partition stringclasses 3 values | func_name stringlengths 1 134 | docstring stringlengths 1 46.9k | path stringlengths 4 223 | original_string stringlengths 75 104k | code stringlengths 75 104k | docstring_tokens listlengths 1 1.97k | repo stringlengths 7 55 | language stringclasses 1 value | url stringlengths 87 315 | code_tokens listlengths 19 28.4k | sha stringlengths 40 40 |
|---|---|---|---|---|---|---|---|---|---|---|---|
valid | Client.get_stream | :py:func:`asyncio.coroutine`
Create :py:class:`aioftp.DataConnectionThrottleStreamIO` for straight
read/write io.
:param command_args: arguments for :py:meth:`aioftp.Client.command`
:param conn_type: connection type ("I", "A", "E", "L")
:type conn_type: :py:class:`str`
:param offset: byte offset for stream start position
:type offset: :py:class:`int`
:rtype: :py:class:`aioftp.DataConnectionThrottleStreamIO` | aioftp/client.py | async def get_stream(self, *command_args, conn_type="I", offset=0):
"""
:py:func:`asyncio.coroutine`
Create :py:class:`aioftp.DataConnectionThrottleStreamIO` for straight
read/write io.
:param command_args: arguments for :py:meth:`aioftp.Client.command`
:param conn_type: connection type ("I", "A", "E", "L")
:type conn_type: :py:class:`str`
:param offset: byte offset for stream start position
:type offset: :py:class:`int`
:rtype: :py:class:`aioftp.DataConnectionThrottleStreamIO`
"""
reader, writer = await self.get_passive_connection(conn_type)
if offset:
await self.command("REST " + str(offset), "350")
await self.command(*command_args)
stream = DataConnectionThrottleStreamIO(
self,
reader,
writer,
throttles={"_": self.throttle},
timeout=self.socket_timeout,
)
return stream | async def get_stream(self, *command_args, conn_type="I", offset=0):
"""
:py:func:`asyncio.coroutine`
Create :py:class:`aioftp.DataConnectionThrottleStreamIO` for straight
read/write io.
:param command_args: arguments for :py:meth:`aioftp.Client.command`
:param conn_type: connection type ("I", "A", "E", "L")
:type conn_type: :py:class:`str`
:param offset: byte offset for stream start position
:type offset: :py:class:`int`
:rtype: :py:class:`aioftp.DataConnectionThrottleStreamIO`
"""
reader, writer = await self.get_passive_connection(conn_type)
if offset:
await self.command("REST " + str(offset), "350")
await self.command(*command_args)
stream = DataConnectionThrottleStreamIO(
self,
reader,
writer,
throttles={"_": self.throttle},
timeout=self.socket_timeout,
)
return stream | [
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valid | jenks_breaks | Compute jenks natural breaks on a sequence of `values`, given `nb_class`,
the number of desired class.
Parameters
----------
values : array-like
The Iterable sequence of numbers (integer/float) to be used.
nb_class : int
The desired number of class (as some other functions requests
a `k` value, `nb_class` is like `k` + 1). Have to be lesser than
the length of `values` and greater than 2.
Returns
-------
breaks : tuple of floats
The computed break values, including minimum and maximum, in order
to have all the bounds for building `nb_class` class,
so the returned tuple has a length of `nb_class` + 1.
Examples
--------
Using nb_class = 3, expecting 4 break values , including min and max :
>>> jenks_breaks(
[1.3, 7.1, 7.3, 2.3, 3.9, 4.1, 7.8, 1.2, 4.3, 7.3, 5.0, 4.3],
nb_class = 3) # Should output (1.2, 2.3, 5.0, 7.8) | jenkspy/core.py | def jenks_breaks(values, nb_class):
"""
Compute jenks natural breaks on a sequence of `values`, given `nb_class`,
the number of desired class.
Parameters
----------
values : array-like
The Iterable sequence of numbers (integer/float) to be used.
nb_class : int
The desired number of class (as some other functions requests
a `k` value, `nb_class` is like `k` + 1). Have to be lesser than
the length of `values` and greater than 2.
Returns
-------
breaks : tuple of floats
The computed break values, including minimum and maximum, in order
to have all the bounds for building `nb_class` class,
so the returned tuple has a length of `nb_class` + 1.
Examples
--------
Using nb_class = 3, expecting 4 break values , including min and max :
>>> jenks_breaks(
[1.3, 7.1, 7.3, 2.3, 3.9, 4.1, 7.8, 1.2, 4.3, 7.3, 5.0, 4.3],
nb_class = 3) # Should output (1.2, 2.3, 5.0, 7.8)
"""
if not isinstance(values, Iterable) or isinstance(values, (str, bytes)):
raise TypeError("A sequence of numbers is expected")
if isinstance(nb_class, float) and int(nb_class) == nb_class:
nb_class = int(nb_class)
if not isinstance(nb_class, int):
raise TypeError(
"Number of class have to be a positive integer: "
"expected an instance of 'int' but found {}"
.format(type(nb_class)))
nb_values = len(values)
if np and isinstance(values, np.ndarray):
values = values[np.argwhere(np.isfinite(values)).reshape(-1)]
else:
values = [i for i in values if isfinite(i)]
if len(values) != nb_values:
warnings.warn('Invalid values encountered (NaN or Inf) were ignored')
nb_values = len(values)
if nb_class >= nb_values or nb_class < 2:
raise ValueError("Number of class have to be an integer "
"greater than 2 and "
"smaller than the number of values to use")
return jenks._jenks_breaks(values, nb_class) | def jenks_breaks(values, nb_class):
"""
Compute jenks natural breaks on a sequence of `values`, given `nb_class`,
the number of desired class.
Parameters
----------
values : array-like
The Iterable sequence of numbers (integer/float) to be used.
nb_class : int
The desired number of class (as some other functions requests
a `k` value, `nb_class` is like `k` + 1). Have to be lesser than
the length of `values` and greater than 2.
Returns
-------
breaks : tuple of floats
The computed break values, including minimum and maximum, in order
to have all the bounds for building `nb_class` class,
so the returned tuple has a length of `nb_class` + 1.
Examples
--------
Using nb_class = 3, expecting 4 break values , including min and max :
>>> jenks_breaks(
[1.3, 7.1, 7.3, 2.3, 3.9, 4.1, 7.8, 1.2, 4.3, 7.3, 5.0, 4.3],
nb_class = 3) # Should output (1.2, 2.3, 5.0, 7.8)
"""
if not isinstance(values, Iterable) or isinstance(values, (str, bytes)):
raise TypeError("A sequence of numbers is expected")
if isinstance(nb_class, float) and int(nb_class) == nb_class:
nb_class = int(nb_class)
if not isinstance(nb_class, int):
raise TypeError(
"Number of class have to be a positive integer: "
"expected an instance of 'int' but found {}"
.format(type(nb_class)))
nb_values = len(values)
if np and isinstance(values, np.ndarray):
values = values[np.argwhere(np.isfinite(values)).reshape(-1)]
else:
values = [i for i in values if isfinite(i)]
if len(values) != nb_values:
warnings.warn('Invalid values encountered (NaN or Inf) were ignored')
nb_values = len(values)
if nb_class >= nb_values or nb_class < 2:
raise ValueError("Number of class have to be an integer "
"greater than 2 and "
"smaller than the number of values to use")
return jenks._jenks_breaks(values, nb_class) | [
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] | f57c0149e1d4dfd2369270ace55981fcf55f699b |
valid | GtkPixbufWrapper.grab_to_file | http://www.pygtk.org/docs/pygtk/class-gdkpixbuf.html.
only "jpeg" or "png" | pyscreenshot/plugins/gtkpixbuf.py | def grab_to_file(self, filename, bbox=None):
"""http://www.pygtk.org/docs/pygtk/class-gdkpixbuf.html.
only "jpeg" or "png"
"""
w = self.gtk.gdk.get_default_root_window()
# Capture the whole screen.
if bbox is None:
sz = w.get_size()
pb = self.gtk.gdk.Pixbuf(
self.gtk.gdk.COLORSPACE_RGB, False, 8, sz[0], sz[1]) # 24bit RGB
pb = pb.get_from_drawable(
w, w.get_colormap(), 0, 0, 0, 0, sz[0], sz[1])
# Only capture what we need. The smaller the capture, the faster.
else:
sz = [bbox[2] - bbox[0], bbox[3] - bbox[1]]
pb = self.gtk.gdk.Pixbuf(
self.gtk.gdk.COLORSPACE_RGB, False, 8, sz[0], sz[1])
pb = pb.get_from_drawable(
w, w.get_colormap(), bbox[0], bbox[1], 0, 0, sz[0], sz[1])
assert pb
ftype = 'png'
if filename.endswith('.jpeg'):
ftype = 'jpeg'
pb.save(filename, ftype) | def grab_to_file(self, filename, bbox=None):
"""http://www.pygtk.org/docs/pygtk/class-gdkpixbuf.html.
only "jpeg" or "png"
"""
w = self.gtk.gdk.get_default_root_window()
# Capture the whole screen.
if bbox is None:
sz = w.get_size()
pb = self.gtk.gdk.Pixbuf(
self.gtk.gdk.COLORSPACE_RGB, False, 8, sz[0], sz[1]) # 24bit RGB
pb = pb.get_from_drawable(
w, w.get_colormap(), 0, 0, 0, 0, sz[0], sz[1])
# Only capture what we need. The smaller the capture, the faster.
else:
sz = [bbox[2] - bbox[0], bbox[3] - bbox[1]]
pb = self.gtk.gdk.Pixbuf(
self.gtk.gdk.COLORSPACE_RGB, False, 8, sz[0], sz[1])
pb = pb.get_from_drawable(
w, w.get_colormap(), bbox[0], bbox[1], 0, 0, sz[0], sz[1])
assert pb
ftype = 'png'
if filename.endswith('.jpeg'):
ftype = 'jpeg'
pb.save(filename, ftype) | [
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valid | Gdk3PixbufWrapper.grab | Grabs an image directly to a buffer.
:param bbox: Optional tuple or list containing (x1, y1, x2, y2) coordinates
of sub-region to capture.
:return: PIL RGB image
:raises: ValueError, if image data does not have 3 channels (RGB), each with 8
bits.
:rtype: Image | pyscreenshot/plugins/gdk3pixbuf.py | def grab(self, bbox=None):
"""Grabs an image directly to a buffer.
:param bbox: Optional tuple or list containing (x1, y1, x2, y2) coordinates
of sub-region to capture.
:return: PIL RGB image
:raises: ValueError, if image data does not have 3 channels (RGB), each with 8
bits.
:rtype: Image
"""
w = Gdk.get_default_root_window()
if bbox is not None:
g = [bbox[0], bbox[1], bbox[2] - bbox[0], bbox[3] - bbox[1]]
else:
g = w.get_geometry()
pb = Gdk.pixbuf_get_from_window(w, *g)
if pb.get_bits_per_sample() != 8:
raise ValueError('Expected 8 bits per pixel.')
elif pb.get_n_channels() != 3:
raise ValueError('Expected RGB image.')
# Read the entire buffer into a python bytes object.
# read_pixel_bytes: New in version 2.32.
pixel_bytes = pb.read_pixel_bytes().get_data() # type: bytes
width, height = g[2], g[3]
# Probably for SSE alignment reasons, the pixbuf has extra data in each line.
# The args after "raw" help handle this; see
# http://effbot.org/imagingbook/decoder.htm#the-raw-decoder
return Image.frombytes(
'RGB', (width, height), pixel_bytes, 'raw', 'RGB', pb.get_rowstride(), 1) | def grab(self, bbox=None):
"""Grabs an image directly to a buffer.
:param bbox: Optional tuple or list containing (x1, y1, x2, y2) coordinates
of sub-region to capture.
:return: PIL RGB image
:raises: ValueError, if image data does not have 3 channels (RGB), each with 8
bits.
:rtype: Image
"""
w = Gdk.get_default_root_window()
if bbox is not None:
g = [bbox[0], bbox[1], bbox[2] - bbox[0], bbox[3] - bbox[1]]
else:
g = w.get_geometry()
pb = Gdk.pixbuf_get_from_window(w, *g)
if pb.get_bits_per_sample() != 8:
raise ValueError('Expected 8 bits per pixel.')
elif pb.get_n_channels() != 3:
raise ValueError('Expected RGB image.')
# Read the entire buffer into a python bytes object.
# read_pixel_bytes: New in version 2.32.
pixel_bytes = pb.read_pixel_bytes().get_data() # type: bytes
width, height = g[2], g[3]
# Probably for SSE alignment reasons, the pixbuf has extra data in each line.
# The args after "raw" help handle this; see
# http://effbot.org/imagingbook/decoder.htm#the-raw-decoder
return Image.frombytes(
'RGB', (width, height), pixel_bytes, 'raw', 'RGB', pb.get_rowstride(), 1) | [
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] | 51010195cbb5361dcd4b414ff132b87244c9e1cb |
valid | grab | Copy the contents of the screen to PIL image memory.
:param bbox: optional bounding box (x1,y1,x2,y2)
:param childprocess: pyscreenshot can cause an error,
if it is used on more different virtual displays
and back-end is not in different process.
Some back-ends are always different processes: scrot, imagemagick
The default is False if the program was started inside IDLE,
otherwise it is True.
:param backend: back-end can be forced if set (examples:scrot, wx,..),
otherwise back-end is automatic | pyscreenshot/__init__.py | def grab(bbox=None, childprocess=None, backend=None):
"""Copy the contents of the screen to PIL image memory.
:param bbox: optional bounding box (x1,y1,x2,y2)
:param childprocess: pyscreenshot can cause an error,
if it is used on more different virtual displays
and back-end is not in different process.
Some back-ends are always different processes: scrot, imagemagick
The default is False if the program was started inside IDLE,
otherwise it is True.
:param backend: back-end can be forced if set (examples:scrot, wx,..),
otherwise back-end is automatic
"""
if childprocess is None:
childprocess = childprocess_default_value()
return _grab(
to_file=False, childprocess=childprocess, backend=backend, bbox=bbox) | def grab(bbox=None, childprocess=None, backend=None):
"""Copy the contents of the screen to PIL image memory.
:param bbox: optional bounding box (x1,y1,x2,y2)
:param childprocess: pyscreenshot can cause an error,
if it is used on more different virtual displays
and back-end is not in different process.
Some back-ends are always different processes: scrot, imagemagick
The default is False if the program was started inside IDLE,
otherwise it is True.
:param backend: back-end can be forced if set (examples:scrot, wx,..),
otherwise back-end is automatic
"""
if childprocess is None:
childprocess = childprocess_default_value()
return _grab(
to_file=False, childprocess=childprocess, backend=backend, bbox=bbox) | [
"Copy",
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"PIL",
"image",
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"."
] | ponty/pyscreenshot | python | https://github.com/ponty/pyscreenshot/blob/51010195cbb5361dcd4b414ff132b87244c9e1cb/pyscreenshot/__init__.py#L51-L67 | [
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valid | grab_to_file | Copy the contents of the screen to a file. Internal function! Use
PIL.Image.save() for saving image to file.
:param filename: file for saving
:param childprocess: see :py:func:`grab`
:param backend: see :py:func:`grab` | pyscreenshot/__init__.py | def grab_to_file(filename, childprocess=None, backend=None):
"""Copy the contents of the screen to a file. Internal function! Use
PIL.Image.save() for saving image to file.
:param filename: file for saving
:param childprocess: see :py:func:`grab`
:param backend: see :py:func:`grab`
"""
if childprocess is None:
childprocess = childprocess_default_value()
return _grab(to_file=True, childprocess=childprocess,
backend=backend, filename=filename) | def grab_to_file(filename, childprocess=None, backend=None):
"""Copy the contents of the screen to a file. Internal function! Use
PIL.Image.save() for saving image to file.
:param filename: file for saving
:param childprocess: see :py:func:`grab`
:param backend: see :py:func:`grab`
"""
if childprocess is None:
childprocess = childprocess_default_value()
return _grab(to_file=True, childprocess=childprocess,
backend=backend, filename=filename) | [
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valid | backend_version | Back-end version.
