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jabref-main/src/main/java/org/jabref/logic/layout/format/IfPlural.java
package org.jabref.logic.layout.format; import java.util.List; import org.jabref.logic.layout.AbstractParamLayoutFormatter; /** * This formatter takes two arguments and examines the field text. * If the field text represents multiple individuals, that is it contains the string "and" * then the field text is repla...
1,416
29.804348
101
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/Iso690FormatDate.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.model.strings.StringUtil; public class Iso690FormatDate implements LayoutFormatter { @Override public String format(String s) { if (StringUtil.isBlank(s)) { return ""; } ...
1,110
37.310345
108
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/Iso690NamesAuthors.java
package org.jabref.logic.layout.format; import java.util.Locale; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.model.strings.StringUtil; public class Iso690NamesAuthors implements LayoutFormatter { @Override public String format(String s) { if (StringUtil.isBlank(s)) { ...
3,662
42.607143
122
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/JournalAbbreviator.java
package org.jabref.logic.layout.format; import java.util.Objects; import org.jabref.logic.journals.JournalAbbreviationRepository; import org.jabref.logic.layout.LayoutFormatter; /** * JournalAbbreviator formats the given text in an abbreviated form according to the journal abbreviation lists. * * The given input ...
1,047
35.137931
119
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/LastPage.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; /** * Formatter that returns the last page from the "pages" field, if set. * * For instance, if the pages field is set to "345-360" or "345--360", * this formatter will return "360". */ public class LastPage implements Layout...
695
23.857143
71
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/LatexToUnicodeFormatter.java
package org.jabref.logic.layout.format; import org.jabref.logic.cleanup.Formatter; import org.jabref.logic.l10n.Localization; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.model.strings.LatexToUnicodeAdapter; /** * This formatter converts LaTeX character sequences their equivalent unicode charact...
1,015
25.051282
89
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/MarkdownFormatter.java
package org.jabref.logic.layout.format; import java.util.Objects; import org.jabref.logic.layout.LayoutFormatter; import com.vladsch.flexmark.html.HtmlRenderer; import com.vladsch.flexmark.parser.Parser; import com.vladsch.flexmark.util.ast.Node; import com.vladsch.flexmark.util.data.MutableDataSet; public class Ma...
1,066
30.382353
101
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/NameFormatter.java
package org.jabref.logic.layout.format; import java.util.HashMap; import java.util.List; import java.util.Map; import java.util.Objects; import org.jabref.logic.bst.util.BstNameFormatter; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.model.entry.AuthorList; /** * This layout formatter uses the B...
5,823
31
126
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/NameFormatterPreferences.java
package org.jabref.logic.layout.format; import java.util.List; import javafx.collections.FXCollections; import javafx.collections.ObservableList; public class NameFormatterPreferences { private final ObservableList<String> nameFormatterKey; private final ObservableList<String> nameFormatterValue; publi...
1,075
28.888889
101
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/NoSpaceBetweenAbbreviations.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; /** * <p> * LayoutFormatter that removes the space between abbreviated First names * </p> * <p> * What out that this regular expression might also remove other spaces that fit the pattern. * </p> * <p> * Example: J. R. R. ...
923
26.176471
93
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/NotFoundFormatter.java
package org.jabref.logic.layout.format; import org.jabref.logic.l10n.Localization; import org.jabref.logic.layout.LayoutFormatter; /** * Formatter used to signal that a formatter hasn't been found. This can be * used for graceful degradation if a layout uses an undefined format. */ public class NotFoundFormatter i...
703
25.074074
95
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/Number.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.ParamLayoutFormatter; /** * Formatter that outputs a sequence number for the current entry. The sequence number is * tied to the entry's position in the order, not to the number of calls to this formatter. */ public class Number implements Para...
596
24.956522
91
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/Ordinal.java
package org.jabref.logic.layout.format; import java.util.regex.Matcher; import java.util.regex.Pattern; import org.jabref.logic.layout.LayoutFormatter; /** * Converts number to ordinal */ public class Ordinal implements LayoutFormatter { // Detect last digit in number not directly followed by a letter plus th...
1,151
27.8
87
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/RTFChars.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.logic.layout.StringInt; import org.jabref.logic.util.strings.RtfCharMap; import org.jabref.model.strings.StringUtil; import org.slf4j.Logger; import org.slf4j.LoggerFactory; /** * Transform a LaTeX-String to RT...
12,300
34.552023
124
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/RemoveBrackets.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; /** * Remove brackets formatter. * * <example> * "{Stefan Kolb}" -> "Stefan Kolb" * </example> */ public class RemoveBrackets implements LayoutFormatter { @Override public String format(String fieldText) { ...
