semeru/text-code-CodeSummarization · Datasets at Hugging Face

input stringlengths 10 828	output stringlengths 5 107
public void start service is inited true if log is debug2 log debug2 get class name start service	called to start each service in turn after all services have been
public metadata exception get exception return ex	return the exception thrown by the validator
public void stop service shutting down true checkpoint here unregister config logically we should set the app null here but that breaks several tests which sometimes stop managers twice the app null	called to stop a service
public lockss app get app return the app	return the app instance in which this manager is running
protected boolean is app inited return the app is app inited	return true iff all the app services have been initialized
protected boolean is inited return is inited	return true iff this managers init has completed
public void set failed deserialization mode int mode switch mode case failed deserialization ignore case failed deserialization rename case failed deserialization copy this failed deserialization mode mode break default string error string attempt to set failed deserialization mode to mode logger error error string throw new illegal argument exception error string	p sets the failed deserialization mode for this instance
protected void reset config if this instanceof configurable manager configurable manager cmgr configurable manager this configuration cur current config get current config cmgr set config cur config manager empty configuration cur differences null all differences else throw new runtime exception not a configurable manager	convenience method to re invoke the managers set config new old
public boolean is app inited return app inited	true iff all managers have been inited
public void set failed serialization mode boolean save temp files failed serialization mode save temp files	p sets the failed serialization mode for this instance
public boolean is app running return app running	true if all managers have been started
public date get start date if start date null this happens during testing start date time base now date return start date	return the time the app started running
public string get version info string v app build info get build info string platform version plat configuration get platform version if plat null v app v app plat display string return v app	return a string describing the version of the app and platform
private boolean refill int min size throws ioexception if ring size min size return true while reader eof reader eof ring refill buffer reader if is trace logger debug3 refilled ring to string if ring size min size return true return false	ensure sufficient chars in ring for shortest tag were interested in
public lockss manager get manager by key string manager key lockss manager mgr lockss manager manager map get manager key if mgr null throw new illegal argument exception unavailable manager manager key return mgr	return a lockss manager
public config manager get config manager return config manager get config manager	return the config manager instance
public void set serialization read back mode boolean serialization read back serialization read back mode serialization read back	p sets the serialization read back mode for this instance
public watchdog service get watchdog service return watchdog service get manager watchdog service	return the watchdog service instance
public mail service get mail service return mail service get manager mail service	return the mail manager instance
public boolean is daemon inited return is app inited	true iff all managers have been inited
public sched service get sched service return sched service get manager sched service	return the sched service instance
public resource manager get resource manager return resource manager get manager resource manager	return the resource manager instance
public servlet manager get servlet manager return servlet manager get manager servlet manager	return the servlet manager instance
public boolean is daemon running return is app running	true if all managers have been started
protected lockss manager init manager manager desc desc throws exception string manager name get manager class name desc lockss manager mgr instantiate manager desc try call init on the service mgr init service this return mgr catch exception ex log error unable to instantiate lockss manager manager name ex throw ex	load and init the specified manager
public string get testing mode return testing mode	return the current testing mode
public boolean is clockss return is clockss	true if running as a clockss daemon
public void stop app stop	stop the app
protected void stop app running false stop all single managers list rkeys list util reverse copy manager map as list for iterator it rkeys iterator it has next string key string it next lockss manager lm lockss manager manager map get key try lm stop service manager map remove key catch exception e log warning couldn t stop service lm e	stop the app by stopping the managers in the reverse order of
public boolean is detect clockss subscription return is clockss get clockss params is detect subscription	convenience method returns
protected void start app throws exception start date time base now date log info get version info starting initialize our properties from the urls given init properties repeat the version info as we may now be logging to a different target and to include the platform version which wasn t availabe before the config was loaded log info get version info starting managers startup all services init managers log info started	run the app
protected void init properties config manager config mgr config manager make config manager prop urls group names config mgr init service this config mgr start service log info waiting for config if config mgr wait config log critical initial config load timed out system exit constants exit code resource unavailable log info config loaded prev exit once current config get boolean param param app exit once default app exit once config mgr register configuration callback new configuration callback public void configuration changed configuration new config configuration prev config configuration differences changed keys set config new config prev config changed keys	init our configuration and extract any parameters we will use locally