:param backend: back-end (examples:scrot, wx,..)
:param childprocess: see :py:func:`grab`
:return: version as string | pyscreenshot/__init__.py | def backend_version(backend, childprocess=None):
"""Back-end version.
:param backend: back-end (examples:scrot, wx,..)
:param childprocess: see :py:func:`grab`
:return: version as string
"""
if childprocess is None:
childprocess = childprocess_default_value()
if not childprocess:
return _backend_version(backend)
else:
return run_in_childprocess(_backend_version, None, backend) | def backend_version(backend, childprocess=None):
"""Back-end version.
:param backend: back-end (examples:scrot, wx,..)
:param childprocess: see :py:func:`grab`
:return: version as string
"""
if childprocess is None:
childprocess = childprocess_default_value()
if not childprocess:
return _backend_version(backend)
else:
return run_in_childprocess(_backend_version, None, backend) | [
"Back",
"-",
"end",
"version",
"."
] | ponty/pyscreenshot | python | https://github.com/ponty/pyscreenshot/blob/51010195cbb5361dcd4b414ff132b87244c9e1cb/pyscreenshot/__init__.py#L103-L115 | [
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valid | OutputData.write | Write data from process tiles into PNG file(s).
Parameters
----------
process_tile : ``BufferedTile``
must be member of process ``TilePyramid`` | mapchete/formats/default/png_hillshade.py | def write(self, process_tile, data):
"""
Write data from process tiles into PNG file(s).
Parameters
----------
process_tile : ``BufferedTile``
must be member of process ``TilePyramid``
"""
data = self._prepare_array(data)
if data.mask.all():
logger.debug("data empty, nothing to write")
else:
# in case of S3 output, create an boto3 resource
bucket_resource = get_boto3_bucket(self._bucket) if self._bucket else None
# Convert from process_tile to output_tiles and write
for tile in self.pyramid.intersecting(process_tile):
out_path = self.get_path(tile)
self.prepare_path(tile)
out_tile = BufferedTile(tile, self.pixelbuffer)
write_raster_window(
in_tile=process_tile,
in_data=data,
out_profile=self.profile(out_tile),
out_tile=out_tile,
out_path=out_path,
bucket_resource=bucket_resource
) | def write(self, process_tile, data):
"""
Write data from process tiles into PNG file(s).
Parameters
----------
process_tile : ``BufferedTile``
must be member of process ``TilePyramid``
"""
data = self._prepare_array(data)
if data.mask.all():
logger.debug("data empty, nothing to write")
else:
# in case of S3 output, create an boto3 resource
bucket_resource = get_boto3_bucket(self._bucket) if self._bucket else None
# Convert from process_tile to output_tiles and write
for tile in self.pyramid.intersecting(process_tile):
out_path = self.get_path(tile)
self.prepare_path(tile)
out_tile = BufferedTile(tile, self.pixelbuffer)
write_raster_window(
in_tile=process_tile,
in_data=data,
out_profile=self.profile(out_tile),
out_tile=out_tile,
out_path=out_path,
bucket_resource=bucket_resource
) | [
"Write",
"data",
"from",
"process",
"tiles",
"into",
"PNG",
"file",
"(",
"s",
")",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/png_hillshade.py#L99-L128 | [
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valid | OutputData.read | Read existing process output.
Parameters
----------
output_tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
process output : ``BufferedTile`` with appended data | mapchete/formats/default/png_hillshade.py | def read(self, output_tile, **kwargs):
"""
Read existing process output.
Parameters
----------
output_tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
process output : ``BufferedTile`` with appended data
"""
try:
return ma.masked_values(
read_raster_no_crs(
self.get_path(output_tile), indexes=(4 if self.old_band_num else 2)
),
0
)
except FileNotFoundError:
return self.empty(output_tile) | def read(self, output_tile, **kwargs):
"""
Read existing process output.
Parameters
----------
output_tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
process output : ``BufferedTile`` with appended data
"""
try:
return ma.masked_values(
read_raster_no_crs(
self.get_path(output_tile), indexes=(4 if self.old_band_num else 2)
),
0
)
except FileNotFoundError:
return self.empty(output_tile) | [
"Read",
"existing",
"process",
"output",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/png_hillshade.py#L130-L151 | [
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valid | OutputData.profile | Create a metadata dictionary for rasterio.
Parameters
----------
tile : ``BufferedTile``
Returns
-------
metadata : dictionary
output profile dictionary used for rasterio. | mapchete/formats/default/png_hillshade.py | def profile(self, tile=None):
"""
Create a metadata dictionary for rasterio.
Parameters
----------
tile : ``BufferedTile``
Returns
-------
metadata : dictionary
output profile dictionary used for rasterio.
"""
dst_metadata = dict(self._profile)
if tile is not None:
dst_metadata.update(
width=tile.width,
height=tile.height,
affine=tile.affine, driver="PNG",
crs=tile.crs
)
return dst_metadata | def profile(self, tile=None):
"""
Create a metadata dictionary for rasterio.
Parameters
----------
tile : ``BufferedTile``
Returns
-------
metadata : dictionary
output profile dictionary used for rasterio.
"""
dst_metadata = dict(self._profile)
if tile is not None:
dst_metadata.update(
width=tile.width,
height=tile.height,
affine=tile.affine, driver="PNG",
crs=tile.crs
)
return dst_metadata | [
"Create",
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"for",
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"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/png_hillshade.py#L168-L189 | [
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valid | open | Open a Mapchete process.
Parameters
----------
config : MapcheteConfig object, config dict or path to mapchete file
Mapchete process configuration
mode : string
* ``memory``: Generate process output on demand without reading
pre-existing data or writing new data.
* ``readonly``: Just read data without processing new data.
* ``continue``: (default) Don't overwrite existing output.
* ``overwrite``: Overwrite existing output.
zoom : list or integer
process zoom level or a pair of minimum and maximum zoom level
bounds : tuple
left, bottom, right, top process boundaries in output pyramid
single_input_file : string
single input file if supported by process
with_cache : bool
process output data cached in memory
Returns
-------
Mapchete
a Mapchete process object | mapchete/_core.py | def open(
config, mode="continue", zoom=None, bounds=None, single_input_file=None,
with_cache=False, debug=False
):
"""
Open a Mapchete process.
Parameters
----------
config : MapcheteConfig object, config dict or path to mapchete file
Mapchete process configuration
mode : string
* ``memory``: Generate process output on demand without reading
pre-existing data or writing new data.
* ``readonly``: Just read data without processing new data.
* ``continue``: (default) Don't overwrite existing output.
* ``overwrite``: Overwrite existing output.
zoom : list or integer
process zoom level or a pair of minimum and maximum zoom level
bounds : tuple
left, bottom, right, top process boundaries in output pyramid
single_input_file : string
single input file if supported by process
with_cache : bool
process output data cached in memory
Returns
-------
Mapchete
a Mapchete process object
"""
return Mapchete(
MapcheteConfig(
config, mode=mode, zoom=zoom, bounds=bounds,
single_input_file=single_input_file, debug=debug),
with_cache=with_cache) | def open(
config, mode="continue", zoom=None, bounds=None, single_input_file=None,
with_cache=False, debug=False
):
"""
Open a Mapchete process.
Parameters
----------
config : MapcheteConfig object, config dict or path to mapchete file
Mapchete process configuration
mode : string
* ``memory``: Generate process output on demand without reading
pre-existing data or writing new data.
* ``readonly``: Just read data without processing new data.
* ``continue``: (default) Don't overwrite existing output.
* ``overwrite``: Overwrite existing output.
zoom : list or integer
process zoom level or a pair of minimum and maximum zoom level
bounds : tuple
left, bottom, right, top process boundaries in output pyramid
single_input_file : string
single input file if supported by process
with_cache : bool
process output data cached in memory
Returns
-------
Mapchete
a Mapchete process object
"""
return Mapchete(
MapcheteConfig(
config, mode=mode, zoom=zoom, bounds=bounds,
single_input_file=single_input_file, debug=debug),
with_cache=with_cache) | [
"Open",
"a",
"Mapchete",
"process",
"."
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valid | count_tiles | Count number of tiles intersecting with geometry.
Parameters
----------
geometry : shapely geometry
pyramid : TilePyramid
minzoom : int
maxzoom : int
init_zoom : int
Returns
-------
number of tiles | mapchete/_core.py | def count_tiles(geometry, pyramid, minzoom, maxzoom, init_zoom=0):
"""
Count number of tiles intersecting with geometry.
Parameters
----------
geometry : shapely geometry
pyramid : TilePyramid
minzoom : int
maxzoom : int
init_zoom : int
Returns
-------
number of tiles
"""
if not 0 <= init_zoom <= minzoom <= maxzoom:
raise ValueError("invalid zoom levels given")
# tile buffers are not being taken into account
unbuffered_pyramid = TilePyramid(
pyramid.grid, tile_size=pyramid.tile_size,
metatiling=pyramid.metatiling
)
# make sure no rounding errors occur
geometry = geometry.buffer(-0.000000001)
return _count_tiles(
[
unbuffered_pyramid.tile(*tile_id)
for tile_id in product(
[init_zoom],
range(pyramid.matrix_height(init_zoom)),
range(pyramid.matrix_width(init_zoom))
)
], geometry, minzoom, maxzoom
) | def count_tiles(geometry, pyramid, minzoom, maxzoom, init_zoom=0):
"""
Count number of tiles intersecting with geometry.
Parameters
----------
geometry : shapely geometry
pyramid : TilePyramid
minzoom : int
maxzoom : int
init_zoom : int
Returns
-------
number of tiles
"""
if not 0 <= init_zoom <= minzoom <= maxzoom:
raise ValueError("invalid zoom levels given")
# tile buffers are not being taken into account
unbuffered_pyramid = TilePyramid(
pyramid.grid, tile_size=pyramid.tile_size,
metatiling=pyramid.metatiling
)
# make sure no rounding errors occur
geometry = geometry.buffer(-0.000000001)
return _count_tiles(
[
unbuffered_pyramid.tile(*tile_id)
for tile_id in product(
[init_zoom],
range(pyramid.matrix_height(init_zoom)),
range(pyramid.matrix_width(init_zoom))
)
], geometry, minzoom, maxzoom
) | [
"Count",
"number",
"of",
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"intersecting",
"with",
"geometry",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L805-L839 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | _get_zoom_level | Determine zoom levels. | mapchete/_core.py | def _get_zoom_level(zoom, process):
"""Determine zoom levels."""
if zoom is None:
return reversed(process.config.zoom_levels)
if isinstance(zoom, int):
return [zoom]
elif len(zoom) == 2:
return reversed(range(min(zoom), max(zoom)+1))
elif len(zoom) == 1:
return zoom | def _get_zoom_level(zoom, process):
"""Determine zoom levels."""
if zoom is None:
return reversed(process.config.zoom_levels)
if isinstance(zoom, int):
return [zoom]
elif len(zoom) == 2:
return reversed(range(min(zoom), max(zoom)+1))
elif len(zoom) == 1:
return zoom | [
"Determine",
"zoom",
"levels",
"."
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valid | _process_worker | Worker function running the process. | mapchete/_core.py | def _process_worker(process, process_tile):
"""Worker function running the process."""
logger.debug((process_tile.id, "running on %s" % current_process().name))
# skip execution if overwrite is disabled and tile exists
if (
process.config.mode == "continue" and
process.config.output.tiles_exist(process_tile)
):
logger.debug((process_tile.id, "tile exists, skipping"))
return ProcessInfo(
tile=process_tile,
processed=False,
process_msg="output already exists",
written=False,
write_msg="nothing written"
)
# execute on process tile
else:
with Timer() as t:
try:
output = process.execute(process_tile, raise_nodata=True)
except MapcheteNodataTile:
output = None
processor_message = "processed in %s" % t
logger.debug((process_tile.id, processor_message))
writer_info = process.write(process_tile, output)
return ProcessInfo(
tile=process_tile,
processed=True,
process_msg=processor_message,
written=writer_info.written,
write_msg=writer_info.write_msg
) | def _process_worker(process, process_tile):
"""Worker function running the process."""
logger.debug((process_tile.id, "running on %s" % current_process().name))
# skip execution if overwrite is disabled and tile exists
if (
process.config.mode == "continue" and
process.config.output.tiles_exist(process_tile)
):
logger.debug((process_tile.id, "tile exists, skipping"))
return ProcessInfo(
tile=process_tile,
processed=False,
process_msg="output already exists",
written=False,
write_msg="nothing written"
)
# execute on process tile
else:
with Timer() as t:
try:
output = process.execute(process_tile, raise_nodata=True)
except MapcheteNodataTile:
output = None
processor_message = "processed in %s" % t
logger.debug((process_tile.id, processor_message))
writer_info = process.write(process_tile, output)
return ProcessInfo(
tile=process_tile,
processed=True,
process_msg=processor_message,
written=writer_info.written,
write_msg=writer_info.write_msg
) | [
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valid | Mapchete.get_process_tiles | Yield process tiles.
Tiles intersecting with the input data bounding boxes as well as
process bounds, if provided, are considered process tiles. This is to
avoid iterating through empty tiles.
Parameters
----------
zoom : integer
zoom level process tiles should be returned from; if none is given,
return all process tiles
yields
------
BufferedTile objects | mapchete/_core.py | def get_process_tiles(self, zoom=None):
"""
Yield process tiles.
Tiles intersecting with the input data bounding boxes as well as
process bounds, if provided, are considered process tiles. This is to
avoid iterating through empty tiles.
Parameters
----------
zoom : integer
zoom level process tiles should be returned from; if none is given,
return all process tiles
yields
------
BufferedTile objects
"""
if zoom or zoom == 0:
for tile in self.config.process_pyramid.tiles_from_geom(
self.config.area_at_zoom(zoom), zoom
):
yield tile
else:
for zoom in reversed(self.config.zoom_levels):
for tile in self.config.process_pyramid.tiles_from_geom(
self.config.area_at_zoom(zoom), zoom
):
yield tile | def get_process_tiles(self, zoom=None):
"""
Yield process tiles.
Tiles intersecting with the input data bounding boxes as well as
process bounds, if provided, are considered process tiles. This is to
avoid iterating through empty tiles.
Parameters
----------
zoom : integer
zoom level process tiles should be returned from; if none is given,
return all process tiles
yields
------
BufferedTile objects
"""
if zoom or zoom == 0:
for tile in self.config.process_pyramid.tiles_from_geom(
self.config.area_at_zoom(zoom), zoom
):
yield tile
else:
for zoom in reversed(self.config.zoom_levels):
for tile in self.config.process_pyramid.tiles_from_geom(
self.config.area_at_zoom(zoom), zoom
):
yield tile | [
"Yield",
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"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L113-L141 | [
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valid | Mapchete.batch_process | Process a large batch of tiles.
Parameters
----------
process : MapcheteProcess
process to be run
zoom : list or int
either single zoom level or list of minimum and maximum zoom level;
None processes all (default: None)
tile : tuple
zoom, row and column of tile to be processed (cannot be used with
zoom)
multi : int
number of workers (default: number of CPU cores)
max_chunksize : int
maximum number of process tiles to be queued for each worker;
(default: 1) | mapchete/_core.py | def batch_process(
self, zoom=None, tile=None, multi=cpu_count(), max_chunksize=1
):
"""
Process a large batch of tiles.
Parameters
----------
process : MapcheteProcess
process to be run
zoom : list or int
either single zoom level or list of minimum and maximum zoom level;
None processes all (default: None)
tile : tuple
zoom, row and column of tile to be processed (cannot be used with
zoom)
multi : int
number of workers (default: number of CPU cores)
max_chunksize : int
maximum number of process tiles to be queued for each worker;
(default: 1)
"""
list(self.batch_processor(zoom, tile, multi, max_chunksize)) | def batch_process(
self, zoom=None, tile=None, multi=cpu_count(), max_chunksize=1
):
"""
Process a large batch of tiles.
