ID
stringlengths
13
17
question
stringlengths
88
1.13k
answer
stringlengths
6
156
reference_sequence
stringlengths
4.1k
4.1k
variant_sequence
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4.1k
4.1k
Task1_train_13100
This sequence change occurs on Chromosome 9, altering MUSK (muscle associated receptor tyrosine kinase). What is the medical significance of this variant — is it benign or linked to a disease?
Pathogenic; not provided
TTAAAGACATGGCTTGGGCTAGGCATGAGGTTTTCTTATGCCCATCCATCTATGCATCCATCCTTAAATCTATCCATGCATCCACCTATGCATTAATTCATCCATCCACCCATCAACATATATTGAAAACCCATAGTGAGCCATGTGTAGTATTAGACCTGAGGTTACAAGGATGAATAAAATACAGTCTTCCTCTCAATAATTATTATATTTTGAAGTCCCACCTAAGAGTTGGGTTGGAGTAATTACAATATAGAAAACATTTTGAGGTCTTAAATAAATGTATATACATATATAATTGTAAATTATATCTATACACA...
TTAAAGACATGGCTTGGGCTAGGCATGAGGTTTTCTTATGCCCATCCATCTATGCATCCATCCTTAAATCTATCCATGCATCCACCTATGCATTAATTCATCCATCCACCCATCAACATATATTGAAAACCCATAGTGAGCCATGTGTAGTATTAGACCTGAGGTTACAAGGATGAATAAAATACAGTCTTCCTCTCAATAATTATTATATTTTGAAGTCCCACCTAAGAGTTGGGTTGGAGTAATTACAATATAGAAAACATTTTGAGGTCTTAAATAAATGTATATACATATATAATTGTAAATTATATCTATACACA...
Task1_train_13101
With a mutation on Chromosome 9 in gene SHOC1 (shortage in chiasmata 1), classify this variant as benign or pathogenic. Include the disease if it's pathogenic.
Pathogenic; Spermatogenic failure 75
TTTGTATTTACTACTCTATCTCCCACTGTTGAAAGTTTGAGAATATATCTGTCCATATATTTTTCATGCCAAAGTTGGAGTCAACCTAAATGTTCATTAGTGAGAGAATGATTAAATATATTATGGCAGATTATATTATGCAGCTGCTAAGAAGAATATGTATTCAGTAGTGCTGCTATAATATGACACAGGCATTCCTAAAAATCACCAAGTTATATCAAATCACACAATAACCACCACAGGGCCTATGGGAAAATGGAGTTGGGACTTAATATTAAAAAATTTTGCCAGTGACAGTAAAAAAGACAGAAACCTAATGA...
TTTGTATTTACTACTCTATCTCCCACTGTTGAAAGTTTGAGAATATATCTGTCCATATATTTTTCATGCCAAAGTTGGAGTCAACCTAAATGTTCATTAGTGAGAGAATGATTAAATATATTATGGCAGATTATATTATGCAGCTGCTAAGAAGAATATGTATTCAGTAGTGCTGCTATAATATGACACAGGCATTCCTAAAAATCACCAAGTTATATCAAATCACACAATAACCACCACAGGGCCTATGGGAAAATGGAGTTGGGACTTAATATTAAAAAATTTTGCCAGTGACAGTAAAAAAGACAGAAACCTAATGA...
Task1_train_13102
Here is a genetic alteration in SHOC1 (shortage in chiasmata 1) on Chromosome 9. Based on the data, is it a benign variant or a cause of disease?
Pathogenic; Spermatogenic failure 75
TAAATAGTAATGCCAAAGTATGATTTAGTAACTGCATGTCTTAGAGGAACAGAAAGAATTCAGTCCAAGTATAAAGCTCTCAGTGGTCTCACTTAACTAGGGTAAATTATAGACTACACTACTTAAAGATAAATATTGTTTAAGCCAACCTCCATAAATATTATTTCTTTCTTTTCTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTTTTTGCCCAGGCTGGAGTGCAATGGCGCAATCTTGGCTCACTGCAGCCTGTGCCTCGCGGGTTCAAGTGATCCTTCTGCCTCAGCCTCCTGAGTAG...
TAAATAGTAATGCCAAAGTATGATTTAGTAACTGCATGTCTTAGAGGAACAGAAAGAATTCAGTCCAAGTATAAAGCTCTCAGTGGTCTCACTTAACTAGGGTAAATTATAGACTACACTACTTAAAGATAAATATTGTTTAAGCCAACCTCCATAAATATTATTTCTTTCTTTTCTCCCTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTTTTTGCCCAGGCTGGAGTGCAATGGCGCAATCTTGGCTCACTGCAGCCTGTGCCTCGCGGGTTCAAGTGATCCTTCTGCCTCAGCCTCCTGAGTAG...
Task1_train_13103
A change on Chromosome 9 affects gene SLC31A1 (solute carrier family 31 member 1). Identify whether the variant is neutral or disease-linked. Mention the disease if applicable.
Pathogenic; Neurodegeneration and seizures due to copper transport defect
GGCATTCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGTAGTGAGCCGAGATCTCGCCACTGCATTCCAGCCTGGGCTACAGAGCGAGAATCCGTATCAAAAAAAAAAAAAAAAAAGATAAAAGTTGATGGTGGGGGCCCAGGAGAAAAGTTGATGGTGGGGGCCTAGTAGAATACTCATGCTCGGTGCCTGTGGTGGTAACGCTAACATGAGGGCAAAAGCCTCCCACTCACGTGAATGTCTCTTATTATCCAGATCTTCTACTTTTAAATGTTCTAAGCTTC...
GGCATTCGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCAGGAGGTGGAGGTTGTAGTGAGCCGAGATCTCGCCACTGCATTCCAGCCTGGGCTACAGAGCGAGAATCCGTATCAAAAAAAAAAAAAAAAAAGATAAAAGTTGATGGTGGGGGCCCAGGAGAAAAGTTGATGGTGGGGGCCTAGTAGAATACTCATGCTCGGTGCCTGTGGTGGTAACGCTAACATGAGGGCAAAAGCCTCCCACTCACGTGAATGTCTCTTATTATCCAGATCTTCTACTTTTAAATGTTCTAAGCTTC...
Task1_train_13104
Given a variant located on Chromosome 9 and affecting ALAD (aminolevulinate dehydratase), assess whether it is benign or pathogenic. Indicate the associated disease if pathogenic.
Pathogenic; Porphobilinogen synthase deficiency
TTTACAAACTACAAATTTGATTGAGTCACTCTGAAAAGGTGAATGTGGCCCTTGACCTCTGCATGGTTTGGTCCTGGTCTGTCTCTCTCCACTCAGTTCAGGCCATCCTCTCAGTGCTCCAGACAAGCTAGCCTTGCATTCCTCCAGCTAGAAGGAGCCCCAGGGCCTTTGCACAACTCCTCCCTCTCCCTGGAATGCTCTTCCCCAATTGTCTTAGCTTGATGGCTCACCCTTCAGGTCTAGGCTCAAATGTCAGTCCTTCAGGGAAGTATTTTCTGATCCTTCAAAGAGGTCAGGTCCTGGTGACCTCCTTCAGAGCA...
TTTACAAACTACAAATTTGATTGAGTCACTCTGAAAAGGTGAATGTGGCCCTTGACCTCTGCATGGTTTGGTCCTGGTCTGTCTCTCTCCACTCAGTTCAGGCCATCCTCTCAGTGCTCCAGACAAGCTAGCCTTGCATTCCTCCAGCTAGAAGGAGCCCCAGGGCCTTTGCACAACTCCTCCCTCTCCCTGGAATGCTCTTCCCCAATTGTCTTAGCTTGATGGCTCACCCTTCAGGTCTAGGCTCAAATGTCAGTCCTTCAGGGAAGTATTTTCTGATCCTTCAAAGAGGTCAGGTCCTGGTGACCTCCTTCAGAGCA...
Task1_train_13105
Chromosome 9 houses a mutation in gene KIF12 (kinesin family member 12). Classify its clinical impact — is it pathogenic or benign, and what disease does it lead to if any?
Pathogenic; Cholestasis, progressive familial intrahepatic, 8
TGGCCCTGACAGGGCAGGGTGAGGAGGGGGGAGGGTGAGGCAAACAGCTATTTCAAACCAGGGCAGAGGGAGCCCTAGGCCAGCCATTCACTCCCCATGATCTAGCCTGCAGCCCTGGAATCCCTGGGGCTCTGGATTGATGACTCCTGGATCAAGGTCTCCAGTTCTCCCAGCCTTCCCTCACTCCCACCATGGCCTTTCCTACCTGGGGCAGGTGGTGCTCCCCTGGCAGGCAGGCCCAGTGGGCCAGGGGCACTCGACACAGTGGGCAGATGTGGCAGCAGGGGCAGGAGTAGAGGGGTGGCAGTGCCTGCAAAAAG...
TGGCCCTGACAGGGCAGGGTGAGGAGGGGGGAGGGTGAGGCAAACAGCTATTTCAAACCAGGGCAGAGGGAGCCCTAGGCCAGCCATTCACTCCCCATGATCTAGCCTGCAGCCCTGGAATCCCTGGGGCTCTGGATTGATGACTCCTGGATCAAGGTCTCCAGTTCTCCCAGCCTTCCCTCACTCCCACCATGGCCTTTCCTACCTGGGGCAGGTGGTGCTCCCCTGGCAGGCAGGCCCAGTGGGCCAGGGGCACTCGACACAGTGGGCAGATGTGGCAGCAGGGGCAGGAGTAGAGGGGTGGCAGTGCCTGCAAAAAG...
Task1_train_13106
A variant has been detected on Chromosome 9 in COL27A1 (collagen type XXVII alpha 1 chain). What is its effect — pathogenic or benign? If pathogenic, name the disease.
Pathogenic; Steel syndrome
GACACATTCCAGCTGTGAACTGAAGAATGTTTGTGGTTTGGCTAACGATGATTGGAGAAGGGGTTTCTAGGTGTGGGTGACTGCCTGAGCAACAGCCTGGTCGCAGGACAGTGTGGGACATGGCTGGGGCGTGGGCTGTGGTTTGAGGATAGAGCAGAGGGACCCTCTCTGTGGGTTTGGCTGCTGAAAGGAGAGCAGAGTCTAGATAGGGTGCCTGGGACTGGCTGGATTACAGAAGACTTGGGATAGCAGAAGGAGGAACTTGGACTTTGTCACCATGCAGTCAGGGGAAGCTGTGGAAGGTGTTAGAGCAGGGGAGT...
GACACATTCCAGCTGTGAACTGAAGAATGTTTGTGGTTTGGCTAACGATGATTGGAGAAGGGGTTTCTAGGTGTGGGTGACTGCCTGAGCAACAGCCTGGTCGCAGGACAGTGTGGGACATGGCTGGGGCGTGGGCTGTGGTTTGAGGATAGAGCAGAGGGACCCTCTCTGTGGGTTTGGCTGCTGAAAGGAGAGCAGAGTCTAGATAGGGTGCCTGGGACTGGCTGGATTACAGAAGACTTGGGATAGCAGAAGGAGGAACTTGGACTTTGTCACCATGCAGTCAGGGGAAGCTGTGGAAGGTGTTAGAGCAGGGGAGT...
Task1_train_13107
The gene COL27A1 (collagen type XXVII alpha 1 chain) on Chromosome 9 contains a mutation. Based on this information, is the variant pathogenic or benign? Provide the disease if relevant.
Pathogenic; Steel syndrome
CCCAAAGTTCAGAGGCCAGAGGTGGGAACTCAATGCCTTCAGAAGGTGCCCTGGCTGGACGCCATGGCTCACACCTGTAATCCCAACACTTTGGGAGGCCAAGGCAGGCAGATCGCTTGAGCCCAGGAGTTCGAGACCAGCTTGGGCAACATGGAGAAACCCCATCTTTACCAAAAATACAAAAATTAGCCAGGTGTAGTGGTGTGCATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGCAGGATCACTAGGAGGCAGAGGTTGCAGTGAGCAGTTATCACACCACTGCACTTCAGCCTGGATGACAGAGTGAGACC...
CCCAAAGTTCAGAGGCCAGAGGTGGGAACTCAATGCCTTCAGAAGGTGCCCTGGCTGGACGCCATGGCTCACACCTGTAATCCCAACACTTTGGGAGGCCAAGGCAGGCAGATCGCTTGAGCCCAGGAGTTCGAGACCAGCTTGGGCAACATGGAGAAACCCCATCTTTACCAAAAATACAAAAATTAGCCAGGTGTAGTGGTGTGCATCTGTAATCCCAGCTACTTGGGAGGCTGAGGCGGCAGGATCACTAGGAGGCAGAGGTTGCAGTGAGCAGTTATCACACCACTGCACTTCAGCCTGGATGACAGAGTGAGACC...
Task1_train_13108
Located on Chromosome 9, this mutation impacts TNC (tenascin C). What is its biological consequence — is it benign or pathogenic, and which disease is associated if any?
Pathogenic; Autosomal dominant nonsyndromic hearing loss 56
CTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATGATCCTGCCTCAGCCTCCCAAGTAGCTGGGATTGCAGGTGTGCACCACCAAGCCCAGCTAACTTTTGTATTTTCAGTAGAGATGGGTTTTTTCACCATGTTGGCTAGGCTGGTCTTGAACACCTGACCTCAGGTGATCCACCTTCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCGCACCTGGCCCCGAGCCTTTTCTGAGCTTTGAGTGGTATTTCTCCTTAGATGGCTTGCAGAGAACATAAAGCCAGGCTCTGGAGGCCGGTGGTCCCGGG...
CTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATGATCCTGCCTCAGCCTCCCAAGTAGCTGGGATTGCAGGTGTGCACCACCAAGCCCAGCTAACTTTTGTATTTTCAGTAGAGATGGGTTTTTTCACCATGTTGGCTAGGCTGGTCTTGAACACCTGACCTCAGGTGATCCACCTTCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGTCACCGCACCTGGCCCCGAGCCTTTTCTGAGCTTTGAGTGGTATTTCTCCTTAGATGGCTTGCAGAGAACATAAAGCCAGGCTCTGGAGGCCGGTGGTCCCGGG...
Task1_train_13109
A variant found in Chromosome 9 affects ASTN2, TRIM32 (astrotactin 2| tripartite motif containing 32). Please analyze its biological impact: is it benign or pathogenic, and what condition might it cause?
Pathogenic; Bardet-Biedl syndrome
CCCCACTCCATTCCTGCTTTGATCATATCATCTTCCTGCTTCAAAACATTCATCACCTCACCATGCCCTTGAAAATGACGCTCAAAAATCTCATTTTGGCTCTGAAGACCTTTTATAATTATTCCCCCAATTTACCTTTCCAAGTCTGTTACTCTATTCCCCATATATACTCCCACAGTTTTAATCTAAGGATAATAAAAAAGAGAACTAAAATTCATTAAAGGCTTTTTTGGTGCAGAGCCAAATCTTAGCATTCTATACACTCTATATATTATTTCATTCTTACATTAACTCTGTAAAGACAGTATTTTTCCATTTTA...
CCCCACTCCATTCCTGCTTTGATCATATCATCTTCCTGCTTCAAAACATTCATCACCTCACCATGCCCTTGAAAATGACGCTCAAAAATCTCATTTTGGCTCTGAAGACCTTTTATAATTATTCCCCCAATTTACCTTTCCAAGTCTGTTACTCTATTCCCCATATATACTCCCACAGTTTTAATCTAAGGATAATAAAAAAGAGAACTAAAATTCATTAAAGGCTTTTTTGGTGCAGAGCCAAATCTTAGCATTCTATACACTCTATATATTATTTCATTCTTACATTAACTCTGTAAAGACAGTATTTTTCCATTTTA...
Task1_train_13110
Consider a variant on Chromosome 9 in gene ASTN2, TRIM32 (astrotactin 2| tripartite motif containing 32). Determine its clinical classification and disease relevance.
Pathogenic; Bardet-Biedl syndrome
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
Task1_train_13111
This variant lies on Chromosome 9 and affects the gene ASTN2, TRIM32 (astrotactin 2| tripartite motif containing 32). Based on this context, is the mutation pathogenic or benign? If pathogenic, what disease does it cause?
Pathogenic; Myopathy
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
Task1_train_13112
Gene ASTN2, TRIM32 (astrotactin 2| tripartite motif containing 32), found on Chromosome 9, is impacted by this variant. What is the biological outcome — benign or pathogenic?
Pathogenic; Retinal dystrophy
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
Task1_train_13113
Given this variant in gene ASTN2, TRIM32 (astrotactin 2| tripartite motif containing 32) on Chromosome 9, classify it as benign or pathogenic. Include the disorder it may cause if applicable.
Pathogenic; Sarcotubular myopathy
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
Task1_train_13114
Here is a variant affecting ASTN2, TRIM32 (astrotactin 2| tripartite motif containing 32) on Chromosome 9. Please identify whether it is a benign mutation or associated with a disorder.
Pathogenic; Bardet-Biedl syndrome 11
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
ACTTATTCCTTTTACTGTGCATAATTCTCCTGTGCTTTTCTCTTAGTGTAAATCAGAAGTTGTAAAATTCACCAAATATGAAAATAATCATTAGCTCATTAGCATTTATTACAAGTATACTACTTCCCTGGTGCTATACTAAGCACATCATATTTATCTTGTTACTTAGCCCTTATAATAACCATATAAGGCAGACACCATTATTACTTCTATTTTACAGATGAGTGATGGGGAAAGAGCTTTTGGAAGTTTGAGTTAATTCCTTATGGTCATGCAGCTAAGTAAGTGTCTGAGACTACAGAATCTGAATTATTTCCCAC...
Task1_train_13115
This gene mutation involves CDK5RAP2 (CDK5 regulatory subunit associated protein 2) on Chromosome 9. Is it associated with any clinical condition, or is it benign?
Pathogenic; Microcephaly
GATACTGTCTCAAAAACAAAAAGAATAAAGAAATTCATTCTTAAACTACTATTAAAGAAAGATATCATTAAGTAAGGCGAGGCGCAGTGCCTCACGCCTATAATCCAAGCACTTTGGGAGGCCAAGGCAGGTGGATCACTTGAGGCCAGGAGTTTGAGACCAGCCTGGAGAACATGGGGAAACCCCATCTCTACCAAAAGTACAAAAATTAGCCAGGCGTGCTGGCGTGCACATGTAATCCCAGCTAATCAGGAGGCTGAGGACAGGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTAAGCCAAGATTGTGCCACTG...
GATACTGTCTCAAAAACAAAAAGAATAAAGAAATTCATTCTTAAACTACTATTAAAGAAAGATATCATTAAGTAAGGCGAGGCGCAGTGCCTCACGCCTATAATCCAAGCACTTTGGGAGGCCAAGGCAGGTGGATCACTTGAGGCCAGGAGTTTGAGACCAGCCTGGAGAACATGGGGAAACCCCATCTCTACCAAAAGTACAAAAATTAGCCAGGCGTGCTGGCGTGCACATGTAATCCCAGCTAATCAGGAGGCTGAGGACAGGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTAAGCCAAGATTGTGCCACTG...
Task1_train_13116
This variant lies on Chromosome 9 and affects the gene C5 (complement C5). Based on this context, is the mutation pathogenic or benign? If pathogenic, what disease does it cause?
Pathogenic; Complement component 5 deficiency
TCTCTGGGACTAATTTGTCTTGGATGCAAAATTATGGAACTGTTCACTGGACTCATGTGTAAAATCTGCCGCATCTGTTCTGCACACTAGCCAAAACACATGGTCAAGAGTACACATTGTCCTAGAAAATACAACAGGAGAATTCAGCTCACATTAAACTCCAGCACCGTCACTCCAGATGGGAGATTAAGCACAAAGGAAGCTACTCCATCATCAACACGTGTTACACTTTTGCTTGGATCCAAGTCAGATGTCTCTTGGTTTACATCAATTGTTTGTGCATTCAGTGTTACTGGGACTCCTCCTACCAACTGGTCAAG...
TCTCTGGGACTAATTTGTCTTGGATGCAAAATTATGGAACTGTTCACTGGACTCATGTGTAAAATCTGCCGCATCTGTTCTGCACACTAGCCAAAACACATGGTCAAGAGTACACATTGTCCTAGAAAATACAACAGGAGAATTCAGCTCACATTAAACTCCAGCACCGTCACTCCAGATGGGAGATTAAGCACAAAGGAAGCTACTCCATCATCAACACGTGTTACACTTTTGCTTGGATCCAAGTCAGATGTCTCTTGGTTTACATCAATTGTTTGTGCATTCAGTGTTACTGGGACTCCTCCTACCAACTGGTCAAG...
Task1_train_13117
This mutation occurs in GSN (gelsolin) on Chromosome 9. Does this change lead to a known medical condition, or is it benign?
Pathogenic; Finnish type amyloidosis
CTGTGGGCCCCATTTTGCACATCAGTGCGATGCAGCAATGACACCTCCCTTGCAGGCGATGCGTGAAGAATGCCCGGCACAGTGGGCATCATCATTTCACAAACACGTATACTGCTGACACAGGAAGACAGAGCAGGAGCCCAATATACACGGACTCCGTTTGTCCCTTGCCCTCCTCGAGTCTGTGCGGCTAGAATTAGACTTAGCACAGTGGGCTGAGGGGCCCTGGATGGGGTGGCTGCATTGCTGGCCTGAGTGGAAGCCCTCTGCTTCCACCCCCATGTGTCTCCGGAGCAGGGAGACGAGCACCCGATTGGGAG...
CTGTGGGCCCCATTTTGCACATCAGTGCGATGCAGCAATGACACCTCCCTTGCAGGCGATGCGTGAAGAATGCCCGGCACAGTGGGCATCATCATTTCACAAACACGTATACTGCTGACACAGGAAGACAGAGCAGGAGCCCAATATACACGGACTCCGTTTGTCCCTTGCCCTCCTCGAGTCTGTGCGGCTAGAATTAGACTTAGCACAGTGGGCTGAGGGGCCCTGGATGGGGTGGCTGCATTGCTGGCCTGAGTGGAAGCCCTCTGCTTCCACCCCCATGTGTCTCCGGAGCAGGGAGACGAGCACCCGATTGGGAG...
Task1_train_13118
This variant affects the gene GSN (gelsolin) found on Chromosome 9. What is the clinical effect of this variant — benign or pathogenic? State the disease if applicable.
Pathogenic; Finnish type amyloidosis
CCCCATTTTGCACATCAGTGCGATGCAGCAATGACACCTCCCTTGCAGGCGATGCGTGAAGAATGCCCGGCACAGTGGGCATCATCATTTCACAAACACGTATACTGCTGACACAGGAAGACAGAGCAGGAGCCCAATATACACGGACTCCGTTTGTCCCTTGCCCTCCTCGAGTCTGTGCGGCTAGAATTAGACTTAGCACAGTGGGCTGAGGGGCCCTGGATGGGGTGGCTGCATTGCTGGCCTGAGTGGAAGCCCTCTGCTTCCACCCCCATGTGTCTCCGGAGCAGGGAGACGAGCACCCGATTGGGAGGAGGAAA...
CCCCATTTTGCACATCAGTGCGATGCAGCAATGACACCTCCCTTGCAGGCGATGCGTGAAGAATGCCCGGCACAGTGGGCATCATCATTTCACAAACACGTATACTGCTGACACAGGAAGACAGAGCAGGAGCCCAATATACACGGACTCCGTTTGTCCCTTGCCCTCCTCGAGTCTGTGCGGCTAGAATTAGACTTAGCACAGTGGGCTGAGGGGCCCTGGATGGGGTGGCTGCATTGCTGGCCTGAGTGGAAGCCCTCTGCTTCCACCCCCATGTGTCTCCGGAGCAGGGAGACGAGCACCCGATTGGGAGGAGGAAA...
Task1_train_13119
This variant affects gene GSN (gelsolin) located on Chromosome 9. Evaluate its biological effect and specify any disease association.
Pathogenic; Inborn genetic diseases
CCCCATTTTGCACATCAGTGCGATGCAGCAATGACACCTCCCTTGCAGGCGATGCGTGAAGAATGCCCGGCACAGTGGGCATCATCATTTCACAAACACGTATACTGCTGACACAGGAAGACAGAGCAGGAGCCCAATATACACGGACTCCGTTTGTCCCTTGCCCTCCTCGAGTCTGTGCGGCTAGAATTAGACTTAGCACAGTGGGCTGAGGGGCCCTGGATGGGGTGGCTGCATTGCTGGCCTGAGTGGAAGCCCTCTGCTTCCACCCCCATGTGTCTCCGGAGCAGGGAGACGAGCACCCGATTGGGAGGAGGAAA...
CCCCATTTTGCACATCAGTGCGATGCAGCAATGACACCTCCCTTGCAGGCGATGCGTGAAGAATGCCCGGCACAGTGGGCATCATCATTTCACAAACACGTATACTGCTGACACAGGAAGACAGAGCAGGAGCCCAATATACACGGACTCCGTTTGTCCCTTGCCCTCCTCGAGTCTGTGCGGCTAGAATTAGACTTAGCACAGTGGGCTGAGGGGCCCTGGATGGGGTGGCTGCATTGCTGGCCTGAGTGGAAGCCCTCTGCTTCCACCCCCATGTGTCTCCGGAGCAGGGAGACGAGCACCCGATTGGGAGGAGGAAA...
Task1_train_13120
This sequence variant lies in GSN (gelsolin) on Chromosome 9. Is it clinically significant, and what condition might it cause if any?
Pathogenic; Finnish type amyloidosis
TTCCAGGAGGGACTCGCTATGTTCGGAAAGGAGGGAGCTATCCCAGGGGGCTAGTGCTGATGGCATCCCCAGGGAGGGGCCTTGAATGCCAATTTCAAGGGTGTAGACTTGATCCTCTAACCAGTGGGTGCTAGTGAGGGGTTTTTCTTTTTATTAAATCAGACATGCAACAGGCTCAGATTTATGCTTTATCTTTTTTTTTTTTTTTAATAGAGACAGGGTCTCGCTATGTTGCCCGGGCTAATTTCAAACTCCTGGGCTCAAGCAATCCTCCTGCCTCGGCCCCCCAAAGTGTTGGAATTACAGGCATGAGCCACTGC...