public void stop daemon stop app	stop the daemon
protected lockss app get lockss context return lockss context	p retrieves the serialization context
public alert manager get alert manager return alert manager get manager alert manager	return the alert manager instance
public lockss daemon get daemon return lockss daemon the app	return the daemon instance in which this manager is running
protected boolean is daemon inited return is app inited	return true iff all the daemon services have been initialized
public hash service get hash service return hash service get manager hash service	return the hash service instance
public void set max size long bytes int files this max size bytes this max files files	set the target maximum amount of disk space to use in bytes
public poll manager get poll manager return poll manager get manager poll manager	return the poll manager instance
public void clear synchronized cmap try tfile umount catch fs sync exception e log warning couldn t umount tfile e for entry ent cmap values if ent ctf null try delete file ent catch exception e log warning error deleting ent ctf cmap clear	clears the cache
public psm manager get psm manager return psm manager get manager psm manager	return the psm manager instance
protected string get attribute value string attribute string buffer sb return get attribute value attribute sb to string	return attribute value with any html entities decoded
protected string get attribute value string attribute string src string val get encoded attribute value attribute src return val null null translate decode val	return attribute value with any html entities decoded
public lcap datagram comm get datagram comm manager return lcap datagram comm get manager datagram comm manager	return the datagram communication manager instance
public lcap stream comm get stream comm manager return lcap stream comm get manager stream comm manager	return the stream communication manager instance
public lcap datagram router get datagram router manager return lcap datagram router get manager datagram router manager	return the datagram router manager instance
public lcap router get router manager return lcap router get manager router manager	return the communication router manager instance
public static interface permission helper public archival unit get au generate a url cacher for the given url suitable for fetching and possibly storing a permission page see link base crawler param store permission scheme param url return url cacher for the given url public url cacher make permission url cacher string url public buffered input stream reset input stream buffered input stream is string url throws ioexception public void store permission page url cacher uc buffered input stream is throws ioexception public void set previous content type string previous content type public crawler status get crawler status	encapsulation for the methods that the permission map needs from a
public proxy manager get proxy manager return proxy manager get manager proxy manager	return the proxy handler instance
public crawl manager get crawl manager return crawl manager get manager crawl manager	return the crawl manager instance
public repository manager get repository manager return repository manager get manager repository manager	return the repository manager instance
public system metrics get system metrics return system metrics get manager system metrics	return the system metrics instance
protected void throw if null object obj if obj null logger debug attempting to serialize null throw new null pointer exception	p throws a
public plugin manager get plugin manager return plugin manager get manager plugin manager	return the plugin manager instance
static private lockss daemon get daemon return lockss daemon get lockss daemon	get the curren lockss daemon
public metadata manager get metadata manager return metadata manager get manager metadata manager	return the metadata manager instance
static public publication date parse string pub date str return new publication date pub date str	static for parsing a publication date string for the
static public publication date parse string pub date str locale locale return new publication date pub date str locale	static for parsing a publication date string for the
public string to string string s integer to string year if quarter 0 s q quarter else if season 0 s s season else if month 0 s string format 02d month if day 0 s string format 02d day return s	return string representation of the publication date in extended
public icp manager get icp manager return icp manager get manager icp manager	p retrieves the icp manager
public remote api get remote api return remote api get manager remote api	return the remote api instance
public int get day of month return day	get the 1 based day of month for this date
public node manager manager get node manager manager return node manager manager get manager node manager manager	return the node manager manager instance
public double get health throws health unavailable exception if out of range value seen throw new health value exception health evaluation script disabled because it previously returned out of range value long s system current time millis double res eval log debug string format preserved au s health metric eval took sms au get name system current time millis s if res 0 0 res 1 0 return res else out of range value seen true throw new health value exception script returned out of range value res	get the health of an archival unit
public double get poll agreement return aus get v3 agreement	return the aus most recent poll agreement
public double get highest poll agreement return aus get highest v3 agreement	return the aus highest poll agreement
