| | --- |
| | license: mit |
| | --- |
| | |
| | # Quantum Electronic Integrals |
| |
|
| | This dataset contains quantum interaction integrals between randomly sampled pairs/quadruples of Gaussian-Type Orbitals (GTOs). |
| | The targets were computed in julia using [GaussianBasis.jl](https://github.com/FermiQC/GaussianBasis.jl). |
| |
|
| | ## Loading data from python |
| |
|
| | See [qml/data/integrals.py](https://github.com/aklipf/qml). |
| | Loading a mono-electronic integral dataset should be as simple as: |
| |
|
| | ```py |
| | from qml.data import MonoIntegral |
| | |
| | I_2_1 = MonoIntegral.h5read("integrals/mono_20k/mono_2_1.h5") |
| | ``` |
| |
|
| | The `MonoIntegral` class inherits its `h5read` method from the `TensorDict` mixin. |
| |
|
| | Each dataset contains its corresponding `TensorDict` dataclass, reading data from any |
| | compatible HDF5 storage (containing enough keys). |
| |
|
| | # Mono-Electronic Integrals |
| |
|
| | See [mono_20k](https://huggingface.co/datasets/qml/integrals/tree/main/mono_20k) |
| | and [mono_100k](https://huggingface.co/datasets/qml/integrals/tree/main/mono_100k) |
| | for 2-electron integrals. |
| |
|
| | Each HDF5 file encodes an object of type: |
| |
|
| | ```julia |
| | # jqml/Data.jl |
| | """ Object storing 1-electron integrals. """ |
| | struct MonoIntegral{T} <: ArrayFields |
| | l :: Vector{Int64} |
| | exp :: Union{SArray, Array{T}} |
| | xyz :: Union{SArray, Array{T}} |
| | overlap :: Array{T} |
| | kinetic :: Array{T} |
| | nuclear :: Array{T} |
| | Z :: Array{Int64} |
| | end |
| | ``` |
| |
|
| | Input wave functions (ψ1, ψ2) are primitive, spherical GTO-shells |
| | with unit coefficients, i.e. |
| |
|
| | ψ(C + r) = rˡ ⋅ Yₗₘ(r/|r|) ⋅ exp(-α |r|²) |
| | |
| | where C is `ψ.center`, α is `ψ.exp`, and the magnetic quantum number m |
| | takes all possible values in {-l, ..., l} within each subshell. |
| |
|
| | ### Inputs: |
| | - `xyz` : center of ψ2 (ψ1 is centered at 0) |
| | - `l` : pair of angular momenta (l₁, l₂) |
| | - `exp` : exponents (α₁, α₂) |
| | - `Z` : atomic charges used to compute the nuclear integral. |
| |
|
| | ### Targets: |
| | - `overlap` integrals `S₁₂ = ∫ ψ1 ⋅ ψ2` |
| | - `kinetic` integrals `T₁₂ = 1/2 * ∫ ∇ψ1 ⋅ ∇ψ2` |
| | - `nuclear` attraction integrals |
| |
|
| | `N₁₂ = ∫ ψ1 ⋅ [(Z₁ / |r|) + (Z₂ / |r - xyz|)] ⋅ ψ2` |
| | |
| |
|
| |
|
| | ### Note: |
| | Mono-electronic integrals are square matrices of shape `D × D` with |
| |
|
| | D = (2 * l1 + 1) + (2 * l2 + 1) |
| | |
| | Indices correspond to increasing values of `m1 ∈ {-l1, …, l1}` first, |
| | then increasing values of `m2 ∈ {-l2, …, l2}`. |
| |
|
| | # Bi-Electronic Integrals |
| |
|
| | Batches of 2-electron integrals are returned in the |
| | following sparse format: |
| |
|
| | ```julia |
| | """Object for storing bi-electronic integrals""" |
| | struct BiIntegral4c{T} <: ArrayFields |
| | l :: Vector{Int64} |
| | exp :: Array{T} |
| | xyz :: Array{T} |
| | ijkl :: Array{Int16} |
| | Bijkl :: Array{Float64} |
| | index :: Vector{Int64} |
| | end |
| | ``` |
| |
|
| | The `index` field has the same length as `ijkl` and `Bijkl`, and maps each integral element |
| | to the index of the corresponding input GTOs. |
| |
|
| | See [bi_200](https://huggingface.co/datasets/qml/integrals/tree/main/bi_200) |
| |
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