesCount; i++) { r.setSeries(id, i); num[i] = r.getImageCount(id); sizeC[i] = r.getSizeC(id); if (r.isRGB(id)) sizeC[i] = sizeC[i] < 3 ? 1 : (sizeC[i] / 3); sizeZ[i] = r.getSizeZ(id); sizeT[i] = r.getSizeT(id); certain[i] = r.isOrderCertain(id); cBegin[i] = zBegin[i] = tBegin[i] = 0; if (certain[i]) { cEnd[i] = sizeC[i] - 1; zEnd[i] = sizeZ[i] - 1; tEnd[i] = sizeT[i] - 1; } else cEnd[i] = num[i] - 1; cStep[i] = zStep[i] = tStep[i] = 1; StringBuffer sb = new StringBuffer(); sb.append("Series_"); sb.append(i + 1); sb.append(" - "); String name = store.getImageName(new Integer(i)); if (name != null && name.length() > 0) { sb.append(name); sb.append(": "); } sb.append(r.getSizeX(id)); sb.append(" x "); sb.append(r.getSizeY(id)); sb.append("; "); sb.append(num[i]); sb.append(" planes"); if (certain[i]) { sb.append(" ("); boolean first = true; if (sizeC[i] > 1) { sb.append(sizeC[i]); sb.append("C"); first = false; } if (sizeZ[i] > 1) { if (!first) sb.append(" x "); sb.append(sizeZ[i]); sb.append("Z"); first = false; } if (sizeT[i] > 1) { if (!first) sb.append(" x "); sb.append(sizeT[i]); sb.append("T"); first = false; } sb.append(")"); } seriesStrings[i] = sb.toString(); } // -- Step 4a: prompt for the series to open, if necessary -- if (seriesCount > 1) { IJ.showStatus(""); GenericDialog sd = new GenericDialog("LOCI Bio-Formats Series Options"); for (int i=0; i<seriesCount; i++) { sd.addCheckbox(seriesStrings[i], series[i]); } addScrollBars(sd); sd.showDialog(); if (sd.wasCanceled()) { plugin.canceled = true; return; } for (int i=0; i<seriesCount; i++) series[i] = sd.getNextBoolean(); } // -- Step 4b: prompt for the range of planes to import, if necessary -- if (specifyRanges) { boolean needRange = false; for (int i=0; i<seriesCount; i++) { if (series[i] && num[i] > 1) needRange = true; } if (needRange) { IJ.showStatus(""); GenericDialog rd = new GenericDialog("LOCI Bio-Formats Range Options"); for (int i=0; i<seriesCount; i++) { if (!series[i]) continue; rd.addMessage(seriesStrings[i].replaceAll("_", " ")); String s = "_" + (i + 1); if (certain[i]) { if (sizeC[i] > 1) { rd.addNumericField("C_Begin" + s, cBegin[i] + 1, 0); rd.addNumericField("C_End" + s, cEnd[i] + 1, 0); rd.addNumericField("C_Step" + s, cStep[i], 0); } if (sizeZ[i] > 1) { rd.addNumericField("Z_Begin" + s, zBegin[i] + 1, 0); rd.addNumericField("Z_End" + s, zEnd[i] + 1, 0); rd.addNumericField("Z_Step" + s, zStep[i], 0); } if (sizeT[i] > 1) { rd.addNumericField("T_Begin" + s, tBegin[i] + 1, 0); rd.addNumericField("T_End" + s, tEnd[i] + 1, 0); rd.addNumericField("T_Step" + s, tStep[i], 0); } } else { rd.addNumericField("Begin" + s, cBegin[i] + 1, 0); rd.addNumericField("End" + s, cEnd[i] + 1, 0); rd.addNumericField("Step" + s, cStep[i], 0); } } addScrollBars(rd); rd.showDialog(); if (rd.wasCanceled()) { plugin.canceled = true; return; } for (int i=0; i<seriesCount; i++) { if (!series[i]) continue; if (certain[i]) { if (sizeC[i] > 1) { cBegin[i] = (int) rd.getNextNumber() - 1; cEnd[i] = (int) rd.getNextNumber() - 1; cStep[i] = (int) rd.getNextNumber(); } if (sizeZ[i] > 1) { zBegin[i] = (int) rd.getNextNumber() - 1; zEnd[i] = (int) rd.getNextNumber() - 1; zStep[i] = (int) rd.getNextNumber(); } if (sizeT[i] > 1) { tBegin[i] = (int) rd.getNextNumber() - 1; tEnd[i] = (int) rd.getNextNumber() - 1; tStep[i] = (int) rd.getNextNumber(); } } else { cBegin[i] = (int) rd.getNextNumber() - 1; cEnd[i] = (int) rd.getNextNumber() - 1; cStep[i] = (int) rd.getNextNumber(); } int maxC = certain[i] ? sizeC[i] : num[i]; if (cBegin[i] < 0) cBegin[i] = 0; if (cBegin[i] >= maxC) cBegin[i] = maxC - 1; if (cEnd[i] < cBegin[i]) cEnd[i] = cBegin[i]; if (cEnd[i] >= maxC) cEnd[i] = maxC - 1; if (cStep[i] < 1) cStep[i] = 1; if (zBegin[i] < 0) zBegin[i] = 0; if (zBegin[i] >= sizeZ[i]) zBegin[i] = sizeZ[i] - 1; if (zEnd[i] < zBegin[i]) zEnd[i] = zBegin[i]; if (zEnd[i] >= sizeZ[i]) zEnd[i] = sizeZ[i] - 1; if (zStep[i] < 1) zStep[i] = 1; if (tBegin[i] < 0) tBegin[i] = 0; if (tBegin[i] >= sizeT[i]) tBegin[i] = sizeT[i] - 1; if (tEnd[i] < tBegin[i]) tEnd[i] = tBegin[i]; if (tEnd[i] >= sizeT[i]) tEnd[i] = sizeT[i] - 1; if (tStep[i] < 1) tStep[i] = 1; } } } // -- Step 4c: display metadata, when appropriate -- if (showMetadata) { IJ.showStatus("Populating metadata"); // display standard metadata in a table in its own window Hashtable meta = r.getMetadata(id); meta.put("\tSizeX", new Integer(r.getSizeX(id))); meta.put("\tSizeY", new Integer(r.getSizeY(id))); meta.put("\tSizeZ", new Integer(r.getSizeZ(id))); meta.put("\tSizeT", new Integer(r.getSizeT(id))); meta.put("\tSizeC", new Integer(r.getSizeC(id))); meta.put("\tIsRGB", new Boolean(r.isRGB(id))); meta.put("\tPixelType", FormatReader.getPixelTypeString(r.getPixelType(id))); meta.put("\tLittleEndian", new Boolean(r.isLittleEndian(id))); meta.put("\tDimensionOrder", r.getDimensionOrder(id)); meta.put("\tIsInterleaved", new Boolean(r.isInterleaved(id))); MetadataPane mp = new MetadataPane(meta); JFrame frame = new JFrame(id + " Metadata"); frame.setContentPane(mp); frame.pack(); frame.setVisible(true); frame.setDefaultCloseOperation(JFrame.DISPOSE_ON_CLOSE); WindowManager.addWindow(frame); } // -- Step 4d: read pixel data -- IJ.showStatus("Reading " + fileName); for (int i=0; i<seriesCount; i++) { if (!series[i]) continue; r.setSeries(id, i); String name = store.getImageName(new Integer(i)); String imageName = fileName; if (name != null && name.length() > 0) imageName += " - " + name; boolean[] load = new boolean[num[i]]; if (certain[i]) { for (int c=cBegin[i]; c<=cEnd[i]; c+=cStep[i]) { for (int z=zBegin[i]; z<=zEnd[i]; z+=zStep[i]) { for (int t=tBegin[i]; t<=tEnd[i]; t+=tStep[i]) { int index = r.getIndex(id, z, c, t); load[index] = true; } } } } else { for (int j=cBegin[i]; j<=cEnd[i]; j+=cStep[i]) load[j] = true; } int total = 0; for (int j=0; j<num[i]; j++) if (load[j]) total++; // dump OME-XML to ImageJ's description field, if available FileInfo fi = new FileInfo(); fi.description = store.dumpXML(); long startTime = System.currentTimeMillis(); long time = startTime; ImageStack stackB = null, stackS = null, stackF = null, stackO = null; int q = 0; for (int j=0; j<num[i]; j++) { if (!load[j]) continue; // limit message update rate long clock = System.currentTimeMillis(); if (clock - time >= 100) { IJ.showStatus("Reading " + (seriesCount > 1 ? ("series " + (i + 1) + ", ") : "") + "plane " + (j + 1) + "/" + num[i]); time = clock; } IJ.showProgress((double) q++ / total); byte[] b = r.openBytes(id, j); int w = r.getSizeX(id); int h = r.getSizeY(id); int c = r.isRGB(id) ? r.getSizeC(id) : 1; int type = r.getPixelType(id); // construct image processor and add to stack ImageProcessor ip = null; int bpp = 0; switch (type) { case FormatReader.INT8: case FormatReader.UINT8: bpp = 1; break; case FormatReader.INT16: case FormatReader.UINT16: bpp = 2; break; case FormatReader.INT32: case FormatReader.UINT32: case FormatReader.FLOAT: bpp = 4; break; case FormatReader.DOUBLE: bpp = 8; break; } if (b.length != w * h * c * bpp) { // HACK - byte array dimensions are incorrect - image is probably // a different size, but we have no way of knowing what size; // so open this plane as a BufferedImage instead BufferedImage bi = r.openImage(id, j); b = ImageTools.padImage(b, r.isInterleaved(id), c, bi.getWidth() * bpp, w, h); } Object pixels = DataTools.makeDataArray(b, bpp, type == FormatReader.FLOAT || type == FormatReader.DOUBLE, r.isLittleEndian(id)); if (pixels instanceof byte[]) { byte[] bytes = (byte[]) pixels; if (bytes.length > w*h*c) { byte[] tmp = bytes; bytes = new byte[w*h*c]; System.arraycopy(tmp, 0, bytes, 0, bytes.length); } if (c == 1) { ip = new ByteProcessor(w, h, bytes, null); if (stackB == null) stackB = new ImageStack(w, h); stackB.addSlice(imageName + ":" + (j + 1), ip); } else { if (stackO == null) stackO = new ImageStack(w, h); ip = new ColorProcessor(w, h); byte[][] pix = new byte[c][w*h]; for (int k=0; k<c; k++) { System.arraycopy(bytes, k*pix[k].length, pix[k], 0, pix[k].length); } ((ColorProcessor) ip).setRGB(pix[0], pix[1], pix.length >= 3 ? pix[2] : new byte[w*h]); stackO.addSlice(imageName + ":" + (j + 1), ip); } } else if (pixels instanceof short[]) { short[] s = (short[]) pixels; if (s.length > w*h*c) { short[] tmp = s; s = new short[w*h*c]; System.arraycopy(tmp, 0, s, 0, s.length); } if (c == 1) { ip = new ShortProcessor(w, h, s, null); if (stackS == null) stackS = new ImageStack(w, h); stackS.addSlice(imageName + ":" + (j + 1), ip); } else { if (stackO == null) stackO = new ImageStack(w, h); short[][] pix = new short[c][w*h]; for (int k=0; k<c; k++) { System.arraycopy(s, k*pix[k].length, pix[k], 0, pix[k].length); } byte[][] bytes = new byte[c][w*h]; for (int k=0; k<c; k++) { ip = new ShortProcessor(w, h, pix[k], null); ip = ip.convertToByte(true); bytes[k] = (byte[]) ip.getPixels(); } ip = new ColorProcessor(w, h); ((ColorProcessor) ip).setRGB(bytes[0], bytes[1], pix.length >= 3 ? bytes[2] : new byte[w*h]); stackO.addSlice(imageName + ":" + (j + 1), ip); } } else if (pixels instanceof int[]) { int[] s = (int[]) pixels; if (s.length > w*h*c) { int[] tmp = s; s = new int[w*h*c]; System.arraycopy(tmp, 0, s, 0, s.length); } if (c == 1) { ip = new FloatProcessor(w, h, s); if (stackF == null) stackF = new ImageStack(w, h); stackF.addSlice(imageName + ":" + (j + 1), ip); } else { if (stackO == null) stackO = new ImageStack(w, h); int[][] pix = new int[c][w*h]; for (int k=0; k<c; k++) { System.arraycopy(s, k*pix[k].length, pix[k], 0, pix[k].length); } byte[][] bytes = new byte[c][w*h]; for (int k=0; k<c; k++) { ip = new FloatProcessor(w, h, pix[k]); ip = ip.convertToByte(true); bytes[k] = (byte[]) ip.getPixels(); } ip = new ColorProcessor(w, h); ((ColorProcessor) ip).setRGB(bytes[0], bytes[1], pix.length >= 3 ? bytes[2] : new byte[w*h]); stackO.addSlice(imageName + ":" + (j + 1), ip); } } else if (pixels instanceof float[]) { float[] f = (float[]) pixels; if (f.length > w*h*c) { float[] tmp = f; f = new float[w*h*c]; System.arraycopy(tmp, 0, f, 0, f.length); } if (c == 1) { ip = new FloatProcessor(w, h, f, null); if (stackF == null) stackF = new ImageStack(w, h); if (stackB != null) { ip = ip.convertToByte(true); stackB.addSlice(imageName + ":" + (j + 1), ip); stackF = null; } else if (stackS != null) { ip = ip.convertToShort(true); stackS.addSlice(imageName + ":" + (j + 1), ip); stackF = null; } else stackF.addSlice(imageName + ":" + (j + 1), ip); } else { if (stackO == null) stackO = new ImageStack(w, h); float[][] pix = new float[c][w*h]; if (!r.isInterleaved(id)) { for (int k=0; k<f.length; k+=c) { for (int l=0; l<c; l++) { pix[l][k / 3] = f[k + l]; } } } else { for (int k=0; k<c; k++) { System.arraycopy(f, k*pix[k].length, pix[k], 0, pix[k].length); } } byte[][] bytes = new byte[c][w*h]; for (int k=0; k<c; k++) { ip = new FloatProcessor(w, h, pix[k], null); ip = ip.convertToByte(true); bytes[k] = (byte[]) ip.getPixels(); } ip = new ColorProcessor(w, h); ((ColorProcessor) ip).setRGB(bytes[0], bytes[1], pix.length >= 3 ? bytes[2] : new byte[w*h]); stackO.addSlice(imageName + ":" + (j + 1), ip); } } else if (pixels instanceof double[]) { double[] d = (double[]) pixels; if (d.length > w*h*c) { double[] tmp = d; d = new double[w*h*c]; System.arraycopy(tmp, 0, d, 0, d.length); } if (c == 1) { ip = new FloatProcessor(w, h, d); if (stackF == null) stackF = new ImageStack(w, h); stackF.addSlice(imageName + ":" + (j + 1), ip); } else { if (stackO == null) stackO = new ImageStack(w, h); double[][] pix = new double[c][w*h]; for (int k=0; k<c; k++) { System.arraycopy(d, k*pix[k].length, pix[k], 0, pix[k].length); } byte[][] bytes = new byte[c][w*h]; for (int k=0; k<c; k++) { ip = new FloatProcessor(w, h, pix[k]); ip = ip.convertToByte(true); bytes[k] = (byte[]) ip.getPixels(); } ip = new ColorProcessor(w, h); ((ColorProcessor) ip).setRGB(bytes[0], bytes[1], pix.length >= 3 ? bytes[2] : new byte[w*h]); stackO.addSlice(imageName + ":" + (j + 1), ip); } } } IJ.showStatus("Creating image"); IJ.showProgress(1); ImagePlus imp = null; if (stackB != null) { if (!mergeChannels && splitWindows) { slice(stackB, id, sizeZ[i], sizeC[i], sizeT[i], fi, r, specifyRanges, colorize); } else imp = new ImagePlus(imageName, stackB); } if (stackS != null) { if (!mergeChannels && splitWindows) { slice(stackS, id, sizeZ[i], sizeC[i], sizeT[i], fi, r, specifyRanges, colorize); } else imp = new ImagePlus(imageName, stackS); } if (stackF != null) { if (!mergeChannels && splitWindows) { slice(stackF, id, sizeZ[i], sizeC[i], sizeT[i], fi, r, specifyRanges, colorize); } else imp = new ImagePlus(imageName, stackF); } if (stackO != null) { if (!mergeChannels && splitWindows) { slice(stackO, id, sizeZ[i], sizeC[i], sizeT[i], fi, r, specifyRanges, colorize); } else imp = new ImagePlus(imageName, stackO); } if (imp != null) { // retrieve the spatial calibration information, if available applyCalibration(store, imp, i); imp.setFileInfo(fi); int c = r.getSizeC(id); displayStack(imp, r, id); r.close(); } long endTime = System.currentTimeMillis(); double elapsed = (endTime - startTime) / 1000.0; if (num[i] == 1) { IJ.showStatus("LOCI Bio-Formats: " + elapsed + " seconds"); } else { long average = (endTime - startTime) / num[i]; IJ.showStatus("LOCI Bio-Formats: " + elapsed + " seconds (" + average + " ms per plane)"); } } r.close(); plugin.success = true; // save parameter values to IJ_Prefs.txt Prefs.set("bioformats.mergeChannels", mergeChannels); Prefs.set("bioformats.ignoreTables", ignoreTables); Prefs.set("bioformats.colorize", colorize); Prefs.set("bioformats.splitWindows", splitWindows); Prefs.set("bioformats.showMetadata", showMetadata); Prefs.set("bioformats.stitchFiles", stitchFiles); Prefs.set("bioformats.specifyRanges", specifyRanges); Prefs.set("bioformats.stackFormat", stackFormat); } catch (Exception exc) { exc.printStackTrace(); IJ.showStatus(""); if (!quiet) { String msg = exc.getMessage(); IJ.error("LOCI Bio-Formats", "Sorry, there was a problem " + "reading the data" + (msg == null ? 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}); | }, controlContext); | public Class forName(final String name) throws ClassNotFoundException { if (System.getSecurityManager() == null) return Class.forName(name); try { return (Class) AccessController.doPrivileged(new PrivilegedExceptionAction() { public Object run() throws Exception { return Class.forName(name); } }); } catch (PrivilegedActionException e) { if (e.getException() instanceof ClassNotFoundException) throw (ClassNotFoundException) e.getException(); throw (RuntimeException) e.getException(); } } | 2516 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2516/d8b7d1128beda2c0335c9f8794f4d982b456d0d0/SecureAction.java/buggy/bundles/org.eclipse.osgi/supplement/src/org/eclipse/osgi/framework/util/SecureAction.java | [
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return new Item(this,id, index, model); | return new Item(this, id, index, model); | protected Item newRowItem(final String id, int index, final IModel model) { return new Item(this,id, index, model); } | 46434 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46434/d2c2332d85a273f7cd33ec50b1f27d2b9b116d6b/DataTable.java/buggy/wicket-extensions/src/java/wicket/extensions/markup/html/repeater/data/table/DataTable.java | [
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first = 0; | public void onStartBinding(PlugletStreamInfo streamInfo) { bb = new byte[streamInfo.getLength()]; total = 0; first = 0; } | 51996 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51996/701adb53ebc028dc703c1074d472d19dec2ab46e/ZipView.java/buggy/java/plugins/examples/zip/ZipView.java | [
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ErrorAnalizer.analyzeErrors(module, formFile, null, rootContainer); | ErrorAnalyzer.analyzeErrors(module, formFile, null, rootContainer); | public void generate(final VirtualFile formFile) { final Module module = ModuleUtil.getModuleForFile(myProject, formFile); if (module == null) { return; } final PsiPropertiesProvider propertiesProvider = new PsiPropertiesProvider(module); final Document doc = FileDocumentManager.getInstance().getDocument(formFile); final LwRootContainer rootContainer; try { rootContainer = Utils.getRootContainer(doc.getText(), propertiesProvider); } catch (AlienFormFileException ignored) { // ignoring this file return; } catch (Exception e) { myErrors.add("Cannot process form file. Reason: " + e); return; } if (rootContainer.getClassToBind() == null) { // form skipped - no class to bind return; } ErrorAnalizer.analyzeErrors(module, formFile, null, rootContainer); FormEditingUtil.iterate( rootContainer, new FormEditingUtil.ComponentVisitor<LwComponent>() { public boolean visit(final LwComponent iComponent) { final ErrorInfo errorInfo = ErrorAnalizer.getErrorForComponent(iComponent); if (errorInfo != null){ myErrors.add(errorInfo.myDescription); } return true; } } ); if (myErrors.size() != 0) { return; } try { _generate(rootContainer, module); } catch (ClassToBindNotFoundException e) { // ignored return; } catch (CodeGenerationException e) { myErrors.add(e.getMessage()); } catch (IncorrectOperationException e) { myErrors.add(e.getMessage()); } } | 12814 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12814/390c9b70bb9263eb8204227bc0d47a53a6574b2f/FormSourceCodeGenerator.java/buggy/source/com/intellij/uiDesigner/make/FormSourceCodeGenerator.java | [
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s, m, indexMap, preserve, stripFirst, last && top); | s, m, indexMap, preserve, stripFirst, last && top); | protected List buildAttributedStrings(BridgeContext ctx, Element element, GraphicsNode node, boolean top, LinkedList result) { // !!! return two lists Map m = getAttributeMap(ctx, element, node); String s = XMLSupport.getXMLSpace(element); boolean preserve = s.equals("preserve"); boolean first = true; boolean last; boolean stripFirst = !preserve; boolean stripLast = !preserve; Element nodeElement = element; AttributedString as = null; if (!result.isEmpty()) { as = (AttributedString) result.getLast(); } for (Node n = element.getFirstChild(); n != null; n = n.getNextSibling()) { last = n.getNextSibling() == null; int lastChar = (as != null) ? (as.getIterator().last()) : CharacterIterator.DONE; stripFirst = !preserve && first && (top || (lastChar == ' ') || (lastChar == CharacterIterator.DONE)); switch (n.getNodeType()) { case Node.ELEMENT_NODE: nodeElement = (Element)n; if (n.getLocalName().equals("tspan")) { buildAttributedStrings(ctx, nodeElement, node, false, result); } else if (n.getLocalName().equals("tref")) { try { String uriStr = XLinkSupport.getXLinkHref((Element)n); SVGDocument svgDoc = (SVGDocument)element.getOwnerDocument(); URL baseURL = ((SVGOMDocument)svgDoc).getURLObject(); URL url = new URL(baseURL, uriStr); DocumentLoader loader = ctx.getDocumentLoader(); URIResolver resolver = new URIResolver(svgDoc, loader); Element ref = (Element)resolver.getNode(url.toString()); s = getElementContent(ref); Map map = getAttributeMap(ctx, nodeElement, node); int[] indexMap = new int[s.length()]; as = createAttributedString(s, map, indexMap, preserve, stripFirst, last && top); if (as != null) { addGlyphPositionAttributes( as, true, indexMap, ctx, nodeElement); stripLast = !preserve && (as.getIterator().first() == ' '); if (stripLast) { AttributedString las = (AttributedString) result.removeLast(); if (las != null) { AttributedCharacterIterator iter = las.getIterator(); int endIndex = iter.getEndIndex()-1; if (iter.setIndex(endIndex) == ' ') { las = new AttributedString( las.getIterator(null, iter.getBeginIndex(), endIndex)); } result.add(las); } } result.add(as); } } catch(MalformedURLException ex) { throw new IllegalAttributeValueException( Messages.formatMessage("tref.xlinkHref.badURL", null)); } catch (Exception ex) { /* Nothing to do */ } } break; case Node.TEXT_NODE: s = n.getNodeValue(); int[] indexMap = new int[s.length()]; as = createAttributedString( s, m, indexMap, preserve, stripFirst, last && top); if (as != null) { if (first) { addGlyphPositionAttributes(as, !top, indexMap, ctx, element); } stripLast = !preserve && (as.getIterator().first() == ' '); if (stripLast && !result.isEmpty()) { AttributedString las = (AttributedString) result.removeLast(); if (las != null) { AttributedCharacterIterator iter = las.getIterator(); int endIndex = iter.getEndIndex()-1; if (iter.setIndex(endIndex) == ' ') { las = new AttributedString( las.getIterator(null, iter.getBeginIndex(), endIndex)); } result.add(las); } } result.add(as); } } first = false; } return result; } | 46680 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46680/53cdbea418666ebb910c6f217e648b1581a19135/SVGTextElementBridge.java/buggy/sources/org/apache/batik/bridge/SVGTextElementBridge.java | [
