repo stringlengths 1 191 ⌀ | file stringlengths 23 351 | code stringlengths 0 5.32M | file_length int64 0 5.32M | avg_line_length float64 0 2.9k | max_line_length int64 0 288k | extension_type stringclasses 1
value |
|---|---|---|---|---|---|---|
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/LogisticRegression.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import org.opencv.core.Mat;
import org.opencv.core.TermCriteria;
// C++: class LogisticRegression
//javadoc: LogisticRegression
public class LogisticRegression extends StatModel {
protected LogisticRegression(long addr) { super... | 6,738 | 21.388704 | 117 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/NormalBayesClassifier.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import org.opencv.core.Mat;
// C++: class NormalBayesClassifier
//javadoc: NormalBayesClassifier
public class NormalBayesClassifier extends StatModel {
protected NormalBayesClassifier(long addr) { super(addr); }
//
//... | 2,041 | 27.760563 | 148 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/SVM.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import org.opencv.core.Mat;
import org.opencv.core.TermCriteria;
// C++: class SVM
//javadoc: SVM
public class SVM extends StatModel {
protected SVM(long addr) { super(addr); }
public static final int
C_SVC = ... | 8,969 | 18.628009 | 122 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/Ml.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
public class Ml {
public static final int
VAR_NUMERICAL = 0,
VAR_ORDERED = 0,
VAR_CATEGORICAL = 1,
TEST_ERROR = 0,
TRAIN_ERROR = 1,
ROW_SAMPLE = 0,
... | 348 | 13.541667 | 55 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/EM.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.TermCriteria;
import org.opencv.utils.Converters;
// C++: class EM
//javadoc: EM
public class EM extends StatModel {
protecte... | 8,530 | 26.342949 | 229 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/TrainData.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import org.opencv.core.Mat;
// C++: class TrainData
//javadoc: TrainData
public class TrainData {
protected final long nativeObj;
protected TrainData(long addr) { nativeObj = addr; }
//
// C++: Mat getCatMap()
... | 14,123 | 20.965785 | 170 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/StatModel.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import org.opencv.core.Algorithm;
import org.opencv.core.Mat;
// C++: class StatModel
//javadoc: StatModel
public class StatModel extends Algorithm {
protected StatModel(long addr) { super(addr); }
public static final int... | 3,566 | 21.15528 | 120 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/KNearest.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import org.opencv.core.Mat;
// C++: class KNearest
//javadoc: KNearest
public class KNearest extends StatModel {
protected KNearest(long addr) { super(addr); }
public static final int
BRUTE_FORCE = 1,
... | 4,680 | 21.080189 | 172 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/ANN_MLP.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import org.opencv.core.Mat;
import org.opencv.core.TermCriteria;
// C++: class ANN_MLP
//javadoc: ANN_MLP
public class ANN_MLP extends StatModel {
protected ANN_MLP(long addr) { super(addr); }
public static final int
... | 10,091 | 21.426667 | 117 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/ml/DTrees.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.ml;
import org.opencv.core.Mat;
// C++: class DTrees
//javadoc: DTrees
public class DTrees extends StatModel {
protected DTrees(long addr) { super(addr); }
public static final int
PREDICT_AUTO = 0,
PRE... | 7,203 | 19.179272 | 84 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/CameraRenderer.java | package org.opencv.android;
import java.io.IOException;
import java.util.List;
import android.annotation.TargetApi;
import android.hardware.Camera;
import android.hardware.Camera.Size;
import android.os.Build;
import android.util.Log;
@TargetApi(15)
@SuppressWarnings("deprecation")
public class CameraRenderer extend... | 6,735 | 39.578313 | 116 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/OpenCVLoader.java | package org.opencv.android;
import android.content.Context;
/**
* Helper class provides common initialization methods for OpenCV library.
*/
public class OpenCVLoader
{
/**
* OpenCV Library version 2.4.2.