581
22.28
70
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/RemoveBracketsAddComma.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; /** * Remove brackets formatter. */ public class RemoveBracketsAddComma implements LayoutFormatter { @Override public String format(String fieldText) { StringBuilder builder = new StringBuilder(fieldText.length()...
575
24.043478
70
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/RemoveLatexCommandsFormatter.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.model.strings.StringUtil; public class RemoveLatexCommandsFormatter implements LayoutFormatter { @Override public String format(String field) { StringBuilder cleanedField = new StringBuilder(); ...
3,472
45.306667
141
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/RemoveTilde.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; /** * Replace a non-command tilde ~ by a space. * <p> * Useful for formatting Latex code. */ public class RemoveTilde implements LayoutFormatter { @Override public String format(String fieldText) { StringBuilde...
875
26.375
76
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/RemoveWhitespace.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; /** * Remove non-printable character formatter. */ public class RemoveWhitespace implements LayoutFormatter { @Override public String format(String fieldEntry) { if (fieldEntry == null) { return null...
618
21.925926
73
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/Replace.java
package org.jabref.logic.layout.format; import java.util.List; import org.jabref.logic.layout.AbstractParamLayoutFormatter; /** * Formatter that does regexp replacement. * * To use this formatter, a two-part argument must be given. The parts are * separated by a comma. To indicate the comma character, use an esc...
1,981
32.033333
96
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/ReplaceUnicodeLigaturesFormatter.java
package org.jabref.logic.layout.format; import java.util.HashMap; import java.util.Map; import java.util.regex.Pattern; import org.jabref.logic.cleanup.Formatter; import org.jabref.logic.l10n.Localization; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.logic.util.strings.UnicodeLigaturesMap; publi...
1,456
26.490566
92
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/ReplaceWithEscapedDoubleQuotes.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; public class ReplaceWithEscapedDoubleQuotes implements LayoutFormatter { @Override public String format(String fieldText) { StringBuilder builder = new StringBuilder(fieldText.length()); for (char c : fiel...
535
25.8
72
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/RisAuthors.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.ParamLayoutFormatter; import org.jabref.logic.util.OS; import org.jabref.model.entry.AuthorList; public class RisAuthors implements ParamLayoutFormatter { private String arg = ""; @Override public String format(String s) { if...
871
24.647059
79
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/RisKeywords.java
package org.jabref.logic.layout.format; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.logic.util.OS; import org.jabref.model.entry.Keyword; import org.jabref.model.entry.KeywordList; public class RisKeywords implements LayoutFormatter { @Override public String format(String s) { i...
776
25.793103
57
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/RisMonth.java
package org.jabref.logic.layout.format; import java.util.Locale; import java.util.Optional; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.model.entry.Month; public class RisMonth implements LayoutFormatter { @Override public String format(String month) { if (month == null) { ...
527
24.142857
96
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/ShortMonthFormatter.java
package org.jabref.logic.layout.format; import java.util.Optional; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.model.entry.Month; public class ShortMonthFormatter implements LayoutFormatter { @Override public String format(String fieldText) { Optional<Month> month = Month.parse...
399
24
61
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/ToLowerCase.java
package org.jabref.logic.layout.format; import java.util.Locale; import org.jabref.logic.layout.LayoutFormatter; /** * Convert the contents to lower case. */ public class ToLowerCase implements LayoutFormatter { @Override public String format(String fieldText) { if (fieldText == null) { ...
404
19.25
53
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/ToUpperCase.java
package org.jabref.logic.layout.format; import java.util.Locale; import org.jabref.logic.layout.LayoutFormatter; /** * Convert the contents to upper case. */ public class ToUpperCase implements LayoutFormatter { @Override public String format(String fieldText) { if (fieldText == null) { ...
405
18.333333
53
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/WrapContent.java
package org.jabref.logic.layout.format; import java.util.List; import org.jabref.logic.layout.AbstractParamLayoutFormatter; /** * This formatter outputs the input value after adding a prefix and a postfix, * as long as the input value is non-empty. If the input value is empty, an * empty string is output (the pre...
1,265
26.521739
81
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/WrapFileLinks.java
package org.jabref.logic.layout.format; import java.nio.file.Path; import java.util.ArrayList; import java.util.Collections; import java.util.HashMap; import java.util.List; import java.util.Map; import org.jabref.logic.importer.util.FileFieldParser; import org.jabref.logic.layout.AbstractParamLayoutFormatter; import...
11,631
40.102473
123
java
null
jabref-main/src/main/java/org/jabref/logic/layout/format/XMLChars.java
package org.jabref.logic.layout.format; import java.util.HashMap; import java.util.Map; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.logic.util.strings.XmlCharsMap; /** * Changes {\^o} or {\^{o}} to ? */ public class XMLChars implements LayoutFormatter { private static final XmlCharsMap X...