TTCCAGGAGGGACTCGCTATGTTCGGAAAGGAGGGAGCTATCCCAGGGGGCTAGTGCTGATGGCATCCCCAGGGAGGGGCCTTGAATGCCAATTTCAAGGGTGTAGACTTGATCCTCTAACCAGTGGGTGCTAGTGAGGGGTTTTTCTTTTTATTAAATCAGACATGCAACAGGCTCAGATTTATGCTTTATCTTTTTTTTTTTTTTTAATAGAGACAGGGTCTCGCTATGTTGCCCGGGCTAATTTCAAACTCCTGGGCTCAAGCAATCCTCCTGCCTCGGCCCCCCAAAGTGTTGGAATTACAGGCATGAGCCACTGC...
Task1_train_13121
This mutation is located in gene NDUFA8 (NADH:ubiquinone oxidoreductase subunit A8) on Chromosome 9. Is it associated with a disease or is it a benign polymorphism?
Pathogenic; Mitochondrial complex 1 deficiency, nuclear type 37
AAAAACAAAAAAAATGTTGCCCAGGCTAGTCCTGAACTCGTGAGCTCAAGCGATCCTCCTGCCTCAGCCTCCCAAAGTGCTAGAATTGCAGGTGTGAGCCATGGCACCTGATCGAGAAATACACTTTTGAAAAGAGTTAAGAGAATTTTTTTTTTATCTCACAGAGTTTTAAAAAATGTTAATACAAAGATTCAAGAATAAATATGCTTTCTTACTAGCATGACTTGTTATTTCTTCTTTCATAAGTCAGAAATGAGAAAAGGTAGTTTTATTTGTTACATGTATAAGTTCTACCACTTTCCAATCTAGAATTATCAACT...
AAAAACAAAAAAAATGTTGCCCAGGCTAGTCCTGAACTCGTGAGCTCAAGCGATCCTCCTGCCTCAGCCTCCCAAAGTGCTAGAATTGCAGGTGTGAGCCATGGCACCTGATCGAGAAATACACTTTTGAAAAGAGTTAAGAGAATTTTTTTTTTATCTCACAGAGTTTTAAAAAATGTTAATACAAAGATTCAAGAATAAATATGCTTTCTTACTAGCATGACTTGTTATTTCTTCTTTCATAAGTCAGAAATGAGAAAAGGTAGTTTTATTTGTTACATGTATAAGTTCTACCACTTTCCAATCTAGAATTATCAACT...
Task1_train_13122
A genetic alteration is present in NDUFA8 (NADH:ubiquinone oxidoreductase subunit A8) on Chromosome 9. Is this variant benign or disease-causing, and if the latter, which condition is involved?
Pathogenic; Mitochondrial complex 1 deficiency, nuclear type 37
GGTACTGGGTGCCCTATAGTCCTAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGCGAACCCGGGAGGCGGAGCTTGCAGTAAGCCAAGATCGTGCTACTGCACTCCAGCCTGGGCGACAGAGTGACACCCCATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAATACAGTTCAAGAGCCATAATGATGTTCAAAGCCCTTTATAGAGTAAACTCACTGTTAGGAAATTTATGCCAAGGAATTATTAACTGATGAAAATGATCTATACGCAAAGGTAATCACTGCAGATTTATCCAAAATAATCAAAAACTGAAAT...
GGTACTGGGTGCCCTATAGTCCTAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGCGAACCCGGGAGGCGGAGCTTGCAGTAAGCCAAGATCGTGCTACTGCACTCCAGCCTGGGCGACAGAGTGACACCCCATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAGCAATACAGTTCAAGAGCCATAATGATGTTCAAAGCCCTTTATAGAGTAAACTCACTGTTAGGAAATTTATGCCAAGGAATTATTAACTGATGAAAATGATCTATACGCAAAGGTAATCACTGCAGATTTATCCAAAATAATCAAAAACTGAAAT...
Task1_train_13123
A mutation in CRB2 (crumbs cell polarity complex component 2), located on Chromosome 9, is being studied. Determine whether it’s pathogenic or benign, and specify the linked disease.
Pathogenic; Focal segmental glomerulosclerosis 9
GGCAATGGAGCCGGGGGCTCTGTGGACCTTCCTGGGCCACCTGTGGCTCCTGGCAGGTATGGAGGAATGTGGGCCCTGGGCAGGGGGAGGTTGGTGGGTGGTGGTTCCTAGGAAGAGGCTGTGGTGTTTGTGAGCTGATCGAGGCTGGGCTTCAAACCCTGGTGACTTCTCTGGGCCTGGGTTCCTCCAGCTGGGATGTGGCTCTGGCTGAGCTACAGTGGGCTATGGCTTCTGGACCCAAGCTGGGGCCTGAGCACCTGAAGGGATCCCTAGAGGGAGGATGAGGCAGCCCCTTCACAGCCAGTGTGGGGGCCCTGGGG...
GGCAATGGAGCCGGGGGCTCTGTGGACCTTCCTGGGCCACCTGTGGCTCCTGGCAGGTATGGAGGAATGTGGGCCCTGGGCAGGGGGAGGTTGGTGGGTGGTGGTTCCTAGGAAGAGGCTGTGGTGTTTGTGAGCTGATCGAGGCTGGGCTTCAAACCCTGGTGACTTCTCTGGGCCTGGGTTCCTCCAGCTGGGATGTGGCTCTGGCTGAGCTACAGTGGGCTATGGCTTCTGGACCCAAGCTGGGGCCTGAGCACCTGAAGGGATCCCTAGAGGGAGGATGAGGCAGCCCCTTCACAGCCAGTGTGGGGGCCCTGGGG...
Task1_train_13124
A variant has been detected on Chromosome 9 in CRB2 (crumbs cell polarity complex component 2). What is its effect — pathogenic or benign? If pathogenic, name the disease.
Pathogenic; Ventriculomegaly-cystic kidney disease
CGGGGGCTCTGTGGACCTTCCTGGGCCACCTGTGGCTCCTGGCAGGTATGGAGGAATGTGGGCCCTGGGCAGGGGGAGGTTGGTGGGTGGTGGTTCCTAGGAAGAGGCTGTGGTGTTTGTGAGCTGATCGAGGCTGGGCTTCAAACCCTGGTGACTTCTCTGGGCCTGGGTTCCTCCAGCTGGGATGTGGCTCTGGCTGAGCTACAGTGGGCTATGGCTTCTGGACCCAAGCTGGGGCCTGAGCACCTGAAGGGATCCCTAGAGGGAGGATGAGGCAGCCCCTTCACAGCCAGTGTGGGGGCCCTGGGGCAGAGGGACTG...
CGGGGGCTCTGTGGACCTTCCTGGGCCACCTGTGGCTCCTGGCAGGTATGGAGGAATGTGGGCCCTGGGCAGGGGGAGGTTGGTGGGTGGTGGTTCCTAGGAAGAGGCTGTGGTGTTTGTGAGCTGATCGAGGCTGGGCTTCAAACCCTGGTGACTTCTCTGGGCCTGGGTTCCTCCAGCTGGGATGTGGCTCTGGCTGAGCTACAGTGGGCTATGGCTTCTGGACCCAAGCTGGGGCCTGAGCACCTGAAGGGATCCCTAGAGGGAGGATGAGGCAGCCCCTTCACAGCCAGTGTGGGGGCCCTGGGGCAGAGGGACTG...
Task1_train_13125
The gene NR5A1 (nuclear receptor subfamily 5 group A member 1) is located on Chromosome 9, where a mutation has occurred. What is the medical relevance of this mutation?
Pathogenic; 46,XY sex reversal 3
GCTCTGAGGGGTCTGGTCTCCCAGGTCTGTGGCTCATGGGCCCTTGGCAAGTGCCTTCCCCTCCTAGAGTATAACCCCTGCCTCACAGGGCTGCTGCGGGGACAGTGAGATGAGGGTGGCACACAGTAGGTGCCCCTTAAATGGCTGCTCCTTCTGCCCCAAGATGGGGGCTGAGCTGGCATGGCCAGCATGCAACAGGCAGAGAGGCTACAGCATCCCCCTGGCCTCCCAGTGCCTCAGGGTCCCAGGGATGAGGTGGGTCCCAAACCCCAACAGTGCCTGGTGTCCCCCCACCCGGCCCCGCCACCCACCTGCCTCCT...
GCTCTGAGGGGTCTGGTCTCCCAGGTCTGTGGCTCATGGGCCCTTGGCAAGTGCCTTCCCCTCCTAGAGTATAACCCCTGCCTCACAGGGCTGCTGCGGGGACAGTGAGATGAGGGTGGCACACAGTAGGTGCCCCTTAAATGGCTGCTCCTTCTGCCCCAAGATGGGGGCTGAGCTGGCATGGCCAGCATGCAACAGGCAGAGAGGCTACAGCATCCCCCTGGCCTCCCAGTGCCTCAGGGTCCCAGGGATGAGGTGGGTCCCAAACCCCAACAGTGCCTGGTGTCCCCCCACCCGGCCCCGCCACCCACCTGCCTCCT...
Task1_train_13126
Mutation context: Chromosome 9, Gene NR5A1 (nuclear receptor subfamily 5 group A member 1). Determine if this variant is likely to be benign or pathogenic. Mention the disease if applicable.
Pathogenic; Disorder of sexual differentiation
GGGCTGCTGCGGGGACAGTGAGATGAGGGTGGCACACAGTAGGTGCCCCTTAAATGGCTGCTCCTTCTGCCCCAAGATGGGGGCTGAGCTGGCATGGCCAGCATGCAACAGGCAGAGAGGCTACAGCATCCCCCTGGCCTCCCAGTGCCTCAGGGTCCCAGGGATGAGGTGGGTCCCAAACCCCAACAGTGCCTGGTGTCCCCCCACCCGGCCCCGCCACCCACCTGCCTCCTCAGAGTTTTGAAGCAAAGAGGGTCTGCGTGCCACCTCCATCCAAGTCAGAGCGCTGCCCCAACCTAGACCACCCGGAATCCACCCGG...
GGGCTGCTGCGGGGACAGTGAGATGAGGGTGGCACACAGTAGGTGCCCCTTAAATGGCTGCTCCTTCTGCCCCAAGATGGGGGCTGAGCTGGCATGGCCAGCATGCAACAGGCAGAGAGGCTACAGCATCCCCCTGGCCTCCCAGTGCCTCAGGGTCCCAGGGATGAGGTGGGTCCCAAACCCCAACAGTGCCTGGTGTCCCCCCACCCGGCCCCGCCACCCACCTGCCTCCTCAGAGTTTTGAAGCAAAGAGGGTCTGCGTGCCACCTCCATCCAAGTCAGAGCGCTGCCCCAACCTAGACCACCCGGAATCCACCCGG...
Task1_train_13127
The gene NR5A1 (nuclear receptor subfamily 5 group A member 1), on Chromosome 9, contains a mutation. Does this mutation cause a disorder, or is it a benign change?
Pathogenic; 46,XY sex reversal 3
GACAGTGAGATGAGGGTGGCACACAGTAGGTGCCCCTTAAATGGCTGCTCCTTCTGCCCCAAGATGGGGGCTGAGCTGGCATGGCCAGCATGCAACAGGCAGAGAGGCTACAGCATCCCCCTGGCCTCCCAGTGCCTCAGGGTCCCAGGGATGAGGTGGGTCCCAAACCCCAACAGTGCCTGGTGTCCCCCCACCCGGCCCCGCCACCCACCTGCCTCCTCAGAGTTTTGAAGCAAAGAGGGTCTGCGTGCCACCTCCATCCAAGTCAGAGCGCTGCCCCAACCTAGACCACCCGGAATCCACCCGGGCCGTTCTGCTTT...
GACAGTGAGATGAGGGTGGCACACAGTAGGTGCCCCTTAAATGGCTGCTCCTTCTGCCCCAAGATGGGGGCTGAGCTGGCATGGCCAGCATGCAACAGGCAGAGAGGCTACAGCATCCCCCTGGCCTCCCAGTGCCTCAGGGTCCCAGGGATGAGGTGGGTCCCAAACCCCAACAGTGCCTGGTGTCCCCCCACCCGGCCCCGCCACCCACCTGCCTCCTCAGAGTTTTGAAGCAAAGAGGGTCTGCGTGCCACCTCCATCCAAGTCAGAGCGCTGCCCCAACCTAGACCACCCGGAATCCACCCGGGCCGTTCTGCTTT...
Task1_train_13128
Chromosome 9 houses a mutation in gene NR5A1 (nuclear receptor subfamily 5 group A member 1). Classify its clinical impact — is it pathogenic or benign, and what disease does it lead to if any?
Pathogenic; Non-obstructive azoospermia
GCTATGCACAGGGCTTTGGTGGGAAGAGGGGCTGGGGGCCAAGACAATGTCCCTGCCCTTCAGGGGACACCCAAGGACAGACAGAGCCCTGGCAAAGGAGCCTGCTGGCTGATAGCCCACCCTCCACCTACCCCTCCTTAAGGCCCTCCCAGTGGCCTTGTGATGGCAGCCAGGTCAAGAACTCTCACCTTACAAACCACCCGGACTCCCGCGGACACACACTCCAATTCTAGGTGCCTCCAAGCACCACCCTTCCCCACAAATTACTCATGTTCCCAGATCTCCCGGTCCATCCCCAGTCACACACAAACTCTTCACAC...