public archival unit status get archival unit status return archival unit status get manager archival unit status	return the archival unit status instance
public long get days since last poll long last poll aus get last top level poll time return last poll 0 1 time base ms since last poll constants day	return the number of days since the aus last completed poll
public int get number of repairers identity manager id mgr au util get daemon au get identity manager collection repairers id mgr get caches to repair from au if repairers null return 0 return repairers size	return the estimated number of peers willing to repair this au
public true zip manager get true zip manager return true zip manager get manager truezip manager	return true zip manager instance
public boolean has crawled return aus has crawled	return true if the au has at least one successful crawl
public boolean is available from publisher return au util is pub down au	return true if the au is still available from its original site
public clockss params get clockss params return clockss params get manager clockss params	return the clockss params instance
public mime type info get mime type info string content type string mime header util get mime type from content type content type mime type info res mime type info map get mime if res null parent null return parent get mime type info mime return res	return immutable view of mime type info for the specified content type
public lockss au manager get au manager string key archival unit au lockss au manager mgr null linked map au mgr map linked map au manager maps get au if au mgr map null mgr lockss au manager au mgr map get key if mgr null log error key not found for au au throw new illegal argument exception unavailable au manager key return mgr	return an au specific lockss manager
public lockss repository get lockss repository archival unit au return lockss repository get au manager lockss repository au	get lockss repository instance
public document get table document throws xml dom builder xml dom exception if table document null table document create document return table document	returns the document form of the status table
public node manager get node manager archival unit au return node manager get au manager node manager au	return the node manager instance
public history repository get history repository archival unit au return history repository get au manager history repository au	return the history repository instance
protected string get db root directory configuration config config manager get current config string root dir config get config manager param tmpdir suppress warnings unchecked list string d space list config get list config manager param platform disk space list if d space list null d space list is empty root dir d space list get 0 return root dir	get the root directory for creating the database files
public interface debug only extends status accessor	marker interface for status accessors that should be included in the
public activity regulator get activity regulator archival unit au return activity regulator get au manager activity regulator au	return activity regulator instance
public void stop au managers archival unit au linked map au mgr map linked map au manager maps get au if au mgr map null suppress warnings unchecked list string rkeys list util reverse copy au mgr map as list for string key rkeys lockss au manager mgr lockss au manager au mgr map get key try mgr stop service catch exception e log warning couldn t stop au manager mgr e continue to try to stop other managers au manager maps remove au	stop the managers for the au in the reverse order in which they
public string get title footnote return title footnote	get the title footnote for this table
public void set title footnote string footnote this title footnote footnote	set the title footnote for this table
public connection new connection throws sqlexception if data source null throw new sqlexception no datasource connection conn data source get connection conn set auto commit false return conn	create a new database connection using the datasource
public void set options bit set options this options options	sets the options for this table
public bit set get options return options	returns the options for this table
public list get summary info return summary info	returns a list of
public class no such table exception extends exception public no such table exception string msg super msg public no such table exception string msg exception cause super msg cause	thrown for various errors related to status queries
public void set summary info list summary info this summary info summary info	sets a list of
public list get column descriptors return column descriptors	gets a list of
public void stop all au managers archival unit au while au archival unit collection util get an element au manager maps key set null log debug2 stopping all managers for au stop au managers au au manager maps clear	calls stop service on all au managers for all aus
public map get column descriptor map if column descriptor map null column descriptor map new hash map for iterator iter column descriptors iterator iter has next column descriptor col column descriptor iter next column descriptor map put col get column name col return column descriptor map	returns a map that maps column name to column descriptor
private int start reindexing connection conn null int count 0 try conn new connection count start reindexing conn catch sqlexception ex log debug cannot connect to database indexing not started ex finally safe close conn return count	ensure as many reindexing tasks as possible are running if manager is
public void set column descriptors list column descriptors set column descriptors column descriptors null	sets a list of
public oai request data get oai request data return oai request data	gets the oai request data object and return it
public oai handler get oai handler return oai handler	getter for the optional custom oai handler
public void set oai handler oai handler oai handler this oai handler oai handler	setter for the optional custom oai handler