3,370
31.728155
90
java
null
jabref-main/src/main/java/org/jabref/logic/logging/LogMessages.java
package org.jabref.logic.logging; import javafx.collections.FXCollections; import javafx.collections.ObservableList; import org.tinylog.core.LogEntry; /** * This class is used for storing and archiving all message output of JabRef as log events. * To listen to changes on the stored logs one can bind to the {@code ...
898
23.297297
91
java
null
jabref-main/src/main/java/org/jabref/logic/msbib/BibTeXConverter.java
package org.jabref.logic.msbib; import java.util.HashMap; import java.util.List; import java.util.Map; import java.util.Optional; import java.util.regex.Matcher; import java.util.regex.Pattern; import java.util.stream.Collectors; import org.jabref.model.entry.BibEntry; import org.jabref.model.entry.Month; import org....
5,474
40.165414
121
java
null
jabref-main/src/main/java/org/jabref/logic/msbib/MSBibConverter.java
package org.jabref.logic.msbib; import java.util.ArrayList; import java.util.List; import org.jabref.model.entry.Author; import org.jabref.model.entry.AuthorList; import org.jabref.model.entry.BibEntry; import org.jabref.model.entry.Month; import org.jabref.model.entry.field.Field; import org.jabref.model.entry.field...
6,910
46.013605
152
java
null
jabref-main/src/main/java/org/jabref/logic/msbib/MSBibDatabase.java
package org.jabref.logic.msbib; import java.io.BufferedReader; import java.io.IOException; import java.util.ArrayList; import java.util.Collections; import java.util.HashSet; import java.util.List; import java.util.Set; import javax.xml.parsers.DocumentBuilder; import javax.xml.parsers.DocumentBuilderFactory; import ...
4,873
33.814286
112
java
null
jabref-main/src/main/java/org/jabref/logic/msbib/MSBibEntry.java
package org.jabref.logic.msbib; import java.util.HashMap; import java.util.LinkedList; import java.util.List; import java.util.Map; import java.util.Optional; import java.util.regex.Matcher; import java.util.regex.Pattern; import org.jabref.model.entry.Author; import org.jabref.model.entry.AuthorList; import org.jabr...
15,021
39.820652
188
java
null
jabref-main/src/main/java/org/jabref/logic/msbib/MSBibEntryType.java
package org.jabref.logic.msbib; /** * This class represents all supported MSBib entry types. * <p> * Book, BookSection, JournalArticle, ArticleInAPeriodical, ConferenceProceedings, Report, * InternetSite, DocumentFromInternetSite, ElectronicSource, Art, SoundRecording, Performance, * Film, Interview, Patent, Case...
709
21.903226
94
java
null
jabref-main/src/main/java/org/jabref/logic/msbib/MSBibMapping.java
package org.jabref.logic.msbib; import java.util.HashMap; import java.util.Map; import org.jabref.model.entry.field.Field; import org.jabref.model.entry.field.InternalField; import org.jabref.model.entry.field.StandardField; import org.jabref.model.entry.field.UnknownField; import org.jabref.model.entry.types.EntryTy...
10,080
50.963918
150
java
null
jabref-main/src/main/java/org/jabref/logic/msbib/MsBibAuthor.java
package org.jabref.logic.msbib; import org.jabref.model.entry.Author; public class MsBibAuthor { private String firstName; private String middleName; private final Author author; private boolean isCorporate; public MsBibAuthor(Author author) { this.author = author; StringBuilder...
1,455
22.111111
60
java
null
jabref-main/src/main/java/org/jabref/logic/msbib/PageNumbers.java
package org.jabref.logic.msbib; import java.util.regex.Matcher; import java.util.regex.Pattern; import org.w3c.dom.Document; import org.w3c.dom.Element; import org.w3c.dom.Node; public class PageNumbers { private static final Pattern PAGE_PATTERN = Pattern.compile("\\s*(\\d+)\\s*-{1,2}\\s*(\\d+)\\s*"); priva...
1,754
28.25
102
java
null
jabref-main/src/main/java/org/jabref/logic/net/ProgressInputStream.java
package org.jabref.logic.net; import java.io.FilterInputStream; import java.io.IOException; import java.io.InputStream; import javafx.beans.property.LongProperty; import javafx.beans.property.SimpleLongProperty; /** * An input stream that keeps track of the amount of bytes already read. * Code based on http://stac...
2,269
24.505618
119
java
null
jabref-main/src/main/java/org/jabref/logic/net/ProxyAuthenticator.java
package org.jabref.logic.net; import java.net.Authenticator; import java.net.PasswordAuthentication; import java.util.Locale; public class ProxyAuthenticator extends Authenticator { @Override protected PasswordAuthentication getPasswordAuthentication() { if (getRequestorType() == RequestorType.PROXY)...