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try { ISuportePersistente sp = PersistenceSupportFactory.getDefaultPersistenceSupport(); List exams = sp.getIPersistentExam().readBy(day, beginning); List allRooms = sp.getISalaPersistente().readAll(); List occupiedRooms = new ArrayList(); for (int i = 0; i < exams.size(); i++) { List examRooms = ((IExam) exams.get(i)).getAssociatedRooms(); if (examRooms != null && examRooms.size() > 0) { for (int r = 0; r < examRooms.size(); r++) { occupiedRooms.add(examRooms.get(r)); } | List occupiedRooms = new ArrayList(); for (int i = 0; i < exams.size(); i++) { List examRooms = ((IExam) exams.get(i)).getAssociatedRooms(); if (examRooms != null && examRooms.size() > 0) { for (int r = 0; r < examRooms.size(); r++) { occupiedRooms.add(examRooms.get(r)); | public List run(Calendar day, Calendar beginning) { List availableRooms = new ArrayList(); List availableInfoRooms = new ArrayList(); try { ISuportePersistente sp = PersistenceSupportFactory.getDefaultPersistenceSupport(); List exams = sp.getIPersistentExam().readBy(day, beginning); List allRooms = sp.getISalaPersistente().readAll(); List occupiedRooms = new ArrayList(); for (int i = 0; i < exams.size(); i++) { List examRooms = ((IExam) exams.get(i)).getAssociatedRooms(); if (examRooms != null && examRooms.size() > 0) { for (int r = 0; r < examRooms.size(); r++) { occupiedRooms.add(examRooms.get(r)); } } } availableRooms = (ArrayList) CollectionUtils.subtract(allRooms, occupiedRooms); for (int i = 0; i < availableRooms.size(); i++) { IRoom room = (IRoom) availableRooms.get(i); InfoRoom infoRoom = Cloner.copyRoom2InfoRoom(room); availableInfoRooms.add(infoRoom); } } catch (ExcepcaoPersistencia ex) { ex.printStackTrace(); } return availableInfoRooms; } | 2645 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2645/d1570a87dd2b404cd64317e0adcdc6d796eb389d/ReadRoomsWithNoExamsInDayAndBeginning.java/buggy/src/net/sourceforge/fenixedu/applicationTier/Servico/sop/ReadRoomsWithNoExamsInDayAndBeginning.java | [
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for (PDOMLinkage linkage = pdom.getFirstLinkage(); linkage != null; linkage = linkage.getNextLinkage()) | PDOMLinkage firstLinkage = pdom.getFirstLinkage(); for (PDOMLinkage linkage = firstLinkage; linkage != null; linkage = linkage.getNextLinkage()) | public Object[] getChildren(Object parentElement) { try { if (parentElement instanceof ICProject) { PDOM pdom = (PDOM)CCorePlugin.getPDOMManager().getPDOM((ICProject)parentElement); int n = 0; for (PDOMLinkage linkage = pdom.getFirstLinkage(); linkage != null; linkage = linkage.getNextLinkage()) ++n; PDOMLinkage[] linkages = new PDOMLinkage[n]; int i = 0; for (PDOMLinkage linkage = pdom.getFirstLinkage(); linkage != null; linkage = linkage.getNextLinkage()) linkages[i++] = linkage; return linkages; } else if (parentElement instanceof IPDOMNode) { IPDOMNode node = (IPDOMNode)parentElement; Counter counter = new Counter(); node.accept(counter); IPDOMNode[] children = new IPDOMNode[counter.count]; Children childrener = new Children(children); node.accept(childrener); return children; } } catch (CoreException e) { CUIPlugin.getDefault().log(e); } return new Object[0]; } | 6192 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6192/e9eb7ef7e61bb6bbea17ee25aa648a353da6edd7/IndexView.java/clean/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/ui/indexview/IndexView.java | [
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public void setupExternalMessages(Frame parentFrame) { | public void setupExternalMessages() { | public void setupExternalMessages(Frame parentFrame) { final Worker worker = new Worker(); parentFrame.addComponentListener(new ComponentAdapter() { public void componentMoved(ComponentEvent e) { Point where = ((Frame) e.getSource()).getLocation(); System.err.println(PApplet.EXTERNAL_MOVE + " " + where.x + " " + where.y); System.err.flush(); // doesn't seem to help or hurt } }); parentFrame.addWindowListener(new WindowAdapter() { public void windowClosing(WindowEvent e) { System.err.println(PApplet.EXTERNAL_QUIT); System.err.flush(); // important System.exit(0); } }); } | 8833 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8833/52c64c106566e3207af744fc23ddf0947ca005f4/PApplet.java/buggy/core/PApplet.java | [
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if (jj_3R_288()) return true; if (jj_la == 0 && jj_scanpos == jj_lastpos) return false; return false; | Token xsp; xsp = jj_scanpos; if (jj_3R_255()) { jj_scanpos = xsp; if (jj_3R_256()) return true; | static final private boolean jj_3R_223() { if (jj_3R_288()) return true; if (jj_la == 0 && jj_scanpos == jj_lastpos) return false; return false; } | 45569 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45569/23e69d576250f417c265d779703b8da08a67aaed/CPPParser.java/clean/pmd/src/net/sourceforge/pmd/cpd/cppast/CPPParser.java | [
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actualDH = (DataHandler)binaryNode.getDataHandler(); | actualDH = (DataHandler) binaryNode.getDataHandler(); | public OMElement mtomSample(OMElement element) throws Exception { OMElement imageEle = element.getFirstElement(); OMElement imageName = (OMElement) imageEle.getNextOMSibling(); OMText binaryNode = (OMText) imageEle.getFirstOMChild(); String fileName = imageName.getText(); //Extracting the data and saving DataHandler actualDH; actualDH = (DataHandler)binaryNode.getDataHandler(); Image actualObject = new ImageIO().loadImage(actualDH.getDataSource() .getInputStream()); FileOutputStream imageOutStream = new FileOutputStream(fileName); new ImageIO().saveImage("image/jpeg", actualObject, imageOutStream); //setting response OMFactory fac = OMAbstractFactory.getOMFactory(); OMNamespace ns = fac.createOMNamespace("urn://fakenamespace", "ns"); OMElement ele = fac.createOMElement("response", ns); ele.setText("Image Saved"); return ele; } | 49300 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49300/24e267b85cc91c8ca4f6752fa542b505e8b3706d/MTOMService.java/clean/modules/samples/src/sample/mtom/imagetransfer/service/MTOMService.java | [
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public void init(String tag, AttributeList attrs) throws SAXParseException { | public void init(String tag, AttributeList attrs) throws SAXParseException { | public void init(String tag, AttributeList attrs) throws SAXParseException { try { task = project.createTask(tag); } catch (BuildException e) { // swallow here, will be thrown again in // UnknownElement.maybeConfigure if the problem persists. } if (task == null) { task = new UnknownElement(tag); task.setProject(project); } task.setLocation(new Location(buildFile.toString(), locator.getLineNumber(), locator.getColumnNumber())); configureId(task, attrs); // Top level tasks don't have associated targets if (target != null) { task.setOwningTarget(target); target.addTask(task); task.init(); wrapper = task.getRuntimeConfigurableWrapper(); wrapper.setAttributes(attrs); } else { task.init(); configure(task, attrs, project); } } | 506 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/506/adbdf5d6c830f14edbfd28f91c2c7b1a14229291/ProjectHelper.java/buggy/src/main/org/apache/tools/ant/ProjectHelper.java | [
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private void generateStatic(List constructors, CallbackGenerator[] generators, List[] methods) throws Exception { | private void generateStatic(List constructors, CallbackGenerator[] generators, CallbackGenerator.Context[] contexts) throws Exception { | private void generateStatic(List constructors, CallbackGenerator[] generators, List[] methods) throws Exception { begin_static(); new_instance(HashMap.class); dup(); invoke_constructor(HashMap.class); dup(); putfield(CONSTRUCTOR_PROXY_MAP); Local map = make_local(); store_local(map); for (int i = 0, size = constructors.size(); i < size; i++) { Constructor constructor = (Constructor)constructors.get(i); Class[] types = constructor.getParameterTypes(); load_local(map); push(types); invoke(NEW_CLASS_KEY); // key load_class_this(); push(types); invoke(MethodConstants.GET_DECLARED_CONSTRUCTOR); invoke(MAKE_CONSTRUCTOR_PROXY); // value invoke(MethodConstants.MAP_PUT); // put(key(agrgTypes[]), proxy) pop(); } for (int i = 0; i <= Callbacks.MAX_VALUE; i++) { if (usedCallbacks.get(i)) { new_instance(ThreadLocal.class); dup(); invoke_constructor(ThreadLocal.class); putfield(getThreadLocal(i)); } } for (int i = 0; i <= Callbacks.MAX_VALUE; i++) { if (generators[i] != null) { generators[i].generateStatic(this, methods[i]); } } return_value(); end_method(); } | 836 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/836/2131acff8c6d89d16c19da3c50cf689e6652d87f/EnhancerGenerator.java/buggy/src/proxy/net/sf/cglib/EnhancerGenerator.java | [
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disposeSession(request); | public void serviceAction(PortletRequest request, PortletResponse response, String namespace, String actionName, Map requestMap, Map parameterMap, Map sessionMap, Map applicationMap) { addSession(request); log.debug("Getting to serviceAction with namespace:" + namespace + " actionName:" + actionName); HashMap extraContext = createContextMap(requestMap, parameterMap, sessionMap, applicationMap, request, response, getPortletConfig()); if (namespace.length() > 0) { namespace = new StringBuffer("/").append(namespace).toString(); } log.debug(sessionMap); log.debug(parameterMap); extraContext.put(PORTLET_DISPATCHER, this); log.debug("Getting to beginning of serviceAction"); log.debug(new StringBuffer().append("Namespace: ").append(namespace).append("\nAction: ").append(actionName).append("\nPortlet Name: ").append(getPortletName()).toString()); try { if (request instanceof RenderRequest) { log.debug("Yes - it was a render request...."); if (request.getPortletSession(true).getAttribute(ACTION_CONTEXT) != null) { log.debug("Getting key for old action"); // String oldActionKey = request.getParameter("com.opensymphony.webwork.portlet.ActionContextKey"); ActionContext oldAction = (ActionContext) request.getPortletSession().getAttribute(ACTION_CONTEXT); extraContext.put(ActionContext.VALUE_STACK, oldAction.getValueStack()); extraContext.put(ActionContext.PARAMETERS, oldAction.getParameters()); request.getPortletSession().removeAttribute(ACTION_CONTEXT); log.debug("Should have removed the key"); } } String actionOverride = (String) request.getParameter("xwork.action"); if (actionOverride != null) { log.debug("Override action is " + actionOverride); actionName = actionOverride; } ActionProxy proxy = ActionProxyFactory.getFactory().createActionProxy(namespace, actionName, extraContext); request.setAttribute("webwork.valueStack", proxy.getInvocation().getStack()); proxy.execute(); //TODO: This code is a B.S. cheat by me. Need to figure out if this is even needed. if (request instanceof ActionRequest) { request.getPortletSession().setAttribute(ACTION_CONTEXT, proxy.getInvocation().getInvocationContext()); } } catch (ConfigurationException e) { log.error("Could not find action", e); // sendError(request, response, HttpServletResponse.SC_NOT_FOUND, // e); } catch (Exception e) { log.error("Could not execute action", e); // sendError(request, response, HttpServletResponse.SC_INTERNAL_SERVER_ERROR, e); } } | 56353 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56353/ddadd9a78e09b967c5f592f31fa1d80f61de959d/PortletDispatcher.java/buggy/src/com/opensymphony/webwork/portlet/dispatcher/PortletDispatcher.java | [