*/
public static final String OPENCV_VERSION_2_4_2 = "2.4.2";
/**
* OpenCV Library ... | 2,920 | 27.359223 | 139 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/JavaCameraView.java | package org.opencv.android;
import java.util.List;
import android.content.Context;
import android.graphics.ImageFormat;
import android.graphics.SurfaceTexture;
import android.hardware.Camera;
import android.hardware.Camera.PreviewCallback;
import android.os.Build;
import android.util.AttributeSet;
import android.util... | 13,499 | 36.815126 | 142 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/CameraGLSurfaceView.java | package org.opencv.android;
import org.opencv.R;
import android.content.Context;
import android.content.res.TypedArray;
import android.opengl.GLSurfaceView;
import android.util.AttributeSet;
import android.util.Log;
import android.view.SurfaceHolder;
public class CameraGLSurfaceView extends GLSurfaceView {
priv... | 3,771 | 30.433333 | 110 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/Utils.java | package org.opencv.android;
import android.content.Context;
import android.graphics.Bitmap;
import org.opencv.core.CvException;
import org.opencv.core.CvType;
import org.opencv.core.Mat;
import org.opencv.imgcodecs.Imgcodecs;
import java.io.ByteArrayOutputStream;
import java.io.File;
import java.io.FileOutputStream;... | 5,858 | 40.85 | 231 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/AsyncServiceHelper.java | package org.opencv.android;
import java.io.File;
import java.util.StringTokenizer;
import org.opencv.core.Core;
import org.opencv.engine.OpenCVEngineInterface;
import android.content.ComponentName;
import android.content.Context;
import android.content.Intent;
import android.content.ServiceConnection;
import android... | 17,921 | 44.719388 | 124 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/CameraGLRendererBase.java | package org.opencv.android;
import java.nio.ByteBuffer;
import java.nio.ByteOrder;
import java.nio.FloatBuffer;
import javax.microedition.khronos.egl.EGLConfig;
import javax.microedition.khronos.opengles.GL10;
import org.opencv.android.CameraGLSurfaceView.CameraTextureListener;
import android.annotation.TargetApi;
... | 16,179 | 35.689342 | 134 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/FpsMeter.java | package org.opencv.android;
import java.text.DecimalFormat;
import org.opencv.core.Core;
import android.graphics.Canvas;
import android.graphics.Color;
import android.graphics.Paint;
import android.util.Log;
public class FpsMeter {
private static final String TAG = "FpsMeter";
private static f... | 2,044 | 29.522388 | 122 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/LoaderCallbackInterface.java | package org.opencv.android;
/**
* Interface for callback object in case of asynchronous initialization of OpenCV.
*/
public interface LoaderCallbackInterface
{
/**
* OpenCV initialization finished successfully.
*/
static final int SUCCESS = 0;
/**
* Google Play Market cannot be invoked.
... | 1,284 | 30.341463 | 115 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/Camera2Renderer.java | package org.opencv.android;
import java.util.Arrays;
import java.util.concurrent.Semaphore;
import java.util.concurrent.TimeUnit;
import android.annotation.TargetApi;
import android.content.Context;
import android.graphics.SurfaceTexture;
import android.hardware.camera2.CameraAccessException;
import android.hardware.c... | 12,001 | 38.610561 | 142 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/StaticHelper.java | package org.opencv.android;
import org.opencv.core.Core;
import java.util.StringTokenizer;
import android.util.Log;
class StaticHelper {
public static boolean initOpenCV(boolean InitCuda)
{
boolean result;
String libs = "";
if(InitCuda)
{
loadLibrary("cudart");
... | 2,625 | 24.009524 | 76 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/InstallCallbackInterface.java | package org.opencv.android;
/**
* Installation callback interface.
*/
public interface InstallCallbackInterface
{
/**
* New package installation is required.
*/
static final int NEW_INSTALLATION = 0;
/**
* Current package installation is in progress.
*/
static final int INSTALLATI... | 701 | 19.057143 | 51 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/BaseLoaderCallback.java | package org.opencv.android;
import android.app.Activity;
import android.app.AlertDialog;
import android.content.Context;
import android.content.DialogInterface;
import android.content.DialogInterface.OnClickListener;
import android.util.Log;
/**
* Basic implementation of LoaderCallbackInterface.