Parameters
----------
process : MapcheteProcess
process to be run
zoom : list or int
either single zoom level or list of minimum and maximum zoom level;
None processes all (default: None)
tile : tuple
zoom, row and column of tile to be processed (cannot be used with
zoom)
multi : int
number of workers (default: number of CPU cores)
max_chunksize : int
maximum number of process tiles to be queued for each worker;
(default: 1)
"""
list(self.batch_processor(zoom, tile, multi, max_chunksize)) | [
"Process",
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"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L143-L165 | [
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valid | Mapchete.batch_processor | Process a large batch of tiles and yield report messages per tile.
Parameters
----------
zoom : list or int
either single zoom level or list of minimum and maximum zoom level;
None processes all (default: None)
tile : tuple
zoom, row and column of tile to be processed (cannot be used with
zoom)
multi : int
number of workers (default: number of CPU cores)
max_chunksize : int
maximum number of process tiles to be queued for each worker;
(default: 1) | mapchete/_core.py | def batch_processor(
self, zoom=None, tile=None, multi=cpu_count(), max_chunksize=1
):
"""
Process a large batch of tiles and yield report messages per tile.
Parameters
----------
zoom : list or int
either single zoom level or list of minimum and maximum zoom level;
None processes all (default: None)
tile : tuple
zoom, row and column of tile to be processed (cannot be used with
zoom)
multi : int
number of workers (default: number of CPU cores)
max_chunksize : int
maximum number of process tiles to be queued for each worker;
(default: 1)
"""
if zoom and tile:
raise ValueError("use either zoom or tile")
# run single tile
if tile:
yield _run_on_single_tile(self, tile)
# run concurrently
elif multi > 1:
for process_info in _run_with_multiprocessing(
self, list(_get_zoom_level(zoom, self)), multi, max_chunksize
):
yield process_info
# run sequentially
elif multi == 1:
for process_info in _run_without_multiprocessing(
self, list(_get_zoom_level(zoom, self))
):
yield process_info | def batch_processor(
self, zoom=None, tile=None, multi=cpu_count(), max_chunksize=1
):
"""
Process a large batch of tiles and yield report messages per tile.
Parameters
----------
zoom : list or int
either single zoom level or list of minimum and maximum zoom level;
None processes all (default: None)
tile : tuple
zoom, row and column of tile to be processed (cannot be used with
zoom)
multi : int
number of workers (default: number of CPU cores)
max_chunksize : int
maximum number of process tiles to be queued for each worker;
(default: 1)
"""
if zoom and tile:
raise ValueError("use either zoom or tile")
# run single tile
if tile:
yield _run_on_single_tile(self, tile)
# run concurrently
elif multi > 1:
for process_info in _run_with_multiprocessing(
self, list(_get_zoom_level(zoom, self)), multi, max_chunksize
):
yield process_info
# run sequentially
elif multi == 1:
for process_info in _run_without_multiprocessing(
self, list(_get_zoom_level(zoom, self))
):
yield process_info | [
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valid | Mapchete.count_tiles | Count number of tiles intersecting with geometry.
Parameters
----------
geometry : shapely geometry
pyramid : TilePyramid
minzoom : int
maxzoom : int
init_zoom : int
Returns
-------
number of tiles | mapchete/_core.py | def count_tiles(self, minzoom, maxzoom, init_zoom=0):
"""
Count number of tiles intersecting with geometry.
Parameters
----------
geometry : shapely geometry
pyramid : TilePyramid
minzoom : int
maxzoom : int
init_zoom : int
Returns
-------
number of tiles
"""
if (minzoom, maxzoom) not in self._count_tiles_cache:
self._count_tiles_cache[(minzoom, maxzoom)] = count_tiles(
self.config.area_at_zoom(), self.config.process_pyramid,
minzoom, maxzoom, init_zoom=0
)
return self._count_tiles_cache[(minzoom, maxzoom)] | def count_tiles(self, minzoom, maxzoom, init_zoom=0):
"""
Count number of tiles intersecting with geometry.
Parameters
----------
geometry : shapely geometry
pyramid : TilePyramid
minzoom : int
maxzoom : int
init_zoom : int
Returns
-------
number of tiles
"""
if (minzoom, maxzoom) not in self._count_tiles_cache:
self._count_tiles_cache[(minzoom, maxzoom)] = count_tiles(
self.config.area_at_zoom(), self.config.process_pyramid,
minzoom, maxzoom, init_zoom=0
)
return self._count_tiles_cache[(minzoom, maxzoom)] | [
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"geometry",
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L206-L227 | [
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valid | Mapchete.execute | Run the Mapchete process.
Execute, write and return data.
Parameters
----------
process_tile : Tile or tile index tuple
Member of the process tile pyramid (not necessarily the output
pyramid, if output has a different metatiling setting)
Returns
-------
data : NumPy array or features
process output | mapchete/_core.py | def execute(self, process_tile, raise_nodata=False):
"""
Run the Mapchete process.
Execute, write and return data.
Parameters
----------
process_tile : Tile or tile index tuple
Member of the process tile pyramid (not necessarily the output
pyramid, if output has a different metatiling setting)
Returns
-------
data : NumPy array or features
process output
"""
if self.config.mode not in ["memory", "continue", "overwrite"]:
raise ValueError("process mode must be memory, continue or overwrite")
if isinstance(process_tile, tuple):
process_tile = self.config.process_pyramid.tile(*process_tile)
elif isinstance(process_tile, BufferedTile):
pass
else:
raise TypeError("process_tile must be tuple or BufferedTile")
if process_tile.zoom not in self.config.zoom_levels:
return self.config.output.empty(process_tile)
return self._execute(process_tile, raise_nodata=raise_nodata) | def execute(self, process_tile, raise_nodata=False):
"""
Run the Mapchete process.
Execute, write and return data.
Parameters
----------
process_tile : Tile or tile index tuple
Member of the process tile pyramid (not necessarily the output
pyramid, if output has a different metatiling setting)
Returns
-------
data : NumPy array or features
process output
"""
if self.config.mode not in ["memory", "continue", "overwrite"]:
raise ValueError("process mode must be memory, continue or overwrite")
if isinstance(process_tile, tuple):
process_tile = self.config.process_pyramid.tile(*process_tile)
elif isinstance(process_tile, BufferedTile):
pass
else:
raise TypeError("process_tile must be tuple or BufferedTile")
if process_tile.zoom not in self.config.zoom_levels:
return self.config.output.empty(process_tile)
return self._execute(process_tile, raise_nodata=raise_nodata) | [
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valid | Mapchete.read | Read from written process output.
Parameters
----------
output_tile : BufferedTile or tile index tuple
Member of the output tile pyramid (not necessarily the process
pyramid, if output has a different metatiling setting)
Returns
-------
data : NumPy array or features
process output | mapchete/_core.py | def read(self, output_tile):
"""
Read from written process output.
Parameters
----------
output_tile : BufferedTile or tile index tuple
Member of the output tile pyramid (not necessarily the process
pyramid, if output has a different metatiling setting)
Returns
-------
data : NumPy array or features
process output
"""
if self.config.mode not in ["readonly", "continue", "overwrite"]:
raise ValueError("process mode must be readonly, continue or overwrite")
if isinstance(output_tile, tuple):
output_tile = self.config.output_pyramid.tile(*output_tile)
elif isinstance(output_tile, BufferedTile):
pass
else:
raise TypeError("output_tile must be tuple or BufferedTile")
return self.config.output.read(output_tile) | def read(self, output_tile):
"""
Read from written process output.
Parameters
----------
output_tile : BufferedTile or tile index tuple
Member of the output tile pyramid (not necessarily the process
pyramid, if output has a different metatiling setting)
Returns
-------
data : NumPy array or features
process output
"""
if self.config.mode not in ["readonly", "continue", "overwrite"]:
raise ValueError("process mode must be readonly, continue or overwrite")
if isinstance(output_tile, tuple):
output_tile = self.config.output_pyramid.tile(*output_tile)
elif isinstance(output_tile, BufferedTile):
pass
else:
raise TypeError("output_tile must be tuple or BufferedTile")
return self.config.output.read(output_tile) | [
"Read",
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"."
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valid | Mapchete.write | Write data into output format.
Parameters
----------
process_tile : BufferedTile or tile index tuple
process tile
data : NumPy array or features
data to be written | mapchete/_core.py | def write(self, process_tile, data):
"""
Write data into output format.
Parameters
----------
process_tile : BufferedTile or tile index tuple
process tile
data : NumPy array or features
data to be written
"""
if isinstance(process_tile, tuple):
process_tile = self.config.process_pyramid.tile(*process_tile)
elif not isinstance(process_tile, BufferedTile):
raise ValueError("invalid process_tile type: %s" % type(process_tile))
if self.config.mode not in ["continue", "overwrite"]:
raise ValueError("cannot write output in current process mode")
if self.config.mode == "continue" and (
self.config.output.tiles_exist(process_tile)
):
message = "output exists, not overwritten"
logger.debug((process_tile.id, message))
return ProcessInfo(
tile=process_tile,
processed=False,
process_msg=None,
written=False,
write_msg=message
)
elif data is None:
message = "output empty, nothing written"
logger.debug((process_tile.id, message))
return ProcessInfo(
tile=process_tile,
processed=False,
process_msg=None,
written=False,
write_msg=message
)
else:
with Timer() as t:
self.config.output.write(process_tile=process_tile, data=data)
message = "output written in %s" % t
logger.debug((process_tile.id, message))
return ProcessInfo(
tile=process_tile,
processed=False,
process_msg=None,
written=True,
write_msg=message
) | def write(self, process_tile, data):
"""
Write data into output format.
Parameters
----------
process_tile : BufferedTile or tile index tuple
process tile
data : NumPy array or features
data to be written
"""
if isinstance(process_tile, tuple):
process_tile = self.config.process_pyramid.tile(*process_tile)
elif not isinstance(process_tile, BufferedTile):
raise ValueError("invalid process_tile type: %s" % type(process_tile))
if self.config.mode not in ["continue", "overwrite"]:
raise ValueError("cannot write output in current process mode")
if self.config.mode == "continue" and (
self.config.output.tiles_exist(process_tile)
):
message = "output exists, not overwritten"
logger.debug((process_tile.id, message))
return ProcessInfo(
tile=process_tile,
processed=False,
process_msg=None,
written=False,
write_msg=message
)
elif data is None:
message = "output empty, nothing written"
logger.debug((process_tile.id, message))
return ProcessInfo(
tile=process_tile,
processed=False,
process_msg=None,
written=False,
write_msg=message
)
else:
with Timer() as t:
self.config.output.write(process_tile=process_tile, data=data)
message = "output written in %s" % t
logger.debug((process_tile.id, message))
return ProcessInfo(
tile=process_tile,
processed=False,
process_msg=None,
written=True,
write_msg=message
) | [
"Write",
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L286-L337 | [
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valid | Mapchete.get_raw_output | Get output raw data.
This function won't work with multiprocessing, as it uses the
``threading.Lock()`` class.
Parameters
----------
tile : tuple, Tile or BufferedTile
If a tile index is given, a tile from the output pyramid will be
assumed. Tile cannot be bigger than process tile!
Returns
-------
data : NumPy array or features
process output | mapchete/_core.py | def get_raw_output(self, tile, _baselevel_readonly=False):
"""
Get output raw data.
This function won't work with multiprocessing, as it uses the
``threading.Lock()`` class.
Parameters
----------
tile : tuple, Tile or BufferedTile
If a tile index is given, a tile from the output pyramid will be
assumed. Tile cannot be bigger than process tile!
Returns
-------
data : NumPy array or features
process output
"""
if not isinstance(tile, (BufferedTile, tuple)):
raise TypeError("'tile' must be a tuple or BufferedTile")
if isinstance(tile, tuple):
tile = self.config.output_pyramid.tile(*tile)
if _baselevel_readonly:
tile = self.config.baselevels["tile_pyramid"].tile(*tile.id)
# Return empty data if zoom level is outside of process zoom levels.
if tile.zoom not in self.config.zoom_levels:
return self.config.output.empty(tile)
# TODO implement reprojection
if tile.crs != self.config.process_pyramid.crs:
raise NotImplementedError(
"reprojection between processes not yet implemented"
)
if self.config.mode == "memory":
# Determine affected process Tile and check whether it is already
# cached.
process_tile = self.config.process_pyramid.intersecting(tile)[0]
return self._extract(
in_tile=process_tile,
in_data=self._execute_using_cache(process_tile),
out_tile=tile
)
# TODO: cases where tile intersects with multiple process tiles
process_tile = self.config.process_pyramid.intersecting(tile)[0]
# get output_tiles that intersect with current tile
if tile.pixelbuffer > self.config.output.pixelbuffer:
output_tiles = list(self.config.output_pyramid.tiles_from_bounds(
tile.bounds, tile.zoom
))
else:
output_tiles = self.config.output_pyramid.intersecting(tile)
if self.config.mode == "readonly" or _baselevel_readonly:
if self.config.output.tiles_exist(process_tile):
return self._read_existing_output(tile, output_tiles)
else:
return self.config.output.empty(tile)
elif self.config.mode == "continue" and not _baselevel_readonly:
if self.config.output.tiles_exist(process_tile):
return self._read_existing_output(tile, output_tiles)
else:
return self._process_and_overwrite_output(tile, process_tile)
elif self.config.mode == "overwrite" and not _baselevel_readonly:
return self._process_and_overwrite_output(tile, process_tile) | def get_raw_output(self, tile, _baselevel_readonly=False):
"""
Get output raw data.
This function won't work with multiprocessing, as it uses the
``threading.Lock()`` class.
Parameters
----------
tile : tuple, Tile or BufferedTile
If a tile index is given, a tile from the output pyramid will be
assumed. Tile cannot be bigger than process tile!
Returns
-------
data : NumPy array or features
process output
"""
if not isinstance(tile, (BufferedTile, tuple)):
raise TypeError("'tile' must be a tuple or BufferedTile")
if isinstance(tile, tuple):
tile = self.config.output_pyramid.tile(*tile)
if _baselevel_readonly:
tile = self.config.baselevels["tile_pyramid"].tile(*tile.id)
# Return empty data if zoom level is outside of process zoom levels.
if tile.zoom not in self.config.zoom_levels:
return self.config.output.empty(tile)
# TODO implement reprojection
if tile.crs != self.config.process_pyramid.crs:
raise NotImplementedError(
"reprojection between processes not yet implemented"
)
if self.config.mode == "memory":
# Determine affected process Tile and check whether it is already
# cached.
process_tile = self.config.process_pyramid.intersecting(tile)[0]
return self._extract(
in_tile=process_tile,
in_data=self._execute_using_cache(process_tile),
out_tile=tile
)
# TODO: cases where tile intersects with multiple process tiles
process_tile = self.config.process_pyramid.intersecting(tile)[0]
# get output_tiles that intersect with current tile
if tile.pixelbuffer > self.config.output.pixelbuffer:
output_tiles = list(self.config.output_pyramid.tiles_from_bounds(
tile.bounds, tile.zoom
))
else:
output_tiles = self.config.output_pyramid.intersecting(tile)
if self.config.mode == "readonly" or _baselevel_readonly:
if self.config.output.tiles_exist(process_tile):
return self._read_existing_output(tile, output_tiles)
else:
return self.config.output.empty(tile)
elif self.config.mode == "continue" and not _baselevel_readonly:
if self.config.output.tiles_exist(process_tile):
return self._read_existing_output(tile, output_tiles)
else:
return self._process_and_overwrite_output(tile, process_tile)
elif self.config.mode == "overwrite" and not _baselevel_readonly:
return self._process_and_overwrite_output(tile, process_tile) | [
"Get",
"output",
"raw",
"data",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L339-L406 | [
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valid | Mapchete._extract | Extract data from tile. | mapchete/_core.py | def _extract(self, in_tile=None, in_data=None, out_tile=None):
"""Extract data from tile."""
return self.config.output.extract_subset(
input_data_tiles=[(in_tile, in_data)],
out_tile=out_tile
) | def _extract(self, in_tile=None, in_data=None, out_tile=None):
"""Extract data from tile."""
return self.config.output.extract_subset(
input_data_tiles=[(in_tile, in_data)],
out_tile=out_tile
) | [
"Extract",
"data",
"from",
"tile",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L457-L462 | [
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valid | MapcheteProcess.read | Read existing output data from a previous run.