940
38.208333
112
java
null
jabref-main/src/main/java/org/jabref/logic/net/ProxyPreferences.java
package org.jabref.logic.net; import java.util.Objects; import javafx.beans.property.BooleanProperty; import javafx.beans.property.SimpleBooleanProperty; import javafx.beans.property.SimpleStringProperty; import javafx.beans.property.StringProperty; public class ProxyPreferences { private final BooleanProperty ...
4,471
28.421053
99
java
null
jabref-main/src/main/java/org/jabref/logic/net/ProxyRegisterer.java
package org.jabref.logic.net; public class ProxyRegisterer { private ProxyRegisterer() { } public static void register(ProxyPreferences proxyPrefs) { if (proxyPrefs.shouldUseProxy()) { // NetworkTabView.java ensures that proxyHostname and proxyPort are not null System.setP...
1,610
41.394737
106
java
null
jabref-main/src/main/java/org/jabref/logic/net/URLDownload.java
package org.jabref.logic.net; import java.io.BufferedInputStream; import java.io.BufferedReader; import java.io.ByteArrayInputStream; import java.io.DataOutputStream; import java.io.IOException; import java.io.InputStream; import java.io.InputStreamReader; import java.io.Reader; import java.io.StringWriter; import jav...
15,578
35.917062
159
java
null
jabref-main/src/main/java/org/jabref/logic/net/ssl/SSLCertificate.java
package org.jabref.logic.net.ssl; import java.io.FileInputStream; import java.io.FileNotFoundException; import java.nio.file.Path; import java.security.cert.CertificateEncodingException; import java.security.cert.CertificateException; import java.security.cert.CertificateFactory; import java.security.cert.X509Certific...
3,484
34.20202
163
java
null
jabref-main/src/main/java/org/jabref/logic/net/ssl/SSLPreferences.java
package org.jabref.logic.net.ssl; import javafx.beans.property.SimpleStringProperty; import javafx.beans.property.StringProperty; public class SSLPreferences { private final StringProperty truststorePath; public SSLPreferences(String truststorePath) { this.truststorePath = new SimpleStringProperty(tr...
523
23.952381
71
java
null
jabref-main/src/main/java/org/jabref/logic/net/ssl/TrustStoreManager.java
package org.jabref.logic.net.ssl; import java.io.FileInputStream; import java.io.FileOutputStream; import java.io.IOException; import java.net.URISyntaxException; import java.nio.file.Files; import java.nio.file.Path; import java.security.KeyStore; import java.security.KeyStoreException; import java.security.NoSuchAlg...
5,495
34.688312
125
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/NoDocumentFoundException.java
package org.jabref.logic.openoffice; public class NoDocumentFoundException extends Exception { public NoDocumentFoundException(String message) { super(message); } public NoDocumentFoundException() { super("No Writer documents found"); } }
274
20.153846
57
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/OpenOfficeFileSearch.java
package org.jabref.logic.openoffice; import java.io.IOException; import java.nio.file.Files; import java.nio.file.Path; import java.nio.file.attribute.BasicFileAttributes; import java.util.ArrayList; import java.util.Arrays; import java.util.Collections; import java.util.List; import java.util.Locale; import java.util...
3,390
37.101124
157
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/OpenOfficePreferences.java
package org.jabref.logic.openoffice; import java.util.List; import javafx.beans.property.BooleanProperty; import javafx.beans.property.SimpleBooleanProperty; import javafx.beans.property.SimpleStringProperty; import javafx.beans.property.StringProperty; import javafx.collections.FXCollections; import javafx.collectio...
3,761
29.836066
110
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/action/EditInsert.java
package org.jabref.logic.openoffice.action; import java.util.ArrayList; import java.util.Collections; import java.util.List; import java.util.Optional; import org.jabref.logic.openoffice.frontend.OOFrontend; import org.jabref.logic.openoffice.frontend.UpdateCitationMarkers; import org.jabref.logic.openoffice.style.OO...
4,445
37.66087
133
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/action/EditMerge.java
package org.jabref.logic.openoffice.action; import java.util.ArrayList; import java.util.List; import java.util.Objects; import java.util.Optional; import java.util.stream.Collectors; import org.jabref.logic.openoffice.frontend.OOFrontend; import org.jabref.logic.openoffice.frontend.UpdateCitationMarkers; import org....
12,962
37.465875
212
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/action/EditSeparate.java
package org.jabref.logic.openoffice.action; import java.util.List; import org.jabref.logic.openoffice.frontend.OOFrontend; import org.jabref.logic.openoffice.frontend.UpdateCitationMarkers; import org.jabref.logic.openoffice.style.OOBibStyle; import org.jabref.logic.openoffice.style.OOProcess; import org.jabref.model...