*/
public abstract ... | 6,172 | 42.471831 | 140 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/android/CameraBridgeViewBase.java | package org.opencv.android;
import java.util.List;
import org.opencv.R;
import org.opencv.core.Mat;
import org.opencv.core.Size;
import android.app.Activity;
import android.app.AlertDialog;
import android.content.Context;
import android.content.DialogInterface;
import android.content.res.TypedArray;
import android.g... | 18,173 | 35.789474 | 133 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/imgcodecs/Imgcodecs.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.imgcodecs;
import java.lang.String;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfByte;
import org.opencv.core.MatOfInt;
import org.opencv.utils.Converters;
public class Imgco... | 6,483 | 31.42 | 128 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/utils/Converters.java | package org.opencv.utils;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.CvType;
import org.opencv.core.Mat;
import org.opencv.core.MatOfByte;
import org.opencv.core.MatOfDMatch;
import org.opencv.core.MatOfKeyPoint;
import org.opencv.core.MatOfPoint;
import org.opencv.core.MatOfPoint2f;
im... | 24,826 | 32.686567 | 128 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/calib3d/Calib3d.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.calib3d;
import java.util.ArrayList;
import java.util.List;
import org.opencv.core.Mat;
import org.opencv.core.MatOfDouble;
import org.opencv.core.MatOfPoint2f;
import org.opencv.core.MatOfPoint3f;
import org.opencv.core.Point;
import or... | 84,828 | 59.722262 | 655 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/calib3d/StereoSGBM.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.calib3d;
// C++: class StereoSGBM
//javadoc: StereoSGBM
public class StereoSGBM extends StereoMatcher {
protected StereoSGBM(long addr) { super(addr); }
public static final int
MODE_SGBM = 0,
MODE_HH ... | 5,657 | 23.6 | 270 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/calib3d/StereoBM.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.calib3d;
import org.opencv.core.Rect;
// C++: class StereoBM
//javadoc: StereoBM
public class StereoBM extends StereoMatcher {
protected StereoBM(long addr) { super(addr); }
public static final int
PREFILTER_NORMA... | 7,376 | 21.287009 | 114 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/calib3d/StereoMatcher.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.calib3d;
import org.opencv.core.Algorithm;
import org.opencv.core.Mat;
// C++: class StereoMatcher
//javadoc: StereoMatcher
public class StereoMatcher extends Algorithm {
protected StereoMatcher(long addr) { super(addr); }
pu... | 5,753 | 21.653543 | 126 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/videoio/VideoWriter.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.videoio;
import java.lang.String;
import org.opencv.core.Mat;
import org.opencv.core.Size;
// C++: class VideoWriter
//javadoc: VideoWriter
public class VideoWriter {
protected final long nativeObj;
protected VideoWriter(long a... | 5,237 | 24.802956 | 164 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/videoio/VideoCapture.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.videoio;
import java.lang.String;
import org.opencv.core.Mat;
// C++: class VideoCapture
//javadoc: VideoCapture
public class VideoCapture {
protected final long nativeObj;
protected VideoCapture(long addr) { nativeObj = addr; ... | 5,828 | 20.043321 | 93 | java |
self | self-master/lib/opencv/android/sdk/java/src/org/opencv/videoio/Videoio.java |
//
// This file is auto-generated. Please don't modify it!