Returns
-------
process output : NumPy array (raster) or feature iterator (vector) | mapchete/_core.py | def read(self, **kwargs):
"""
Read existing output data from a previous run.
Returns
-------
process output : NumPy array (raster) or feature iterator (vector)
"""
if self.tile.pixelbuffer > self.config.output.pixelbuffer:
output_tiles = list(self.config.output_pyramid.tiles_from_bounds(
self.tile.bounds, self.tile.zoom
))
else:
output_tiles = self.config.output_pyramid.intersecting(self.tile)
return self.config.output.extract_subset(
input_data_tiles=[
(output_tile, self.config.output.read(output_tile))
for output_tile in output_tiles
],
out_tile=self.tile,
) | def read(self, **kwargs):
"""
Read existing output data from a previous run.
Returns
-------
process output : NumPy array (raster) or feature iterator (vector)
"""
if self.tile.pixelbuffer > self.config.output.pixelbuffer:
output_tiles = list(self.config.output_pyramid.tiles_from_bounds(
self.tile.bounds, self.tile.zoom
))
else:
output_tiles = self.config.output_pyramid.intersecting(self.tile)
return self.config.output.extract_subset(
input_data_tiles=[
(output_tile, self.config.output.read(output_tile))
for output_tile in output_tiles
],
out_tile=self.tile,
) | [
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"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L620-L640 | [
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valid | MapcheteProcess.open | Open input data.
Parameters
----------
input_id : string
input identifier from configuration file or file path
kwargs : driver specific parameters (e.g. resampling)
Returns
-------
tiled input data : InputTile
reprojected input data within tile | mapchete/_core.py | def open(self, input_id, **kwargs):
"""
Open input data.
Parameters
----------
input_id : string
input identifier from configuration file or file path
kwargs : driver specific parameters (e.g. resampling)
Returns
-------
tiled input data : InputTile
reprojected input data within tile
"""
if not isinstance(input_id, str):
return input_id.open(self.tile, **kwargs)
if input_id not in self.params["input"]:
raise ValueError("%s not found in config as input file" % input_id)
return self.params["input"][input_id].open(self.tile, **kwargs) | def open(self, input_id, **kwargs):
"""
Open input data.
Parameters
----------
input_id : string
input identifier from configuration file or file path
kwargs : driver specific parameters (e.g. resampling)
Returns
-------
tiled input data : InputTile
reprojected input data within tile
"""
if not isinstance(input_id, str):
return input_id.open(self.tile, **kwargs)
if input_id not in self.params["input"]:
raise ValueError("%s not found in config as input file" % input_id)
return self.params["input"][input_id].open(self.tile, **kwargs) | [
"Open",
"input",
"data",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L642-L661 | [
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valid | MapcheteProcess.hillshade | Calculate hillshading from elevation data.
Parameters
----------
elevation : array
input elevation data
azimuth : float
horizontal angle of light source (315: North-West)
altitude : float
vertical angle of light source (90 would result in slope shading)
z : float
vertical exaggeration factor
scale : float
scale factor of pixel size units versus height units (insert 112000
when having elevation values in meters in a geodetic projection)
Returns
-------
hillshade : array | mapchete/_core.py | def hillshade(
self, elevation, azimuth=315.0, altitude=45.0, z=1.0, scale=1.0
):
"""
Calculate hillshading from elevation data.
Parameters
----------
elevation : array
input elevation data
azimuth : float
horizontal angle of light source (315: North-West)
altitude : float
vertical angle of light source (90 would result in slope shading)
z : float
vertical exaggeration factor
scale : float
scale factor of pixel size units versus height units (insert 112000
when having elevation values in meters in a geodetic projection)
Returns
-------
hillshade : array
"""
return commons_hillshade.hillshade(
elevation, self, azimuth, altitude, z, scale) | def hillshade(
self, elevation, azimuth=315.0, altitude=45.0, z=1.0, scale=1.0
):
"""
Calculate hillshading from elevation data.
Parameters
----------
elevation : array
input elevation data
azimuth : float
horizontal angle of light source (315: North-West)
altitude : float
vertical angle of light source (90 would result in slope shading)
z : float
vertical exaggeration factor
scale : float
scale factor of pixel size units versus height units (insert 112000
when having elevation values in meters in a geodetic projection)
Returns
-------
hillshade : array
"""
return commons_hillshade.hillshade(
elevation, self, azimuth, altitude, z, scale) | [
"Calculate",
"hillshading",
"from",
"elevation",
"data",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L663-L688 | [
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valid | MapcheteProcess.contours | Extract contour lines from elevation data.
Parameters
----------
elevation : array
input elevation data
interval : integer
elevation value interval when drawing contour lines
field : string
output field name containing elevation value
base : integer
elevation base value the intervals are computed from
Returns
-------
contours : iterable
contours as GeoJSON-like pairs of properties and geometry | mapchete/_core.py | def contours(
self, elevation, interval=100, field='elev', base=0
):
"""
Extract contour lines from elevation data.
Parameters
----------
elevation : array
input elevation data
interval : integer
elevation value interval when drawing contour lines
field : string
output field name containing elevation value
base : integer
elevation base value the intervals are computed from
Returns
-------
contours : iterable
contours as GeoJSON-like pairs of properties and geometry
"""
return commons_contours.extract_contours(
elevation, self.tile, interval=interval, field=field, base=base) | def contours(
self, elevation, interval=100, field='elev', base=0
):
"""
Extract contour lines from elevation data.
Parameters
----------
elevation : array
input elevation data
interval : integer
elevation value interval when drawing contour lines
field : string
output field name containing elevation value
base : integer
elevation base value the intervals are computed from
Returns
-------
contours : iterable
contours as GeoJSON-like pairs of properties and geometry
"""
return commons_contours.extract_contours(
elevation, self.tile, interval=interval, field=field, base=base) | [
"Extract",
"contour",
"lines",
"from",
"elevation",
"data",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L690-L713 | [
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valid | MapcheteProcess.clip | Clip array by geometry.
Parameters
----------
array : array
raster data to be clipped
geometries : iterable
geometries used to clip source array
inverted : bool
invert clipping (default: False)
clip_buffer : int
buffer (in pixels) geometries before applying clip
Returns
-------
clipped array : array | mapchete/_core.py | def clip(
self, array, geometries, inverted=False, clip_buffer=0
):
"""
Clip array by geometry.
Parameters
----------
array : array
raster data to be clipped
geometries : iterable
geometries used to clip source array
inverted : bool
invert clipping (default: False)
clip_buffer : int
buffer (in pixels) geometries before applying clip
Returns
-------
clipped array : array
"""
return commons_clip.clip_array_with_vector(
array, self.tile.affine, geometries,
inverted=inverted, clip_buffer=clip_buffer*self.tile.pixel_x_size) | def clip(
self, array, geometries, inverted=False, clip_buffer=0
):
"""
Clip array by geometry.
Parameters
----------
array : array
raster data to be clipped
geometries : iterable
geometries used to clip source array
inverted : bool
invert clipping (default: False)
clip_buffer : int
buffer (in pixels) geometries before applying clip
Returns
-------
clipped array : array
"""
return commons_clip.clip_array_with_vector(
array, self.tile.affine, geometries,
inverted=inverted, clip_buffer=clip_buffer*self.tile.pixel_x_size) | [
"Clip",
"array",
"by",
"geometry",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/_core.py#L715-L738 | [
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valid | clip_array_with_vector | Clip input array with a vector list.
Parameters
----------
array : array
input raster data
array_affine : Affine
Affine object describing the raster's geolocation
geometries : iterable
iterable of dictionaries, where every entry has a 'geometry' and
'properties' key.
inverted : bool
invert clip (default: False)
clip_buffer : integer
buffer (in pixels) geometries before clipping
Returns
-------
clipped array : array | mapchete/commons/clip.py | def clip_array_with_vector(
array, array_affine, geometries, inverted=False, clip_buffer=0
):
"""
Clip input array with a vector list.
Parameters
----------
array : array
input raster data
array_affine : Affine
Affine object describing the raster's geolocation
geometries : iterable
iterable of dictionaries, where every entry has a 'geometry' and
'properties' key.
inverted : bool
invert clip (default: False)
clip_buffer : integer
buffer (in pixels) geometries before clipping
Returns
-------
clipped array : array
"""
# buffer input geometries and clean up
buffered_geometries = []
for feature in geometries:
feature_geom = to_shape(feature["geometry"])
if feature_geom.is_empty:
continue
if feature_geom.geom_type == "GeometryCollection":
# for GeometryCollections apply buffer to every subgeometry
# and make union
buffered_geom = unary_union([
g.buffer(clip_buffer) for g in feature_geom])
else:
buffered_geom = feature_geom.buffer(clip_buffer)
if not buffered_geom.is_empty:
buffered_geometries.append(buffered_geom)
# mask raster by buffered geometries
if buffered_geometries:
if array.ndim == 2:
return ma.masked_array(
array, geometry_mask(
buffered_geometries, array.shape, array_affine,
invert=inverted))
elif array.ndim == 3:
mask = geometry_mask(
buffered_geometries, (array.shape[1], array.shape[2]),
array_affine, invert=inverted)
return ma.masked_array(
array, mask=np.stack((mask for band in array)))
# if no geometries, return unmasked array
else:
fill = False if inverted else True
return ma.masked_array(
array, mask=np.full(array.shape, fill, dtype=bool)) | def clip_array_with_vector(
array, array_affine, geometries, inverted=False, clip_buffer=0
):
"""
Clip input array with a vector list.
Parameters
----------
array : array
input raster data
array_affine : Affine
Affine object describing the raster's geolocation
geometries : iterable
iterable of dictionaries, where every entry has a 'geometry' and
'properties' key.
inverted : bool
invert clip (default: False)
clip_buffer : integer
buffer (in pixels) geometries before clipping
Returns
-------
clipped array : array
"""
# buffer input geometries and clean up
buffered_geometries = []
for feature in geometries:
feature_geom = to_shape(feature["geometry"])
if feature_geom.is_empty:
continue
if feature_geom.geom_type == "GeometryCollection":
# for GeometryCollections apply buffer to every subgeometry
# and make union
buffered_geom = unary_union([
g.buffer(clip_buffer) for g in feature_geom])
else:
buffered_geom = feature_geom.buffer(clip_buffer)
if not buffered_geom.is_empty:
buffered_geometries.append(buffered_geom)
# mask raster by buffered geometries
if buffered_geometries:
if array.ndim == 2:
return ma.masked_array(
array, geometry_mask(
buffered_geometries, array.shape, array_affine,
invert=inverted))
elif array.ndim == 3:
mask = geometry_mask(
buffered_geometries, (array.shape[1], array.shape[2]),
array_affine, invert=inverted)
return ma.masked_array(
array, mask=np.stack((mask for band in array)))
# if no geometries, return unmasked array
else:
fill = False if inverted else True
return ma.masked_array(
array, mask=np.full(array.shape, fill, dtype=bool)) | [
"Clip",
"input",
"array",
"with",
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"vector",
"list",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/commons/clip.py#L10-L68 | [
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valid | pyramid | Create tile pyramid out of input raster. | mapchete/cli/default/pyramid.py | def pyramid(
input_raster,
output_dir,
pyramid_type=None,
output_format=None,
resampling_method=None,
scale_method=None,
zoom=None,
bounds=None,
overwrite=False,
debug=False
):
"""Create tile pyramid out of input raster."""
bounds = bounds if bounds else None
options = dict(
pyramid_type=pyramid_type,
scale_method=scale_method,
output_format=output_format,
resampling=resampling_method,
zoom=zoom,
bounds=bounds,
overwrite=overwrite
)
raster2pyramid(input_raster, output_dir, options) | def pyramid(
input_raster,
output_dir,
pyramid_type=None,
output_format=None,
resampling_method=None,
scale_method=None,
zoom=None,
bounds=None,
overwrite=False,
debug=False
):
"""Create tile pyramid out of input raster."""
bounds = bounds if bounds else None
options = dict(
pyramid_type=pyramid_type,
scale_method=scale_method,
output_format=output_format,
resampling=resampling_method,
zoom=zoom,
bounds=bounds,
overwrite=overwrite
)
raster2pyramid(input_raster, output_dir, options) | [
"Create",
"tile",
"pyramid",
"out",
"of",
"input",
"raster",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/cli/default/pyramid.py#L39-L62 | [
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valid | raster2pyramid | Create a tile pyramid out of an input raster dataset. | mapchete/cli/default/pyramid.py | def raster2pyramid(input_file, output_dir, options):
"""Create a tile pyramid out of an input raster dataset."""
pyramid_type = options["pyramid_type"]
scale_method = options["scale_method"]
output_format = options["output_format"]
resampling = options["resampling"]
zoom = options["zoom"]
bounds = options["bounds"]
mode = "overwrite" if options["overwrite"] else "continue"
# Prepare process parameters
minzoom, maxzoom = _get_zoom(zoom, input_file, pyramid_type)
with rasterio.open(input_file, "r") as input_raster:
output_bands = input_raster.count
input_dtype = input_raster.dtypes[0]
output_dtype = input_raster.dtypes[0]
nodataval = input_raster.nodatavals[0]
nodataval = nodataval if nodataval else 0
if output_format == "PNG" and output_bands > 3:
output_bands = 3
output_dtype = 'uint8'
scales_minmax = ()
if scale_method == "dtype_scale":
for index in range(1, output_bands+1):
scales_minmax += (DTYPE_RANGES[input_dtype], )
elif scale_method == "minmax_scale":
for index in range(1, output_bands+1):
band = input_raster.read(index)
scales_minmax += ((band.min(), band.max()), )
elif scale_method == "crop":
for index in range(1, output_bands+1):
scales_minmax += ((0, 255), )
if input_dtype == "uint8":
scale_method = None
scales_minmax = ()
for index in range(1, output_bands+1):
scales_minmax += ((None, None), )
# Create configuration
config = dict(
process="mapchete.processes.pyramid.tilify",
output={
"path": output_dir,
"format": output_format,
"bands": output_bands,
"dtype": output_dtype
},
pyramid=dict(pixelbuffer=5, grid=pyramid_type),
scale_method=scale_method,
scales_minmax=scales_minmax,
input={"raster": input_file},
config_dir=os.getcwd(),
zoom_levels=dict(min=minzoom, max=maxzoom),
nodataval=nodataval,
resampling=resampling,
bounds=bounds,
baselevel={"zoom": maxzoom, "resampling": resampling},
mode=mode
)
# create process
with mapchete.open(config, zoom=zoom, bounds=bounds) as mp:
# prepare output directory
if not os.path.exists(output_dir):
os.makedirs(output_dir)
# run process
mp.batch_process(zoom=[minzoom, maxzoom]) | def raster2pyramid(input_file, output_dir, options):
"""Create a tile pyramid out of an input raster dataset."""