3,781
37.591837
90
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/action/ExportCited.java
package org.jabref.logic.openoffice.action; import java.util.ArrayList; import java.util.HashSet; import java.util.List; import java.util.Set; import org.jabref.logic.openoffice.frontend.OOFrontend; import org.jabref.model.database.BibDatabase; import org.jabref.model.entry.BibEntry; import org.jabref.model.entry.fie...
3,565
37.76087
191
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/action/ManageCitations.java
package org.jabref.logic.openoffice.action; import java.util.List; import org.jabref.logic.openoffice.frontend.OOFrontend; import org.jabref.model.openoffice.CitationEntry; import org.jabref.model.openoffice.uno.NoDocumentException; import com.sun.star.beans.IllegalTypeException; import com.sun.star.beans.PropertyVe...
1,182
30.131579
99
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/action/Update.java
package org.jabref.logic.openoffice.action; import java.util.List; import org.jabref.logic.openoffice.frontend.OOFrontend; import org.jabref.logic.openoffice.frontend.UpdateBibliography; import org.jabref.logic.openoffice.frontend.UpdateCitationMarkers; import org.jabref.logic.openoffice.style.OOBibStyle; import org....
4,701
34.621212
86
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/backend/Backend52.java
package org.jabref.logic.openoffice.backend; import java.util.ArrayList; import java.util.HashMap; import java.util.HashSet; import java.util.List; import java.util.Map; import java.util.Objects; import java.util.Optional; import java.util.Set; import java.util.stream.Collectors; import org.jabref.model.openoffice.Ci...
18,374
41.633411
195
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/backend/Codec52.java
package org.jabref.logic.openoffice.backend; import java.util.Arrays; import java.util.List; import java.util.Objects; import java.util.Optional; import java.util.Set; import java.util.regex.Matcher; import java.util.regex.Pattern; import java.util.stream.Collectors; import org.jabref.model.openoffice.style.CitationT...
4,871
34.304348
165
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/backend/GetContext.java
package org.jabref.logic.openoffice.backend; import com.sun.star.text.XTextCursor; import org.slf4j.Logger; import org.slf4j.LoggerFactory; /** * Utility methods for processing OO Writer documents. */ public class GetContext { private static final Logger LOGGER = LoggerFactory.getLogger(GetContext.class); ...
2,689
34.394737
106
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/backend/NamedRangeManagerReferenceMark.java
package org.jabref.logic.openoffice.backend; import java.util.List; import java.util.Optional; import org.jabref.model.openoffice.backend.NamedRange; import org.jabref.model.openoffice.backend.NamedRangeManager; import org.jabref.model.openoffice.uno.CreationException; import org.jabref.model.openoffice.uno.NoDocumen...
1,595
32.957447
109
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/backend/NamedRangeReferenceMark.java
package org.jabref.logic.openoffice.backend; import java.util.Optional; import org.jabref.model.openoffice.backend.NamedRange; import org.jabref.model.openoffice.uno.CreationException; import org.jabref.model.openoffice.uno.NoDocumentException; import org.jabref.model.openoffice.uno.UnoCursor; import org.jabref.model...
17,017
38.121839
155
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/frontend/OOFrontend.java
package org.jabref.logic.openoffice.frontend; import java.util.ArrayList; import java.util.HashMap; import java.util.List; import java.util.Map; import java.util.Objects; import java.util.Optional; import java.util.stream.Collectors; import org.jabref.logic.JabRefException; import org.jabref.logic.l10n.Localization; ...
22,748
43.431641
322
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/frontend/RangeForOverlapCheck.java
package org.jabref.logic.openoffice.frontend; import org.jabref.model.openoffice.rangesort.RangeHolder; import com.sun.star.text.XTextRange; /** * Describe a protected range for overlap checking and reporting. * <p> * To check that our protected ranges do not overlap, we collect these ranges. To check for overlap...
1,481
33.465116
258
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/frontend/UpdateBibliography.java
package org.jabref.logic.openoffice.frontend; import java.util.Optional; import org.jabref.logic.openoffice.style.OOBibStyle; import org.jabref.logic.openoffice.style.OOFormatBibliography; import org.jabref.model.openoffice.ootext.OOText; import org.jabref.model.openoffice.ootext.OOTextIntoOO; import org.jabref.model...
5,007
35.554745
100
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/frontend/UpdateCitationMarkers.java
package org.jabref.logic.openoffice.frontend; import java.util.List; import java.util.Objects; import java.util.Optional; import org.jabref.logic.openoffice.style.OOBibStyle; import org.jabref.model.openoffice.ootext.OOText; import org.jabref.model.openoffice.ootext.OOTextIntoOO; import org.jabref.model.openoffice.st...