//
package org.opencv.videoio;
public class Videoio {
public static final int
CV_CAP_MSMF = 1400,
CV_CAP_ANDROID = 1000,
CV_CAP_ANDROID_BACK = CV_CAP_ANDROID+99,
CV_CAP_ANDROID_FRONT = CV_CAP_ANDROID+98,
... | 19,298 | 43.881395 | 112 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/CRC.java | // SevenZip/CRC.java
package SevenZip;
public class CRC
{
static public int[] Table = new int[256];
static
{
for (int i = 0; i < 256; i++)
{
int r = i;
for (int j = 0; j < 8; j++)
if ((r & 1) != 0)
r = (r >>> 1) ^ 0xEDB88320;
else
r >>>= 1;
Table[i] = r;
}
}
int _value = -1;
... | 847 | 15 | 71 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/ICodeProgress.java | package SevenZip;
public interface ICodeProgress
{
public void SetProgress(long inSize, long outSize);
}
| 107 | 14.428571 | 52 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/LzmaAlone.java | package SevenZip;
public class LzmaAlone
{
static public class CommandLine
{
public static final int kEncode = 0;
public static final int kDecode = 1;
public static final int kBenchmak = 2;
public int Command = -1;
public int NumBenchmarkPasses = 10;
public int DictionarySize = 1 << 23;
public bo... | 6,695 | 25.362205 | 116 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/LzmaBench.java | package SevenZip;
import java.io.ByteArrayOutputStream;
import java.io.ByteArrayInputStream;
import java.io.IOException;
public class LzmaBench
{
static final int kAdditionalSize = (1 << 21);
static final int kCompressedAdditionalSize = (1 << 10);
static class CRandomGenerator
{
int A1;
int A2;
public CRa... | 9,483 | 23.132316 | 88 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZ/OutWindow.java | // LZ.OutWindow
package SevenZip.Compression.LZ;
import java.io.IOException;
public class OutWindow
{
byte[] _buffer;
int _pos;
int _windowSize = 0;
int _streamPos;
java.io.OutputStream _stream;
public void Create(int windowSize)
{
if (_buffer == null || _windowSize != windowSize)
_buffer = new byte[wi... | 1,456 | 15.94186 | 70 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZ/BinTree.java | // LZ.BinTree
package SevenZip.Compression.LZ;
import java.io.IOException;
public class BinTree extends InWindow
{
int _cyclicBufferPos;
int _cyclicBufferSize = 0;
int _matchMaxLen;
int[] _son;
int[] _hash;
int _cutValue = 0xFF;
int _hashMask;
int _hashSizeSum = 0;
boolean HASH_ARRAY = true;
static ... | 8,800 | 21.979112 | 102 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZ/InWindow.java | // LZ.InWindow
package SevenZip.Compression.LZ;
import java.io.IOException;
public class InWindow
{
public byte[] _bufferBase; // pointer to buffer with data
java.io.InputStream _stream;
int _posLimit; // offset (from _buffer) of first byte when new block reading must be done
boolean _streamEndWasReached; // if... | 3,595 | 26.242424 | 91 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/BitTreeDecoder.java | package SevenZip.Compression.RangeCoder;
public class BitTreeDecoder
{
short[] Models;
int NumBitLevels;
public BitTreeDecoder(int numBitLevels)
{
NumBitLevels = numBitLevels;
Models = new short[1 << numBitLevels];
}
public void Init()
{
Decoder.InitBitModels(Models);
}
public int Decode(Decoder r... | 1,216 | 20.732143 | 74 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/Decoder.java | package SevenZip.Compression.RangeCoder;
import java.io.IOException;
public class Decoder
{
static final int kTopMask = ~((1 << 24) - 1);
static final int kNumBitModelTotalBits = 11;
static final int kBitModelTotal = (1 << kNumBitModelTotalBits);
static final int kNumMoveBits = 5;
int Range;
int Code;
java... | 1,828 | 19.550562 | 77 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/BitTreeEncoder.java | package SevenZip.Compression.RangeCoder;
import java.io.IOException;
public class BitTreeEncoder
{
short[] Models;
int NumBitLevels;
public BitTreeEncoder(int numBitLevels)
{
NumBitLevels = numBitLevels;
Models = new short[1 << numBitLevels];
}
public void Init()
{
Decoder.InitBitModels(Models);
}
... | 2,034 | 19.35 | 79 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/Encoder.java | package SevenZip.Compression.RangeCoder;