pyramid_type = options["pyramid_type"]
scale_method = options["scale_method"]
output_format = options["output_format"]
resampling = options["resampling"]
zoom = options["zoom"]
bounds = options["bounds"]
mode = "overwrite" if options["overwrite"] else "continue"
# Prepare process parameters
minzoom, maxzoom = _get_zoom(zoom, input_file, pyramid_type)
with rasterio.open(input_file, "r") as input_raster:
output_bands = input_raster.count
input_dtype = input_raster.dtypes[0]
output_dtype = input_raster.dtypes[0]
nodataval = input_raster.nodatavals[0]
nodataval = nodataval if nodataval else 0
if output_format == "PNG" and output_bands > 3:
output_bands = 3
output_dtype = 'uint8'
scales_minmax = ()
if scale_method == "dtype_scale":
for index in range(1, output_bands+1):
scales_minmax += (DTYPE_RANGES[input_dtype], )
elif scale_method == "minmax_scale":
for index in range(1, output_bands+1):
band = input_raster.read(index)
scales_minmax += ((band.min(), band.max()), )
elif scale_method == "crop":
for index in range(1, output_bands+1):
scales_minmax += ((0, 255), )
if input_dtype == "uint8":
scale_method = None
scales_minmax = ()
for index in range(1, output_bands+1):
scales_minmax += ((None, None), )
# Create configuration
config = dict(
process="mapchete.processes.pyramid.tilify",
output={
"path": output_dir,
"format": output_format,
"bands": output_bands,
"dtype": output_dtype
},
pyramid=dict(pixelbuffer=5, grid=pyramid_type),
scale_method=scale_method,
scales_minmax=scales_minmax,
input={"raster": input_file},
config_dir=os.getcwd(),
zoom_levels=dict(min=minzoom, max=maxzoom),
nodataval=nodataval,
resampling=resampling,
bounds=bounds,
baselevel={"zoom": maxzoom, "resampling": resampling},
mode=mode
)
# create process
with mapchete.open(config, zoom=zoom, bounds=bounds) as mp:
# prepare output directory
if not os.path.exists(output_dir):
os.makedirs(output_dir)
# run process
mp.batch_process(zoom=[minzoom, maxzoom]) | [
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valid | _get_zoom | Determine minimum and maximum zoomlevel. | mapchete/cli/default/pyramid.py | def _get_zoom(zoom, input_raster, pyramid_type):
"""Determine minimum and maximum zoomlevel."""
if not zoom:
minzoom = 1
maxzoom = get_best_zoom_level(input_raster, pyramid_type)
elif len(zoom) == 1:
minzoom = zoom[0]
maxzoom = zoom[0]
elif len(zoom) == 2:
if zoom[0] < zoom[1]:
minzoom = zoom[0]
maxzoom = zoom[1]
else:
minzoom = zoom[1]
maxzoom = zoom[0]
return minzoom, maxzoom | def _get_zoom(zoom, input_raster, pyramid_type):
"""Determine minimum and maximum zoomlevel."""
if not zoom:
minzoom = 1
maxzoom = get_best_zoom_level(input_raster, pyramid_type)
elif len(zoom) == 1:
minzoom = zoom[0]
maxzoom = zoom[0]
elif len(zoom) == 2:
if zoom[0] < zoom[1]:
minzoom = zoom[0]
maxzoom = zoom[1]
else:
minzoom = zoom[1]
maxzoom = zoom[0]
return minzoom, maxzoom | [
"Determine",
"minimum",
"and",
"maximum",
"zoomlevel",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/cli/default/pyramid.py#L134-L149 | [
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valid | validate_values | Validate whether value is found in config and has the right type.
Parameters
----------
config : dict
configuration dictionary
values : list
list of (str, type) tuples of values and value types expected in config
Returns
-------
True if config is valid.
Raises
------
Exception if value is not found or has the wrong type. | mapchete/config.py | def validate_values(config, values):
"""
Validate whether value is found in config and has the right type.
Parameters
----------
config : dict
configuration dictionary
values : list
list of (str, type) tuples of values and value types expected in config
Returns
-------
True if config is valid.
Raises
------
Exception if value is not found or has the wrong type.
"""
if not isinstance(config, dict):
raise TypeError("config must be a dictionary")
for value, vtype in values:
if value not in config:
raise ValueError("%s not given" % value)
if not isinstance(config[value], vtype):
raise TypeError("%s must be %s" % (value, vtype))
return True | def validate_values(config, values):
"""
Validate whether value is found in config and has the right type.
Parameters
----------
config : dict
configuration dictionary
values : list
list of (str, type) tuples of values and value types expected in config
Returns
-------
True if config is valid.
Raises
------
Exception if value is not found or has the wrong type.
"""
if not isinstance(config, dict):
raise TypeError("config must be a dictionary")
for value, vtype in values:
if value not in config:
raise ValueError("%s not given" % value)
if not isinstance(config[value], vtype):
raise TypeError("%s must be %s" % (value, vtype))
return True | [
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valid | get_hash | Return hash of x. | mapchete/config.py | def get_hash(x):
"""Return hash of x."""
if isinstance(x, str):
return hash(x)
elif isinstance(x, dict):
return hash(yaml.dump(x)) | def get_hash(x):
"""Return hash of x."""
if isinstance(x, str):
return hash(x)
elif isinstance(x, dict):
return hash(yaml.dump(x)) | [
"Return",
"hash",
"of",
"x",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L607-L612 | [
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valid | get_zoom_levels | Validate and return zoom levels. | mapchete/config.py | def get_zoom_levels(process_zoom_levels=None, init_zoom_levels=None):
"""Validate and return zoom levels."""
process_zoom_levels = _validate_zooms(process_zoom_levels)
if init_zoom_levels is None:
return process_zoom_levels
else:
init_zoom_levels = _validate_zooms(init_zoom_levels)
if not set(init_zoom_levels).issubset(set(process_zoom_levels)):
raise MapcheteConfigError(
"init zooms must be a subset of process zoom")
return init_zoom_levels | def get_zoom_levels(process_zoom_levels=None, init_zoom_levels=None):
"""Validate and return zoom levels."""
process_zoom_levels = _validate_zooms(process_zoom_levels)
if init_zoom_levels is None:
return process_zoom_levels
else:
init_zoom_levels = _validate_zooms(init_zoom_levels)
if not set(init_zoom_levels).issubset(set(process_zoom_levels)):
raise MapcheteConfigError(
"init zooms must be a subset of process zoom")
return init_zoom_levels | [
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L615-L625 | [
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valid | snap_bounds | Snaps bounds to tiles boundaries of specific zoom level.
Parameters
----------
bounds : bounds to be snapped
pyramid : TilePyramid
zoom : int
Returns
-------
Bounds(left, bottom, right, top) | mapchete/config.py | def snap_bounds(bounds=None, pyramid=None, zoom=None):
"""
Snaps bounds to tiles boundaries of specific zoom level.
Parameters
----------
bounds : bounds to be snapped
pyramid : TilePyramid
zoom : int
Returns
-------
Bounds(left, bottom, right, top)
"""
if not isinstance(bounds, (tuple, list)):
raise TypeError("bounds must be either a tuple or a list")
if len(bounds) != 4:
raise ValueError("bounds has to have exactly four values")
if not isinstance(pyramid, BufferedTilePyramid):
raise TypeError("pyramid has to be a BufferedTilePyramid")
bounds = Bounds(*bounds)
lb = pyramid.tile_from_xy(bounds.left, bounds.bottom, zoom, on_edge_use="rt").bounds
rt = pyramid.tile_from_xy(bounds.right, bounds.top, zoom, on_edge_use="lb").bounds
return Bounds(lb.left, lb.bottom, rt.right, rt.top) | def snap_bounds(bounds=None, pyramid=None, zoom=None):
"""
Snaps bounds to tiles boundaries of specific zoom level.
Parameters
----------
bounds : bounds to be snapped
pyramid : TilePyramid
zoom : int
Returns
-------
Bounds(left, bottom, right, top)
"""
if not isinstance(bounds, (tuple, list)):
raise TypeError("bounds must be either a tuple or a list")
if len(bounds) != 4:
raise ValueError("bounds has to have exactly four values")
if not isinstance(pyramid, BufferedTilePyramid):
raise TypeError("pyramid has to be a BufferedTilePyramid")
bounds = Bounds(*bounds)
lb = pyramid.tile_from_xy(bounds.left, bounds.bottom, zoom, on_edge_use="rt").bounds
rt = pyramid.tile_from_xy(bounds.right, bounds.top, zoom, on_edge_use="lb").bounds
return Bounds(lb.left, lb.bottom, rt.right, rt.top) | [
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L628-L652 | [
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valid | clip_bounds | Clips bounds by clip.
Parameters
----------
bounds : bounds to be clipped
clip : clip bounds
Returns
-------
Bounds(left, bottom, right, top) | mapchete/config.py | def clip_bounds(bounds=None, clip=None):
"""
Clips bounds by clip.
Parameters
----------
bounds : bounds to be clipped
clip : clip bounds
Returns
-------
Bounds(left, bottom, right, top)
"""
bounds = Bounds(*bounds)
clip = Bounds(*clip)
return Bounds(
max(bounds.left, clip.left),
max(bounds.bottom, clip.bottom),
min(bounds.right, clip.right),
min(bounds.top, clip.top)
) | def clip_bounds(bounds=None, clip=None):
"""
Clips bounds by clip.
Parameters
----------
bounds : bounds to be clipped
clip : clip bounds
Returns
-------
Bounds(left, bottom, right, top)
"""
bounds = Bounds(*bounds)
clip = Bounds(*clip)
return Bounds(
max(bounds.left, clip.left),
max(bounds.bottom, clip.bottom),
min(bounds.right, clip.right),
min(bounds.top, clip.top)
) | [
"Clips",
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"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L655-L675 | [
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valid | raw_conf_process_pyramid | Loads the process pyramid of a raw configuration.
Parameters
----------
raw_conf : dict
Raw mapchete configuration as dictionary.
Returns
-------
BufferedTilePyramid | mapchete/config.py | def raw_conf_process_pyramid(raw_conf):
"""
Loads the process pyramid of a raw configuration.
Parameters
----------
raw_conf : dict
Raw mapchete configuration as dictionary.
Returns
-------
BufferedTilePyramid
"""
return BufferedTilePyramid(
raw_conf["pyramid"]["grid"],
metatiling=raw_conf["pyramid"].get("metatiling", 1),
pixelbuffer=raw_conf["pyramid"].get("pixelbuffer", 0)
) | def raw_conf_process_pyramid(raw_conf):
"""
Loads the process pyramid of a raw configuration.
Parameters
----------
raw_conf : dict
Raw mapchete configuration as dictionary.
Returns
-------
BufferedTilePyramid
"""
return BufferedTilePyramid(
raw_conf["pyramid"]["grid"],
metatiling=raw_conf["pyramid"].get("metatiling", 1),
pixelbuffer=raw_conf["pyramid"].get("pixelbuffer", 0)
) | [
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valid | bounds_from_opts | Loads the process pyramid of a raw configuration.
Parameters
----------
raw_conf : dict
Raw mapchete configuration as dictionary.
Returns
-------
BufferedTilePyramid | mapchete/config.py | def bounds_from_opts(
wkt_geometry=None, point=None, bounds=None, zoom=None, raw_conf=None
):
"""
Loads the process pyramid of a raw configuration.
Parameters
----------
raw_conf : dict
Raw mapchete configuration as dictionary.
Returns
-------
BufferedTilePyramid
"""
if wkt_geometry:
return wkt.loads(wkt_geometry).bounds
elif point:
x, y = point
zoom_levels = get_zoom_levels(
process_zoom_levels=raw_conf["zoom_levels"],
init_zoom_levels=zoom
)
tp = raw_conf_process_pyramid(raw_conf)
return tp.tile_from_xy(x, y, max(zoom_levels)).bounds
else:
return bounds | def bounds_from_opts(
wkt_geometry=None, point=None, bounds=None, zoom=None, raw_conf=None
):
"""
Loads the process pyramid of a raw configuration.
Parameters
----------
raw_conf : dict
Raw mapchete configuration as dictionary.
Returns
-------
BufferedTilePyramid
"""
if wkt_geometry:
return wkt.loads(wkt_geometry).bounds
elif point:
x, y = point
zoom_levels = get_zoom_levels(
process_zoom_levels=raw_conf["zoom_levels"],
init_zoom_levels=zoom
)
tp = raw_conf_process_pyramid(raw_conf)
return tp.tile_from_xy(x, y, max(zoom_levels)).bounds
else:
return bounds | [
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valid | _validate_zooms | Return a list of zoom levels.
Following inputs are converted:
- int --> [int]
- dict{min, max} --> range(min, max + 1)
- [int] --> [int]
- [int, int] --> range(smaller int, bigger int + 1) | mapchete/config.py | def _validate_zooms(zooms):
"""
Return a list of zoom levels.
Following inputs are converted:
- int --> [int]
- dict{min, max} --> range(min, max + 1)
- [int] --> [int]
- [int, int] --> range(smaller int, bigger int + 1)
"""
if isinstance(zooms, dict):
if any([a not in zooms for a in ["min", "max"]]):
raise MapcheteConfigError("min and max zoom required")
zmin = _validate_zoom(zooms["min"])
zmax = _validate_zoom(zooms["max"])
if zmin > zmax:
raise MapcheteConfigError(
"max zoom must not be smaller than min zoom")
return list(range(zmin, zmax + 1))
elif isinstance(zooms, list):
if len(zooms) == 1:
return zooms
elif len(zooms) == 2:
zmin, zmax = sorted([_validate_zoom(z) for z in zooms])
return list(range(zmin, zmax + 1))
else:
return zooms
else:
return [_validate_zoom(zooms)] | def _validate_zooms(zooms):
"""
Return a list of zoom levels.
Following inputs are converted:
- int --> [int]
- dict{min, max} --> range(min, max + 1)
- [int] --> [int]
- [int, int] --> range(smaller int, bigger int + 1)
"""
if isinstance(zooms, dict):
if any([a not in zooms for a in ["min", "max"]]):
raise MapcheteConfigError("min and max zoom required")
zmin = _validate_zoom(zooms["min"])
zmax = _validate_zoom(zooms["max"])
if zmin > zmax:
raise MapcheteConfigError(
"max zoom must not be smaller than min zoom")
return list(range(zmin, zmax + 1))
elif isinstance(zooms, list):
if len(zooms) == 1:
return zooms
elif len(zooms) == 2:
zmin, zmax = sorted([_validate_zoom(z) for z in zooms])
return list(range(zmin, zmax + 1))
else:
return zooms
else:
return [_validate_zoom(zooms)] | [
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"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L785-L813 | [
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valid | _raw_at_zoom | Return parameter dictionary per zoom level. | mapchete/config.py | def _raw_at_zoom(config, zooms):
"""Return parameter dictionary per zoom level."""
params_per_zoom = {}
for zoom in zooms:
params = {}
for name, element in config.items():
if name not in _RESERVED_PARAMETERS:
out_element = _element_at_zoom(name, element, zoom)
if out_element is not None:
params[name] = out_element
params_per_zoom[zoom] = params
return params_per_zoom | def _raw_at_zoom(config, zooms):
"""Return parameter dictionary per zoom level."""
params_per_zoom = {}
for zoom in zooms:
params = {}
for name, element in config.items():
if name not in _RESERVED_PARAMETERS:
out_element = _element_at_zoom(name, element, zoom)
if out_element is not None:
params[name] = out_element
params_per_zoom[zoom] = params
return params_per_zoom | [
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"dictionary",
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"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L833-L844 | [
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valid | _element_at_zoom | Return the element filtered by zoom level.
- An input integer or float gets returned as is.
- An input string is checked whether it starts with "zoom". Then, the
provided zoom level gets parsed and compared with the actual zoom
level. If zoom levels match, the element gets returned.
TODOs/gotchas:
- Elements are unordered, which can lead to unexpected results when
defining the YAML config.
- Provided zoom levels for one element in config file are not allowed
to "overlap", i.e. there is not yet a decision mechanism implemented
which handles this case. | mapchete/config.py | def _element_at_zoom(name, element, zoom):
"""
Return the element filtered by zoom level.
- An input integer or float gets returned as is.
- An input string is checked whether it starts with "zoom". Then, the
provided zoom level gets parsed and compared with the actual zoom
level. If zoom levels match, the element gets returned.
TODOs/gotchas:
- Elements are unordered, which can lead to unexpected results when
defining the YAML config.
- Provided zoom levels for one element in config file are not allowed
to "overlap", i.e. there is not yet a decision mechanism implemented
which handles this case.