public void start service is inited true if log is debug2 log debug2 get class name start service

called to start each service in turn after all services have been

public metadata exception get exception return ex

return the exception thrown by the validator

public void stop service shutting down true checkpoint here unregister config logically we should set the app null here but that breaks several tests which sometimes stop managers twice the app null

called to stop a service

public lockss app get app return the app

return the app instance in which this manager is running

protected boolean is app inited return the app is app inited

return true iff all the app services have been initialized

protected boolean is inited return is inited

return true iff this managers init has completed

public void set failed deserialization mode int mode switch mode case failed deserialization ignore case failed deserialization rename case failed deserialization copy this failed deserialization mode mode break default string error string attempt to set failed deserialization mode to mode logger error error string throw new illegal argument exception error string

p sets the failed deserialization mode for this instance

protected void reset config if this instanceof configurable manager configurable manager cmgr configurable manager this configuration cur current config get current config cmgr set config cur config manager empty configuration cur differences null all differences else throw new runtime exception not a configurable manager

convenience method to re invoke the managers set config new old

public boolean is app inited return app inited

true iff all managers have been inited

public void set failed serialization mode boolean save temp files failed serialization mode save temp files

p sets the failed serialization mode for this instance

public boolean is app running return app running

true if all managers have been started

public date get start date if start date null this happens during testing start date time base now date return start date

return the time the app started running

public string get version info string v app build info get build info string platform version plat configuration get platform version if plat null v app v app plat display string return v app

return a string describing the version of the app and platform

private boolean refill int min size throws ioexception if ring size min size return true while reader eof reader eof ring refill buffer reader if is trace logger debug3 refilled ring to string if ring size min size return true return false

ensure sufficient chars in ring for shortest tag were interested in

public lockss manager get manager by key string manager key lockss manager mgr lockss manager manager map get manager key if mgr null throw new illegal argument exception unavailable manager manager key return mgr

return a lockss manager

public config manager get config manager return config manager get config manager

return the config manager instance

public void set serialization read back mode boolean serialization read back serialization read back mode serialization read back

p sets the serialization read back mode for this instance

public watchdog service get watchdog service return watchdog service get manager watchdog service

return the watchdog service instance

public mail service get mail service return mail service get manager mail service

return the mail manager instance

public boolean is daemon inited return is app inited

true iff all managers have been inited

public sched service get sched service return sched service get manager sched service

return the sched service instance

public resource manager get resource manager return resource manager get manager resource manager

return the resource manager instance

public servlet manager get servlet manager return servlet manager get manager servlet manager

return the servlet manager instance

public boolean is daemon running return is app running

true if all managers have been started

protected lockss manager init manager manager desc desc throws exception string manager name get manager class name desc lockss manager mgr instantiate manager desc try call init on the service mgr init service this return mgr catch exception ex log error unable to instantiate lockss manager manager name ex throw ex

load and init the specified manager

public string get testing mode return testing mode

return the current testing mode

public boolean is clockss return is clockss

true if running as a clockss daemon

public void stop app stop

stop the app

protected void stop app running false stop all single managers list rkeys list util reverse copy manager map as list for iterator it rkeys iterator it has next string key string it next lockss manager lm lockss manager manager map get key try lm stop service manager map remove key catch exception e log warning couldn t stop service lm e

stop the app by stopping the managers in the reverse order of

public boolean is detect clockss subscription return is clockss get clockss params is detect subscription

convenience method returns

protected void start app throws exception start date time base now date log info get version info starting initialize our properties from the urls given init properties repeat the version info as we may now be logging to a different target and to include the platform version which wasn t availabe before the config was loaded log info get version info starting managers startup all services init managers log info started

run the app

protected void init properties config manager config mgr config manager make config manager prop urls group names config mgr init service this config mgr start service log info waiting for config if config mgr wait config log critical initial config load timed out system exit constants exit code resource unavailable log info config loaded prev exit once current config get boolean param param app exit once default app exit once config mgr register configuration callback new configuration callback public void configuration changed configuration new config configuration prev config configuration differences changed keys set config new config prev config changed keys