import java.io.IOException;
public class Encoder
{
static final int kTopMask = ~((1 << 24) - 1);
static final int kNumBitModelTotalBits = 11;
static final int kBitModelTotal = (1 << kNumBitModelTotalBits);
static final int kNumMoveBits = 5;
java.io.OutputStream Stream;... | 3,087 | 19.315789 | 103 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZMA/Base.java | // Base.java
package SevenZip.Compression.LZMA;
public class Base
{
public static final int kNumRepDistances = 4;
public static final int kNumStates = 12;
public static final int StateInit()
{
return 0;
}
public static final int StateUpdateChar(int index)
{
if (index < 4)
return 0;
if (index < 10... | 2,609 | 28.325843 | 89 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZMA/Decoder.java | package SevenZip.Compression.LZMA;
import SevenZip.Compression.RangeCoder.BitTreeDecoder;
import SevenZip.Compression.LZMA.Base;
import SevenZip.Compression.LZ.OutWindow;
import java.io.IOException;
public class Decoder
{
class LenDecoder
{
short[] m_Choice = new short[2];
BitTreeDecoder[] m_LowCoder = new BitT... | 9,677 | 28.327273 | 123 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs_large/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZMA/Encoder.java | package SevenZip.Compression.LZMA;
import SevenZip.Compression.RangeCoder.BitTreeEncoder;
import SevenZip.Compression.LZMA.Base;
import SevenZip.Compression.LZ.BinTree;
import SevenZip.ICodeProgress;
import java.io.IOException;
public class Encoder
{
public static final int EMatchFinderTypeBT2 = 0;
public static fi... | 40,845 | 27.825688 | 164 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/CRC.java | // SevenZip/CRC.java
package SevenZip;
public class CRC
{
static public int[] Table = new int[256];
static
{
for (int i = 0; i < 256; i++)
{
int r = i;
for (int j = 0; j < 8; j++)
if ((r & 1) != 0)
r = (r >>> 1) ^ 0xEDB88320;
else
r >>>= 1;
Table[i] = r;
}
}
int _value = -1;
... | 847 | 15 | 71 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/ICodeProgress.java | package SevenZip;
public interface ICodeProgress
{
public void SetProgress(long inSize, long outSize);
}
| 107 | 14.428571 | 52 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/LzmaAlone.java | package SevenZip;
public class LzmaAlone
{
static public class CommandLine
{
public static final int kEncode = 0;
public static final int kDecode = 1;
public static final int kBenchmak = 2;
public int Command = -1;
public int NumBenchmarkPasses = 10;
public int DictionarySize = 1 << 23;
public bo... | 6,695 | 25.362205 | 116 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/LzmaBench.java | package SevenZip;
import java.io.ByteArrayOutputStream;
import java.io.ByteArrayInputStream;
import java.io.IOException;
public class LzmaBench
{
static final int kAdditionalSize = (1 << 21);
static final int kCompressedAdditionalSize = (1 << 10);
static class CRandomGenerator
{
int A1;
int A2;
public CRa... | 9,483 | 23.132316 | 88 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZ/OutWindow.java | // LZ.OutWindow
package SevenZip.Compression.LZ;
import java.io.IOException;
public class OutWindow
{
byte[] _buffer;
int _pos;
int _windowSize = 0;
int _streamPos;
java.io.OutputStream _stream;
public void Create(int windowSize)
{
if (_buffer == null || _windowSize != windowSize)
_buffer = new byte[wi... | 1,456 | 15.94186 | 70 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZ/BinTree.java | // LZ.BinTree
package SevenZip.Compression.LZ;
import java.io.IOException;
public class BinTree extends InWindow
{
int _cyclicBufferPos;
int _cyclicBufferSize = 0;
int _matchMaxLen;
int[] _son;
int[] _hash;
int _cutValue = 0xFF;
int _hashMask;
int _hashSizeSum = 0;
boolean HASH_ARRAY = true;
static ... | 8,800 | 21.979112 | 102 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZ/InWindow.java | // LZ.InWindow
package SevenZip.Compression.LZ;
import java.io.IOException;
public class InWindow
{
public byte[] _bufferBase; // pointer to buffer with data
java.io.InputStream _stream;
int _posLimit; // offset (from _buffer) of first byte when new block reading must be done