"""
# If element is a dictionary, analyze subitems.
if isinstance(element, dict):
if "format" in element:
# we have an input or output driver here
return element
out_elements = {}
for sub_name, sub_element in element.items():
out_element = _element_at_zoom(sub_name, sub_element, zoom)
if name == "input":
out_elements[sub_name] = out_element
elif out_element is not None:
out_elements[sub_name] = out_element
# If there is only one subelement, collapse unless it is
# input. In such case, return a dictionary.
if len(out_elements) == 1 and name != "input":
return next(iter(out_elements.values()))
# If subelement is empty, return None
if len(out_elements) == 0:
return None
return out_elements
# If element is a zoom level statement, filter element.
elif isinstance(name, str):
if name.startswith("zoom"):
return _filter_by_zoom(
conf_string=name.strip("zoom").strip(), zoom=zoom,
element=element)
# If element is a string but not a zoom level statement, return
# element.
else:
return element
# Return all other types as they are.
else:
return element | def _element_at_zoom(name, element, zoom):
"""
Return the element filtered by zoom level.
- An input integer or float gets returned as is.
- An input string is checked whether it starts with "zoom". Then, the
provided zoom level gets parsed and compared with the actual zoom
level. If zoom levels match, the element gets returned.
TODOs/gotchas:
- Elements are unordered, which can lead to unexpected results when
defining the YAML config.
- Provided zoom levels for one element in config file are not allowed
to "overlap", i.e. there is not yet a decision mechanism implemented
which handles this case.
"""
# If element is a dictionary, analyze subitems.
if isinstance(element, dict):
if "format" in element:
# we have an input or output driver here
return element
out_elements = {}
for sub_name, sub_element in element.items():
out_element = _element_at_zoom(sub_name, sub_element, zoom)
if name == "input":
out_elements[sub_name] = out_element
elif out_element is not None:
out_elements[sub_name] = out_element
# If there is only one subelement, collapse unless it is
# input. In such case, return a dictionary.
if len(out_elements) == 1 and name != "input":
return next(iter(out_elements.values()))
# If subelement is empty, return None
if len(out_elements) == 0:
return None
return out_elements
# If element is a zoom level statement, filter element.
elif isinstance(name, str):
if name.startswith("zoom"):
return _filter_by_zoom(
conf_string=name.strip("zoom").strip(), zoom=zoom,
element=element)
# If element is a string but not a zoom level statement, return
# element.
else:
return element
# Return all other types as they are.
else:
return element | [
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valid | _filter_by_zoom | Return element only if zoom condition matches with config string. | mapchete/config.py | def _filter_by_zoom(element=None, conf_string=None, zoom=None):
"""Return element only if zoom condition matches with config string."""
for op_str, op_func in [
# order of operators is important:
# prematurely return in cases of "<=" or ">=", otherwise
# _strip_zoom() cannot parse config strings starting with "<"
# or ">"
("=", operator.eq),
("<=", operator.le),
(">=", operator.ge),
("<", operator.lt),
(">", operator.gt),
]:
if conf_string.startswith(op_str):
return element if op_func(zoom, _strip_zoom(conf_string, op_str)) else None | def _filter_by_zoom(element=None, conf_string=None, zoom=None):
"""Return element only if zoom condition matches with config string."""
for op_str, op_func in [
# order of operators is important:
# prematurely return in cases of "<=" or ">=", otherwise
# _strip_zoom() cannot parse config strings starting with "<"
# or ">"
("=", operator.eq),
("<=", operator.le),
(">=", operator.ge),
("<", operator.lt),
(">", operator.gt),
]:
if conf_string.startswith(op_str):
return element if op_func(zoom, _strip_zoom(conf_string, op_str)) else None | [
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valid | _strip_zoom | Return zoom level as integer or throw error. | mapchete/config.py | def _strip_zoom(input_string, strip_string):
"""Return zoom level as integer or throw error."""
try:
return int(input_string.strip(strip_string))
except Exception as e:
raise MapcheteConfigError("zoom level could not be determined: %s" % e) | def _strip_zoom(input_string, strip_string):
"""Return zoom level as integer or throw error."""
try:
return int(input_string.strip(strip_string))
except Exception as e:
raise MapcheteConfigError("zoom level could not be determined: %s" % e) | [
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L914-L919 | [
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valid | _flatten_tree | Flatten dict tree into dictionary where keys are paths of old dict. | mapchete/config.py | def _flatten_tree(tree, old_path=None):
"""Flatten dict tree into dictionary where keys are paths of old dict."""
flat_tree = []
for key, value in tree.items():
new_path = "/".join([old_path, key]) if old_path else key
if isinstance(value, dict) and "format" not in value:
flat_tree.extend(_flatten_tree(value, old_path=new_path))
else:
flat_tree.append((new_path, value))
return flat_tree | def _flatten_tree(tree, old_path=None):
"""Flatten dict tree into dictionary where keys are paths of old dict."""
flat_tree = []
for key, value in tree.items():
new_path = "/".join([old_path, key]) if old_path else key
if isinstance(value, dict) and "format" not in value:
flat_tree.extend(_flatten_tree(value, old_path=new_path))
else:
flat_tree.append((new_path, value))
return flat_tree | [
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"are",
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L922-L931 | [
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valid | _unflatten_tree | Reverse tree flattening. | mapchete/config.py | def _unflatten_tree(flat):
"""Reverse tree flattening."""
tree = {}
for key, value in flat.items():
path = key.split("/")
# we are at the end of a branch
if len(path) == 1:
tree[key] = value
# there are more branches
else:
# create new dict
if not path[0] in tree:
tree[path[0]] = _unflatten_tree({"/".join(path[1:]): value})
# add keys to existing dict
else:
branch = _unflatten_tree({"/".join(path[1:]): value})
if not path[1] in tree[path[0]]:
tree[path[0]][path[1]] = branch[path[1]]
else:
tree[path[0]][path[1]].update(branch[path[1]])
return tree | def _unflatten_tree(flat):
"""Reverse tree flattening."""
tree = {}
for key, value in flat.items():
path = key.split("/")
# we are at the end of a branch
if len(path) == 1:
tree[key] = value
# there are more branches
else:
# create new dict
if not path[0] in tree:
tree[path[0]] = _unflatten_tree({"/".join(path[1:]): value})
# add keys to existing dict
else:
branch = _unflatten_tree({"/".join(path[1:]): value})
if not path[1] in tree[path[0]]:
tree[path[0]][path[1]] = branch[path[1]]
else:
tree[path[0]][path[1]].update(branch[path[1]])
return tree | [
"Reverse",
"tree",
"flattening",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L934-L954 | [
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valid | MapcheteConfig.bounds | Process bounds as defined in the configuration. | mapchete/config.py | def bounds(self):
"""Process bounds as defined in the configuration."""
if self._raw["bounds"] is None:
return self.process_pyramid.bounds
else:
return Bounds(*_validate_bounds(self._raw["bounds"])) | def bounds(self):
"""Process bounds as defined in the configuration."""
if self._raw["bounds"] is None:
return self.process_pyramid.bounds
else:
return Bounds(*_validate_bounds(self._raw["bounds"])) | [
"Process",
"bounds",
"as",
"defined",
"in",
"the",
"configuration",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L227-L232 | [
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valid | MapcheteConfig.init_bounds | Process bounds this process is currently initialized with.
This gets triggered by using the ``init_bounds`` kwarg. If not set, it will
be equal to self.bounds. | mapchete/config.py | def init_bounds(self):
"""
Process bounds this process is currently initialized with.
This gets triggered by using the ``init_bounds`` kwarg. If not set, it will
be equal to self.bounds.
"""
if self._raw["init_bounds"] is None:
return self.bounds
else:
return Bounds(*_validate_bounds(self._raw["init_bounds"])) | def init_bounds(self):
"""
Process bounds this process is currently initialized with.
This gets triggered by using the ``init_bounds`` kwarg. If not set, it will
be equal to self.bounds.
"""
if self._raw["init_bounds"] is None:
return self.bounds
else:
return Bounds(*_validate_bounds(self._raw["init_bounds"])) | [
"Process",
"bounds",
"this",
"process",
"is",
"currently",
"initialized",
"with",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L235-L245 | [
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valid | MapcheteConfig.effective_bounds | Effective process bounds required to initialize inputs.
Process bounds sometimes have to be larger, because all intersecting process
tiles have to be covered as well. | mapchete/config.py | def effective_bounds(self):
"""
Effective process bounds required to initialize inputs.
Process bounds sometimes have to be larger, because all intersecting process
tiles have to be covered as well.
"""
return snap_bounds(
bounds=clip_bounds(bounds=self.init_bounds, clip=self.process_pyramid.bounds),
pyramid=self.process_pyramid,
zoom=min(
self.baselevels["zooms"]
) if self.baselevels else min(
self.init_zoom_levels
)
) | def effective_bounds(self):
"""
Effective process bounds required to initialize inputs.
Process bounds sometimes have to be larger, because all intersecting process
tiles have to be covered as well.
"""
return snap_bounds(
bounds=clip_bounds(bounds=self.init_bounds, clip=self.process_pyramid.bounds),
pyramid=self.process_pyramid,
zoom=min(
self.baselevels["zooms"]
) if self.baselevels else min(
self.init_zoom_levels
)
) | [
"Effective",
"process",
"bounds",
"required",
"to",
"initialize",
"inputs",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L248-L263 | [
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valid | MapcheteConfig.output | Output object of driver. | mapchete/config.py | def output(self):
"""Output object of driver."""
output_params = dict(
self._raw["output"],
grid=self.output_pyramid.grid,
pixelbuffer=self.output_pyramid.pixelbuffer,
metatiling=self.output_pyramid.metatiling
)
if "path" in output_params:
output_params.update(
path=absolute_path(path=output_params["path"], base_dir=self.config_dir)
)
if "format" not in output_params:
raise MapcheteConfigError("output format not specified")
if output_params["format"] not in available_output_formats():
raise MapcheteConfigError(
"format %s not available in %s" % (
output_params["format"], str(available_output_formats())
)
)
writer = load_output_writer(output_params)
try:
writer.is_valid_with_config(output_params)
except Exception as e:
logger.exception(e)
raise MapcheteConfigError(
"driver %s not compatible with configuration: %s" % (
writer.METADATA["driver_name"], e
)
)
return writer | def output(self):
"""Output object of driver."""
output_params = dict(
self._raw["output"],
grid=self.output_pyramid.grid,
pixelbuffer=self.output_pyramid.pixelbuffer,
metatiling=self.output_pyramid.metatiling
)
if "path" in output_params:
output_params.update(
path=absolute_path(path=output_params["path"], base_dir=self.config_dir)
)
if "format" not in output_params:
raise MapcheteConfigError("output format not specified")
if output_params["format"] not in available_output_formats():
raise MapcheteConfigError(
"format %s not available in %s" % (
output_params["format"], str(available_output_formats())
)
)
writer = load_output_writer(output_params)
try:
writer.is_valid_with_config(output_params)
except Exception as e:
logger.exception(e)
raise MapcheteConfigError(
"driver %s not compatible with configuration: %s" % (
writer.METADATA["driver_name"], e
)
)
return writer | [
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valid | MapcheteConfig.input | Input items used for process stored in a dictionary.
Keys are the hashes of the input parameters, values the respective
InputData classes. | mapchete/config.py | def input(self):
"""
Input items used for process stored in a dictionary.
Keys are the hashes of the input parameters, values the respective
InputData classes.
"""
# the delimiters are used by some input drivers
delimiters = dict(
zoom=self.init_zoom_levels,
bounds=self.init_bounds,
process_bounds=self.bounds,
effective_bounds=self.effective_bounds
)
# get input items only of initialized zoom levels
raw_inputs = {
# convert input definition to hash
get_hash(v): v
for zoom in self.init_zoom_levels
if "input" in self._params_at_zoom[zoom]
# to preserve file groups, "flatten" the input tree and use
# the tree paths as keys
for key, v in _flatten_tree(self._params_at_zoom[zoom]["input"])
if v is not None
}
initalized_inputs = {}
for k, v in raw_inputs.items():
# for files and tile directories
if isinstance(v, str):
logger.debug("load input reader for simple input %s", v)
try:
reader = load_input_reader(
dict(
path=absolute_path(path=v, base_dir=self.config_dir),
pyramid=self.process_pyramid,
pixelbuffer=self.process_pyramid.pixelbuffer,
delimiters=delimiters
),
readonly=self.mode == "readonly")
except Exception as e:
logger.exception(e)
raise MapcheteDriverError("error when loading input %s: %s" % (v, e))
logger.debug("input reader for simple input %s is %s", v, reader)
# for abstract inputs
elif isinstance(v, dict):
logger.debug("load input reader for abstract input %s", v)
try:
reader = load_input_reader(
dict(
abstract=deepcopy(v),
pyramid=self.process_pyramid,
pixelbuffer=self.process_pyramid.pixelbuffer,
delimiters=delimiters,
conf_dir=self.config_dir
),
readonly=self.mode == "readonly")
except Exception as e:
logger.exception(e)
raise MapcheteDriverError("error when loading input %s: %s" % (v, e))
logger.debug("input reader for abstract input %s is %s", v, reader)
else:
raise MapcheteConfigError("invalid input type %s", type(v))
# trigger bbox creation
reader.bbox(out_crs=self.process_pyramid.crs)
initalized_inputs[k] = reader
return initalized_inputs | def input(self):
"""
Input items used for process stored in a dictionary.
Keys are the hashes of the input parameters, values the respective
InputData classes.
"""
# the delimiters are used by some input drivers
delimiters = dict(
zoom=self.init_zoom_levels,
bounds=self.init_bounds,
process_bounds=self.bounds,
effective_bounds=self.effective_bounds
)
# get input items only of initialized zoom levels
raw_inputs = {
# convert input definition to hash
get_hash(v): v
for zoom in self.init_zoom_levels
if "input" in self._params_at_zoom[zoom]
# to preserve file groups, "flatten" the input tree and use
# the tree paths as keys
for key, v in _flatten_tree(self._params_at_zoom[zoom]["input"])
if v is not None
}
initalized_inputs = {}
for k, v in raw_inputs.items():
# for files and tile directories
if isinstance(v, str):
logger.debug("load input reader for simple input %s", v)
try:
reader = load_input_reader(
dict(
path=absolute_path(path=v, base_dir=self.config_dir),
pyramid=self.process_pyramid,
pixelbuffer=self.process_pyramid.pixelbuffer,
delimiters=delimiters
),
readonly=self.mode == "readonly")
except Exception as e:
logger.exception(e)
raise MapcheteDriverError("error when loading input %s: %s" % (v, e))
logger.debug("input reader for simple input %s is %s", v, reader)
# for abstract inputs
elif isinstance(v, dict):
logger.debug("load input reader for abstract input %s", v)
try:
reader = load_input_reader(
dict(
abstract=deepcopy(v),
pyramid=self.process_pyramid,
pixelbuffer=self.process_pyramid.pixelbuffer,
delimiters=delimiters,
conf_dir=self.config_dir
),
readonly=self.mode == "readonly")
except Exception as e:
logger.exception(e)
raise MapcheteDriverError("error when loading input %s: %s" % (v, e))
logger.debug("input reader for abstract input %s is %s", v, reader)
else:
raise MapcheteConfigError("invalid input type %s", type(v))
# trigger bbox creation
reader.bbox(out_crs=self.process_pyramid.crs)
initalized_inputs[k] = reader
return initalized_inputs | [
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L301-L371 | [
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valid | MapcheteConfig.baselevels | Optional baselevels configuration.
baselevels:
min: <zoom>
max: <zoom>
lower: <resampling method>
higher: <resampling method> | mapchete/config.py | def baselevels(self):
"""
Optional baselevels configuration.
baselevels:
min: <zoom>
max: <zoom>
lower: <resampling method>
higher: <resampling method>
"""
if "baselevels" not in self._raw:
return {}
baselevels = self._raw["baselevels"]
minmax = {k: v for k, v in baselevels.items() if k in ["min", "max"]}
if not minmax:
raise MapcheteConfigError("no min and max values given for baselevels")
for v in minmax.values():
if not isinstance(v, int) or v < 0:
raise MapcheteConfigError(
"invalid baselevel zoom parameter given: %s" % minmax.values()
)
zooms = list(range(
minmax.get("min", min(self.zoom_levels)),
minmax.get("max", max(self.zoom_levels)) + 1)
)
if not set(self.zoom_levels).difference(set(zooms)):
raise MapcheteConfigError("baselevels zooms fully cover process zooms")
return dict(
zooms=zooms,
lower=baselevels.get("lower", "nearest"),
higher=baselevels.get("higher", "nearest"),
tile_pyramid=BufferedTilePyramid(
self.output_pyramid.grid,
pixelbuffer=self.output_pyramid.pixelbuffer,
metatiling=self.process_pyramid.metatiling
)
) | def baselevels(self):
"""
Optional baselevels configuration.
baselevels:
min: <zoom>
max: <zoom>
lower: <resampling method>
higher: <resampling method>
"""
if "baselevels" not in self._raw:
return {}
baselevels = self._raw["baselevels"]
minmax = {k: v for k, v in baselevels.items() if k in ["min", "max"]}
if not minmax:
raise MapcheteConfigError("no min and max values given for baselevels")
for v in minmax.values():
if not isinstance(v, int) or v < 0:
raise MapcheteConfigError(
"invalid baselevel zoom parameter given: %s" % minmax.values()
)
zooms = list(range(
minmax.get("min", min(self.zoom_levels)),
minmax.get("max", max(self.zoom_levels)) + 1)
)
if not set(self.zoom_levels).difference(set(zooms)):
raise MapcheteConfigError("baselevels zooms fully cover process zooms")
return dict(
zooms=zooms,
lower=baselevels.get("lower", "nearest"),
higher=baselevels.get("higher", "nearest"),
tile_pyramid=BufferedTilePyramid(
self.output_pyramid.grid,
pixelbuffer=self.output_pyramid.pixelbuffer,
metatiling=self.process_pyramid.metatiling
)
) | [
"Optional",
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"configuration",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L374-L414 | [
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valid | MapcheteConfig.params_at_zoom | Return configuration parameters snapshot for zoom as dictionary.