GCTATGCACAGGGCTTTGGTGGGAAGAGGGGCTGGGGGCCAAGACAATGTCCCTGCCCTTCAGGGGACACCCAAGGACAGACAGAGCCCTGGCAAAGGAGCCTGCTGGCTGATAGCCCACCCTCCACCTACCCCTCCTTAAGGCCCTCCCAGTGGCCTTGTGATGGCAGCCAGGTCAAGAACTCTCACCTTACAAACCACCCGGACTCCCGCGGACACACACTCCAATTCTAGGTGCCTCCAAGCACCACCCTTCCCCACAAATTACTCATGTTCCCAGATCTCCCGGTCCATCCCCAGTCACACACAAACTCTTCACAC...
Task1_train_13129
The gene NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9 carries this variant. Does this mutation lead to a specific disease, or is it non-pathogenic?
Pathogenic; Male infertility
GCTATGCACAGGGCTTTGGTGGGAAGAGGGGCTGGGGGCCAAGACAATGTCCCTGCCCTTCAGGGGACACCCAAGGACAGACAGAGCCCTGGCAAAGGAGCCTGCTGGCTGATAGCCCACCCTCCACCTACCCCTCCTTAAGGCCCTCCCAGTGGCCTTGTGATGGCAGCCAGGTCAAGAACTCTCACCTTACAAACCACCCGGACTCCCGCGGACACACACTCCAATTCTAGGTGCCTCCAAGCACCACCCTTCCCCACAAATTACTCATGTTCCCAGATCTCCCGGTCCATCCCCAGTCACACACAAACTCTTCACAC...
GCTATGCACAGGGCTTTGGTGGGAAGAGGGGCTGGGGGCCAAGACAATGTCCCTGCCCTTCAGGGGACACCCAAGGACAGACAGAGCCCTGGCAAAGGAGCCTGCTGGCTGATAGCCCACCCTCCACCTACCCCTCCTTAAGGCCCTCCCAGTGGCCTTGTGATGGCAGCCAGGTCAAGAACTCTCACCTTACAAACCACCCGGACTCCCGCGGACACACACTCCAATTCTAGGTGCCTCCAAGCACCACCCTTCCCCACAAATTACTCATGTTCCCAGATCTCCCGGTCCATCCCCAGTCACACACAAACTCTTCACAC...
Task1_train_13130
Assess the clinical impact of this variant on gene NR5A1 (nuclear receptor subfamily 5 group A member 1), found on Chromosome 9. State whether it’s pathogenic or benign, and the disease if applicable.
Pathogenic; 46,XY sex reversal 3
TGCACAGGGCTTTGGTGGGAAGAGGGGCTGGGGGCCAAGACAATGTCCCTGCCCTTCAGGGGACACCCAAGGACAGACAGAGCCCTGGCAAAGGAGCCTGCTGGCTGATAGCCCACCCTCCACCTACCCCTCCTTAAGGCCCTCCCAGTGGCCTTGTGATGGCAGCCAGGTCAAGAACTCTCACCTTACAAACCACCCGGACTCCCGCGGACACACACTCCAATTCTAGGTGCCTCCAAGCACCACCCTTCCCCACAAATTACTCATGTTCCCAGATCTCCCGGTCCATCCCCAGTCACACACAAACTCTTCACACAGGC...
TGCACAGGGCTTTGGTGGGAAGAGGGGCTGGGGGCCAAGACAATGTCCCTGCCCTTCAGGGGACACCCAAGGACAGACAGAGCCCTGGCAAAGGAGCCTGCTGGCTGATAGCCCACCCTCCACCTACCCCTCCTTAAGGCCCTCCCAGTGGCCTTGTGATGGCAGCCAGGTCAAGAACTCTCACCTTACAAACCACCCGGACTCCCGCGGACACACACTCCAATTCTAGGTGCCTCCAAGCACCACCCTTCCCCACAAATTACTCATGTTCCCAGATCTCCCGGTCCATCCCCAGTCACACACAAACTCTTCACACAGGC...
Task1_train_13131
Located on Chromosome 9, this mutation impacts NR5A1 (nuclear receptor subfamily 5 group A member 1). What is its biological consequence — is it benign or pathogenic, and which disease is associated if any?
Pathogenic; 46,XY sex reversal 3
GCCACAGCAGGGCTACCTCTCCAGCCTCACCCACCCTCCCACCCACCCGCCTCTGGCTGTCTCCACCTCTCTGTCACTGGAGCTGCACTCACCCAGGCTGAAGAGGATGATGAACTTGAGGCAGACAAACTCCTGCCGGTCCAGCTGCAGCGCAAGCAGCTGCAGCACCAGCTCCTGCGCCCGCAACACCAGGCTGTGCAGCAGCGAGCCCGCCTGGGTGGCCACTGTGGTCAGCTCCACCTGGGGGCAGAGGGCACGGGGCGGGGGACAGTCAGAGGACGTGGGTCCGGGCAGGTGGCTCTCTGATGGGGGATGCAGGG...
GCCACAGCAGGGCTACCTCTCCAGCCTCACCCACCCTCCCACCCACCCGCCTCTGGCTGTCTCCACCTCTCTGTCACTGGAGCTGCACTCACCCAGGCTGAAGAGGATGATGAACTTGAGGCAGACAAACTCCTGCCGGTCCAGCTGCAGCGCAAGCAGCTGCAGCACCAGCTCCTGCGCCCGCAACACCAGGCTGTGCAGCAGCGAGCCCGCCTGGGTGGCCACTGTGGTCAGCTCCACCTGGGGGCAGAGGGCACGGGGCGGGGGACAGTCAGAGGACGTGGGTCCGGGCAGGTGGCTCTCTGATGGGGGATGCAGGG...
Task1_train_13132
This mutation is located in gene NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9. Is it associated with a disease or is it a benign polymorphism?
Pathogenic; Premature ovarian failure 7
ATGATGAACTTGAGGCAGACAAACTCCTGCCGGTCCAGCTGCAGCGCAAGCAGCTGCAGCACCAGCTCCTGCGCCCGCAACACCAGGCTGTGCAGCAGCGAGCCCGCCTGGGTGGCCACTGTGGTCAGCTCCACCTGGGGGCAGAGGGCACGGGGCGGGGGACAGTCAGAGGACGTGGGTCCGGGCAGGTGGCTCTCTGATGGGGGATGCAGGGCTGAGGGCATGGATTGGAGGTGCAGGTCAGATGGGCTGGCGTCAGGAGGGCCCAGCCTTGGTGCCGAGCCAGGCACGGGTAACATCTGCACAGCCCCGGGGACGCT...
ATGATGAACTTGAGGCAGACAAACTCCTGCCGGTCCAGCTGCAGCGCAAGCAGCTGCAGCACCAGCTCCTGCGCCCGCAACACCAGGCTGTGCAGCAGCGAGCCCGCCTGGGTGGCCACTGTGGTCAGCTCCACCTGGGGGCAGAGGGCACGGGGCGGGGGACAGTCAGAGGACGTGGGTCCGGGCAGGTGGCTCTCTGATGGGGGATGCAGGGCTGAGGGCATGGATTGGAGGTGCAGGTCAGATGGGCTGGCGTCAGGAGGGCCCAGCCTTGGTGCCGAGCCAGGCACGGGTAACATCTGCACAGCCCCGGGGACGCT...
Task1_train_13133
The variant affects gene NR5A1 (nuclear receptor subfamily 5 group A member 1), which is on Chromosome 9. Please evaluate whether this mutation is benign or pathogenic and specify the disease if necessary.
Pathogenic; 46,XY sex reversal 3
ATGATGAACTTGAGGCAGACAAACTCCTGCCGGTCCAGCTGCAGCGCAAGCAGCTGCAGCACCAGCTCCTGCGCCCGCAACACCAGGCTGTGCAGCAGCGAGCCCGCCTGGGTGGCCACTGTGGTCAGCTCCACCTGGGGGCAGAGGGCACGGGGCGGGGGACAGTCAGAGGACGTGGGTCCGGGCAGGTGGCTCTCTGATGGGGGATGCAGGGCTGAGGGCATGGATTGGAGGTGCAGGTCAGATGGGCTGGCGTCAGGAGGGCCCAGCCTTGGTGCCGAGCCAGGCACGGGTAACATCTGCACAGCCCCGGGGACGCT...
ATGATGAACTTGAGGCAGACAAACTCCTGCCGGTCCAGCTGCAGCGCAAGCAGCTGCAGCACCAGCTCCTGCGCCCGCAACACCAGGCTGTGCAGCAGCGAGCCCGCCTGGGTGGCCACTGTGGTCAGCTCCACCTGGGGGCAGAGGGCACGGGGCGGGGGACAGTCAGAGGACGTGGGTCCGGGCAGGTGGCTCTCTGATGGGGGATGCAGGGCTGAGGGCATGGATTGGAGGTGCAGGTCAGATGGGCTGGCGTCAGGAGGGCCCAGCCTTGGTGCCGAGCCAGGCACGGGTAACATCTGCACAGCCCCGGGGACGCT...
Task1_train_13134
The gene NR5A1 (nuclear receptor subfamily 5 group A member 1), on Chromosome 9, contains a mutation. Does this mutation cause a disorder, or is it a benign change?
Pathogenic; ADRENAL INSUFFICIENCY, NR5A1-RELATED
CTAGAAGAGACGCCGGAGTCACCCACACCCCTCCCACTTTTCTGTCTCCTCACCTCTGGACTTTGCAAAGAGACACCAGCCCAGGGTCCACTGGACCAGTGGAAAAGAACTTCCACATGGCTTACGAGAGGCGCTCTAAGGGCTGGGCTGGTACTTATCTGCAAGGCCCCTTTAGAGAAGCTGGTGACCACTGCTCATAATCCCGGGCTCAATTCAAAGACTTTGAGAAGGGGAAGCAGGAAGGTTTGGACCACGGAGAAGCCAGAAGCAGGAAAAAACACTCAGCAAAGCTGGGACAAAAGCCCTTCCCATCCTGCGTG...
CTAGAAGAGACGCCGGAGTCACCCACACCCCTCCCACTTTTCTGTCTCCTCACCTCTGGACTTTGCAAAGAGACACCAGCCCAGGGTCCACTGGACCAGTGGAAAAGAACTTCCACATGGCTTACGAGAGGCGCTCTAAGGGCTGGGCTGGTACTTATCTGCAAGGCCCCTTTAGAGAAGCTGGTGACCACTGCTCATAATCCCGGGCTCAATTCAAAGACTTTGAGAAGGGGAAGCAGGAAGGTTTGGACCACGGAGAAGCCAGAAGCAGGAAAAAACACTCAGCAAAGCTGGGACAAAAGCCCTTCCCATCCTGCGTG...
Task1_train_13135
Given this variant in gene NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9, classify it as benign or pathogenic. Include the disorder it may cause if applicable.
Pathogenic; Spermatogenic failure 8
GCGCTCTAAGGGCTGGGCTGGTACTTATCTGCAAGGCCCCTTTAGAGAAGCTGGTGACCACTGCTCATAATCCCGGGCTCAATTCAAAGACTTTGAGAAGGGGAAGCAGGAAGGTTTGGACCACGGAGAAGCCAGAAGCAGGAAAAAACACTCAGCAAAGCTGGGACAAAAGCCCTTCCCATCCTGCGTGAAAATCCCCGGGAGACTAGGAAGGCAGCCAGAGGAAGTGCCCTGCCCCTCAATCCAGGGTTCTGGAAGGCCGGGAATGCCCTGCTCCTCCTCCCCTCTGCACGGGGGGTGCATGGGAAGTCTGGAGGGAA...
GCGCTCTAAGGGCTGGGCTGGTACTTATCTGCAAGGCCCCTTTAGAGAAGCTGGTGACCACTGCTCATAATCCCGGGCTCAATTCAAAGACTTTGAGAAGGGGAAGCAGGAAGGTTTGGACCACGGAGAAGCCAGAAGCAGGAAAAAACACTCAGCAAAGCTGGGACAAAAGCCCTTCCCATCCTGCGTGAAAATCCCCGGGAGACTAGGAAGGCAGCCAGAGGAAGTGCCCTGCCCCTCAATCCAGGGTTCTGGAAGGCCGGGAATGCCCTGCTCCTCCTCCCCTCTGCACGGGGGGTGCATGGGAAGTCTGGAGGGAA...
Task1_train_13136
A mutation on Chromosome 9 affecting NR5A1 (nuclear receptor subfamily 5 group A member 1) has been found. Is it harmful or harmless? What disease, if any, does it cause?
Pathogenic; Spermatogenic failure 8
TCCAGGGTTCTGGAAGGCCGGGAATGCCCTGCTCCTCCTCCCCTCTGCACGGGGGGTGCATGGGAAGTCTGGAGGGAAGCTAGCAACCAACCCAAGATGCTTGGGGTCCTCATCCCCACCAGGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCAT...
TCCAGGGTTCTGGAAGGCCGGGAATGCCCTGCTCCTCCTCCCCTCTGCACGGGGGGTGCATGGGAAGTCTGGAGGGAAGCTAGCAACCAACCCAAGATGCTTGGGGTCCTCATCCCCACCAGGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCAT...
Task1_train_13137
This genomic variant is located on Chromosome 9, within the NR5A1 (nuclear receptor subfamily 5 group A member 1) gene. Can you determine its pathogenicity and name any linked disease?
Pathogenic; 46,XY sex reversal 3
ACCAGGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATG...
ACCAGGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATG...
Task1_train_13138
Gene NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9 is altered by this variant. Does this mutation result in a disease or is it benign?