init our configuration and extract any parameters we will use locally

public void stop daemon stop app

stop the daemon

protected lockss app get lockss context return lockss context

p retrieves the serialization context

public alert manager get alert manager return alert manager get manager alert manager

return the alert manager instance

public lockss daemon get daemon return lockss daemon the app

return the daemon instance in which this manager is running

protected boolean is daemon inited return is app inited

return true iff all the daemon services have been initialized

public hash service get hash service return hash service get manager hash service

return the hash service instance

public void set max size long bytes int files this max size bytes this max files files

set the target maximum amount of disk space to use in bytes

public poll manager get poll manager return poll manager get manager poll manager

return the poll manager instance

public void clear synchronized cmap try tfile umount catch fs sync exception e log warning couldn t umount tfile e for entry ent cmap values if ent ctf null try delete file ent catch exception e log warning error deleting ent ctf cmap clear

clears the cache

public psm manager get psm manager return psm manager get manager psm manager

return the psm manager instance

protected string get attribute value string attribute string buffer sb return get attribute value attribute sb to string

return attribute value with any html entities decoded

protected string get attribute value string attribute string src string val get encoded attribute value attribute src return val null null translate decode val

return attribute value with any html entities decoded

public lcap datagram comm get datagram comm manager return lcap datagram comm get manager datagram comm manager

return the datagram communication manager instance

public lcap stream comm get stream comm manager return lcap stream comm get manager stream comm manager

return the stream communication manager instance

public lcap datagram router get datagram router manager return lcap datagram router get manager datagram router manager

return the datagram router manager instance

public lcap router get router manager return lcap router get manager router manager

return the communication router manager instance

public static interface permission helper public archival unit get au generate a url cacher for the given url suitable for fetching and possibly storing a permission page see link base crawler param store permission scheme param url return url cacher for the given url public url cacher make permission url cacher string url public buffered input stream reset input stream buffered input stream is string url throws ioexception public void store permission page url cacher uc buffered input stream is throws ioexception public void set previous content type string previous content type public crawler status get crawler status

encapsulation for the methods that the permission map needs from a

public proxy manager get proxy manager return proxy manager get manager proxy manager

return the proxy handler instance

public crawl manager get crawl manager return crawl manager get manager crawl manager

return the crawl manager instance

public repository manager get repository manager return repository manager get manager repository manager

return the repository manager instance

public system metrics get system metrics return system metrics get manager system metrics

return the system metrics instance

protected void throw if null object obj if obj null logger debug attempting to serialize null throw new null pointer exception

p throws a

public plugin manager get plugin manager return plugin manager get manager plugin manager

return the plugin manager instance

static private lockss daemon get daemon return lockss daemon get lockss daemon

get the curren lockss daemon

public metadata manager get metadata manager return metadata manager get manager metadata manager

return the metadata manager instance

static public publication date parse string pub date str return new publication date pub date str

static for parsing a publication date string for the

static public publication date parse string pub date str locale locale return new publication date pub date str locale

static for parsing a publication date string for the

public string to string string s integer to string year if quarter 0 s q quarter else if season 0 s s season else if month 0 s string format 02d month if day 0 s string format 02d day return s

return string representation of the publication date in extended

public icp manager get icp manager return icp manager get manager icp manager

p retrieves the icp manager

public remote api get remote api return remote api get manager remote api

return the remote api instance

public int get day of month return day

get the 1 based day of month for this date

public node manager manager get node manager manager return node manager manager get manager node manager manager

return the node manager manager instance

public double get health throws health unavailable exception if out of range value seen throw new health value exception health evaluation script disabled because it previously returned out of range value long s system current time millis double res eval log debug string format preserved au s health metric eval took sms au get name system current time millis s if res 0 0 res 1 0 return res else out of range value seen true throw new health value exception script returned out of range value res

get the health of an archival unit

public double get poll agreement return aus get v3 agreement

return the aus most recent poll agreement

public double get highest poll agreement return aus get highest v3 agreement

return the aus highest poll agreement

public archival unit status get archival unit status return archival unit status get manager archival unit status