Parameters
----------
zoom : int
zoom level
Returns
-------
configuration snapshot : dictionary
zoom level dependent process configuration | mapchete/config.py | def params_at_zoom(self, zoom):
"""
Return configuration parameters snapshot for zoom as dictionary.
Parameters
----------
zoom : int
zoom level
Returns
-------
configuration snapshot : dictionary
zoom level dependent process configuration
"""
if zoom not in self.init_zoom_levels:
raise ValueError(
"zoom level not available with current configuration")
out = dict(self._params_at_zoom[zoom], input={}, output=self.output)
if "input" in self._params_at_zoom[zoom]:
flat_inputs = {}
for k, v in _flatten_tree(self._params_at_zoom[zoom]["input"]):
if v is None:
flat_inputs[k] = None
else:
flat_inputs[k] = self.input[get_hash(v)]
out["input"] = _unflatten_tree(flat_inputs)
else:
out["input"] = {}
return out | def params_at_zoom(self, zoom):
"""
Return configuration parameters snapshot for zoom as dictionary.
Parameters
----------
zoom : int
zoom level
Returns
-------
configuration snapshot : dictionary
zoom level dependent process configuration
"""
if zoom not in self.init_zoom_levels:
raise ValueError(
"zoom level not available with current configuration")
out = dict(self._params_at_zoom[zoom], input={}, output=self.output)
if "input" in self._params_at_zoom[zoom]:
flat_inputs = {}
for k, v in _flatten_tree(self._params_at_zoom[zoom]["input"]):
if v is None:
flat_inputs[k] = None
else:
flat_inputs[k] = self.input[get_hash(v)]
out["input"] = _unflatten_tree(flat_inputs)
else:
out["input"] = {}
return out | [
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"configuration",
"parameters",
"snapshot",
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"as",
"dictionary",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L433-L461 | [
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valid | MapcheteConfig.area_at_zoom | Return process bounding box for zoom level.
Parameters
----------
zoom : int or None
if None, the union of all zoom level areas is returned
Returns
-------
process area : shapely geometry | mapchete/config.py | def area_at_zoom(self, zoom=None):
"""
Return process bounding box for zoom level.
Parameters
----------
zoom : int or None
if None, the union of all zoom level areas is returned
Returns
-------
process area : shapely geometry
"""
if zoom is None:
if not self._cache_full_process_area:
logger.debug("calculate process area ...")
self._cache_full_process_area = cascaded_union([
self._area_at_zoom(z) for z in self.init_zoom_levels]
).buffer(0)
return self._cache_full_process_area
else:
if zoom not in self.init_zoom_levels:
raise ValueError(
"zoom level not available with current configuration")
return self._area_at_zoom(zoom) | def area_at_zoom(self, zoom=None):
"""
Return process bounding box for zoom level.
Parameters
----------
zoom : int or None
if None, the union of all zoom level areas is returned
Returns
-------
process area : shapely geometry
"""
if zoom is None:
if not self._cache_full_process_area:
logger.debug("calculate process area ...")
self._cache_full_process_area = cascaded_union([
self._area_at_zoom(z) for z in self.init_zoom_levels]
).buffer(0)
return self._cache_full_process_area
else:
if zoom not in self.init_zoom_levels:
raise ValueError(
"zoom level not available with current configuration")
return self._area_at_zoom(zoom) | [
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valid | MapcheteConfig.bounds_at_zoom | Return process bounds for zoom level.
Parameters
----------
zoom : integer or list
Returns
-------
process bounds : tuple
left, bottom, right, top | mapchete/config.py | def bounds_at_zoom(self, zoom=None):
"""
Return process bounds for zoom level.
Parameters
----------
zoom : integer or list
Returns
-------
process bounds : tuple
left, bottom, right, top
"""
return () if self.area_at_zoom(zoom).is_empty else Bounds(
*self.area_at_zoom(zoom).bounds) | def bounds_at_zoom(self, zoom=None):
"""
Return process bounds for zoom level.
Parameters
----------
zoom : integer or list
Returns
-------
process bounds : tuple
left, bottom, right, top
"""
return () if self.area_at_zoom(zoom).is_empty else Bounds(
*self.area_at_zoom(zoom).bounds) | [
"Return",
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L507-L521 | [
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valid | MapcheteConfig.process_file | Deprecated. | mapchete/config.py | def process_file(self):
"""Deprecated."""
warnings.warn(DeprecationWarning("'self.process_file' is deprecated"))
return os.path.join(self._raw["config_dir"], self._raw["process"]) | def process_file(self):
"""Deprecated."""
warnings.warn(DeprecationWarning("'self.process_file' is deprecated"))
return os.path.join(self._raw["config_dir"], self._raw["process"]) | [
"Deprecated",
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/config.py#L557-L560 | [
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valid | zoom_index_gen | Generate indexes for given zoom level.
Parameters
----------
mp : Mapchete object
process output to be indexed
out_dir : path
optionally override process output directory
zoom : int
zoom level to be processed
geojson : bool
generate GeoJSON index (default: False)
gpkg : bool
generate GeoPackage index (default: False)
shapefile : bool
generate Shapefile index (default: False)
txt : bool
generate tile path list textfile (default: False)
vrt : bool
GDAL-style VRT file (default: False)
fieldname : str
field name which contains paths of tiles (default: "location")
basepath : str
if set, use custom base path instead of output path
for_gdal : bool
use GDAL compatible remote paths, i.e. add "/vsicurl/" before path
(default: True) | mapchete/index.py | def zoom_index_gen(
mp=None,
out_dir=None,
zoom=None,
geojson=False,
gpkg=False,
shapefile=False,
txt=False,
vrt=False,
fieldname="location",
basepath=None,
for_gdal=True,
threading=False,
):
"""
Generate indexes for given zoom level.
Parameters
----------
mp : Mapchete object
process output to be indexed
out_dir : path
optionally override process output directory
zoom : int
zoom level to be processed
geojson : bool
generate GeoJSON index (default: False)
gpkg : bool
generate GeoPackage index (default: False)
shapefile : bool
generate Shapefile index (default: False)
txt : bool
generate tile path list textfile (default: False)
vrt : bool
GDAL-style VRT file (default: False)
fieldname : str
field name which contains paths of tiles (default: "location")
basepath : str
if set, use custom base path instead of output path
for_gdal : bool
use GDAL compatible remote paths, i.e. add "/vsicurl/" before path
(default: True)
"""
for zoom in get_zoom_levels(process_zoom_levels=zoom):
with ExitStack() as es:
# get index writers for all enabled formats
index_writers = []
if geojson:
index_writers.append(
es.enter_context(
VectorFileWriter(
driver="GeoJSON",
out_path=_index_file_path(out_dir, zoom, "geojson"),
crs=mp.config.output_pyramid.crs,
fieldname=fieldname
)
)
)
if gpkg:
index_writers.append(
es.enter_context(
VectorFileWriter(
driver="GPKG",
out_path=_index_file_path(out_dir, zoom, "gpkg"),
crs=mp.config.output_pyramid.crs,
fieldname=fieldname
)
)
)
if shapefile:
index_writers.append(
es.enter_context(
VectorFileWriter(
driver="ESRI Shapefile",
out_path=_index_file_path(out_dir, zoom, "shp"),
crs=mp.config.output_pyramid.crs,
fieldname=fieldname
)
)
)
if txt:
index_writers.append(
es.enter_context(
TextFileWriter(out_path=_index_file_path(out_dir, zoom, "txt"))
)
)
if vrt:
index_writers.append(
es.enter_context(
VRTFileWriter(
out_path=_index_file_path(out_dir, zoom, "vrt"),
output=mp.config.output,
out_pyramid=mp.config.output_pyramid
)
)
)
logger.debug("use the following index writers: %s", index_writers)
def _worker(tile):
# if there are indexes to write to, check if output exists
tile_path = _tile_path(
orig_path=mp.config.output.get_path(tile),
basepath=basepath,
for_gdal=for_gdal
)
indexes = [
i for i in index_writers
if not i.entry_exists(tile=tile, path=tile_path)
]
if indexes:
output_exists = mp.config.output.tiles_exist(output_tile=tile)
else:
output_exists = None
return tile, tile_path, indexes, output_exists
with concurrent.futures.ThreadPoolExecutor() as executor:
for task in concurrent.futures.as_completed(
(
executor.submit(_worker, i)
for i in mp.config.output_pyramid.tiles_from_geom(
mp.config.area_at_zoom(zoom), zoom
)
)
):
tile, tile_path, indexes, output_exists = task.result()
# only write entries if there are indexes to write to and output
# exists
if indexes and output_exists:
logger.debug("%s exists", tile_path)
logger.debug("write to %s indexes" % len(indexes))
for index in indexes:
index.write(tile, tile_path)
# yield tile for progress information
yield tile | def zoom_index_gen(
mp=None,
out_dir=None,
zoom=None,
geojson=False,
gpkg=False,
shapefile=False,
txt=False,
vrt=False,
fieldname="location",
basepath=None,
for_gdal=True,
threading=False,
):
"""
Generate indexes for given zoom level.
Parameters
----------
mp : Mapchete object
process output to be indexed
out_dir : path
optionally override process output directory
zoom : int
zoom level to be processed
geojson : bool
generate GeoJSON index (default: False)
gpkg : bool
generate GeoPackage index (default: False)
shapefile : bool
generate Shapefile index (default: False)
txt : bool
generate tile path list textfile (default: False)
vrt : bool
GDAL-style VRT file (default: False)
fieldname : str
field name which contains paths of tiles (default: "location")
basepath : str
if set, use custom base path instead of output path
for_gdal : bool
use GDAL compatible remote paths, i.e. add "/vsicurl/" before path
(default: True)
"""
for zoom in get_zoom_levels(process_zoom_levels=zoom):
with ExitStack() as es:
# get index writers for all enabled formats
index_writers = []
if geojson:
index_writers.append(
es.enter_context(
VectorFileWriter(
driver="GeoJSON",
out_path=_index_file_path(out_dir, zoom, "geojson"),
crs=mp.config.output_pyramid.crs,
fieldname=fieldname
)
)
)
if gpkg:
index_writers.append(
es.enter_context(
VectorFileWriter(
driver="GPKG",
out_path=_index_file_path(out_dir, zoom, "gpkg"),
crs=mp.config.output_pyramid.crs,
fieldname=fieldname
)
)
)
if shapefile:
index_writers.append(
es.enter_context(
VectorFileWriter(
driver="ESRI Shapefile",
out_path=_index_file_path(out_dir, zoom, "shp"),
crs=mp.config.output_pyramid.crs,
fieldname=fieldname
)
)
)
if txt:
index_writers.append(
es.enter_context(
TextFileWriter(out_path=_index_file_path(out_dir, zoom, "txt"))
)
)
if vrt:
index_writers.append(
es.enter_context(
VRTFileWriter(
out_path=_index_file_path(out_dir, zoom, "vrt"),
output=mp.config.output,
out_pyramid=mp.config.output_pyramid
)
)
)
logger.debug("use the following index writers: %s", index_writers)
def _worker(tile):
# if there are indexes to write to, check if output exists
tile_path = _tile_path(
orig_path=mp.config.output.get_path(tile),
basepath=basepath,
for_gdal=for_gdal
)
indexes = [
i for i in index_writers
if not i.entry_exists(tile=tile, path=tile_path)
]
if indexes:
output_exists = mp.config.output.tiles_exist(output_tile=tile)
else:
output_exists = None
return tile, tile_path, indexes, output_exists
with concurrent.futures.ThreadPoolExecutor() as executor:
for task in concurrent.futures.as_completed(
(
executor.submit(_worker, i)
for i in mp.config.output_pyramid.tiles_from_geom(
mp.config.area_at_zoom(zoom), zoom
)
)
):
tile, tile_path, indexes, output_exists = task.result()
# only write entries if there are indexes to write to and output
# exists
if indexes and output_exists:
logger.debug("%s exists", tile_path)
logger.debug("write to %s indexes" % len(indexes))
for index in indexes:
index.write(tile, tile_path)
# yield tile for progress information
yield tile | [
"Generate",
"indexes",
"for",
"given",
"zoom",
"level",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/index.py#L51-L185 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | get_segmentize_value | Return the recommended segmentation value in input file units.
It is calculated by multiplyling raster pixel size with tile shape in
pixels.
Parameters
----------
input_file : str
location of a file readable by rasterio
tile_pyramied : ``TilePyramid`` or ``BufferedTilePyramid``
tile pyramid to estimate target tile size
Returns
-------
segmenize value : float
length suggested of line segmentation to reproject file bounds | mapchete/formats/default/raster_file.py | def get_segmentize_value(input_file=None, tile_pyramid=None):
"""
Return the recommended segmentation value in input file units.
It is calculated by multiplyling raster pixel size with tile shape in
pixels.
Parameters
----------
input_file : str
location of a file readable by rasterio
tile_pyramied : ``TilePyramid`` or ``BufferedTilePyramid``
tile pyramid to estimate target tile size
Returns
-------
segmenize value : float
length suggested of line segmentation to reproject file bounds
"""
warnings.warn(DeprecationWarning("get_segmentize_value() has moved to mapchete.io"))
return io.get_segmentize_value(input_file, tile_pyramid) | def get_segmentize_value(input_file=None, tile_pyramid=None):
"""
Return the recommended segmentation value in input file units.
It is calculated by multiplyling raster pixel size with tile shape in
pixels.
Parameters
----------
input_file : str
location of a file readable by rasterio
tile_pyramied : ``TilePyramid`` or ``BufferedTilePyramid``
tile pyramid to estimate target tile size
Returns
-------
segmenize value : float
length suggested of line segmentation to reproject file bounds
"""
warnings.warn(DeprecationWarning("get_segmentize_value() has moved to mapchete.io"))
return io.get_segmentize_value(input_file, tile_pyramid) | [
"Return",
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"file",
"units",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/raster_file.py#L204-L224 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | InputData.profile | Return raster metadata. | mapchete/formats/default/raster_file.py | def profile(self):
"""Return raster metadata."""
with rasterio.open(self.path, "r") as src:
return deepcopy(src.meta) | def profile(self):
"""Return raster metadata."""
with rasterio.open(self.path, "r") as src:
return deepcopy(src.meta) | [
"Return",
"raster",
"metadata",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/raster_file.py#L70-L73 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | InputData.bbox | Return data bounding box.