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else if ( currentDataSetName.equals( newName ) ) | else if ( currentDataSetName == newName || ( currentDataSetName != null && currentDataSetName.equals( newName ) ) ) | private int canChangeDataSet( String newName ) { String currentDataSetName = getDataSetName( ); if ( NONE.equals( currentDataSetName ) && !inputElement.columnBindingsIterator( ).hasNext( ) ) { return 0; } else if ( currentDataSetName.equals( newName ) ) { return 2; } MessageDialog prefDialog = new MessageDialog( UIUtil.getDefaultShell( ), Messages.getString( "dataBinding.title.changeDataSet" ),//$NON-NLS-1$ null, Messages.getString( "dataBinding.message.changeDataSet" ),//$NON-NLS-1$ MessageDialog.INFORMATION, new String[]{ IDialogConstants.YES_LABEL, IDialogConstants.NO_LABEL, IDialogConstants.CANCEL_LABEL, }, 0 ); return prefDialog.open( ); } | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/f85fae8f75d2975e05e2137aa3d4d72a2e2b66b1/ColumnBindingDialog.java/buggy/UI/org.eclipse.birt.report.designer.ui/src/org/eclipse/birt/report/designer/ui/dialogs/ColumnBindingDialog.java | [
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IResource resource = markerData[i].getResource(); Map attributes = markerData[i].getAttributes(); IMarker marker = resource .createMarker(IMarker.BOOKMARK); marker.setAttributes(attributes); newMarkers.add(marker); } | newMarkerResources.add(markerData[i].getResource()); newMarkerAttributes.add(markerData[i].getAttributes()); } | public void run() { // Get the markers from the clipboard MarkerTransfer transfer = MarkerTransfer.getInstance(); final IMarker[] markerData = (IMarker[]) view.getClipboard() .getContents(transfer); if (markerData == null) { return; } final ArrayList newMarkers = new ArrayList(); try { view.getWorkspace().run(new IWorkspaceRunnable() { public void run(IProgressMonitor monitor) throws CoreException { for (int i = 0; i < markerData.length; i++) { // Only paste tasks (not problems) if (!markerData[i].getType().equals(IMarker.BOOKMARK)) { continue; } // Paste to the same resource as the original IResource resource = markerData[i].getResource(); Map attributes = markerData[i].getAttributes(); IMarker marker = resource .createMarker(IMarker.BOOKMARK); marker.setAttributes(attributes); newMarkers.add(marker); } } }, null); } catch (CoreException e) { ErrorDialog.openError(view.getShell(), BookmarkMessages.PasteBookmark_errorTitle, null, e.getStatus()); return; } // Need to do this in an asyncExec, even though we're in the UI thread here, // since the bookmark navigator updates itself with the addition in an asyncExec, // which hasn't been processed yet. // Must be done outside IWorkspaceRunnable above since notification for add is // sent after IWorkspaceRunnable is run. if (newMarkers.size() > 0) { view.getShell().getDisplay().asyncExec(new Runnable() { public void run() { view.getViewer().setSelection( new StructuredSelection(newMarkers)); view.updatePasteEnablement(); } }); } } | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/1fe5fd7b39eab71b7bac7df6eaec945ee1d5850f/PasteBookmarkAction.java/buggy/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/views/bookmarkexplorer/PasteBookmarkAction.java | [
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public void visitOpAsgn1Node(Node iVisited) { visit(iVisited); leave(iVisited); } | public void visitOpAsgn1Node(Node iVisited) { visit(iVisited); leave(iVisited); } | public void visitOpAsgn1Node(Node iVisited) { visit(iVisited); leave(iVisited); } | 50993 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50993/d31a76ee29d5978a9bec41e3ac9134cee024bcab/NodeVisitorAdapter.java/clean/org/jruby/nodes/NodeVisitorAdapter.java | [
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public String toString(HtmlPage htmlPage, Object javaScriptObject) { | public String toString(final HtmlPage htmlPage, final Object javaScriptObject) { | public String toString(HtmlPage htmlPage, Object javaScriptObject) { return delegate_.toString(htmlPage, javaScriptObject); } | 47843 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47843/bfbb9e2a2e54bf7040308f5f0b4fd744c80370c8/JavaScriptEngineTest.java/buggy/htmlunit/src/test/java/com/gargoylesoftware/htmlunit/javascript/JavaScriptEngineTest.java | [
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throw new PluginConfigurationException( errorMessage.toString() ); | throw new PluginConfigurationException( goal.getPluginDescriptor(), errorMessage.toString() ); | private void validatePomConfiguration( MojoDescriptor goal, PlexusConfiguration pomConfiguration ) throws PluginConfigurationException { List parameters = goal.getParameters(); if ( parameters == null ) { return; } for ( int i = 0; i < parameters.size(); i++ ) { Parameter parameter = (Parameter) parameters.get( i ); // the key for the configuration map we're building. String key = parameter.getName(); PlexusConfiguration value = pomConfiguration.getChild( key, false ); if ( value == null && StringUtils.isNotEmpty( parameter.getAlias() ) ) { key = parameter.getAlias(); value = pomConfiguration.getChild( key, false ); } if ( value != null ) { // Make sure the parameter is either editable/configurable, or else is NOT specified in the POM if ( !parameter.isEditable() ) { StringBuffer errorMessage = new StringBuffer() .append( "ERROR: Cannot override read-only parameter: " ); errorMessage.append( key ); errorMessage.append( " in goal: " ).append( goal.getFullGoalName() ); throw new PluginConfigurationException( errorMessage.toString() ); } String deprecated = parameter.getDeprecated(); if ( StringUtils.isNotEmpty( deprecated ) ) { getLogger().warn( "DEPRECATED [" + parameter.getName() + "]: " + deprecated ); } } } } | 11530 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11530/63b3f71f6d4ab4ca0093d626eb5551c5c567120a/DefaultPluginManager.java/buggy/maven-core/src/main/java/org/apache/maven/plugin/DefaultPluginManager.java | [
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for (int f = 0; f < structures.size(); f++) | for (int f = 0; f < structures.size(); f+=100) | private boolean everythingOk(Vector structures) { StructureDiagramGenerator sdg = null; MoleculeViewer2D mv = null; Molecule mol = null; for (int f = 0; f < structures.size(); f++) { sdg = new StructureDiagramGenerator(); mol = (Molecule)structures.elementAt(f); sdg.setMolecule((Molecule)mol.clone()); try { sdg.generateCoordinates(new Vector2d(0,1)); } catch(Exception exc) { exc.printStackTrace(); fail("*** Exit due to an unexpected error during coordinate generation ***"); } if (standAlone) { mv.setAtomContainer(sdg.getMolecule()); mv = new MoleculeViewer2D(); // Renderer2DModel r2dm = new Renderer2DModel(); // r2dm.setDrawNumbers(true); // mv.setRenderer2DModel(r2dm); moleculeListViewer.addStructure(mv, "RandomGent Result no. " + (f + 1)); } } return true; } | 1306 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1306/04defc052c52e4846a8ceef550bf4835e40a865f/RandomStructureGeneratorTest.java/clean/src/org/openscience/cdk/test/structgen/RandomStructureGeneratorTest.java | [
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else if(o.indexOf('.') > -1 && o.indexOf('E') == -1 && o.length() > 4) | else if((o.indexOf('.') > -1) && (o.indexOf('E') == -1) && (o.length() > 4)) | public static String formatSize(long sz) { // First determine suffix String[] suffixes = {"B", "KiB","MiB","GiB","TiB","PiB","EiB","ZiB","YiB"}; long s = 1; int i; for(i=0;i<suffixes.length;i++) { s *= 1024; if(s > sz) { break; // Smaller than multiplier [i] - use the previous one } } s /= 1024; // we use the previous unit if (s == 1) // Bytes? Then we don't need real numbers with a comma { return sz + " " + suffixes[0]; } else { double mantissa = (double)sz / (double)s; String o = Double.toString(mantissa); if(o.indexOf('.') == 3) o = o.substring(0, 3); else if(o.indexOf('.') > -1 && o.indexOf('E') == -1 && o.length() > 4) o = o.substring(0, 4); o += " " + suffixes[i]; return o; } } | 56348 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56348/ca136843ae9ecb30cadada58a33a5dc2cf8ad064/SizeUtil.java/buggy/src/freenet/support/SizeUtil.java | [
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if (myCachedIsEnum == null) { final boolean isEnum; if (getTreeElement() != null) { isEnum = ((ClassElement)getTreeElement()).isEnum(); } else { isEnum = getRepositoryManager().getClassView().isEnum(getRepositoryId()); } myCachedIsEnum = Boolean.valueOf(isEnum); | Boolean cachedIsEnum = myCachedIsEnum; if (cachedIsEnum == null) { final boolean isEnum; if (getTreeElement() != null) { isEnum = ((ClassElement)getTreeElement()).isEnum(); | public boolean isEnum() { if (myCachedIsEnum == null) { final boolean isEnum; if (getTreeElement() != null) { isEnum = ((ClassElement)getTreeElement()).isEnum(); } else { isEnum = getRepositoryManager().getClassView().isEnum(getRepositoryId()); } myCachedIsEnum = Boolean.valueOf(isEnum); } return myCachedIsEnum.booleanValue(); } | 56627 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56627/284ddbdbfb5075a2e53d2b81a79a07fbcf319987/PsiClassImpl.java/buggy/source/com/intellij/psi/impl/source/PsiClassImpl.java | [
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public void skippedEntity (String name) { /* ignored */ } | public void skippedEntity(String name) { /* ignored */ } | public void skippedEntity (String name) { /* ignored */ } | 56365 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56365/7fb7568e63c3fe14af521de4699cb37898923ca7/SAXDriver.java/clean/libjava/gnu/xml/aelfred2/SAXDriver.java | [