Pathogenic; ADRENAL INSUFFICIENCY, NR5A1-RELATED
ACCAGGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATG...
ACCAGGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATG...
Task1_train_13139
A variant found in Chromosome 9 affects NR5A1 (nuclear receptor subfamily 5 group A member 1). Please analyze its biological impact: is it benign or pathogenic, and what condition might it cause?
Pathogenic; 46,XX sex reversal 4
ACCAGGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATG...
ACCAGGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATG...
Task1_train_13140
This is a variant in NR5A1 (nuclear receptor subfamily 5 group A member 1), located on Chromosome 9. Is this mutation a likely cause of disease or not?
Pathogenic; not provided
GGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATGCCCC...
GGGCCTCCAGCCATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATGCCCC...
Task1_train_13141
This genomic variant is located on Chromosome 9, within the NR5A1 (nuclear receptor subfamily 5 group A member 1) gene. Can you determine its pathogenicity and name any linked disease?
Pathogenic; 46,XY sex reversal 3
ATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATGCCCCTGGAGGAAGCCC...
ATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATGCCCCTGGAGGAAGCCC...
Task1_train_13142
The gene NR5A1 (nuclear receptor subfamily 5 group A member 1) is located on Chromosome 9, where a mutation has occurred. What is the medical relevance of this mutation?
Pathogenic; 46,XY disorder of sex development
ATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATGCCCCTGGAGGAAGCCC...
ATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATGCCCCTGGAGGAAGCCC...
Task1_train_13143
This sequence change occurs on Chromosome 9, altering NR5A1 (nuclear receptor subfamily 5 group A member 1). What is the medical significance of this variant — is it benign or linked to a disease?
Pathogenic; Oligosynaptic infertility
ATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATGCCCCTGGAGGAAGCCC...
ATGAGCAGAAGGCAGGTGGGAGTATTCAAGACCCTGCCTTTTGCCTCATCCATTAGGTCGGACCAGAGAGGCGGGCAGTGTTGAGAAGGGGCTGGGGTGAGAAACCCACCCCATGACAGACACATGGTACATCCCCAGGCCTCAGCCATGACAGGCGCTCCACGGTGGAAGCCGTAGCCACCACCATCAATCCTCGACTCCCAGATGGCCCAGGCCCCAGTCCCGCGATGCCCCTAGGGCTCGGAGCACCCACCCCCACCTACCAGCCAGGGCAGGCAGTGCCCCCAGCCCATCCGGCCTCATGCCCCTGGAGGAAGCCC...
Task1_train_13144
A sequence alteration has been identified in NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9. Is it disease-inducing or harmless?
Pathogenic; 46,XY sex reversal 3
GAACACCCAGCCTCAATGTCACTACTTCCAGGAAGCACTCCTGGATTCATGCAAACGGGCTCTACTGTCCTTGCCCCAGGTGCCCTGTCCTTGCCCACTCTTATCATGCTGAGTGGATCATGCCATGTGCTCCTGCGGGCTAAGTTCTGGGCTCAGGTGTCTAGCATAAGGCCTGGCAGGGAGATGGTGACCGGAAGGGGACCCTGGTCAGCCTTGTTCACCGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAA...
GAACACCCAGCCTCAATGTCACTACTTCCAGGAAGCACTCCTGGATTCATGCAAACGGGCTCTACTGTCCTTGCCCCAGGTGCCCTGTCCTTGCCCACTCTTATCATGCTGAGTGGATCATGCCATGTGCTCCTGCGGGCTAAGTTCTGGGCTCAGGTGTCTAGCATAAGGCCTGGCAGGGAGATGGTGACCGGAAGGGGACCCTGGTCAGCCTTGTTCACCGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAA...
Task1_train_13145
The gene NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9 contains a mutation. Based on this information, is the variant pathogenic or benign? Provide the disease if relevant.
Pathogenic; Disorder of sexual differentiation
TGTCACTACTTCCAGGAAGCACTCCTGGATTCATGCAAACGGGCTCTACTGTCCTTGCCCCAGGTGCCCTGTCCTTGCCCACTCTTATCATGCTGAGTGGATCATGCCATGTGCTCCTGCGGGCTAAGTTCTGGGCTCAGGTGTCTAGCATAAGGCCTGGCAGGGAGATGGTGACCGGAAGGGGACCCTGGTCAGCCTTGTTCACCGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTG...
TGTCACTACTTCCAGGAAGCACTCCTGGATTCATGCAAACGGGCTCTACTGTCCTTGCCCCAGGTGCCCTGTCCTTGCCCACTCTTATCATGCTGAGTGGATCATGCCATGTGCTCCTGCGGGCTAAGTTCTGGGCTCAGGTGTCTAGCATAAGGCCTGGCAGGGAGATGGTGACCGGAAGGGGACCCTGGTCAGCCTTGTTCACCGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTG...
Task1_train_13146
Here is a mutation in NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9. Determine whether it’s benign or pathogenic. If the latter, what disease does it cause?
Pathogenic; Disorder of sexual differentiation
TCCTGCGGGCTAAGTTCTGGGCTCAGGTGTCTAGCATAAGGCCTGGCAGGGAGATGGTGACCGGAAGGGGACCCTGGTCAGCCTTGTTCACCGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGT...
TCCTGCGGGCTAAGTTCTGGGCTCAGGTGTCTAGCATAAGGCCTGGCAGGGAGATGGTGACCGGAAGGGGACCCTGGTCAGCCTTGTTCACCGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGT...
Task1_train_13147
A variant was discovered on Chromosome 9, affecting NR5A1 (nuclear receptor subfamily 5 group A member 1). What is its functional impact — neutral or pathogenic? State the disease if pathogenic.
Pathogenic; not provided
GCCTTGTTCACCGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGC...
GCCTTGTTCACCGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGC...
Task1_train_13148
Gene NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9 is impacted by this variant. Evaluate whether it is clinically benign or pathogenic and name the disorder if relevant.
Pathogenic; Oligosynaptic infertility
CGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGAT...
CGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGAT...
Task1_train_13149
The following genetic variant occurs in NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9. Classify its clinical effect — pathogenic or benign — and list any associated condition.
Pathogenic; 46,XY disorder of sex development
CGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGAT...
CGCTGGCCCCAGGGTCCAGCTGTTTGTTGACTGACTGCCTGACTGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGAT...
Task1_train_13150
Gene NR5A1 (nuclear receptor subfamily 5 group A member 1), found on Chromosome 9, is impacted by this variant. What is the biological outcome — benign or pathogenic?
Pathogenic; 46,XY sex reversal 3
TGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGATGATGGCTGGGGGGCTGCCTGGCCAATCTTCCTGCCCCCTGGGG...
TGTTGAGCTCCTGCTTCAAAATGACTCAAGTATCCTTCACTGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGATGATGGCTGGGGGGCTGCCTGGCCAATCTTCCTGCCCCCTGGGG...
Task1_train_13151
Chromosome 9 houses a mutation in gene NR5A1 (nuclear receptor subfamily 5 group A member 1). Classify its clinical impact — is it pathogenic or benign, and what disease does it lead to if any?
Pathogenic; Premature ovarian failure 7
TGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGATGATGGCTGGGGGGCTGCCTGGCCAATCTTCCTGCCCCCTGGGGTGGGCAGCGCTGTGCTGCTCGCAGGCTGCACGGGAGTTTC...
TGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGATGATGGCTGGGGGGCTGCCTGGCCAATCTTCCTGCCCCCTGGGGTGGGCAGCGCTGTGCTGCTCGCAGGCTGCACGGGAGTTTC...
Task1_train_13152
Gene NR5A1 (nuclear receptor subfamily 5 group A member 1) on Chromosome 9 is altered by this variant. Does this mutation result in a disease or is it benign?
Pathogenic; 46,XY sex reversal 3
TGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGATGATGGCTGGGGGGCTGCCTGGCCAATCTTCCTGCCCCCTGGGGTGGGCAGCGCTGTGCTGCTCGCAGGCTGCACGGGAGTTTC...
TGGCTGCGAATGTGAAGCCAAGTTTAGAGCTGGCCAAGGCTCTATGCTGGGGGAGGGGACCTCTCTTGCCGACTAGAAGCTCCTCCGCCTGGCGAGGAATGTGTCATCAGCCAGACCCAACAGGTACATCTCTGCAGCTGGAGTGTGCCCCCCGCCCCTGCTCAGACAGGGCCCCACCCTGGGATCTGGGCGAGGGGAAAGAGCAGGAGAGAGGGGGTGGTGGTGCTCAGCAGGGATGATGGCTGGGGGGCTGCCTGGCCAATCTTCCTGCCCCCTGGGGTGGGCAGCGCTGTGCTGCTCGCAGGCTGCACGGGAGTTTC...
Task1_train_13153
A change on Chromosome 9 affects gene RPL35 (ribosomal protein L35). Identify whether the variant is neutral or disease-linked. Mention the disease if applicable.
Pathogenic; Diamond-Blackfan anemia 19
GAGGATGTCACCAGTCTTGCCCTCCCAGCTCAAACCCTCCACTGGTTCCCATGGCCCATGCCCACAGCAGGCAACCAAGGCTGCCCCCACCTGGCCACAGCCGCCTCTCCAGGCTTCCTTGCACACAGCAGCCCTCAGGCTTTTTGCACGAGGTCCCCCTTTCCTGGACTGTCAAGGCCAGGTAGCCGGCTGCCCTCTGCTGCCTTCTGCAGCTCAGGGCTCTCTCTAGTCCGGCCAGATGCTGCGCCTCTTAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCACGGTGAACTGCCTGGTGAGCCTAC...
GAGGATGTCACCAGTCTTGCCCTCCCAGCTCAAACCCTCCACTGGTTCCCATGGCCCATGCCCACAGCAGGCAACCAAGGCTGCCCCCACCTGGCCACAGCCGCCTCTCCAGGCTTCCTTGCACACAGCAGCCCTCAGGCTTTTTGCACGAGGTCCCCCTTTCCTGGACTGTCAAGGCCAGGTAGCCGGCTGCCCTCTGCTGCCTTCTGCAGCTCAGGGCTCTCTCTAGTCCGGCCAGATGCTGCGCCTCTTAGTTGGGCACCGTGACTCCATCCAGAGCAGCGACTTCTCACCCACGGTGAACTGCCTGGTGAGCCTAC...
Task1_train_13154
This alteration occurs within gene LMX1B (LIM homeobox transcription factor 1 beta) located on Chromosome 9. Is it associated with a disease or is it a benign variant?
Pathogenic; not provided
GCCGGCCCTCTCCGCGGACCAAGCGGCCCCGAGCAGGCGCCGCCGCCCGGGGGACTCCGACTCAGCCCCCGCGACCTACCTCGGCCGACAGTCGGGGGTTCCCAAGCGGCCACTCCCGGCCGGCGCCGTCCCCTGGCGGAGCCGCCGCGCTCCCTGCCGTCCGCGCAGTCTGGCCTCGCTCGGGGCCACTCCTCGTAGCGCTGGAGCTTTACAAAATATTAATAATAAAGAAGGCAGAGGAGAAAAAAGAAAGCCTTCGCTCCCCAACTCCCAAATCAATTTTTCAAGGGGGTGGAGCAGAGGGATTTGTTTCGAAGACG...
GCCGGCCCTCTCCGCGGACCAAGCGGCCCCGAGCAGGCGCCGCCGCCCGGGGGACTCCGACTCAGCCCCCGCGACCTACCTCGGCCGACAGTCGGGGGTTCCCAAGCGGCCACTCCCGGCCGGCGCCGTCCCCTGGCGGAGCCGCCGCGCTCCCTGCCGTCCGCGCAGTCTGGCCTCGCTCGGGGCCACTCCTCGTAGCGCTGGAGCTTTACAAAATATTAATAATAAAGAAGGCAGAGGAGAAAAAAGAAAGCCTTCGCTCCCCAACTCCCAAATCAATTTTTCAAGGGGGTGGAGCAGAGGGATTTGTTTCGAAGACG...
Task1_train_13155
This alteration occurs within gene LMX1B (LIM homeobox transcription factor 1 beta) located on Chromosome 9. Is it associated with a disease or is it a benign variant?
Pathogenic; Nail-patella syndrome
CCGGCCCTCTCCGCGGACCAAGCGGCCCCGAGCAGGCGCCGCCGCCCGGGGGACTCCGACTCAGCCCCCGCGACCTACCTCGGCCGACAGTCGGGGGTTCCCAAGCGGCCACTCCCGGCCGGCGCCGTCCCCTGGCGGAGCCGCCGCGCTCCCTGCCGTCCGCGCAGTCTGGCCTCGCTCGGGGCCACTCCTCGTAGCGCTGGAGCTTTACAAAATATTAATAATAAAGAAGGCAGAGGAGAAAAAAGAAAGCCTTCGCTCCCCAACTCCCAAATCAATTTTTCAAGGGGGTGGAGCAGAGGGATTTGTTTCGAAGACGA...
CCGGCCCTCTCCGCGGACCAAGCGGCCCCGAGCAGGCGCCGCCGCCCGGGGGACTCCGACTCAGCCCCCGCGACCTACCTCGGCCGACAGTCGGGGGTTCCCAAGCGGCCACTCCCGGCCGGCGCCGTCCCCTGGCGGAGCCGCCGCGCTCCCTGCCGTCCGCGCAGTCTGGCCTCGCTCGGGGCCACTCCTCGTAGCGCTGGAGCTTTACAAAATATTAATAATAAAGAAGGCAGAGGAGAAAAAAGAAAGCCTTCGCTCCCCAACTCCCAAATCAATTTTTCAAGGGGGTGGAGCAGAGGGATTTGTTTCGAAGACGA...