5,697
39.992806
181
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/OOBibStyle.java
package org.jabref.logic.openoffice.style; import java.io.IOException; import java.io.InputStream; import java.io.InputStreamReader; import java.io.Reader; import java.io.StringReader; import java.nio.charset.StandardCharsets; import java.nio.file.Files; import java.nio.file.Path; import java.util.Collections; import ...
34,545
36.146237
163
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/OOBibStyleGetCitationMarker.java
package org.jabref.logic.openoffice.style; import java.util.ArrayList; import java.util.Collections; import java.util.List; import java.util.Objects; import java.util.Optional; import org.jabref.model.database.BibDatabase; import org.jabref.model.entry.Author; import org.jabref.model.entry.AuthorList; import org.jabr...
32,581
41.369311
119
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/OOBibStyleGetNumCitationMarker.java
package org.jabref.logic.openoffice.style; import java.util.ArrayList; import java.util.List; import java.util.Optional; import org.jabref.model.openoffice.ootext.OOText; import org.jabref.model.openoffice.style.CitationMarkerNumericBibEntry; import org.jabref.model.openoffice.style.CitationMarkerNumericEntry; import...
11,067
39.542125
116
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/OOFormatBibliography.java
package org.jabref.logic.openoffice.style; import java.util.ArrayList; import java.util.List; import java.util.Optional; import org.jabref.logic.l10n.Localization; import org.jabref.logic.layout.Layout; import org.jabref.model.database.BibDatabase; import org.jabref.model.entry.BibEntry; import org.jabref.model.entry...
8,319
40.809045
111
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/OOPreFormatter.java
package org.jabref.logic.openoffice.style; import java.util.Map; import java.util.Objects; import org.jabref.logic.layout.LayoutFormatter; import org.jabref.logic.util.strings.HTMLUnicodeConversionMaps; import org.jabref.model.strings.StringUtil; /** * This formatter preprocesses JabRef fields before they are run t...
8,187
48.624242
179
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/OOProcess.java
package org.jabref.logic.openoffice.style; import java.util.Comparator; import java.util.List; import org.jabref.logic.bibtex.comparator.FieldComparator; import org.jabref.logic.bibtex.comparator.FieldComparatorStack; import org.jabref.model.database.BibDatabase; import org.jabref.model.entry.BibEntry; import org.jab...
3,048
40.202703
125
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/OOProcessAuthorYearMarkers.java
package org.jabref.logic.openoffice.style; import java.util.ArrayList; import java.util.HashMap; import java.util.HashSet; import java.util.List; import java.util.Map; import java.util.Optional; import java.util.Set; import org.jabref.model.openoffice.ootext.OOText; import org.jabref.model.openoffice.style.Citation; ...
6,532
40.878205
115
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/OOProcessCitationKeyMarkers.java
package org.jabref.logic.openoffice.style; import java.util.Optional; import org.jabref.model.openoffice.ootext.OOText; import org.jabref.model.openoffice.style.Citation; import org.jabref.model.openoffice.style.CitationGroup; import org.jabref.model.openoffice.style.CitationGroups; import org.jabref.model.openoffice...
1,259
36.058824
110
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/OOProcessNumericMarkers.java
package org.jabref.logic.openoffice.style; import java.util.List; import java.util.Optional; import org.jabref.model.openoffice.ootext.OOText; import org.jabref.model.openoffice.style.CitationGroup; import org.jabref.model.openoffice.style.CitationGroups; import org.jabref.model.openoffice.style.CitationMarkerNumeric...
1,523
36.170732
112
java
null
jabref-main/src/main/java/org/jabref/logic/openoffice/style/StyleLoader.java
package org.jabref.logic.openoffice.style; import java.io.FileNotFoundException; import java.io.IOException; import java.nio.file.Path; import java.util.ArrayList; import java.util.Arrays; import java.util.List; import java.util.Objects; import org.jabref.logic.journals.JournalAbbreviationRepository; import org.jabre...
5,677
37.890411
121
java
null
jabref-main/src/main/java/org/jabref/logic/pdf/AnnotationImporter.java
package org.jabref.logic.pdf; import java.nio.file.Path; import java.util.List; import org.jabref.model.pdf.FileAnnotation; public interface AnnotationImporter { List<FileAnnotation> importAnnotations(final Path path); }
229
18.166667
60
java
null
jabref-main/src/main/java/org/jabref/logic/pdf/EntryAnnotationImporter.java
package org.jabref.logic.pdf; import java.nio.file.Path; import java.util.HashMap; import java.util.List; import java.util.Map; import java.util.stream.Collectors; import org.jabref.model.database.BibDatabaseContext; import org.jabref.model.entry.BibEntry; import org.jabref.model.entry.LinkedFile; import org.jabref.m...