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ai.addAttribute(uri,"id","id","CDATA",layoutStore.getNextFragmentId()); | String id = layoutStore.getNextFragmentId(); if ( !fragmentIds.containsKey(name) ) fragmentIds.put(name,id); ai.addAttribute(uri,"id","id","CDATA",id); | public void startElement (String uri, String localName, String qName, Attributes atts) throws SAXException { AttributesImpl ai=new AttributesImpl(atts); // Adding the fragment name to the vector if ( qName.equals("fragment") ) { String name = atts.getValue("name"); if ( !fragmentNames.contains(name) ) fragmentNames.add(name); try { ai.addAttribute(uri,"id","id","CDATA",layoutStore.getNextFragmentId()); } catch ( PortalException pe ) { throw new SAXException(pe.getMessage()); } } // Getting the channel ID by the fname else if ( qName.equals("channel") ) { String fname = atts.getValue("fname"); try { ChannelDefinition chanDef = channelStore.getChannelDefinition(fname); ai.addAttribute(uri,"id","id","CDATA",chanDef.getId()+""); } catch ( Exception e ) { throw new SAXException(e.getMessage()); } } if(qName.equals("group")) { // this could be made more robust by adding another mode for "groups" element groupMode=true; groupUri=uri; groupLocalName=localName; groupAtts=new AttributesImpl(atts); } else if(qName.equals("restriction")) { // this can also be made more robust by adding another mode for "restrictions" element // look up restriction name in the DB String restrType; if(ai.getIndex("type")!=-1) { // restriction type was specified if(!rMap.containsValue(ai.getValue("type"))) { System.out.println("ERROR: specified restriction type \""+ai.getValue("type")+"\" does not exist ! Either correct the type value, or consider using match by restriction name (i.e. <restriction name=\"priority\" ...)"); System.exit(1); } else { if(ai.getIndex("name")!=-1 && rMap.containsKey(ai.getValue("name")) && (!ai.getValue("type").equals((String)rMap.get(ai.getValue("name"))))) { System.out.println("ERROR: specified restriction type \""+ai.getValue("type")+"\" does not match the specified name \""+ai.getValue("name")+"\" in the database. name \""+ai.getValue("name")+"\" matches restriction type \""+(String)rMap.get(ai.getValue("name"))+"\""); System.exit(1); } else { super.startElement(uri,localName,qName,ai); } } } else { String restrName=ai.getValue("name"); restrType=(String)rMap.get(restrName); if(restrType!=null) { ai.addAttribute(uri,"type","type","CDATA",restrType); } else { System.out.println("ERROR: config file specifies a restriction name \""+restrName+"\" which is not registered with the database!"); System.exit(1); } super.startElement(uri,localName,qName,ai); } } else { super.startElement(uri,localName,qName,ai); } } | 1895 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1895/005d784e831f62efec084cf3c63e3b39aaccc2a1/PushFragmentLoader.java/clean/source/org/jasig/portal/layout/utils/PushFragmentLoader.java | [
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filter.onResource = TasksFilter.ON_SELECTED_RESOURCE_ONLY; | tasksFilter.onResource = TasksFilter.ON_SELECTED_RESOURCE_ONLY; | void updateFilterFromUI(TasksFilter filter) { filter.types = getSelectedTypes(); if (selectedResourceButton.getSelection()) filter.onResource = TasksFilter.ON_SELECTED_RESOURCE_ONLY; else if (selectedResourceAndChildrenButton.getSelection()) filter.onResource = TasksFilter.ON_SELECTED_RESOURCE_AND_CHILDREN; else if (anyResourceInSameProjectButton.getSelection()) // added by cagatayk@acm.org filter.onResource = TasksFilter.ON_ANY_RESOURCE_OF_SAME_PROJECT; else if (workingSetGroup.getSelection()) filter.onResource = TasksFilter.ON_WORKING_SET; else filter.onResource = TasksFilter.ON_ANY_RESOURCE; filter.workingSet = workingSetGroup.getWorkingSet(); filter.descriptionFilterKind = descriptionGroup.combo.getSelectionIndex(); filter.descriptionFilter = descriptionGroup.text.getText(); filter.filterOnDescription = !filter.descriptionFilter.equals("");//$NON-NLS-1$ filter.filterOnSeverity = severityGroup.getSelection(); filter.severityFilter = severityGroup.getValueMask(); filter.filterOnPriority = priorityGroup.getSelection(); filter.priorityFilter = priorityGroup.getValueMask(); filter.filterOnCompletion = completionGroup.getSelection(); filter.completionFilter = completionGroup.getValueMask(); int markerLimit = TasksFilter.DEFAULT_MARKER_LIMIT; try { markerLimit = Integer.parseInt(this.markerLimit.getText()); } catch (NumberFormatException eNumberFormat) { } filter.setMarkerLimit(markerLimit); filter.setFilterOnMarkerLimit(filterOnMarkerLimit.getSelection()); } | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/e365c8c256fc9bd61d9d458bb74ff408ae201fd1/FiltersDialog.java/clean/bundles/org.eclipse.ui.views/src/org/eclipse/ui/views/tasklist/FiltersDialog.java | [
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LineGraph graph = new LineGraph(scenarioName + ": " + dimensionName, | TimeLineGraph graph = new TimeLineGraph(scenarioName + ": " + dimensionName, | public static LineGraph getLineGraph(Scenario t, String dimensionName, String reference, String current,ArrayList pointsOfInterest) { Display display = Display.getDefault(); Color black = display.getSystemColor(SWT.COLOR_BLACK); Color yellow = display.getSystemColor(SWT.COLOR_DARK_YELLOW); Color magenta = display.getSystemColor(SWT.COLOR_MAGENTA); String scenarioName = t.getScenarioName(); Dim[] dimensions = t.getDimensions(); Dim dim=null; for (int i = 0; i < dimensions.length; i++) { if (dimensions[i].getName().equals(dimensionName)) dim = dimensions[i]; } LineGraph graph = new LineGraph(scenarioName + ": " + dimensionName, dim); TimeSeries ts = null; try { ts = t.getTimeSeries(dim); int n = ts.getLength(); if (n > 0) { for (int j = 0; j < n; j++) { String buildID = ts.getLabel(j); double value = ts.getValue(j); Color c=yellow; if (buildID.equals(reference)||pointsOfInterest.contains(buildID)) c =magenta; else if (buildID.startsWith("I")) c=black; int underscoreIndex = buildID.indexOf('_'); String label = (buildID.indexOf('_') == -1) ? buildID : buildID .substring(0, underscoreIndex); if (buildID.equals(reference) || buildID.equals(current)){ graph.addItem(label, dim.getDisplayValue(value), value, c, true); } else if(buildID.startsWith("I")||pointsOfInterest.contains(buildID)||lastSevenNightlyBuildNames(t.getTimeSeriesLabels(),current).contains(buildID)) graph.addItem(buildID, dim.getDisplayValue(value), value, c); if (buildID.equals(current)) break; } } } catch (AssertionFailedError e) { // System.err.println("Unable to get result for: // "+t.getScenarioName()+" "+ts.toString()); } return graph; } | 14684 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14684/876bedbe6ffa2dbb2fb90d526f4b168a2773da5f/Utils.java/clean/bundles/org.eclipse.test.performance.ui/src/org/eclipse/test/performance/ui/Utils.java | [
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if (resource instanceof IFile) | if (resource instanceof IFile) { | private static IEditorInput getEditorInput(ICElement element) throws CModelException { while (element != null) { if (element instanceof IWorkingCopy && ((IWorkingCopy) element).isWorkingCopy()) element= ((IWorkingCopy) element).getOriginalElement(); if (element instanceof ISourceReference) { ITranslationUnit tu = ((ISourceReference)element).getTranslationUnit(); if (tu != null) { element = tu; } } if (element instanceof ITranslationUnit) { ITranslationUnit unit= (ITranslationUnit) element; IResource resource= unit.getResource(); if (resource instanceof IFile) return new FileEditorInput((IFile) resource); } if (element instanceof IBinary) { //return new InternalClassFileEditorInput((IBinary) element); return new ExternalEditorInput(getStorage((IBinary)element)); } element= element.getParent(); } return null; } | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/f7ff3c2496e2f3b716249b1f5ad3c2078cfb9111/EditorUtility.java/buggy/core/org.eclipse.cdt.ui/src/org/eclipse/cdt/internal/ui/util/EditorUtility.java | [
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if (stmt != null) { stmt.executeUpdate("DROP TABLE testbatch"); stmt.close(); } if (con != null) { JDBC2Tests.closeDB(con); } | JDBC2Tests.dropTable(con, "testbatch"); JDBC2Tests.closeDB(con); | protected void tearDown() throws Exception { con.setAutoCommit(true); if (stmt != null) { stmt.executeUpdate("DROP TABLE testbatch"); stmt.close(); } if (con != null) { JDBC2Tests.closeDB(con); } } | 47293 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47293/b75814aee320ef2b67ad01ba72c266dbbf94db45/BatchExecuteTest.java/clean/src/interfaces/jdbc/org/postgresql/test/jdbc2/BatchExecuteTest.java | [
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public static final void formatSize(Address buffer, int size) {} | public static final void formatSize(Address buffer, int size) { } | public static final void formatSize(Address buffer, int size) {} | 49871 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49871/57a34fa3e6e607d84b46e06082997a4771a25a85/Util.java/buggy/MMTk/ext/vm/stub/org/mmtk/vm/gcspy/Util.java | [
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if (a.isEnabled()) { | if (a.isEnabled()) { | public void processKeyEvent(KeyEvent e) { if (CodeStatus.DEVELOPMENT) { KeyStroke ks = KeyStroke.getKeyStrokeForEvent(e); Action a = _keyBindingManager.get(ks); if (a != null) { if (a.isEnabled()) {// prevents the user from undoing (for example) if it's not enabled a.actionPerformed(null); } e.consume(); } else { if (((ks.getModifiers() & mask) != 0) || ks.getKeyChar() == '\010') // backspace deletes twice without this check e.consume(); } if (!e.isConsumed()) super.processKeyEvent(e); } else super.processKeyEvent(e); } | 11192 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11192/9cb55009db1cb8bd2aab8df62ce303060f475c4b/DefinitionsPane.java/clean/drjava/src/edu/rice/cs/drjava/ui/DefinitionsPane.java | [