Task1_train_13156
The following genetic variant occurs in LMX1B (LIM homeobox transcription factor 1 beta) on Chromosome 9. Classify its clinical effect — pathogenic or benign — and list any associated condition.
Pathogenic; not provided
CCCGCGACCTACCTCGGCCGACAGTCGGGGGTTCCCAAGCGGCCACTCCCGGCCGGCGCCGTCCCCTGGCGGAGCCGCCGCGCTCCCTGCCGTCCGCGCAGTCTGGCCTCGCTCGGGGCCACTCCTCGTAGCGCTGGAGCTTTACAAAATATTAATAATAAAGAAGGCAGAGGAGAAAAAAGAAAGCCTTCGCTCCCCAACTCCCAAATCAATTTTTCAAGGGGGTGGAGCAGAGGGATTTGTTTCGAAGACGATCAAAACTTCTGCGAGGGGCCCGCGGGGCGGCCGGGCCGGGGAGCCGGGGCCTGAGCTCGGGGCCA...
CCCGCGACCTACCTCGGCCGACAGTCGGGGGTTCCCAAGCGGCCACTCCCGGCCGGCGCCGTCCCCTGGCGGAGCCGCCGCGCTCCCTGCCGTCCGCGCAGTCTGGCCTCGCTCGGGGCCACTCCTCGTAGCGCTGGAGCTTTACAAAATATTAATAATAAAGAAGGCAGAGGAGAAAAAAGAAAGCCTTCGCTCCCCAACTCCCAAATCAATTTTTCAAGGGGGTGGAGCAGAGGGATTTGTTTCGAAGACGATCAAAACTTCTGCGAGGGGCCCGCGGGGCGGCCGGGCCGGGGAGCCGGGGCCTGAGCTCGGGGCCA...
Task1_train_13157
Given a variant located on Chromosome 9 and affecting LMX1B (LIM homeobox transcription factor 1 beta), assess whether it is benign or pathogenic. Indicate the associated disease if pathogenic.
Pathogenic; Nail-patella syndrome
CAGGCCTTTACTCACCTACTCTGTAAACACTCACGGAGGCCCCCTTGAGGATCAGATGGGGCCAGGTCCTGTCTCATGGAACCCTGGTAGAGGTGGTAGAGTTGGGCACCAACAGGGACATGCATTGTCATTCTGCTGTGATACCCGTGTACTGAGTTACATGCTCAGCATCCTCGAATCCTGACAACAGCCTTCAGGAAGGGCTTGACATCTCCATTTTACAGGAGTAAACTGAGGTGGGGGACGCTGAGGGGAGCATAGAGGAGGCTACCTCCCCCAGACTGGGGCATCAGAGAAGGCTTCCCAGAGGAGGTGGCATT...
CAGGCCTTTACTCACCTACTCTGTAAACACTCACGGAGGCCCCCTTGAGGATCAGATGGGGCCAGGTCCTGTCTCATGGAACCCTGGTAGAGGTGGTAGAGTTGGGCACCAACAGGGACATGCATTGTCATTCTGCTGTGATACCCGTGTACTGAGTTACATGCTCAGCATCCTCGAATCCTGACAACAGCCTTCAGGAAGGGCTTGACATCTCCATTTTACAGGAGTAAACTGAGGTGGGGGACGCTGAGGGGAGCATAGAGGAGGCTACCTCCCCCAGACTGGGGCATCAGAGAAGGCTTCCCAGAGGAGGTGGCATT...
Task1_train_13158
This sequence change occurs on Chromosome 9, altering LMX1B (LIM homeobox transcription factor 1 beta). What is the medical significance of this variant — is it benign or linked to a disease?
Pathogenic; not provided
TCCTGTCTCATGGAACCCTGGTAGAGGTGGTAGAGTTGGGCACCAACAGGGACATGCATTGTCATTCTGCTGTGATACCCGTGTACTGAGTTACATGCTCAGCATCCTCGAATCCTGACAACAGCCTTCAGGAAGGGCTTGACATCTCCATTTTACAGGAGTAAACTGAGGTGGGGGACGCTGAGGGGAGCATAGAGGAGGCTACCTCCCCCAGACTGGGGCATCAGAGAAGGCTTCCCAGAGGAGGTGGCATTGGAGTTGGGCATTGCAGGATGAGTAGGAGCCTGCTGGGTAGAATAGAGGTGGGTGGCAGGGGTTGC...
TCCTGTCTCATGGAACCCTGGTAGAGGTGGTAGAGTTGGGCACCAACAGGGACATGCATTGTCATTCTGCTGTGATACCCGTGTACTGAGTTACATGCTCAGCATCCTCGAATCCTGACAACAGCCTTCAGGAAGGGCTTGACATCTCCATTTTACAGGAGTAAACTGAGGTGGGGGACGCTGAGGGGAGCATAGAGGAGGCTACCTCCCCCAGACTGGGGCATCAGAGAAGGCTTCCCAGAGGAGGTGGCATTGGAGTTGGGCATTGCAGGATGAGTAGGAGCCTGCTGGGTAGAATAGAGGTGGGTGGCAGGGGTTGC...
Task1_train_13159
A mutation on Chromosome 9 affecting LMX1B (LIM homeobox transcription factor 1 beta) has been found. Is it harmful or harmless? What disease, if any, does it cause?
Pathogenic; Nail-patella syndrome
CAGATGCACACGCGCACTGACGTGTCCACCTGTGTGCACATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCC...
CAGATGCACACGCGCACTGACGTGTCCACCTGTGTGCACATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCC...
Task1_train_13160
The following genetic variant occurs in LMX1B (LIM homeobox transcription factor 1 beta) on Chromosome 9. Classify its clinical effect — pathogenic or benign — and list any associated condition.
Pathogenic; Nail-patella-like renal disease
CAGATGCACACGCGCACTGACGTGTCCACCTGTGTGCACATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCC...
CAGATGCACACGCGCACTGACGTGTCCACCTGTGTGCACATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCC...
Task1_train_13161
This alteration in LMX1B (LIM homeobox transcription factor 1 beta) on Chromosome 9 may affect gene function. Does it lead to a disease or is it benign?
Pathogenic; Nail-patella syndrome
CAGATGCACACGCGCACTGACGTGTCCACCTGTGTGCACATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCC...
CAGATGCACACGCGCACTGACGTGTCCACCTGTGTGCACATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCC...
Task1_train_13162
A variant has been detected on Chromosome 9 in LMX1B (LIM homeobox transcription factor 1 beta). What is its effect — pathogenic or benign? If pathogenic, name the disease.
Pathogenic; Nail-patella syndrome
CATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACAT...
CATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACAT...
Task1_train_13163
Here is a genetic alteration in LMX1B (LIM homeobox transcription factor 1 beta) on Chromosome 9. Based on the data, is it a benign variant or a cause of disease?
Pathogenic; Nail-patella syndrome
CATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACAT...
CATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACAT...
Task1_train_13164
Chromosome 9 houses a mutation in gene LMX1B (LIM homeobox transcription factor 1 beta). Classify its clinical impact — is it pathogenic or benign, and what disease does it lead to if any?
Pathogenic; Nail-patella-like renal disease
CATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACAT...
CATGATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACAT...
Task1_train_13165
A variant has been detected on Chromosome 9 in LMX1B (LIM homeobox transcription factor 1 beta). What is its effect — pathogenic or benign? If pathogenic, name the disease.
Pathogenic; Nail-patella syndrome
GATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTA...
GATACGAACATGCATCCCCCCAGGCACACTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTA...
Task1_train_13166
This sequence variant lies in LMX1B (LIM homeobox transcription factor 1 beta) on Chromosome 9. Is it clinically significant, and what condition might it cause if any?
Pathogenic; Nail-patella-like renal disease
CTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACA...
CTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACA...
Task1_train_13167
A genomic change on Chromosome 9 affects LMX1B (LIM homeobox transcription factor 1 beta). Classify this variant as benign or pathogenic, and name the disease if relevant.
Pathogenic; Nail-patella syndrome
CTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACA...
CTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACA...
Task1_train_13168
Gene LMX1B (LIM homeobox transcription factor 1 beta) on Chromosome 9 is altered by this variant. Does this mutation result in a disease or is it benign?
Pathogenic; Nail-patella syndrome
CTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACA...
CTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACA...
Task1_train_13169
Gene LMX1B (LIM homeobox transcription factor 1 beta), found on Chromosome 9, is impacted by this variant. What is the biological outcome — benign or pathogenic?
Pathogenic; Inherited focal segmental glomerulosclerosis
CTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACA...
CTACCCCTGAGACCTACGCATCCATACATATAAACATATGTGTGATCACATGTGTGCACACAAGCACATAAAATGCATGCAGGAATACCCCTACCCTGAGTATGGATACATGTACATGTATGTGGAGATATGTGTTCACATACCCGGGAATTCAAAAGCCACACCCAGGTCCACACACACAAGTGTACACACTTAAGCATACATACACATACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACA...
Task1_train_13170
Gene LMX1B (LIM homeobox transcription factor 1 beta) on Chromosome 9 is impacted by this variant. Evaluate whether it is clinically benign or pathogenic and name the disorder if relevant.
Pathogenic; Nail-patella syndrome
TACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTT...
TACACACATGACACAGCACACTTGTGCACTAAACACCGGTCCACATGGCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTT...
Task1_train_13171
A sequence alteration has been identified in LMX1B (LIM homeobox transcription factor 1 beta) on Chromosome 9. Is it disease-inducing or harmless?
Pathogenic; Nail-patella syndrome
GCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTTCCCAGCCGAAGGGAGGGGGCTGGGCCCTCTGTGCTGGAGGGAAAGAC...
GCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTTCCCAGCCGAAGGGAGGGGGCTGGGCCCTCTGTGCTGGAGGGAAAGAC...
Task1_train_13172
With a mutation on Chromosome 9 in gene LMX1B (LIM homeobox transcription factor 1 beta), classify this variant as benign or pathogenic. Include the disease if it's pathogenic.
Pathogenic; Nail-patella syndrome
GCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTTCCCAGCCGAAGGGAGGGGGCTGGGCCCTCTGTGCTGGAGGGAAAGAC...
GCTGCACATATATGTTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTTCCCAGCCGAAGGGAGGGGGCTGGGCCCTCTGTGCTGGAGGGAAAGAC...
Task1_train_13173
Gene LMX1B (LIM homeobox transcription factor 1 beta), found on Chromosome 9, is impacted by this variant. What is the biological outcome — benign or pathogenic?
Pathogenic; Nail-patella syndrome
TTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTTCCCAGCCGAAGGGAGGGGGCTGGGCCCTCTGTGCTGGAGGGAAAGACCCCATTTCCCAGGG...
TTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTTCCCAGCCGAAGGGAGGGGGCTGGGCCCTCTGTGCTGGAGGGAAAGACCCCATTTCCCAGGG...
Task1_train_13174
This mutation occurs in LMX1B (LIM homeobox transcription factor 1 beta) on Chromosome 9. Does this change lead to a known medical condition, or is it benign?
Pathogenic; Nail-patella-like renal disease
TTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTTCCCAGCCGAAGGGAGGGGGCTGGGCCCTCTGTGCTGGAGGGAAAGACCCCATTTCCCAGGG...
TTTGTCCACATGCTCACATGTACTGTGGATTGTGCTTGTGTGCACACACACACCTCTTGTTCTCTGGCCCACCCCCCTTACCCTCTCTGCCTTGATGGCCCCCCACCAACCCGCAGCCCAGCTCCACAGGGGTCTTCACCAGCACCCAGTCCACAGGCTGGGGATGCCTGAGAGGCAGGGAGATGATGTGCCTTCCCCTTCTCAGCCCCCTGGAGCCTTCAGCAGTGAGAAGCAAACAGCCTCGAGCCAGCCTCTGTTTCCCAGCCGAAGGGAGGGGGCTGGGCCCTCTGTGCTGGAGGGAAAGACCCCATTTCCCAGGG...
Task1_train_13175
This sequence variant lies in LRSAM1 (leucine rich repeat and sterile alpha motif containing 1) on Chromosome 9. Is it clinically significant, and what condition might it cause if any?
Pathogenic; Charcot-Marie-Tooth disease axonal type 2P
CCCACTTAACAAGCGCTGCGGCCATCCCTGCAGAGAGAGACTTCACTCCCATTCTGCAGATGGGAAATGAGGCTCAGAGAAGAGAAGAAGAGAGTGTGTGGCAAGGAGAGCACTTCCCTCAGATCTGAGAGCAGAGGCTCCCCCACCCTCCAGCTCACTCACCATGGGGATGGGCAGGGCCACAATGAGCCCCCAGGGGTTAGGGTCAGCGGAGATGACCCTGGCTCAGTCTGTCTGTCTGGTCCCCACAGAGCTGAAACCACCAATGGGTGAGGTCGTCACCCCTACGGCCCCCCAGGAGCCTCCTGAGTCTGTGAGGC...