boolean _streamEndWasReached; // if... | 3,595 | 26.242424 | 91 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/BitTreeDecoder.java | package SevenZip.Compression.RangeCoder;
public class BitTreeDecoder
{
short[] Models;
int NumBitLevels;
public BitTreeDecoder(int numBitLevels)
{
NumBitLevels = numBitLevels;
Models = new short[1 << numBitLevels];
}
public void Init()
{
Decoder.InitBitModels(Models);
}
public int Decode(Decoder r... | 1,216 | 20.732143 | 74 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/Decoder.java | package SevenZip.Compression.RangeCoder;
import java.io.IOException;
public class Decoder
{
static final int kTopMask = ~((1 << 24) - 1);
static final int kNumBitModelTotalBits = 11;
static final int kBitModelTotal = (1 << kNumBitModelTotalBits);
static final int kNumMoveBits = 5;
int Range;
int Code;
java... | 1,828 | 19.550562 | 77 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/BitTreeEncoder.java | package SevenZip.Compression.RangeCoder;
import java.io.IOException;
public class BitTreeEncoder
{
short[] Models;
int NumBitLevels;
public BitTreeEncoder(int numBitLevels)
{
NumBitLevels = numBitLevels;
Models = new short[1 << numBitLevels];
}
public void Init()
{
Decoder.InitBitModels(Models);
}
... | 2,034 | 19.35 | 79 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/Encoder.java | package SevenZip.Compression.RangeCoder;
import java.io.IOException;
public class Encoder
{
static final int kTopMask = ~((1 << 24) - 1);
static final int kNumBitModelTotalBits = 11;
static final int kBitModelTotal = (1 << kNumBitModelTotalBits);
static final int kNumMoveBits = 5;
java.io.OutputStream Stream;... | 3,087 | 19.315789 | 103 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZMA/Base.java | // Base.java
package SevenZip.Compression.LZMA;
public class Base
{
public static final int kNumRepDistances = 4;
public static final int kNumStates = 12;
public static final int StateInit()
{
return 0;
}
public static final int StateUpdateChar(int index)
{
if (index < 4)
return 0;
if (index < 10... | 2,609 | 28.325843 | 89 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZMA/Decoder.java | package SevenZip.Compression.LZMA;
import SevenZip.Compression.RangeCoder.BitTreeDecoder;
import SevenZip.Compression.LZMA.Base;
import SevenZip.Compression.LZ.OutWindow;
import java.io.IOException;
public class Decoder
{
class LenDecoder
{
short[] m_Choice = new short[2];
BitTreeDecoder[] m_LowCoder = new BitT... | 9,677 | 28.327273 | 123 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/NOPOS/II_docs/ilists.imp/6.vbyteP7zip_acabadoMerge2yN[Fork]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZMA/Encoder.java | package SevenZip.Compression.LZMA;
import SevenZip.Compression.RangeCoder.BitTreeEncoder;
import SevenZip.Compression.LZMA.Base;
import SevenZip.Compression.LZ.BinTree;
import SevenZip.ICodeProgress;
import java.io.IOException;
public class Encoder
{
public static final int EMatchFinderTypeBT2 = 0;
public static fi... | 40,845 | 27.825688 | 164 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/CRC.java | // SevenZip/CRC.java
package SevenZip;
public class CRC
{
static public int[] Table = new int[256];
static
{
for (int i = 0; i < 256; i++)
{
int r = i;
for (int j = 0; j < 8; j++)
if ((r & 1) != 0)
r = (r >>> 1) ^ 0xEDB88320;
else
r >>>= 1;
Table[i] = r;
}
}
int _value = -1;
... | 847 | 15 | 71 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/ICodeProgress.java | package SevenZip;
public interface ICodeProgress
{
public void SetProgress(long inSize, long outSize);
}
| 107 | 14.428571 | 52 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/LzmaAlone.java | package SevenZip;
public class LzmaAlone
{
static public class CommandLine
{
public static final int kEncode = 0;
public static final int kDecode = 1;
public static final int kBenchmak = 2;
public int Command = -1;
public int NumBenchmarkPasses = 10;
public int DictionarySize = 1 << 23;
public bo... | 6,695 | 25.362205 | 116 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/LzmaBench.java | package SevenZip;
import java.io.ByteArrayOutputStream;
import java.io.ByteArrayInputStream;