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ruby.getCRef().push(module); | ruby.getCRef().push(module); | public RubyObject setupModule(Ruby ruby, RubyModule module) { // Node node = n; String file = ruby.getSourceFile(); int line = ruby.getSourceLine(); // TMP_PROTECT; RubyFrame frame = ruby.getRubyFrame(); frame.setTmp(ruby.getRubyFrame()); ruby.setRubyFrame(frame); ruby.pushClass(); ruby.setRubyClass(module); ruby.getRubyScope().push(); RubyVarmap.push(ruby); if (getTable() != null) { /*List tmp = Collections.nCopies(idTable[0].intValue() + 1, ruby.getNil()); ShiftableList vars = new ShiftableList(new ArrayList(tmp)); vars.set(0, this); vars.shift(1);*/ RubyPointer vars = new RubyPointer(ruby.getNil(), getTable().getId(0).intValue() + 1); vars.set(0, this); vars.inc(); ruby.getRubyScope().setLocalVars(vars); ruby.getRubyScope().setLocalTbl(getTable()); } else { ruby.getRubyScope().setLocalVars(null); ruby.getRubyScope().setLocalTbl(null); } // +++ // if (ruby.getCRef() != null) { ruby.getCRef().push(module); // } else { // ruby.setCRef(new CRefNode(module, null)); // } // --- ruby.getRubyFrame().setCbase(ruby.getCRef()); // PUSH_TAG(PROT_NONE); RubyObject result = null; // if (( state = EXEC_TAG()) == 0 ) { // if (trace_func) { // call_trace_func("class", file, line, ruby_class, // ruby_frame->last_func, ruby_frame->last_class ); // } result = getNextNode() != null ? getNextNode().eval(ruby, ruby.getRubyClass()) : ruby.getNil(); // } // POP_TAG(); ruby.getCRef().pop(); RubyVarmap.pop(ruby); ruby.getRubyScope().pop(); ruby.popClass(); ruby.setRubyFrame(frame.getTmp()); // if (trace_func) { // call_trace_func("end", file, line, 0, ruby_frame->last_func, ruby_frame->last_class ); // } // if (state != 0) { // JUMP_TAG(state); // } return result; } | 48300 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48300/f629550c5947df9c1dbe414645f3dc76bcb70df4/ScopeNode.java/buggy/org/jruby/nodes/ScopeNode.java | [
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List argsList = rubyFrame.getArgs(); | List argsList = getRubyFrame().getArgs(); | public RubyObject eval(RubyObject self, NODE n) { NODE node = n; RubyBoolean cond = null; RubyObject[] args = null; RubyObject value = null; RubyObject result = null; RubyModule rubyClass = null; // int state; // RubyOriginalMethods rom = getRuby().getOriginalMethods(); while (true) { if (node == null) { return getRuby().getNil(); } switch (node.nd_type()) { case NODE_BLOCK: while (node.nd_next() != null) { eval(self, node.nd_head()); node = node.nd_next(); } node = node.nd_head(); break; case NODE_POSTEXE: // rb_f_END(); node.nd_set_type(NODE_NIL); /* exec just once */ return getRuby().getNil(); /* begin .. end without clauses */ case NODE_BEGIN: node = node.nd_body(); break; /* nodes for speed-up(default match) */ case NODE_MATCH: //return rom.rb_reg_match2(node.nd_head().nd_lit()); return getRuby().getNil(); /* nodes for speed-up(literal match) */ case NODE_MATCH2: //return rom.rb_reg_match(eval(node.nd_recv()), eval(node.nd_value())); return getRuby().getNil(); /* nodes for speed-up(literal match) */ case NODE_MATCH3: //VALUE r = eval(node.nd_recv()); //VALUE l = eval(node.nd_value()); //if (r instanceof RubyString) { // return rom.rb_reg_match(l, r); //} else { // return rom.rb_funcall(r, match, 1, l); //} return getRuby().getNil(); /* node for speed-up(top-level loop for -n/-p) */ case NODE_OPT_N: while (true) { try { // while (!rb_gets().isNil() false) { // HACK +++ if (true) { // HACK --- try { eval(self, node.nd_body()); } catch (RedoException rExcptn) { } } break; } catch (NextException nExcptn) { } catch (BreakException bExcptn) { break; } } return getRuby().getNil(); case NODE_SELF: return self; case NODE_NIL: return getRuby().getNil(); case NODE_TRUE: return getRuby().getTrue(); case NODE_FALSE: return getRuby().getFalse(); case NODE_IF: // ruby_sourceline = node.nd_line(); cond = (RubyBoolean)eval(self, node.nd_cond()); if (cond.isTrue()) { node = node.nd_body(); } else { node = node.nd_else(); } break; case NODE_WHEN: while (node != null) { NODE tag; if (node.nd_type() != NODE_WHEN) { break; } tag = node.nd_head(); while (tag != null) {/* if (trace_func) { call_trace_func("line", tag->nd_file, nd_line(tag), self, ruby_frame->last_func, ruby_frame->last_class); }*/ // ruby_sourcefile = tag.nd_file; // ruby_sourceline = tag.nd_line(); if (tag.nd_head().nd_type() == NODE_WHEN) { RubyObject obj = eval(self, tag.nd_head().nd_head()); if (!(obj instanceof RubyArray)) { obj = RubyArray.m_newArray(getRuby(), obj); } for (int i = 0; i < ((RubyArray)obj).length(); i++) { if (((RubyBoolean)((RubyArray)obj).entry(i)).isTrue()) { node = node.nd_body(); break; } } tag = tag.nd_next(); continue; } if (((RubyBoolean)eval(self, tag.nd_head())).isTrue()) { node = node.nd_body(); break; } tag = tag.nd_next(); } node = node.nd_next(); } return getRuby().getNil(); case NODE_CASE: RubyObject obj = eval(self, node.nd_head()); node = node.nd_body(); while (node != null) { NODE tag; if (node.nd_type() != NODE_WHEN) { break; } tag = node.nd_head(); while (tag != null) {/* if (trace_func) { call_trace_func("line", tag->nd_file, nd_line(tag), self, ruby_frame->last_func, ruby_frame->last_class); } ruby_sourcefile = tag->nd_file; ruby_sourceline = nd_line(tag);*/ if (tag.nd_head().nd_type() == NODE_WHEN) { RubyObject obj2 = eval(self, tag.nd_head().nd_head()); if (!(obj2 instanceof RubyArray)) { obj2 = RubyArray.m_newArray(getRuby(), obj2); } for (int i = 0; i < ((RubyArray)obj).length(); i++) { RubyBoolean eqq = (RubyBoolean)((RubyArray)obj2).entry(i).funcall(getRuby().intern("==="), obj); if (eqq.isTrue()) { node = node.nd_body(); break; } } tag = tag.nd_next(); continue; } if (((RubyBoolean)eval(self, tag.nd_head()).funcall(getRuby().intern("==="), obj)).isTrue()) { node = node.nd_body(); break; } tag = tag.nd_next(); } node = node.nd_next(); } return getRuby().getNil(); case NODE_WHILE: while (eval(self, node.nd_cond()).isTrue()) { while (true) { try { eval(self, node.nd_body()); break; } catch (RedoException rExcptn) { } catch (NextException nExcptn) { break; } catch (BreakException bExcptn) { return getRuby().getNil(); } } } return getRuby().getNil(); case NODE_UNTIL: while (eval(self, node.nd_cond()).isFalse()) { while (true) { try { eval(self, node.nd_body()); break; } catch (RedoException rExcptn) { } catch (NextException nExcptn) { break; } catch (BreakException bExcptn) { return getRuby().getNil(); } } } return getRuby().getNil(); case NODE_BLOCK_PASS: //return block_pass(node); return null; case NODE_ITER: case NODE_FOR: rubyBlock.push(node.nd_var(), node.nd_body(), self); rubyIter.push(Iter.ITER_PRE); while (true) { try { if (node.nd_type() == NODE_ITER) { result = eval(self, node.nd_iter()); } else { // String file = // int line = rubyBlock.flags &= ~RubyBlock.BLOCK_D_SCOPE; RubyBlock tmpBlock = beginCallargs(); RubyObject recv = eval(self, node.nd_iter()); endCallArgs(tmpBlock); // = file; // = line; result = recv.getRubyClass().call(recv, ruby.intern("each"), null, 0); } break; } catch (RetryException rExcptn) { } catch (ReturnException rExcptn) { result = rExcptn.getReturnValue(); break; } catch (BreakException bExcptn) { result = ruby.getNil(); break; } } rubyIter.pop(); rubyBlock.pop(); return result; case NODE_BREAK: throw new BreakException(); case NODE_NEXT: throw new NextException(); case NODE_REDO: throw new RedoException(); case NODE_RETRY: throw new RetryException(); case NODE_RESTARGS: result = eval(self, node.nd_head()); if (!(result instanceof RubyArray)) { result = obj = RubyArray.m_newArray(getRuby(), result); } return result; case NODE_YIELD: if (node.nd_stts() != null) { result = eval(self, node.nd_stts()); if (node.nd_stts().nd_type() == NODE_RESTARGS && ((RubyArray)result).length() == 1) { result = ((RubyArray)result).entry(0); } } else { result = ruby.getNil(); } return yield0(result, null, null, false); case NODE_RESCUE:/* retry_entry: { volatile VALUE e_info = ruby_errinfo; PUSH_TAG(PROT_NONE); if ((state = EXEC_TAG()) == 0) { result = rb_eval(self, node->nd_head); } POP_TAG(); if (state == TAG_RAISE) { NODE * volatile resq = node->nd_resq; ruby_sourceline = nd_line(node); while (resq) { if (handle_rescue(self, resq)) { state = 0; PUSH_TAG(PROT_NONE); if ((state = EXEC_TAG()) == 0) { result = rb_eval(self, resq->nd_body); } POP_TAG(); if (state == TAG_RETRY) { state = 0; ruby_errinfo = Qnil; goto retry_entry; } if (state != TAG_RAISE) { ruby_errinfo = e_info; } break; } resq = resq->nd_head; /* next rescue */ /** } * } * else if (node->nd_else) { /* else clause given *//* if (!state) { /* no exception raised *//* result = rb_eval(self, node->nd_else); } } if (state) JUMP_TAG(state); } break;*/ case NODE_ENSURE:/* PUSH_TAG(PROT_NONE); if ((state = EXEC_TAG()) == 0) { result = eval(node.nd_head()); } POP_TAG(); if (node.nd_ensr()) { VALUE retval = prot_tag->retval; /* save retval *//* VALUE errinfo = ruby_errinfo; rb_eval(self, node->nd_ensr); return_value(retval); ruby_errinfo = errinfo; } if (state) JUMP_TAG(state); break;*/ case NODE_AND: cond = (RubyBoolean)eval(self, node.nd_1st()); if (cond.isFalse()) { return cond; } node = node.nd_2nd(); break; case NODE_OR: cond = (RubyBoolean)eval(self, node.nd_1st()); if (cond.isTrue()) { return cond; } node = node.nd_2nd(); break; case NODE_NOT: return RubyBoolean.m_newBoolean(getRuby(), eval(self, node.nd_1st()).isFalse()); case NODE_DOT2: case NODE_DOT3: result = RubyRange.m_newRange(getRuby(), eval(self, node.nd_beg()), eval(self, node.nd_end()), node.nd_type() == NODE_DOT3); if (node.nd_state() != 0) { return result; } if (node.nd_beg().nd_type() == NODE_LIT && (node.nd_beg().nd_lit() instanceof RubyFixnum) && node.nd_end().nd_type() == NODE_LIT && (node.nd_end().nd_lit() instanceof RubyFixnum)) { node.nd_set_type(NODE_LIT); node.nd_lit(result); } else { node.nd_state(1L); } return result; case NODE_FLIP2: /* like AWK */ /*if (ruby_scope->local_vars == 0) { rb_bug("unexpected local variable"); }*/ if (ruby.rubyScope.getLocalVars(node.nd_cnt()).isFalse()) { if (eval(self, node.nd_beg()).isTrue()) { ruby.rubyScope.setLocalVars(node.nd_cnt(), eval(self, node.nd_end()).isTrue() ? ruby.getFalse() : ruby.getTrue()); result = ruby.getTrue(); } else { result = ruby.getFalse(); } } else { if (eval(self, node.nd_end()).isTrue()) { ruby.rubyScope.setLocalVars(node.nd_cnt(), ruby.getFalse()); } result = ruby.getTrue(); } return result; case NODE_FLIP3: /* like SED */ /*if (ruby_scope->local_vars == 0) { rb_bug("unexpected local variable"); }*/ if (ruby.rubyScope.getLocalVars(node.nd_cnt()).isFalse()) { result = eval(self, node.nd_beg()).isTrue() ? ruby.getFalse() : ruby.getTrue(); ruby.rubyScope.setLocalVars(node.nd_cnt(), result); } else { if (eval(self, node.nd_end()).isTrue()) { ruby.rubyScope.setLocalVars(node.nd_cnt(), ruby.getFalse()); } result = ruby.getTrue(); } return result; case NODE_RETURN: if (node.nd_stts() != null) { result = eval(self, node.nd_stts()); } else { result = ruby.getNil(); } throw new ReturnException(result); case NODE_ARGSCAT: return ((RubyArray)eval(self, node.nd_head())).m_concat(eval(self, node.nd_body())); case NODE_ARGSPUSH: return ((RubyArray)eval(self, node.nd_head()).m_dup()).push(eval(self, node.nd_body())); case NODE_CALL: // TMP_PROTECT; RubyBlock tmpBlock = beginCallargs(); RubyObject recv = eval(self, node.nd_recv()); args = setupArgs(self, node.nd_args()); endCallArgs(tmpBlock); return recv.getRubyClass().call(recv, (RubyId)node.nd_mid(), args, 