| | --- |
| | license: mit |
| | tags: |
| | - generated_from_trainer |
| | metrics: |
| | - accuracy |
| | - f1 |
| | model-index: |
| | - name: biobert_model |
| | results: [] |
| | --- |
| | |
| | <!-- This model card has been generated automatically according to the information the Trainer had access to. You |
| | should probably proofread and complete it, then remove this comment. --> |
| |
|
| | # biobert_model |
| | |
| | This model is a fine-tuned version of [emilyalsentzer/Bio_ClinicalBERT](https://huggingface.co/emilyalsentzer/Bio_ClinicalBERT) on the None dataset. |
| | It achieves the following results on the evaluation set: |
| | - Loss: 0.9645 |
| | - Accuracy: 0.8711 |
| | - F1: 0.8475 |
| | |
| | ## Model description |
| | |
| | More information needed |
| | |
| | ## Intended uses & limitations |
| | |
| | More information needed |
| | |
| | ## Training and evaluation data |
| | |
| | More information needed |
| | |
| | ## Training procedure |
| | |
| | ### Training hyperparameters |
| | |
| | The following hyperparameters were used during training: |
| | - learning_rate: 1e-05 |
| | - train_batch_size: 8 |
| | - eval_batch_size: 8 |
| | - seed: 42 |
| | - optimizer: Adam with betas=(0.9,0.999) and epsilon=1e-08 |
| | - lr_scheduler_type: linear |
| | - num_epochs: 15 |
| | |
| | ### Training results |
| | |
| | | Training Loss | Epoch | Step | Validation Loss | Accuracy | F1 | |
| | |:-------------:|:-----:|:----:|:---------------:|:--------:|:------:| |
| | | No log | 1.0 | 334 | 0.6463 | 0.6897 | 0.7129 | |
| | | 0.4503 | 2.0 | 668 | 0.3590 | 0.8651 | 0.8269 | |
| | | 0.2715 | 3.0 | 1002 | 0.4549 | 0.8711 | 0.8252 | |
| | | 0.2715 | 4.0 | 1336 | 0.6012 | 0.8681 | 0.8434 | |
| | | 0.1335 | 5.0 | 1670 | 0.6307 | 0.8576 | 0.8313 | |
| | | 0.0746 | 6.0 | 2004 | 0.7658 | 0.8636 | 0.8366 | |
| | | 0.0746 | 7.0 | 2338 | 0.8658 | 0.8666 | 0.8436 | |
| | | 0.0307 | 8.0 | 2672 | 0.8312 | 0.8711 | 0.8453 | |
| | | 0.0148 | 9.0 | 3006 | 0.8922 | 0.8651 | 0.8421 | |
| | | 0.0148 | 10.0 | 3340 | 0.8761 | 0.8726 | 0.8490 | |
| | | 0.0128 | 11.0 | 3674 | 0.9329 | 0.8681 | 0.8462 | |
| | | 0.0105 | 12.0 | 4008 | 0.9512 | 0.8666 | 0.8441 | |
| | | 0.0105 | 13.0 | 4342 | 0.9553 | 0.8711 | 0.8475 | |
| | | 0.0069 | 14.0 | 4676 | 0.9731 | 0.8681 | 0.8445 | |
| | | 0.0046 | 15.0 | 5010 | 0.9645 | 0.8711 | 0.8475 | |
| | |
| | |
| | ### Framework versions |
| | |
| | - Transformers 4.29.2 |
| | - Pytorch 2.0.1+cu118 |
| | - Datasets 2.12.0 |
| | - Tokenizers 0.13.3 |
| | |
