Dockerfile.cloudrun

FROM python:3.11-slim

WORKDIR /app

RUN apt-get update && apt-get install -y --no-install-recommends \
    gcc g++ git \
    && rm -rf /var/lib/apt/lists/*

COPY requirements.txt .
RUN pip install --no-cache-dir -r requirements.txt

# Pre-bake ESM-2 35M weights — ProtFunc uses esm2_t12_35M_UR50D (480d)
RUN python -c "\
import esm; \
model, alphabet = esm.pretrained.esm2_t12_35M_UR50D(); \
print('ESM-2 35M baked into image')"

# Static / config files
COPY static/ static/
COPY go-basic.obo .
COPY go_map.json .
COPY go_names.json .
COPY mlb_public_v1.pkl .
COPY taxon_probe.json .
COPY temperature_best.json .
COPY platt_mammal.json .
COPY unified_v1_recalibrated.json .

# Model weights
COPY unified_35M_v1.pth .
COPY unified_35M_v1_thresholds.json .
COPY baseline_res.pth .

# Server
COPY server.py .

EXPOSE 8080
CMD ["sh", "-c", "uvicorn server:app --host 0.0.0.0 --port ${PORT:-8080}"]
# UI v2 PRISM-style landing 20260509

# UI v4 credit + stage-canvases 20260509c