0); case NODE_FCALL: // TMP_PROTECT; tmpBlock = beginCallargs(); args = setupArgs(self, node.nd_args()); endCallArgs(tmpBlock); return self.getRubyClass().call(self, (RubyId)node.nd_mid(), args, 1); case NODE_VCALL: return self.getRubyClass().call(self, (RubyId)node.nd_mid(), null, 2); case NODE_SUPER: case NODE_ZSUPER: // TMP_PROTECT; if (rubyFrame.getLastClass() == null) { throw new RubyNameException("superclass method '" + rubyFrame.getLastFunc().toName() + "' disabled"); } if (node.nd_type() == NODE_ZSUPER) { List argsList = rubyFrame.getArgs(); args = (RubyObject[])argsList.toArray(new RubyObject[argsList.size()]); } else { tmpBlock = beginCallargs(); args = setupArgs(self, node.nd_args()); endCallArgs(tmpBlock); } rubyIter.push(rubyIter.getIter() != Iter.ITER_NOT ? Iter.ITER_PRE : Iter.ITER_NOT); result = rubyFrame.getLastClass().getSuperClass().call(rubyFrame.getSelf(), rubyFrame.getLastFunc(), args, 3); rubyIter.pop(); return result; case NODE_SCOPE: NODE saved_cref = null; Frame frame = rubyFrame; frame.setTmp(rubyFrame); rubyFrame = frame; ruby.rubyScope.push(); if (node.nd_rval() != null) { saved_cref = ruby_cref; ruby_cref = (NODE)node.nd_rval(); rubyFrame.setCbase(node.nd_rval()); } if (node.nd_tbl() != null) { List tmp = Collections.nCopies(node.nd_tbl()[0].intValue() + 1, ruby.getNil()); ShiftableList vars = new ShiftableList(new ArrayList(tmp)); vars.set(0, (VALUE)node); vars.shift(1); getRuby().rubyScope.setLocalVars(vars); getRuby().rubyScope.setLocalTbl(node.nd_tbl()); } else { getRuby().rubyScope.setLocalVars(null); getRuby().rubyScope.setLocalTbl(null); } result = eval(self, node.nd_next()); ruby.rubyScope.pop(); rubyFrame = frame.getTmp(); if (saved_cref != null) { ruby_cref = saved_cref; } return result; case NODE_OP_ASGN1: // TMP_PROTECT; recv = eval(self, node.nd_recv()); NODE rval = node.nd_args().nd_head(); args = setupArgs(self, node.nd_args().nd_next()); ArrayList argsList = new ArrayList(Arrays.asList(args)); argsList.remove(args.length - 1); RubyBoolean val = (RubyBoolean)recv.funcall(getRuby().intern("[]"), (RubyObject[])argsList.toArray(new RubyObject[argsList.size()])); switch (node.nd_mid().intValue()) { case 0: /* OR */ if (val.isTrue()) { return val; } val = (RubyBoolean)eval(self, rval); break; case 1: /* AND */ if (val.isFalse()) { return val; } val = (RubyBoolean)eval(self, rval); break; default: val = (RubyBoolean)val.funcall((RubyId)node.nd_mid(), eval(self, rval)); } args[args.length - 1] = val; return recv.funcall(getRuby().intern("[]="), args); case NODE_OP_ASGN2: ID id = node.nd_next().nd_vid(); recv = eval(self, node.nd_recv()); val = (RubyBoolean)recv.funcall((RubyId)id, (RubyObject[])null); switch (node.nd_next().nd_mid().intValue()) { case 0: /* OR */ if (val.isTrue()) { return val; } val = (RubyBoolean)eval(self, node.nd_value()); break; case 1: /* AND */ if (val.isFalse()) { return val; } val = (RubyBoolean)eval(self, node.nd_value()); break; default: val = (RubyBoolean)val.funcall((RubyId)node.nd_mid(), eval(self, node.nd_value())); } // HACK +++ val = (RubyBoolean)recv.funcall((RubyId)node.nd_next().nd_aid(), val); // HACK --- return val; case NODE_OP_ASGN_AND: cond = (RubyBoolean)eval(self, node.nd_head()); if (cond.isFalse()) { return cond; } node = node.nd_value(); break; case NODE_OP_ASGN_OR: cond = (RubyBoolean)eval(self, node.nd_head()); if ((node.nd_aid() != null && !self.isInstanceVarDefined((RubyId)node.nd_aid())) || cond.isFalse()) { node = node.nd_value(); break; } return cond; case NODE_MASGN: return massign(self, node, eval(self, node.nd_value()), false); case NODE_LASGN: // if (ruby.ruby_scope.local_vars == null) { // rb_bug("unexpected local variable assignment"); // } result = eval(self, node.nd_value()); getRuby().rubyScope.setLocalVars(node.nd_cnt(), result); return result; case NODE_DASGN: result = eval(self, node.nd_value()); RubyVarmap.assign(ruby, (RubyId)node.nd_vid(), result); return result; case NODE_DASGN_CURR: result = eval(self, node.nd_value()); RubyVarmap.assignCurrent(ruby, (RubyId)node.nd_vid(), result); return result; case NODE_GASGN: result = eval(self, node.nd_value()); ((RubyGlobalEntry)node.nd_entry()).set(result); return result; case NODE_IASGN: result = eval(self, node.nd_value()); self.setInstanceVar((RubyId)node.nd_vid(), result); return result; case NODE_CDECL: if (ruby_class == null) { throw new RubyTypeException("no class/module to define constant"); } result = eval(self, node.nd_value()); ruby_class.setConstant((RubyId)node.nd_vid(), result); return result; case NODE_CVDECL: if (ruby_cbase == null) { throw new RubyTypeException("no class/module to define class variable"); } result = eval(self, node.nd_value()); if (ruby_cbase.isSingleton()) { ruby_cbase.getInstanceVar("__attached__").getClassVarSingleton().declareClassVar((RubyId)node.nd_vid(), result); return result; } ruby_cbase.declareClassVar((RubyId)node.nd_vid(), result); return result; case NODE_CVASGN: result = eval(self, node.nd_value()); self.getClassVarSingleton().setClassVar((RubyId)node.nd_vid(), result); return result; case NODE_LVAR: //if (getRuby().ruby_scope.local_vars == null) { // rb_bug("unexpected local variable"); // } return (RubyObject)getRuby().rubyScope.getLocalVars(node.nd_cnt()); case NODE_DVAR: return getDynamicVars().getRef((RubyId)node.nd_vid()); case NODE_GVAR: return ((RubyGlobalEntry)node.nd_entry()).get(); case NODE_IVAR: return self.getInstanceVar((RubyId)node.nd_vid()); case NODE_CONST: return getConstant((NODE)rubyFrame.getCbase(), (RubyId)node.nd_vid(), self); case NODE_CVAR: /* normal method */ if (ruby_cbase == null) { return self.getRubyClass().getClassVar((RubyId)node.nd_vid()); } if (!ruby_cbase.isSingleton()) { return ruby_cbase.getClassVar((RubyId)node.nd_vid()); } return ruby_cbase.getInstanceVar("__attached__").getClassVarSingleton().getClassVar((RubyId)node.nd_vid()); case NODE_CVAR2: /* singleton method */ return self.getClassVarSingleton().getClassVar((RubyId)node.nd_vid()); case NODE_BLOCK_ARG: if (ruby.rubyScope.getLocalVars() == null) { throw new RuntimeException("BUG: unexpected block argument"); } if (isBlockGiven()) { result = getRuby().getNil(); // Create Proc object ruby.rubyScope.setLocalVars(node.nd_cnt(), result); return result; } else { return getRuby().getNil(); } case NODE_COLON2: value = eval(self, node.nd_head()); if (value instanceof RubyModule) { return ((RubyModule)value).getConstant((RubyId)node.nd_mid()); } else { return value.funcall((RubyId)node.nd_mid()); } case NODE_COLON3: return getRuby().getObjectClass().getConstant((RubyId)node.nd_mid()); case NODE_NTH_REF: // return rom.rb_reg_nth_match(node.nd_nth(), MATCH_DATA); return null; case NODE_BACK_REF: /*switch ((char)node.nd_nth()) { case '&': return rom.rb_reg_last_match(MATCH_DATA); case '`': return rom.rb_reg_match_pre(MATCH_DATA); case '\'': return rom.rb_reg_match_post(MATCH_DATA); case '+': return rom.rb_reg_match_last(MATCH_DATA); default: rom.rb_bug("unexpected back-ref"); }*/ case NODE_HASH: RubyHash hash = RubyHash.m_newHash(ruby); NODE list = node.nd_head(); while(list != null) { RubyObject key = eval(self, list.nd_head()); list = list.nd_next(); if (list == null) { // HACK +++ throw new RubyArgumentException("odd number list for Hash"); // HACK --- } value = eval(self, list.nd_head()); hash.m_aset(key, value); list = list.nd_next(); } return hash; case NODE_ZARRAY: /* zero length list */ return RubyArray.m_newArray(getRuby()); case NODE_ARRAY: ArrayList ary = new ArrayList(node.nd_alen()); for (; node != null ; node = node.nd_next()) { ary.add(eval(self, node.nd_head())); } return RubyArray.m_newArray(getRuby(), ary); case NODE_STR: return ((RubyObject)node.nd_lit()).m_to_s(); case NODE_DSTR: case NODE_DXSTR: case NODE_DREGX: case NODE_DREGX_ONCE:/* NODE list = node.nd_next(); RubyString str = RubyString.m_newString(getRuby(), (RubyObject)node.nd_lit()); RubyString str2; while (list != null) { if (list.nd_head() != null) { switch (list.nd_head().nd_type()) { case NODE_STR: str2 = (RubyString)list.nd_head().nd_lit(); break; case NODE_EVSTR: result = ruby_errinfo; ruby_errinfo = Qnil; ruby_sourceline = nd_line(node); ruby_in_eval++; list.nd_head(compile(list.nd_head().nd_lit(), ruby_sourcefile,ruby_sourceline)); ruby_eval_tree = 0; ruby_in_eval--; if (ruby_nerrs > 0) { compile_error("string expansion"); } if (!NIL_P(result)) ruby_errinfo = result; /* fall through *//* default: str2 = (RubyString)rom.rb_obj_as_string(eval(list.nd_head())); break; } str.append(str2); str.infectObject(str2); } list = list.nd_next(); } switch (node.nd_type()) { case NODE_DREGX: return rom.rb_reg_new(str.getString(), str.getString().length(), node.nd_cflag()); case NODE_DREGX_ONCE: /* regexp expand once *//* VALUE result = rom.rb_reg_new(str.getString(), str.getString().length(), node.nd_cflag()); node.nd_set_type(NODE_LIT); node.nd_lit(result); return result; case NODE_DXSTR: return rom.rb_funcall(this, '`', 1, str); default: return str; }*/ return null; case NODE_XSTR: return self.funcall(getRuby().intern("`"), (RubyObject)node.nd_lit()); case NODE_LIT: return (RubyObject)node.nd_lit(); case NODE_ATTRSET: if (rubyFrame.getArgs().size() != 1) { throw new RubyArgumentException("wrong # of arguments(" + rubyFrame.getArgs().size() + "for 1)"); } return self.setInstanceVar((RubyId)node.nd_vid(), (RubyObject)rubyFrame.getArgs().get(0)); case NODE_DEFN: if (node.nd_defn() != null) { int noex; if (ruby_class == null) { throw new RubyTypeException("no class to add method"); } //if (ruby_class == getRuby().getObjectClass() && node.nd_mid() == init) { // rom.rb_warn("redefining Object#initialize may cause infinite loop"); //} //if (node.nd_mid() == __id__ || node.nd_mid() == __send__) { // rom.rb_warn("redefining `%s' may cause serious problem", ((RubyId)node.nd_mid()).toName()); //} // ruby_class.setFrozen(true); NODE body = ruby_class.searchMethod((RubyId)node.nd_mid()); RubyObject origin = ruby_class.getMethodOrigin((RubyId)node.nd_mid()); if (body != null){ // if (ruby_verbose.isTrue() && ruby_class == origin && body.nd_cnt() == 0) { // rom.rb_warning("discarding old %s", ((RubyId)node.nd_mid()).toName()); // } // if (node.nd_noex() != 0) { /* toplevel */ /* should upgrade to rb_warn() if no super was called inside? */ // rom.rb_warning("overriding global function `%s'", ((RubyId)node.nd_mid()).toName()); // } } if (isScope(SCOPE_PRIVATE) || node.nd_mid().equals(ruby.intern("initialize"))) { noex = NOEX_PRIVATE; } else if (isScope(SCOPE_PROTECTED)) { noex = NOEX_PROTECTED; } else