CCCACTTAACAAGCGCTGCGGCCATCCCTGCAGAGAGAGACTTCACTCCCATTCTGCAGATGGGAAATGAGGCTCAGAGAAGAGAAGAAGAGAGTGTGTGGCAAGGAGAGCACTTCCCTCAGATCTGAGAGCAGAGGCTCCCCCACCCTCCAGCTCACTCACCATGGGGATGGGCAGGGCCACAATGAGCCCCCAGGGGTTAGGGTCAGCGGAGATGACCCTGGCTCAGTCTGTCTGTCTGGTCCCCACAGAGCTGAAACCACCAATGGGTGAGGTCGTCACCCCTACGGCCCCCCAGGAGCCTCCTGAGTCTGTGAGGC...
Task1_train_13176
A variant has been detected on Chromosome 9 in LRSAM1 (leucine rich repeat and sterile alpha motif containing 1). What is its effect — pathogenic or benign? If pathogenic, name the disease.
Pathogenic; Charcot-Marie-Tooth disease axonal type 2P
CCACTTAACAAGCGCTGCGGCCATCCCTGCAGAGAGAGACTTCACTCCCATTCTGCAGATGGGAAATGAGGCTCAGAGAAGAGAAGAAGAGAGTGTGTGGCAAGGAGAGCACTTCCCTCAGATCTGAGAGCAGAGGCTCCCCCACCCTCCAGCTCACTCACCATGGGGATGGGCAGGGCCACAATGAGCCCCCAGGGGTTAGGGTCAGCGGAGATGACCCTGGCTCAGTCTGTCTGTCTGGTCCCCACAGAGCTGAAACCACCAATGGGTGAGGTCGTCACCCCTACGGCCCCCCAGGAGCCTCCTGAGTCTGTGAGGCC...
CCACTTAACAAGCGCTGCGGCCATCCCTGCAGAGAGAGACTTCACTCCCATTCTGCAGATGGGAAATGAGGCTCAGAGAAGAGAAGAAGAGAGTGTGTGGCAAGGAGAGCACTTCCCTCAGATCTGAGAGCAGAGGCTCCCCCACCCTCCAGCTCACTCACCATGGGGATGGGCAGGGCCACAATGAGCCCCCAGGGGTTAGGGTCAGCGGAGATGACCCTGGCTCAGTCTGTCTGTCTGGTCCCCACAGAGCTGAAACCACCAATGGGTGAGGTCGTCACCCCTACGGCCCCCCAGGAGCCTCCTGAGTCTGTGAGGCC...
Task1_train_13177
This variant affects the gene LOC130002651, STXBP1 (ATAC-STARR-seq lymphoblastoid silent region 20307| syntaxin binding protein 1) found on Chromosome 9. What is the clinical effect of this variant — benign or pathogenic? State the disease if applicable.
Pathogenic; Early infantile epileptic encephalopathy with suppression bursts
CTGATATGTGCCAGCTGGCGAAGGAGGAAGCATGTGGCATTACCAGTGCATCCTAGGTCTCCCCATGTTTACACACTATCTCCTCCTCCAAATACACACAGGGGCTATCAATATGTTTCCTGGGCAAAAGGCAAGGCCCAGACATAGAGAGTTGACACATTAACGCCTCCTCTCTCTCTGAACCCATCTGAAGGTTCTGTTGGGGGTAGATTGGGGTGGTGGTGAGAAGATGGTCAAATCTGCTTGACTTGGGGCTGGCGACTGAAGTAGGACATGTAGCCTCTTGTCCTGGCTCAGCCACCACTGGCTTCTGTGACTTT...
CTGATATGTGCCAGCTGGCGAAGGAGGAAGCATGTGGCATTACCAGTGCATCCTAGGTCTCCCCATGTTTACACACTATCTCCTCCTCCAAATACACACAGGGGCTATCAATATGTTTCCTGGGCAAAAGGCAAGGCCCAGACATAGAGAGTTGACACATTAACGCCTCCTCTCTCTCTGAACCCATCTGAAGGTTCTGTTGGGGGTAGATTGGGGTGGTGGTGAGAAGATGGTCAAATCTGCTTGACTTGGGGCTGGCGACTGAAGTAGGACATGTAGCCTCTTGTCCTGGCTCAGCCACCACTGGCTTCTGTGACTTT...
Task1_train_13178
This genomic variant is located on Chromosome 9, within the LOC130002651, STXBP1 (ATAC-STARR-seq lymphoblastoid silent region 20307| syntaxin binding protein 1) gene. Can you determine its pathogenicity and name any linked disease?
Pathogenic; Developmental and epileptic encephalopathy, 4
CTGATATGTGCCAGCTGGCGAAGGAGGAAGCATGTGGCATTACCAGTGCATCCTAGGTCTCCCCATGTTTACACACTATCTCCTCCTCCAAATACACACAGGGGCTATCAATATGTTTCCTGGGCAAAAGGCAAGGCCCAGACATAGAGAGTTGACACATTAACGCCTCCTCTCTCTCTGAACCCATCTGAAGGTTCTGTTGGGGGTAGATTGGGGTGGTGGTGAGAAGATGGTCAAATCTGCTTGACTTGGGGCTGGCGACTGAAGTAGGACATGTAGCCTCTTGTCCTGGCTCAGCCACCACTGGCTTCTGTGACTTT...
CTGATATGTGCCAGCTGGCGAAGGAGGAAGCATGTGGCATTACCAGTGCATCCTAGGTCTCCCCATGTTTACACACTATCTCCTCCTCCAAATACACACAGGGGCTATCAATATGTTTCCTGGGCAAAAGGCAAGGCCCAGACATAGAGAGTTGACACATTAACGCCTCCTCTCTCTCTGAACCCATCTGAAGGTTCTGTTGGGGGTAGATTGGGGTGGTGGTGAGAAGATGGTCAAATCTGCTTGACTTGGGGCTGGCGACTGAAGTAGGACATGTAGCCTCTTGTCCTGGCTCAGCCACCACTGGCTTCTGTGACTTT...
Task1_train_13179
This variant affects the gene STXBP1 (syntaxin binding protein 1) found on Chromosome 9. What is the clinical effect of this variant — benign or pathogenic? State the disease if applicable.
Pathogenic; not provided
CTTATTGCAACCTCCGATTCCCTGGTTCAAGTGACTCTCCTGCCTCACCCTCCCAAGTGGCTGGGATTACAGGCATGCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCCTGACCTCGTGATTCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCTGGCCTGATTGTTTTTTAAGCACATGAGTAATACATTGAATTTTTTCTTTTCTTTTTTTTTTGAGATGGAGTCTGGCTCTGGGTCTGTCACCCAGGCT...
CTTATTGCAACCTCCGATTCCCTGGTTCAAGTGACTCTCCTGCCTCACCCTCCCAAGTGGCTGGGATTACAGGCATGCACCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGATGGTCTCGATCTCCTGACCTCGTGATTCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGTGCCTGGCCTGATTGTTTTTTAAGCACATGAGTAATACATTGAATTTTTTCTTTTCTTTTTTTTTTGAGATGGAGTCTGGCTCTGGGTCTGTCACCCAGGCT...
Task1_train_13180
A genetic alteration is present in STXBP1 (syntaxin binding protein 1) on Chromosome 9. Is this variant benign or disease-causing, and if the latter, which condition is involved?
Pathogenic; Developmental and epileptic encephalopathy, 4
AATCAGAAGGGGATGGAGTTGGAGGAAAGTTGTAGGCAGGAATGAGGGCTTTTGCTGTGTCCAGAGAGTACAGAATGCTCCTGGATTGGAGAAAGGTGATCTGCTCTGCCTCACATTTCATATGGTCTTGGTTAAGAATTCTGTTTGTCATAAAGCTTATCTTAAAGACCACCTGGTCAGGCAGTTAGCAGTGGAACTCTTTTGTTCAAACAAAATATTACCTGGAACCCGTTAGATAAAGCAGAGGAAGGTATAATTCTGCTGGCTCTGGGAGAGGAAGAAGAGGCCCTCTTGCCCCTTTGTGGCCATAAAGCATCTCC...
AATCAGAAGGGGATGGAGTTGGAGGAAAGTTGTAGGCAGGAATGAGGGCTTTTGCTGTGTCCAGAGAGTACAGAATGCTCCTGGATTGGAGAAAGGTGATCTGCTCTGCCTCACATTTCATATGGTCTTGGTTAAGAATTCTGTTTGTCATAAAGCTTATCTTAAAGACCACCTGGTCAGGCAGTTAGCAGTGGAACTCTTTTGTTCAAACAAAATATTACCTGGAACCCGTTAGATAAAGCAGAGGAAGGTATAATTCTGCTGGCTCTGGGAGAGGAAGAAGAGGCCCTCTTGCCCCTTTGTGGCCATAAAGCATCTCC...
Task1_train_13181
Here is a mutation in STXBP1 (syntaxin binding protein 1) on Chromosome 9. Determine whether it’s benign or pathogenic. If the latter, what disease does it cause?
Pathogenic; Early infantile epileptic encephalopathy with suppression bursts
ATCTGCTCGCCTTGGCTTCCCAAAGTGCTGGGATTACAGACGTGAGCTACTGTGCCCTGCCCCAAGTCAGTTTTAAGACTAGGCTTGCCCCTATTTTGAGTTTATGATGTTATTTTCTTCATTGAATTTTTGAAACTATTTTTTTCGTCTATCAAAGCAAAAACAGACAAAAAACACAAAAGTAAAGGAGAAAAACACTAAATGGAGCTAACAAGGATCTAAGAAAAGAGCAGTGACCTCCTGTCCTCCTATCTCCCATCCTCGGGGTCTATTACCCCAGAGGCAGCCACCTCGCCCTTCATTCTGGACATCTTTTTTAT...
ATCTGCTCGCCTTGGCTTCCCAAAGTGCTGGGATTACAGACGTGAGCTACTGTGCCCTGCCCCAAGTCAGTTTTAAGACTAGGCTTGCCCCTATTTTGAGTTTATGATGTTATTTTCTTCATTGAATTTTTGAAACTATTTTTTTCGTCTATCAAAGCAAAAACAGACAAAAAACACAAAAGTAAAGGAGAAAAACACTAAATGGAGCTAACAAGGATCTAAGAAAAGAGCAGTGACCTCCTGTCCTCCTATCTCCCATCCTCGGGGTCTATTACCCCAGAGGCAGCCACCTCGCCCTTCATTCTGGACATCTTTTTTAT...
Task1_train_13182
Gene STXBP1 (syntaxin binding protein 1) on Chromosome 9 is impacted by this variant. Evaluate whether it is clinically benign or pathogenic and name the disorder if relevant.
Pathogenic; Developmental and epileptic encephalopathy, 4
GTAGCTGGAATTATAGGCACATTCCAACATGCCTGGCTAATTTTTGTAGTTTTTTAGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACATCAAGTGATGTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCCAGCCCAGATTTCAGATTCTAACATCTTGGGCATGTTGAGACCATGGAATTCACTCCCAAGGAACGTGGTAACCTTAAGGAATGAGTGAATGATTCCCCCCGGTCCCCCACTGTAGATATTTATCTGCAACAGTCTGAAGGTAGCCTGTC...
GTAGCTGGAATTATAGGCACATTCCAACATGCCTGGCTAATTTTTGTAGTTTTTTAGTAGAGATGAGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACATCAAGTGATGTGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCCAGCCCAGATTTCAGATTCTAACATCTTGGGCATGTTGAGACCATGGAATTCACTCCCAAGGAACGTGGTAACCTTAAGGAATGAGTGAATGATTCCCCCCGGTCCCCCACTGTAGATATTTATCTGCAACAGTCTGAAGGTAGCCTGTC...
Task1_train_13183
Gene STXBP1 (syntaxin binding protein 1) on Chromosome 9 is impacted by this variant. Evaluate whether it is clinically benign or pathogenic and name the disorder if relevant.
Pathogenic; Early infantile epileptic encephalopathy with suppression bursts
GTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTACCTGTCTTGGTCTCCCAAAGTGCTGGGATTACAAGCATGAGCCACCACTCTCAGCCTTTTTTGTTTTTTTGGGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTTTGTTTTTTTTTTGAGACAGGTCTCTCTCCATCACCCAGGCTGGAGTGCAGTGTTGTGATCACAGTTCACTACAGCCCCGACCTCCGGGGCTTAAGTGATCCTCCCACCTCAGCCTCCCAAACAGCTGGGACTACAGGCACATGCCACCATGCCCAGCT...
GTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCTACCTGTCTTGGTCTCCCAAAGTGCTGGGATTACAAGCATGAGCCACCACTCTCAGCCTTTTTTGTTTTTTTGGGTTGTTGTTGTTGTTTTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTTTTGTTTTTTTTTTGAGACAGGTCTCTCTCCATCACCCAGGCTGGAGTGCAGTGTTGTGATCACAGTTCACTACAGCCCCGACCTCCGGGGCTTAAGTGATCCTCCCACCTCAGCCTCCCAAACAGCTGGGACTACAGGCACATGCCACCATGCCCAGCT...
Task1_train_13184
A mutation in STXBP1 (syntaxin binding protein 1), located on Chromosome 9, is being studied. Determine whether it’s pathogenic or benign, and specify the linked disease.
Pathogenic; Inborn genetic diseases
GTGGGACCTACTAAAGAGTTGAGGAGGGAAGGTACCATGCTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTAC...
