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carbon-a-database-explorer

39.2 MB

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2 contributors

History: 23 commits

lvwerra's picture

lvwerra HF Staff

Turn the Sankey down the page and add lineage shortcuts

9021c34 verified 18 days ago

data
Turn the Sankey down the page and add lineage shortcuts 18 days ago
tests
Turn the Sankey down the page and add lineage shortcuts 18 days ago
.gitattributes

1.58 kB
Add GenBank assembly taxonomy tab and refreshable SQLite snapshot 25 days ago
.gitignore

39 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 25 days ago
FEATURE_BACKLOG.md

12.8 kB
Add clade silhouettes, compact navigation tabs, and drop the hover underline (#3) 18 days ago
README.md

18.9 kB
Turn the Sankey down the page and add lineage shortcuts 18 days ago
app.css

5.85 kB
Add clade silhouettes, compact navigation tabs, and drop the hover underline (#3) 18 days ago
app.py

15 kB
Remove Wet Lab placeholder and use two equal-width navigation tabs 18 days ago
atlas.css

5.44 kB
Turn the Sankey down the page and add lineage shortcuts 18 days ago
atlas.js

2.33 kB
Turn the Sankey down the page and add lineage shortcuts 18 days ago
benchmark_remote.py

2.48 kB
Add SQLite accession index and bounded on-demand bucket retrieval 25 days ago
build_full_index.py

10.8 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 20 days ago
build_index.py

6.02 kB
Add SQLite accession index and bounded on-demand bucket retrieval 25 days ago
build_snapshot.py

3.07 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 20 days ago
catalog.py

6.91 kB
Combine strand decisions into one binary CDS track with background ties 25 days ago
catalog_snapshot.py

1.95 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 20 days ago
compact_index.py

4.59 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 20 days ago
coverage_from_index.py

2.04 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 20 days ago
list_annotation_objects.py

1.36 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 20 days ago
merge_full_index.py

4.77 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 20 days ago
prepare_sample.py

3.89 kB
Deploy initial accession explorer with a bounded GenBank annotation sample 25 days ago
refresh_common_names.py

13.6 kB
Turn the Sankey down the page and add lineage shortcuts 18 days ago
refresh_coverage.py

9.32 kB
Color GenBank taxonomy by published annotation coverage 25 days ago
refresh_icons.py

10.7 kB
Add clade silhouettes, compact navigation tabs, and drop the hover underline (#3) 18 days ago
refresh_taxonomy.py

7.96 kB
Color GenBank taxonomy by published annotation coverage 25 days ago
remote_catalog.py

9.65 kB
Publish full accession snapshot from bucket storage and synchronize atlas coverage 20 days ago
requirements-data.txt

44 Bytes
Deploy initial accession explorer with a bounded GenBank annotation sample 25 days ago
requirements.txt

121 Bytes
Add adjustable binary CDS viewer and schema-validation backlog item 25 days ago
style.py

3.93 kB
Carry the genome atlas style through the annotation workspace 25 days ago
taxonomy.py

28.3 kB
Turn the Sankey down the page and add lineage shortcuts 18 days ago