if (ruby_class == getRuby().getObjectClass()) { noex = node.nd_noex(); } else { noex = NOEX_PUBLIC; } if (body != null && origin == ruby_class && (body.nd_noex() & NOEX_UNDEF) != 0) { noex |= NOEX_UNDEF; } NODE defn = node.nd_defn().copyNodeScope(ruby_cref); ruby_class.addMethod((RubyId)node.nd_mid(), defn, noex); // rb_clear_cache_by_id(node.nd_mid()); if (scope_vmode == SCOPE_MODFUNC) { ruby_class.getSingletonClass().addMethod((RubyId)node.nd_mid(), defn, NOEX_PUBLIC); ruby_class.funcall(getRuby().intern("singleton_method_added"), ((RubyId)node.nd_mid()).toSymbol()); } if (ruby_class.isSingleton()) { ruby_class.getInstanceVar("__attached__").funcall(getRuby().intern("singleton_method_added"), ((RubyId)node.nd_mid()).toSymbol()); } else { ruby_class.funcall(getRuby().intern("method_added"), ((RubyId)node.nd_mid()).toSymbol()); } } return getRuby().getNil(); case NODE_DEFS: if (node.nd_defn() != null) { recv = eval(self, node.nd_recv()); if (getRuby().getSecurityLevel() >= 4 && !recv.isTaint()) { throw new RubySecurityException("Insecure; can't define singleton method"); } /*if (FIXNUM_P(recv) || SYMBOL_P(recv)) { rb_raise(rb_eTypeError, "can't define singleton method \"%s\" for %s", rb_id2name(node.nd_mid()), rb_class2name(CLASS_OF(recv))); }*/ // not needed in jruby if (recv.isFrozen()) { throw new RubyFrozenException("object"); } rubyClass = recv.getSingletonClass(); NODE body = (NODE)rubyClass.getMethods().get((RubyId)node.nd_mid()); if (body != null) { if (getRuby().getSecurityLevel() >= 4) { throw new RubySecurityException("redefining method prohibited"); } /*if (RTEST(ruby_verbose)) { rb_warning("redefine %s", rb_id2name(node.nd_mid())); }*/ } NODE defn = node.nd_defn().copyNodeScope(ruby_cref); defn.nd_rval(ruby_cref); rubyClass.addMethod((RubyId)node.nd_mid(), defn, NOEX_PUBLIC | (body != null ? body.nd_noex() & NOEX_UNDEF : 0)); // rb_clear_cache_by_id(node.nd_mid()); recv.funcall(getRuby().intern("singleton_method_added"), ((RubyId)node.nd_mid()).toSymbol()); } return getRuby().getNil(); case NODE_UNDEF: if (ruby_class == null) { throw new RubyTypeException("no class to undef method"); } ruby_class.undef((RubyId)node.nd_mid()); return getRuby().getNil(); case NODE_ALIAS: if (ruby_class == null) { throw new RubyTypeException("no class to make alias"); } ruby_class.aliasMethod((RubyId)node.nd_new(), (RubyId)node.nd_old()); ruby_class.funcall(getRuby().intern("method_added"), ((RubyId)node.nd_mid()).toSymbol()); return getRuby().getNil(); case NODE_VALIAS: RubyGlobalEntry.getGlobalEntry((RubyId)node.nd_old()).alias((RubyId)node.nd_new()); return getRuby().getNil(); case NODE_CLASS: RubyModule superClass; if (ruby_class == null) { throw new RubyTypeException("no outer class/module"); } if (node.nd_super() != null) { superClass = getSuperClass(self, node.nd_super()); } else { superClass = null; } rubyClass = null; // if ((ruby_class == getRuby().getObjectClass()) && rb_autoload_defined(node.nd_cname())) { // rb_autoload_load(node.nd_cname()); // } if (ruby_class.isConstantDefined((RubyId)node.nd_cname())) { rubyClass = (RubyClass)ruby_class.getConstant((RubyId)node.nd_cname()); } if (rubyClass != null) { if (!rubyClass.isClass()) { throw new RubyTypeException(((RubyId)node.nd_cname()).toName() + " is not a class"); } if (superClass != null) { RubyModule tmp = rubyClass.getSuperClass(); if (tmp.isSingleton()) { tmp = tmp.getSuperClass(); } while (tmp.isIncluded()) { tmp = tmp.getSuperClass(); } if (tmp != superClass) { superClass = tmp; //goto override_class; if (superClass == null) { superClass = getRuby().getObjectClass(); } rubyClass = getRuby().defineClassId((RubyId)node.nd_cname(), (RubyClass)superClass); ruby_class.setConstant((RubyId)node.nd_cname(), rubyClass); rubyClass.setClassPath((RubyClass)ruby_class, ((RubyId)node.nd_cname()).toName()); // end goto } } if (getRuby().getSecurityLevel() >= 4) { throw new RubySecurityException("extending class prohibited"); } // rb_clear_cache(); } else { //override_class: if (superClass == null) { superClass = getRuby().getObjectClass(); } rubyClass = getRuby().defineClassId((RubyId)node.nd_cname(), (RubyClass)superClass); ruby_class.setConstant((RubyId)node.nd_cname(), rubyClass); rubyClass.setClassPath((RubyClass)ruby_class, ((RubyId)node.nd_cname()).toName()); } if (ruby_wrapper != null) { rubyClass.getSingletonClass().includeModule(ruby_wrapper); rubyClass.includeModule(ruby_wrapper); } return setupModule(rubyClass, node.nd_body()); case NODE_MODULE: if (ruby_class == null) { throw new RubyTypeException("no outer class/module"); } RubyModule module = null; if ((ruby_class == getRuby().getObjectClass()) && getRuby().isAutoloadDefined((RubyId)node.nd_cname())) { // getRuby().rb_autoload_load(node.nd_cname()); } if (ruby_class.isConstantDefined((RubyId)node.nd_cname())) { module = (RubyModule)ruby_class.getConstant((RubyId)node.nd_cname()); } if (module != null) { if (!(module instanceof RubyModule)) { throw new RubyTypeException(((RubyId)node.nd_cname()).toName() + " is not a module"); } if (getRuby().getSecurityLevel() >= 4) { throw new RubySecurityException("extending module prohibited"); } } else { module = getRuby().defineModuleId((RubyId)node.nd_cname()); ruby_class.setConstant((RubyId)node.nd_cname(), module); module.setClassPath(ruby_class, ((RubyId)node.nd_cname()).toName()); } if (ruby_wrapper != null) { module.getSingletonClass().includeModule(ruby_wrapper); module.includeModule(ruby_wrapper); } return setupModule(module, node.nd_body()); case NODE_SCLASS: rubyClass = (RubyClass)eval(self, node.nd_recv()); if (rubyClass.isSpecialConst()) { throw new RubyTypeException("no virtual class for " + rubyClass.getRubyClass().toName()); } if (getRuby().getSecurityLevel() >= 4 && !rubyClass.isTaint()) { throw new RubySecurityException("Insecure: can't extend object"); } if (rubyClass.getRubyClass().isSingleton()) { // rb_clear_cache(); } rubyClass = rubyClass.getSingletonClass(); if (ruby_wrapper != null) { rubyClass.getSingletonClass().includeModule(ruby_wrapper); rubyClass.includeModule(ruby_wrapper); } return setupModule(rubyClass, node.nd_body()); case NODE_DEFINED: // String buf; // String desc = is_defined(self, node.nd_head(), buf); // // if (desc) { // result = rb_str_new2(desc); // } else { // result = Qnil; // } case NODE_NEWLINE: // ruby_sourcefile = node.nd_file; // ruby_sourceline = node.nd_nth(); // if (trace_func) { // call_trace_func("line", ruby_sourcefile, ruby_sourceline, self, // ruby_frame.last_func(), // ruby_frame.last_class()); // } node = node.nd_next(); break; default: // rom.rb_bug("unknown node type %d", nd_type(node)); } } } | 47134 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47134/f220dcff8a7e427e32a7f1f1bc78f38876b83620/RubyInterpreter.java/buggy/org/jruby/interpreter/RubyInterpreter.java | [
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public Step createNameStep(int axis, String prefix, String localName) throws JaxenException { IterableAxis iter = getIterableAxis( axis ); return new DefaultNameStep( iter, prefix, localName, createPredicateSet()); } | 47970 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47970/a606244b1948c4585839126f02bfc0d4958ec2f1/DefaultXPathFactory.java/buggy/src/java/main/org/jaxen/expr/DefaultXPathFactory.java | [
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Group grpTicks = new Group( cmpContent, SWT.NONE ); | if ( bTicksEnabled ) | private void placeComponents( ) { // Layout for entire composite FillLayout flMain = new FillLayout( ); flMain.marginHeight = 4; flMain.marginWidth = 2; // Layout for content composite GridLayout glContent = new GridLayout( ); glContent.verticalSpacing = 5; glContent.horizontalSpacing = 5; glContent.marginHeight = 0; glContent.marginWidth = 0; glContent.numColumns = 2; // Layout for Ticks group GridLayout glTicks = new GridLayout( ); glTicks.marginHeight = 4; glTicks.marginWidth = 4; glTicks.verticalSpacing = 2; glTicks.horizontalSpacing = 5; glTicks.numColumns = 2; this.setLayout( flMain ); // Content Composite cmpContent = new Composite( this, SWT.NONE ); cmpContent.setLayout( glContent ); // Grid Lines group if ( bLineGroupEnabled ) { // Layout for Grid Lines group FillLayout flLines = new FillLayout( ); flLines.marginHeight = 1; flLines.marginWidth = 1; cmpLines = new Composite( cmpContent, SWT.NONE ); GridData gdCMPLines = new GridData( GridData.FILL_BOTH ); gdCMPLines.horizontalSpan = 2; cmpLines.setLayoutData( gdCMPLines ); cmpLines.setLayout( flLines ); // Line Attributes for Grid Lines liacLines = new LineAttributesComposite( cmpLines, SWT.NONE, context, grid.getLineAttributes( ), true, true, true ); liacLines.addListener( this ); } // Ticks group (unsupported in 3D) boolean bTicksEnabled = this.context.getModel( ) .getDimension( ) .getValue( ) != ChartDimension.THREE_DIMENSIONAL; Group grpTicks = new Group( cmpContent, SWT.NONE ); { GridData gdGRPTicks = new GridData( GridData.FILL_BOTH ); gdGRPTicks.horizontalSpan = 2; grpTicks.setLayoutData( gdGRPTicks ); grpTicks.setLayout( glTicks ); grpTicks.setText( Messages.getString( "GridAttributesComposite.Lbl.Ticks" ) ); //$NON-NLS-1$ grpTicks.setEnabled( bTicksEnabled ); } // Line Attributes for Ticks liacTicks = new LineAttributesComposite( grpTicks, SWT.NONE, context, grid.getTickAttributes( ), false, false, true ); { GridData gdLIACTicks = new GridData( GridData.FILL_HORIZONTAL ); gdLIACTicks.horizontalSpan = 2; liacTicks.setLayoutData( gdLIACTicks ); liacTicks.addListener( this ); liacTicks.setEnabled( bTicksEnabled ); } // Tick Styles lblStyle = new Label( grpTicks, SWT.NONE ); { GridData gdLBLStyle = new GridData( ); gdLBLStyle.horizontalIndent = 4; lblStyle.setLayoutData( gdLBLStyle ); lblStyle.setText( Messages.getString( "GridAttributesComposite.Lbl.Style" ) ); //$NON-NLS-1$ lblStyle.setEnabled( bTicksEnabled && grid.getTickAttributes( ).isVisible( ) ); } cmbTickStyle = new Combo( grpTicks, SWT.DROP_DOWN | SWT.READ_ONLY ); { GridData gdCMBTickStyle = new GridData( GridData.FILL_HORIZONTAL ); cmbTickStyle.setLayoutData( gdCMBTickStyle ); cmbTickStyle.addSelectionListener( this ); cmbTickStyle.setEnabled( bTicksEnabled && grid.getTickAttributes( ).isVisible( ) ); } populateLists( ); setDefaultSelections( ); } | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/4bcf1aebed92b2c700d3ad7f8e0666f7fe9675a2/GridAttributesComposite.java/buggy/chart/org.eclipse.birt.chart.ui.extension/src/org/eclipse/birt/chart/ui/swt/composites/GridAttributesComposite.java | [
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