2,103
35.275862
140
java
null
jabref-main/src/main/java/org/jabref/logic/pdf/FileAnnotationCache.java
package org.jabref.logic.pdf; import java.nio.file.Path; import java.util.List; import java.util.Map; import org.jabref.model.database.BibDatabaseContext; import org.jabref.model.entry.BibEntry; import org.jabref.model.pdf.FileAnnotation; import org.jabref.preferences.FilePreferences; import com.google.common.cache....
2,308
38.135593
144
java
null
jabref-main/src/main/java/org/jabref/logic/pdf/PdfAnnotationImporter.java
package org.jabref.logic.pdf; import java.io.IOException; import java.nio.file.Files; import java.nio.file.Path; import java.util.Arrays; import java.util.Collections; import java.util.LinkedList; import java.util.List; import java.util.Locale; import java.util.Objects; import java.util.Optional; import org.jabref.mo...
5,266
40.472441
164
java
null
jabref-main/src/main/java/org/jabref/logic/pdf/TextExtractor.java
package org.jabref.logic.pdf; import java.awt.geom.Rectangle2D; import java.io.IOException; import java.util.Objects; import org.jabref.architecture.AllowedToUseAwt; import org.apache.pdfbox.cos.COSArray; import org.apache.pdfbox.cos.COSFloat; import org.apache.pdfbox.cos.COSInteger; import org.apache.pdfbox.pdmodel...
3,664
39.722222
130
java
null
jabref-main/src/main/java/org/jabref/logic/pdf/search/indexing/DocumentReader.java
package org.jabref.logic.pdf.search.indexing; import java.io.IOException; import java.nio.file.Files; import java.nio.file.Path; import java.nio.file.attribute.BasicFileAttributes; import java.util.ArrayList; import java.util.List; import java.util.Optional; import java.util.concurrent.TimeUnit; import java.util.regex...
7,166
42.174699
181
java
null
jabref-main/src/main/java/org/jabref/logic/pdf/search/indexing/IndexingTaskManager.java
package org.jabref.logic.pdf.search.indexing; import java.util.List; import java.util.Queue; import java.util.Set; import java.util.concurrent.ConcurrentLinkedQueue; import org.jabref.gui.util.BackgroundTask; import org.jabref.gui.util.DefaultTaskExecutor; import org.jabref.gui.util.TaskExecutor; import org.jabref.lo...
4,433
33.372093
146
java
null
jabref-main/src/main/java/org/jabref/logic/pdf/search/indexing/PdfIndexer.java
package org.jabref.logic.pdf.search.indexing; import java.io.IOException; import java.nio.file.Files; import java.nio.file.Path; import java.nio.file.attribute.BasicFileAttributes; import java.util.HashSet; import java.util.List; import java.util.Optional; import java.util.Set; import java.util.concurrent.TimeUnit; i...
10,110
39.444
172
java
null
jabref-main/src/main/java/org/jabref/logic/pdf/search/retrieval/PdfSearcher.java
package org.jabref.logic.pdf.search.retrieval; import java.io.IOException; import java.util.LinkedList; import java.util.List; import java.util.Objects; import org.jabref.gui.LibraryTab; import org.jabref.model.database.BibDatabaseContext; import org.jabref.model.pdf.search.EnglishStemAnalyzer; import org.jabref.mode...
3,235
38.950617
111
java
null
jabref-main/src/main/java/org/jabref/logic/preferences/DOIPreferences.java
package org.jabref.logic.preferences; import javafx.beans.property.BooleanProperty; import javafx.beans.property.SimpleBooleanProperty; import javafx.beans.property.SimpleStringProperty; import javafx.beans.property.StringProperty; public class DOIPreferences { private BooleanProperty useCustom; private final...
1,108
26.04878
71
java
null
jabref-main/src/main/java/org/jabref/logic/preferences/FetcherApiKey.java
package org.jabref.logic.preferences; import javafx.beans.property.BooleanProperty; import javafx.beans.property.SimpleBooleanProperty; import javafx.beans.property.SimpleStringProperty; import javafx.beans.property.StringProperty; public class FetcherApiKey { private final StringProperty name; private final ...
1,117
22.787234
64
java
null
jabref-main/src/main/java/org/jabref/logic/preferences/OwnerPreferences.java
package org.jabref.logic.preferences; import javafx.beans.property.BooleanProperty; import javafx.beans.property.SimpleBooleanProperty; import javafx.beans.property.SimpleStringProperty; import javafx.beans.property.StringProperty; public class OwnerPreferences { private final BooleanProperty useOwner; privat...
1,592
26.947368
72
java
null
jabref-main/src/main/java/org/jabref/logic/preferences/TimestampPreferences.java
package org.jabref.logic.preferences; import java.time.LocalDateTime; import java.time.format.DateTimeFormatter; import java.time.temporal.ChronoUnit; import javafx.beans.property.BooleanProperty; import javafx.beans.property.SimpleBooleanProperty; import org.jabref.model.entry.field.Field; public class TimestampPr...