import java.io.IOException;
public class LzmaBench
{
static final int kAdditionalSize = (1 << 21);
static final int kCompressedAdditionalSize = (1 << 10);
static class CRandomGenerator
{
int A1;
int A2;
public CRa... | 9,483 | 23.132316 | 88 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZ/OutWindow.java | // LZ.OutWindow
package SevenZip.Compression.LZ;
import java.io.IOException;
public class OutWindow
{
byte[] _buffer;
int _pos;
int _windowSize = 0;
int _streamPos;
java.io.OutputStream _stream;
public void Create(int windowSize)
{
if (_buffer == null || _windowSize != windowSize)
_buffer = new byte[wi... | 1,456 | 15.94186 | 70 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZ/BinTree.java | // LZ.BinTree
package SevenZip.Compression.LZ;
import java.io.IOException;
public class BinTree extends InWindow
{
int _cyclicBufferPos;
int _cyclicBufferSize = 0;
int _matchMaxLen;
int[] _son;
int[] _hash;
int _cutValue = 0xFF;
int _hashMask;
int _hashSizeSum = 0;
boolean HASH_ARRAY = true;
static ... | 8,800 | 21.979112 | 102 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZ/InWindow.java | // LZ.InWindow
package SevenZip.Compression.LZ;
import java.io.IOException;
public class InWindow
{
public byte[] _bufferBase; // pointer to buffer with data
java.io.InputStream _stream;
int _posLimit; // offset (from _buffer) of first byte when new block reading must be done
boolean _streamEndWasReached; // if... | 3,595 | 26.242424 | 91 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/BitTreeDecoder.java | package SevenZip.Compression.RangeCoder;
public class BitTreeDecoder
{
short[] Models;
int NumBitLevels;
public BitTreeDecoder(int numBitLevels)
{
NumBitLevels = numBitLevels;
Models = new short[1 << numBitLevels];
}
public void Init()
{
Decoder.InitBitModels(Models);
}
public int Decode(Decoder r... | 1,216 | 20.732143 | 74 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/Decoder.java | package SevenZip.Compression.RangeCoder;
import java.io.IOException;
public class Decoder
{
static final int kTopMask = ~((1 << 24) - 1);
static final int kNumBitModelTotalBits = 11;
static final int kBitModelTotal = (1 << kNumBitModelTotalBits);
static final int kNumMoveBits = 5;
int Range;
int Code;
java... | 1,828 | 19.550562 | 77 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/BitTreeEncoder.java | package SevenZip.Compression.RangeCoder;
import java.io.IOException;
public class BitTreeEncoder
{
short[] Models;
int NumBitLevels;
public BitTreeEncoder(int numBitLevels)
{
NumBitLevels = numBitLevels;
Models = new short[1 << numBitLevels];
}
public void Init()
{
Decoder.InitBitModels(Models);
}
... | 2,034 | 19.35 | 79 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/RangeCoder/Encoder.java | package SevenZip.Compression.RangeCoder;
import java.io.IOException;
public class Encoder
{
static final int kTopMask = ~((1 << 24) - 1);
static final int kNumBitModelTotalBits = 11;
static final int kBitModelTotal = (1 << kNumBitModelTotalBits);
static final int kNumMoveBits = 5;
java.io.OutputStream Stream;... | 3,087 | 19.315789 | 103 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZMA/Base.java | // Base.java
package SevenZip.Compression.LZMA;
public class Base
{
public static final int kNumRepDistances = 4;
public static final int kNumStates = 12;
public static final int StateInit()
{
return 0;
}
public static final int StateUpdateChar(int index)
{
if (index < 4)
return 0;
if (index < 10... | 2,609 | 28.325843 | 89 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZMA/Decoder.java | package SevenZip.Compression.LZMA;
import SevenZip.Compression.RangeCoder.BitTreeDecoder;
import SevenZip.Compression.LZMA.Base;
import SevenZip.Compression.LZ.OutWindow;
import java.io.IOException;
public class Decoder
{
class LenDecoder
{
short[] m_Choice = new short[2];
BitTreeDecoder[] m_LowCoder = new BitT... | 9,677 | 28.327273 | 123 | java |
uiHRDC | uiHRDC-master/uiHRDC/indexes/POS/II_docs/ilists.gap.imp/6.vbyteP7zip_acabadoMerge2yN[Fork.log_enabled]/lzmalib/lzma.sourceCode/LZMAFARI_LIB/lzma465/Java/SevenZip/Compression/LZMA/Encoder.java | package SevenZip.Compression.LZMA;