GTGGGACCTACTAAAGAGTTGAGGAGGGAAGGTACCATGCTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTAC...
Task1_train_13185
This alteration occurs within gene STXBP1 (syntaxin binding protein 1) located on Chromosome 9. Is it associated with a disease or is it a benign variant?
Pathogenic; Developmental and epileptic encephalopathy, 4
AGGTACCATGCTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTACGTGGAGATAACCTCAGCTTGTCATGTGCT...
AGGTACCATGCTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTACGTGGAGATAACCTCAGCTTGTCATGTGCT...
Task1_train_13186
Consider a variant on Chromosome 9 in gene STXBP1 (syntaxin binding protein 1). Determine its clinical classification and disease relevance.
Pathogenic; Early infantile epileptic encephalopathy with suppression bursts
AGGTACCATGCTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTACGTGGAGATAACCTCAGCTTGTCATGTGCT...
AGGTACCATGCTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTACGTGGAGATAACCTCAGCTTGTCATGTGCT...
Task1_train_13187
Here is a variant affecting STXBP1 (syntaxin binding protein 1) on Chromosome 9. Please identify whether it is a benign mutation or associated with a disorder.
Pathogenic; Neurodevelopmental delay
AGGTACCATGCTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTACGTGGAGATAACCTCAGCTTGTCATGTGCT...
AGGTACCATGCTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTACGTGGAGATAACCTCAGCTTGTCATGTGCT...
Task1_train_13188
Consider a variant on Chromosome 9 in gene STXBP1 (syntaxin binding protein 1). Determine its clinical classification and disease relevance.
Pathogenic; Early infantile epileptic encephalopathy with suppression bursts
CTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTACGTGGAGATAACCTCAGCTTGTCATGTGCTGAGAGAGCAG...
CTCTGAATTGCCAAATGACAGGTTAGAAGTGGATGTTTACTGAATGGAAATAGTATTCCATAGGGCCTGCCCCCTGCCCTCATCTTACTCTCCAGTTGTTTCTGACTTTGCTTCAGCCTTGTGCCTTTCTTTGTGTGCATTTCATCCTTGCTCTCAGTGTTCACTCCTGTCGGCCGACTCCTTGAATAACCACTAAGTAGCCAATCAGAAACGAGCTTGGAAGGAGAGCGAGGGTGGGGAGCAGAAGCATCCCATCTGCTGCGAAGGAGACTGTTTTTTACGTGGAGATAACCTCAGCTTGTCATGTGCTGAGAGAGCAG...
Task1_train_13189
A sequence alteration has been identified in STXBP1 (syntaxin binding protein 1) on Chromosome 9. Is it disease-inducing or harmless?
Pathogenic; Early infantile epileptic encephalopathy with suppression bursts
ATGACAGGTTTGGGATTATGTCCTTCGGTGGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGA...
ATGACAGGTTTGGGATTATGTCCTTCGGTGGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGA...
Task1_train_13190
Mutation context: Chromosome 9, Gene STXBP1 (syntaxin binding protein 1). Determine if this variant is likely to be benign or pathogenic. Mention the disease if applicable.
Pathogenic; Developmental and epileptic encephalopathy, 4
ATGACAGGTTTGGGATTATGTCCTTCGGTGGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGA...
ATGACAGGTTTGGGATTATGTCCTTCGGTGGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGA...
Task1_train_13191
The gene STXBP1 (syntaxin binding protein 1), on Chromosome 9, contains a mutation. Does this mutation cause a disorder, or is it a benign change?
Pathogenic; Developmental and epileptic encephalopathy, 4
GGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGAGCTTGGTGGTGCCACGGATCATGGGTTCA...
GGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGAGCTTGGTGGTGCCACGGATCATGGGTTCA...
Task1_train_13192
The gene STXBP1 (syntaxin binding protein 1) on Chromosome 9 carries this variant. Does this mutation lead to a specific disease, or is it non-pathogenic?
Pathogenic; Severe global developmental delay
GGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGAGCTTGGTGGTGCCACGGATCATGGGTTCA...
GGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGAGCTTGGTGGTGCCACGGATCATGGGTTCA...
Task1_train_13193
A variant affecting Chromosome 9, within the gene STXBP1 (syntaxin binding protein 1), has been observed. Determine if it's benign or associated with disease.
Pathogenic; Microcephaly
GGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGAGCTTGGTGGTGCCACGGATCATGGGTTCA...
GGTTATCACTGGAAACCTATGGGGGATTTGGACGGGGATGACCACAGTTCTCTGGGAGAGTGAAGGCTGGAGTATAAGCAGGAGTCAGGGCAAGGAAAAACCAGAAGGGGTGGCTAACCAGGAGGCCACTGCAGGAGGAACAAAGGGCCTGGTCTTGGAGTGATGGGAACGGGGTGGACAGGTAAGGACAGAATCTGAGAGCGTGCAGAGGTGGATTCGGAACTGCCAGCAGGTTAGTAGTAGGGCAGGAAGGGCTTAGGCTGCCAAGGCATTGTGCCGTGGTAACCAAGAGCTTGGTGGTGCCACGGATCATGGGTTCA...
Task1_train_13194
This variant affects the gene STXBP1 (syntaxin binding protein 1) found on Chromosome 9. What is the clinical effect of this variant — benign or pathogenic? State the disease if applicable.
Pathogenic; Developmental and epileptic encephalopathy, 4
CTCCTTTACAAGAGGGGTTCGCTAGGTGGAGAAGCCGGAGTTGGCTGGGTGGCTTGTGAAGCATCTCCCTGTTTTCCCCCAGGGCCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTGCTGCCTATCGAAAATGATGTATACAAGTAAGTATAGTGTTACAGACCCCAGAGTGTATACGGCTCTGCACATGAGCCAAAAATATGTCTAGAAAAAGAACGGGTTTTTTTGTTTGTTTGTTTTGAGATGGAGT...
CTCCTTTACAAGAGGGGTTCGCTAGGTGGAGAAGCCGGAGTTGGCTGGGTGGCTTGTGAAGCATCTCCCTGTTTTCCCCCAGGGCCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTGCTGCCTATCGAAAATGATGTATACAAGTAAGTATAGTGTTACAGACCCCAGAGTGTATACGGCTCTGCACATGAGCCAAAAATATGTCTAGAAAAAGAACGGGTTTTTTTGTTTGTTTGTTTTGAGATGGAGT...
Task1_train_13195
A mutation on Chromosome 9 affecting STXBP1 (syntaxin binding protein 1) has been found. Is it harmful or harmless? What disease, if any, does it cause?
Pathogenic; Early infantile epileptic encephalopathy with suppression bursts
CTCCTTTACAAGAGGGGTTCGCTAGGTGGAGAAGCCGGAGTTGGCTGGGTGGCTTGTGAAGCATCTCCCTGTTTTCCCCCAGGGCCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTGCTGCCTATCGAAAATGATGTATACAAGTAAGTATAGTGTTACAGACCCCAGAGTGTATACGGCTCTGCACATGAGCCAAAAATATGTCTAGAAAAAGAACGGGTTTTTTTGTTTGTTTGTTTTGAGATGGAGT...
CTCCTTTACAAGAGGGGTTCGCTAGGTGGAGAAGCCGGAGTTGGCTGGGTGGCTTGTGAAGCATCTCCCTGTTTTCCCCCAGGGCCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTGCTGCCTATCGAAAATGATGTATACAAGTAAGTATAGTGTTACAGACCCCAGAGTGTATACGGCTCTGCACATGAGCCAAAAATATGTCTAGAAAAAGAACGGGTTTTTTTGTTTGTTTGTTTTGAGATGGAGT...
Task1_train_13196
This variant affects the gene STXBP1 (syntaxin binding protein 1) found on Chromosome 9. What is the clinical effect of this variant — benign or pathogenic? State the disease if applicable.
Pathogenic; Infantile epilepsy syndrome
GAGAAGCCGGAGTTGGCTGGGTGGCTTGTGAAGCATCTCCCTGTTTTCCCCCAGGGCCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTGCTGCCTATCGAAAATGATGTATACAAGTAAGTATAGTGTTACAGACCCCAGAGTGTATACGGCTCTGCACATGAGCCAAAAATATGTCTAGAAAAAGAACGGGTTTTTTTGTTTGTTTGTTTTGAGATGGAGTCTCGCTCTGTCACCCAAGCGGGAGTGCA...
GAGAAGCCGGAGTTGGCTGGGTGGCTTGTGAAGCATCTCCCTGTTTTCCCCCAGGGCCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTGCTGCCTATCGAAAATGATGTATACAAGTAAGTATAGTGTTACAGACCCCAGAGTGTATACGGCTCTGCACATGAGCCAAAAATATGTCTAGAAAAAGAACGGGTTTTTTTGTTTGTTTGTTTTGAGATGGAGTCTCGCTCTGTCACCCAAGCGGGAGTGCA...
Task1_train_13197
Consider this mutation in STXBP1 (syntaxin binding protein 1) on Chromosome 9. Is this a benign change or a disease-causing variant?
Pathogenic; Inborn genetic diseases
GAGAAGCCGGAGTTGGCTGGGTGGCTTGTGAAGCATCTCCCTGTTTTCCCCCAGGGCCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTGCTGCCTATCGAAAATGATGTATACAAGTAAGTATAGTGTTACAGACCCCAGAGTGTATACGGCTCTGCACATGAGCCAAAAATATGTCTAGAAAAAGAACGGGTTTTTTTGTTTGTTTGTTTTGAGATGGAGTCTCGCTCTGTCACCCAAGCGGGAGTGCA...
GAGAAGCCGGAGTTGGCTGGGTGGCTTGTGAAGCATCTCCCTGTTTTCCCCCAGGGCCCAGACAAGGCACGCTCCCAGCTCCTGATCCTGGATCGAGGCTTTGACCCCAGCTCCCCTGTGCTCCATGAATTGACTTTTCAGGCTATGAGTTATGATCTGCTGCCTATCGAAAATGATGTATACAAGTAAGTATAGTGTTACAGACCCCAGAGTGTATACGGCTCTGCACATGAGCCAAAAATATGTCTAGAAAAAGAACGGGTTTTTTTGTTTGTTTGTTTTGAGATGGAGTCTCGCTCTGTCACCCAAGCGGGAGTGCA...
Task1_train_13198
This mutation occurs in STXBP1 (syntaxin binding protein 1) on Chromosome 9. Does this change lead to a known medical condition, or is it benign?
Pathogenic; Developmental and epileptic encephalopathy, 4
CAGATCATCAGCCCCACAGGCCTCTCTCTGGTCTCATCTCTGCCCCTATCCTTGTTGCCCTGCCTCCTTGCTCCAGCCACACCAGTGTCCTCTTGCCTCAGACCTGGCCAGGTTCTTTGGCTCAGGCATCATTTCCTCAGGGAAACCCTCCCCGGGTCCCTACCCAGACTAGGCAGATGCCTGTGCCACGTGCACCCACACTACCTGGTGAGTCCCCTCGAAGGGCCCTGATCTCTGCAGTGCTTTGGCTCCTCTCCTGGATGCTCTGATTCTCCGTGAATTAGAGATTCTTTTTTTTTTTTCTTTTGTCCTTGTATCTC...
CAGATCATCAGCCCCACAGGCCTCTCTCTGGTCTCATCTCTGCCCCTATCCTTGTTGCCCTGCCTCCTTGCTCCAGCCACACCAGTGTCCTCTTGCCTCAGACCTGGCCAGGTTCTTTGGCTCAGGCATCATTTCCTCAGGGAAACCCTCCCCGGGTCCCTACCCAGACTAGGCAGATGCCTGTGCCACGTGCACCCACACTACCTGGTGAGTCCCCTCGAAGGGCCCTGATCTCTGCAGTGCTTTGGCTCCTCTCCTGGATGCTCTGATTCTCCGTGAATTAGAGATTCTTTTTTTTTTTTCTTTTGTCCTTGTATCTC...
Task1_train_13199
The variant affects gene STXBP1 (syntaxin binding protein 1), which is on Chromosome 9. Please evaluate whether this mutation is benign or pathogenic and specify the disease if necessary.
Pathogenic; Inborn genetic diseases
GTTTCAACATTATAAAACCATGGTTCAAATTCTAAGCGAAGAGAAGATGTTAAAAGATTCTGAAGCCGGCTGGGCGTGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCGAGACGGGCGGATCATGAAGTCAGGAGTTCAAGACCAGCTTGGGCAACACAGTGAAACCCCATCTCTACTAAAAATACAAAAATTAATTGGGCGTGGTAGCTGGCGCCTGTAATCCCAGCTACTTGGGGGGCTGAGGCAGGAGAATCGCTCGAACTCGGGAGGCGGAGGTTGCAGTGAACAGAGATTGCTCCACTGCACTCCAGC...
GTTTCAACATTATAAAACCATGGTTCAAATTCTAAGCGAAGAGAAGATGTTAAAAGATTCTGAAGCCGGCTGGGCGTGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCGAGACGGGCGGATCATGAAGTCAGGAGTTCAAGACCAGCTTGGGCAACACAGTGAAACCCCATCTCTACTAAAAATACAAAAATTAATTGGGCGTGGTAGCTGGCGCCTGTAATCCCAGCTACTTGGGGGGCTGAGGCAGGAGAATCGCTCGAACTCGGGAGGCGGAGGTTGCAGTGAACAGAGATTGCTCCACTGCACTCCAGC...