return the archival unit status instance

public long get days since last poll long last poll aus get last top level poll time return last poll 0 1 time base ms since last poll constants day

return the number of days since the aus last completed poll

public int get number of repairers identity manager id mgr au util get daemon au get identity manager collection repairers id mgr get caches to repair from au if repairers null return 0 return repairers size

return the estimated number of peers willing to repair this au

public true zip manager get true zip manager return true zip manager get manager truezip manager

return true zip manager instance

public boolean has crawled return aus has crawled

return true if the au has at least one successful crawl

public boolean is available from publisher return au util is pub down au

return true if the au is still available from its original site

public clockss params get clockss params return clockss params get manager clockss params

return the clockss params instance

public mime type info get mime type info string content type string mime header util get mime type from content type content type mime type info res mime type info map get mime if res null parent null return parent get mime type info mime return res

return immutable view of mime type info for the specified content type

public lockss au manager get au manager string key archival unit au lockss au manager mgr null linked map au mgr map linked map au manager maps get au if au mgr map null mgr lockss au manager au mgr map get key if mgr null log error key not found for au au throw new illegal argument exception unavailable au manager key return mgr

return an au specific lockss manager

public lockss repository get lockss repository archival unit au return lockss repository get au manager lockss repository au

get lockss repository instance

public document get table document throws xml dom builder xml dom exception if table document null table document create document return table document

returns the document form of the status table

public node manager get node manager archival unit au return node manager get au manager node manager au

return the node manager instance

public history repository get history repository archival unit au return history repository get au manager history repository au

return the history repository instance

protected string get db root directory configuration config config manager get current config string root dir config get config manager param tmpdir suppress warnings unchecked list string d space list config get list config manager param platform disk space list if d space list null d space list is empty root dir d space list get 0 return root dir

get the root directory for creating the database files

public interface debug only extends status accessor

marker interface for status accessors that should be included in the

public activity regulator get activity regulator archival unit au return activity regulator get au manager activity regulator au

return activity regulator instance

public void stop au managers archival unit au linked map au mgr map linked map au manager maps get au if au mgr map null suppress warnings unchecked list string rkeys list util reverse copy au mgr map as list for string key rkeys lockss au manager mgr lockss au manager au mgr map get key try mgr stop service catch exception e log warning couldn t stop au manager mgr e continue to try to stop other managers au manager maps remove au

stop the managers for the au in the reverse order in which they

public string get title footnote return title footnote

get the title footnote for this table

public void set title footnote string footnote this title footnote footnote

set the title footnote for this table

public connection new connection throws sqlexception if data source null throw new sqlexception no datasource connection conn data source get connection conn set auto commit false return conn

create a new database connection using the datasource

public void set options bit set options this options options

sets the options for this table

public bit set get options return options

returns the options for this table

public list get summary info return summary info

returns a list of

public class no such table exception extends exception public no such table exception string msg super msg public no such table exception string msg exception cause super msg cause

thrown for various errors related to status queries

public void set summary info list summary info this summary info summary info

sets a list of

public list get column descriptors return column descriptors

gets a list of

public void stop all au managers archival unit au while au archival unit collection util get an element au manager maps key set null log debug2 stopping all managers for au stop au managers au au manager maps clear

calls stop service on all au managers for all aus

public map get column descriptor map if column descriptor map null column descriptor map new hash map for iterator iter column descriptors iterator iter has next column descriptor col column descriptor iter next column descriptor map put col get column name col return column descriptor map

returns a map that maps column name to column descriptor

private int start reindexing connection conn null int count 0 try conn new connection count start reindexing conn catch sqlexception ex log debug cannot connect to database indexing not started ex finally safe close conn return count

ensure as many reindexing tasks as possible are running if manager is

public void set column descriptors list column descriptors set column descriptors column descriptors null

sets a list of

public oai request data get oai request data return oai request data

gets the oai request data object and return it

public oai handler get oai handler return oai handler

getter for the optional custom oai handler

public void set oai handler oai handler oai handler this oai handler oai handler

setter for the optional custom oai handler