import SevenZip.Compression.RangeCoder.BitTreeEncoder;
import SevenZip.Compression.LZMA.Base;
import SevenZip.Compression.LZ.BinTree;
import SevenZip.ICodeProgress;
import java.io.IOException;
public class Encoder
{
public static final int EMatchFinderTypeBT2 = 0;
public static fi... | 40,845 | 27.825688 | 164 | java |
cobs | cobs-master/cobs/cobsScripts/RocOnBigTable.java |
/**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* ... | 5,000 | 29.680982 | 115 | java |
cobs | cobs-master/cobs/cobsScripts/WriteOneDScores.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 4,767 | 27.380952 | 97 | java |
cobs | cobs-master/cobs/cobsScripts/AbsoluteScoreVsAverageDistance.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 4,767 | 27.722892 | 112 | java |
cobs | cobs-master/cobs/cobsScripts/WriteScores.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 16,229 | 28.296029 | 135 | java |
cobs | cobs-master/cobs/cobsScripts/ResultsFileLine.java |
/**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* ... | 9,016 | 23.84022 | 112 | java |
cobs | cobs-master/cobs/dynamicProgramming/PairedAlignment.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 818 | 34.608696 | 74 | java |
cobs | cobs-master/cobs/dynamicProgramming/SubstitutionMatrix.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 815 | 36.090909 | 74 | java |
cobs | cobs-master/cobs/dynamicProgramming/MaxhomSubstitutionMatrix.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 1,359 | 25.666667 | 74 | java |
cobs | cobs-master/cobs/dynamicProgramming/NeedlemanWunsch.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 6,973 | 23.556338 | 91 | java |
cobs | cobs-master/cobs/dynamicProgramming/DNASubstitutionMatrix.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 1,134 | 24.795455 | 74 | java |
cobs | cobs-master/cobs/test/TestSuite1.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 2,000 | 36.754717 | 74 | java |
cobs | cobs-master/cobs/test/AlignmentFilterTest.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 2,901 | 30.204301 | 74 | java |
cobs | cobs-master/cobs/test/AlignmentLineTest.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 1,829 | 29 | 74 | java |
cobs | cobs-master/cobs/test/TestUtils.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 2,454 | 26.58427 | 98 | java |
cobs | cobs-master/cobs/test/TestMcBascVsAbsoluteMcBASC.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 2,051 | 32.096774 | 108 | java |
cobs | cobs-master/cobs/test/TestAveragePDBDistance.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 4,927 | 30.388535 | 136 | java |
cobs | cobs-master/cobs/test/TestCobs.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 3,563 | 30.821429 | 112 | java |
cobs | cobs-master/cobs/test/TestConservationSum.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 3,540 | 27.328 | 93 | java |
cobs | cobs-master/cobs/test/AlignmentTest.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 8,332 | 28.44523 | 106 | java |
cobs | cobs-master/cobs/test/TestMi.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 6,710 | 30.507042 | 92 | java |
cobs | cobs-master/cobs/test/OmesCovarianceTest.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 5,640 | 35.869281 | 83 | java |
cobs | cobs-master/cobs/test/TestPNormalize.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 3,010 | 25.646018 | 116 | java |
cobs | cobs-master/cobs/test/EntropyConservationTest.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 3,440 | 29.451327 | 78 | java |
cobs | cobs-master/cobs/test/TestAbsoluteScoreVsAverageDistance.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 4,018 | 27.302817 | 131 | java |
cobs | cobs-master/cobs/test/TestMcBasc2.java | /**
* Authors: anthony.fodor@gmail.com kylekreth@alumni.nd.edu
*
* This code is free software; you can redistribute it and/or
* modify it under the terms of the GNU General Public License
* as published by the Free Software Foundation; either version 2
* of the License, or (at your option) any later version,
* p... | 2,908 | 38.310811 | 112 | java |
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