2,361
28.898734
154
java
null
jabref-main/src/main/java/org/jabref/logic/preview/PreviewLayout.java
package org.jabref.logic.preview; import java.util.Locale; import org.jabref.model.database.BibDatabaseContext; import org.jabref.model.entry.BibEntry; /** * Used for displaying a rendered entry in the UI. Due to historical reasons, "rendering" is called "layout". */ public interface PreviewLayout { String ge...
623
26.130435
109
java
null
jabref-main/src/main/java/org/jabref/logic/protectedterms/ProtectedTermsList.java
package org.jabref.logic.protectedterms; import java.io.BufferedWriter; import java.io.IOException; import java.nio.charset.StandardCharsets; import java.nio.file.Files; import java.nio.file.Path; import java.nio.file.StandardOpenOption; import java.util.List; import java.util.Objects; import org.jabref.logic.util.OS...
3,290
27.868421
113
java
null
jabref-main/src/main/java/org/jabref/logic/protectedterms/ProtectedTermsLoader.java
package org.jabref.logic.protectedterms; import java.nio.file.Files; import java.nio.file.Path; import java.util.ArrayList; import java.util.HashMap; import java.util.HashSet; import java.util.List; import java.util.Map; import java.util.Objects; import java.util.Set; import java.util.function.Supplier; import org.ja...
6,159
40.066667
139
java
null
jabref-main/src/main/java/org/jabref/logic/protectedterms/ProtectedTermsParser.java
package org.jabref.logic.protectedterms; import java.io.IOException; import java.net.URISyntaxException; import java.nio.charset.StandardCharsets; import java.nio.file.Files; import java.nio.file.Path; import java.util.ArrayList; import java.util.List; import java.util.Objects; import java.util.stream.Collectors; impo...
2,635
32.794872
146
java
null
jabref-main/src/main/java/org/jabref/logic/protectedterms/ProtectedTermsPreferences.java
package org.jabref.logic.protectedterms; import java.util.List; import javafx.collections.FXCollections; import javafx.collections.ObservableList; public class ProtectedTermsPreferences { private final ObservableList<String> enabledInternalTermLists; private final ObservableList<String> enabledExternalTermL...
2,297
36.672131
102
java
null
jabref-main/src/main/java/org/jabref/logic/remote/Protocol.java
package org.jabref.logic.remote; import java.io.IOException; import java.io.ObjectInputStream; import java.io.ObjectOutputStream; import java.net.Socket; import java.net.URLDecoder; import java.net.URLEncoder; import java.nio.charset.StandardCharsets; import javafx.util.Pair; import org.slf4j.Logger; import org.slf4...
3,325
30.67619
118
java
null
jabref-main/src/main/java/org/jabref/logic/remote/RemoteMessage.java
package org.jabref.logic.remote; public enum RemoteMessage { /** * Send command line arguments. The message content is of type {@code String[]}. */ SEND_COMMAND_LINE_ARGUMENTS, /** * As a response to {@link #PING}. The message content is an identifier of type {@code String}. */ PONG...
525
24.047619
99
java
null
jabref-main/src/main/java/org/jabref/logic/remote/RemotePreferences.java
package org.jabref.logic.remote; import java.net.InetAddress; import java.net.UnknownHostException; import javafx.beans.property.BooleanProperty; import javafx.beans.property.IntegerProperty; import javafx.beans.property.SimpleBooleanProperty; import javafx.beans.property.SimpleIntegerProperty; /** * Place for hand...
1,537
25.067797
74
java
null
jabref-main/src/main/java/org/jabref/logic/remote/RemoteUtil.java
package org.jabref.logic.remote; public class RemoteUtil { private RemoteUtil() { } public static boolean isUserPort(int portNumber) { return (portNumber >= 1024) && (portNumber <= 65535); } }
220
17.416667
61
java
null
jabref-main/src/main/java/org/jabref/logic/remote/client/RemoteClient.java
package org.jabref.logic.remote.client; import java.io.IOException; import java.net.InetSocketAddress; import java.net.Socket; import javafx.util.Pair; import org.jabref.logic.l10n.Localization; import org.jabref.logic.remote.Protocol; import org.jabref.logic.remote.RemoteMessage; import org.jabref.logic.remote.Remo...
2,501
34.239437
172
java
null
jabref-main/src/main/java/org/jabref/logic/remote/server/RemoteListenerServer.java
package org.jabref.logic.remote.server; import java.io.IOException; import java.net.ServerSocket; import java.net.Socket; import java.net.SocketException; import javafx.util.Pair; import org.jabref.logic.remote.Protocol; import org.jabref.logic.remote.RemoteMessage; import org.jabref.logic.remote.RemotePreferences; ...
2,731
33.15
129
java