Parameters
----------
out_crs : ``rasterio.crs.CRS``
rasterio CRS object (default: CRS of process pyramid)
Returns
-------
bounding box : geometry
Shapely geometry object | mapchete/formats/default/raster_file.py | def bbox(self, out_crs=None):
"""
Return data bounding box.
Parameters
----------
out_crs : ``rasterio.crs.CRS``
rasterio CRS object (default: CRS of process pyramid)
Returns
-------
bounding box : geometry
Shapely geometry object
"""
out_crs = self.pyramid.crs if out_crs is None else out_crs
with rasterio.open(self.path) as inp:
inp_crs = inp.crs
out_bbox = bbox = box(*inp.bounds)
# If soucre and target CRSes differ, segmentize and reproject
if inp_crs != out_crs:
# estimate segmentize value (raster pixel size * tile size)
# and get reprojected bounding box
return reproject_geometry(
segmentize_geometry(
bbox, inp.transform[0] * self.pyramid.tile_size
),
src_crs=inp_crs, dst_crs=out_crs
)
else:
return out_bbox | def bbox(self, out_crs=None):
"""
Return data bounding box.
Parameters
----------
out_crs : ``rasterio.crs.CRS``
rasterio CRS object (default: CRS of process pyramid)
Returns
-------
bounding box : geometry
Shapely geometry object
"""
out_crs = self.pyramid.crs if out_crs is None else out_crs
with rasterio.open(self.path) as inp:
inp_crs = inp.crs
out_bbox = bbox = box(*inp.bounds)
# If soucre and target CRSes differ, segmentize and reproject
if inp_crs != out_crs:
# estimate segmentize value (raster pixel size * tile size)
# and get reprojected bounding box
return reproject_geometry(
segmentize_geometry(
bbox, inp.transform[0] * self.pyramid.tile_size
),
src_crs=inp_crs, dst_crs=out_crs
)
else:
return out_bbox | [
"Return",
"data",
"bounding",
"box",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/raster_file.py#L90-L119 | [
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valid | InputTile.read | Read reprojected & resampled input data.
Returns
-------
data : array | mapchete/formats/default/raster_file.py | def read(self, indexes=None, **kwargs):
"""
Read reprojected & resampled input data.
Returns
-------
data : array
"""
return read_raster_window(
self.raster_file.path,
self.tile,
indexes=self._get_band_indexes(indexes),
resampling=self.resampling,
gdal_opts=self.gdal_opts
) | def read(self, indexes=None, **kwargs):
"""
Read reprojected & resampled input data.
Returns
-------
data : array
"""
return read_raster_window(
self.raster_file.path,
self.tile,
indexes=self._get_band_indexes(indexes),
resampling=self.resampling,
gdal_opts=self.gdal_opts
) | [
"Read",
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"input",
"data",
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/raster_file.py#L164-L178 | [
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valid | InputTile.is_empty | Check if there is data within this tile.
Returns
-------
is empty : bool | mapchete/formats/default/raster_file.py | def is_empty(self, indexes=None):
"""
Check if there is data within this tile.
Returns
-------
is empty : bool
"""
# empty if tile does not intersect with file bounding box
return not self.tile.bbox.intersects(
self.raster_file.bbox(out_crs=self.tile.crs)
) | def is_empty(self, indexes=None):
"""
Check if there is data within this tile.
Returns
-------
is empty : bool
"""
# empty if tile does not intersect with file bounding box
return not self.tile.bbox.intersects(
self.raster_file.bbox(out_crs=self.tile.crs)
) | [
"Check",
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/raster_file.py#L180-L191 | [
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valid | InputTile._get_band_indexes | Return valid band indexes. | mapchete/formats/default/raster_file.py | def _get_band_indexes(self, indexes=None):
"""Return valid band indexes."""
if indexes:
if isinstance(indexes, list):
return indexes
else:
return [indexes]
else:
return range(1, self.raster_file.profile["count"] + 1) | def _get_band_indexes(self, indexes=None):
"""Return valid band indexes."""
if indexes:
if isinstance(indexes, list):
return indexes
else:
return [indexes]
else:
return range(1, self.raster_file.profile["count"] + 1) | [
"Return",
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valid | execute | Example process for testing.
Inputs:
-------
file1
raster file
Parameters:
-----------
Output:
-------
np.ndarray | mapchete/processes/examples/example_process.py | def execute(mp):
"""
Example process for testing.
Inputs:
-------
file1
raster file
Parameters:
-----------
Output:
-------
np.ndarray
"""
# Reading and writing data works like this:
with mp.open("file1", resampling="bilinear") as raster_file:
if raster_file.is_empty():
return "empty"
# This assures a transparent tile instead of a pink error tile
# is returned when using mapchete serve.
dem = raster_file.read()
return dem | def execute(mp):
"""
Example process for testing.
Inputs:
-------
file1
raster file
Parameters:
-----------
Output:
-------
np.ndarray
"""
# Reading and writing data works like this:
with mp.open("file1", resampling="bilinear") as raster_file:
if raster_file.is_empty():
return "empty"
# This assures a transparent tile instead of a pink error tile
# is returned when using mapchete serve.
dem = raster_file.read()
return dem | [
"Example",
"process",
"for",
"testing",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/processes/examples/example_process.py#L4-L27 | [
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valid | OutputData.read | Read existing process output.
Parameters
----------
output_tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
process output : list | mapchete/formats/default/geojson.py | def read(self, output_tile, **kwargs):
"""
Read existing process output.
Parameters
----------
output_tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
process output : list
"""
path = self.get_path(output_tile)
try:
with fiona.open(path, "r") as src:
return list(src)
except DriverError as e:
for i in ("does not exist in the file system", "No such file or directory"):
if i in str(e):
return self.empty(output_tile)
else:
raise | def read(self, output_tile, **kwargs):
"""
Read existing process output.
Parameters
----------
output_tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
process output : list
"""
path = self.get_path(output_tile)
try:
with fiona.open(path, "r") as src:
return list(src)
except DriverError as e:
for i in ("does not exist in the file system", "No such file or directory"):
if i in str(e):
return self.empty(output_tile)
else:
raise | [
"Read",
"existing",
"process",
"output",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/geojson.py#L84-L106 | [
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valid | OutputData.write | Write data from process tiles into GeoJSON file(s).
Parameters
----------
process_tile : ``BufferedTile``
must be member of process ``TilePyramid`` | mapchete/formats/default/geojson.py | def write(self, process_tile, data):
"""
Write data from process tiles into GeoJSON file(s).
Parameters
----------
process_tile : ``BufferedTile``
must be member of process ``TilePyramid``
"""
if data is None or len(data) == 0:
return
if not isinstance(data, (list, types.GeneratorType)):
raise TypeError(
"GeoJSON driver data has to be a list or generator of GeoJSON objects"
)
data = list(data)
if not len(data):
logger.debug("no features to write")
else:
# in case of S3 output, create an boto3 resource
bucket_resource = get_boto3_bucket(self._bucket) if self._bucket else None
# Convert from process_tile to output_tiles
for tile in self.pyramid.intersecting(process_tile):
out_path = self.get_path(tile)
self.prepare_path(tile)
out_tile = BufferedTile(tile, self.pixelbuffer)
write_vector_window(
in_data=data,
out_schema=self.output_params["schema"],
out_tile=out_tile,
out_path=out_path,
bucket_resource=bucket_resource
) | def write(self, process_tile, data):
"""
Write data from process tiles into GeoJSON file(s).
Parameters
----------
process_tile : ``BufferedTile``
must be member of process ``TilePyramid``
"""
if data is None or len(data) == 0:
return
if not isinstance(data, (list, types.GeneratorType)):
raise TypeError(
"GeoJSON driver data has to be a list or generator of GeoJSON objects"
)
data = list(data)
if not len(data):
logger.debug("no features to write")
else:
# in case of S3 output, create an boto3 resource
bucket_resource = get_boto3_bucket(self._bucket) if self._bucket else None
# Convert from process_tile to output_tiles
for tile in self.pyramid.intersecting(process_tile):
out_path = self.get_path(tile)
self.prepare_path(tile)
out_tile = BufferedTile(tile, self.pixelbuffer)
write_vector_window(
in_data=data,
out_schema=self.output_params["schema"],
out_tile=out_tile,
out_path=out_path,
bucket_resource=bucket_resource
) | [
"Write",
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")",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/geojson.py#L108-L143 | [
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valid | OutputData.is_valid_with_config | Check if output format is valid with other process parameters.
Parameters
----------
config : dictionary
output configuration parameters
Returns
-------
is_valid : bool | mapchete/formats/default/geojson.py | def is_valid_with_config(self, config):
"""
Check if output format is valid with other process parameters.
Parameters
----------
config : dictionary
output configuration parameters
Returns
-------
is_valid : bool
"""
validate_values(config, [("schema", dict), ("path", str)])
validate_values(config["schema"], [("properties", dict), ("geometry", str)])
if config["schema"]["geometry"] not in [
"Geometry", "Point", "MultiPoint", "Line", "MultiLine",
"Polygon", "MultiPolygon"
]:
raise TypeError("invalid geometry type")
return True | def is_valid_with_config(self, config):
"""
Check if output format is valid with other process parameters.
Parameters
----------
config : dictionary
output configuration parameters
Returns
-------
is_valid : bool
"""
validate_values(config, [("schema", dict), ("path", str)])
validate_values(config["schema"], [("properties", dict), ("geometry", str)])
if config["schema"]["geometry"] not in [
"Geometry", "Point", "MultiPoint", "Line", "MultiLine",
"Polygon", "MultiPolygon"
]:
raise TypeError("invalid geometry type")
return True | [
"Check",
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"output",
"format",
"is",
"valid",
"with",
"other",
"process",
"parameters",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/geojson.py#L145-L165 | [
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valid | InputTile.read | Read data from process output.
Parameters
----------
validity_check : bool
run geometry validity check (default: True)
no_neighbors : bool
don't include neighbor tiles if there is a pixelbuffer (default:
False)
Returns
-------
features : list
GeoJSON-like list of features | mapchete/formats/default/geojson.py | def read(self, validity_check=True, no_neighbors=False, **kwargs):
"""
Read data from process output.
Parameters
----------
validity_check : bool
run geometry validity check (default: True)
no_neighbors : bool
don't include neighbor tiles if there is a pixelbuffer (default:
False)
Returns
-------
features : list
GeoJSON-like list of features
"""
if no_neighbors:
raise NotImplementedError()
return self._from_cache(validity_check=validity_check) | def read(self, validity_check=True, no_neighbors=False, **kwargs):
"""
Read data from process output.
Parameters
----------
validity_check : bool
run geometry validity check (default: True)
no_neighbors : bool
don't include neighbor tiles if there is a pixelbuffer (default:
False)
Returns
-------
features : list
GeoJSON-like list of features
"""
if no_neighbors:
raise NotImplementedError()
return self._from_cache(validity_check=validity_check) | [
"Read",
"data",
"from",
"process",
"output",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/geojson.py#L229-L248 | [
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valid | execute | Execute a Mapchete process. | mapchete/cli/default/execute.py | def execute(
mapchete_files,
zoom=None,
bounds=None,
point=None,
wkt_geometry=None,
tile=None,
overwrite=False,
multi=None,
input_file=None,
logfile=None,
verbose=False,
no_pbar=False,
debug=False,
max_chunksize=None,
vrt=False,
idx_out_dir=None
):
"""Execute a Mapchete process."""
multi = multi if multi else cpu_count()
mode = "overwrite" if overwrite else "continue"
# send verbose messages to /dev/null if not activated
if debug or not verbose:
verbose_dst = open(os.devnull, 'w')
else:
verbose_dst = sys.stdout
for mapchete_file in mapchete_files:
tqdm.tqdm.write("preparing to process %s" % mapchete_file, file=verbose_dst)
with click_spinner.spinner(disable=debug) as spinner:
# process single tile
if tile:
tile = raw_conf_process_pyramid(raw_conf(mapchete_file)).tile(*tile)
with mapchete.open(
mapchete_file,
mode=mode,
bounds=tile.bounds,
zoom=tile.zoom,
single_input_file=input_file
) as mp:
spinner.stop()
tqdm.tqdm.write("processing 1 tile", file=verbose_dst)
# run process on tile
for result in mp.batch_processor(tile=tile):
utils.write_verbose_msg(result, dst=verbose_dst)
tqdm.tqdm.write(
"processing %s finished" % mapchete_file, file=verbose_dst
)
# write VRT index
if vrt:
tqdm.tqdm.write("creating VRT", file=verbose_dst)
for tile in tqdm.tqdm(
zoom_index_gen(
mp=mp,
zoom=tile.zoom,
out_dir=(
idx_out_dir if idx_out_dir else mp.config.output.path
),
vrt=vrt,
),
total=mp.count_tiles(tile.zoom, tile.zoom),
unit="tile",
disable=debug or no_pbar
):
logger.debug("%s indexed", tile)
tqdm.tqdm.write(
"VRT(s) creation for %s finished" % mapchete_file,
file=verbose_dst
)
# process area
else:
with mapchete.open(
mapchete_file,
mode=mode,
zoom=zoom,
bounds=bounds_from_opts(
wkt_geometry=wkt_geometry,
point=point,
bounds=bounds,
raw_conf=raw_conf(mapchete_file)
),
single_input_file=input_file
) as mp:
spinner.stop()
tiles_count = mp.count_tiles(
min(mp.config.init_zoom_levels),
max(mp.config.init_zoom_levels)
)
tqdm.tqdm.write(
"processing %s tile(s) on %s worker(s)" % (tiles_count, multi),
file=verbose_dst
)
# run process on tiles
for process_info in tqdm.tqdm(
mp.batch_processor(
multi=multi, zoom=zoom, max_chunksize=max_chunksize
),
total=tiles_count,
unit="tile",
disable=debug or no_pbar
):
utils.write_verbose_msg(process_info, dst=verbose_dst)
tqdm.tqdm.write(
"processing %s finished" % mapchete_file, file=verbose_dst
)
# write VRT index
if vrt:
tqdm.tqdm.write("creating VRT(s)", file=verbose_dst)
for tile in tqdm.tqdm(
zoom_index_gen(
mp=mp,
zoom=mp.config.init_zoom_levels,
out_dir=(
idx_out_dir if idx_out_dir
else mp.config.output.path
),
vrt=vrt
),
total=mp.count_tiles(
min(mp.config.init_zoom_levels),
max(mp.config.init_zoom_levels)
),
unit="tile",
disable=debug or no_pbar
):
logger.debug("%s indexed", tile)
tqdm.tqdm.write(
"VRT(s) creation for %s finished" % mapchete_file,
file=verbose_dst
) | def execute(
mapchete_files,
zoom=None,
bounds=None,
point=None,
wkt_geometry=None,
tile=None,
overwrite=False,
multi=None,
input_file=None,
logfile=None,
verbose=False,
no_pbar=False,
debug=False,
max_chunksize=None,
vrt=False,
idx_out_dir=None
):
"""Execute a Mapchete process."""
multi = multi if multi else cpu_count()
mode = "overwrite" if overwrite else "continue"
# send verbose messages to /dev/null if not activated
if debug or not verbose:
verbose_dst = open(os.devnull, 'w')
else:
verbose_dst = sys.stdout
for mapchete_file in mapchete_files:
tqdm.tqdm.write("preparing to process %s" % mapchete_file, file=verbose_dst)
with click_spinner.spinner(disable=debug) as spinner:
# process single tile
if tile:
tile = raw_conf_process_pyramid(raw_conf(mapchete_file)).tile(*tile)
with mapchete.open(
mapchete_file,
mode=mode,
bounds=tile.bounds,
zoom=tile.zoom,
single_input_file=input_file
) as mp:
spinner.stop()
tqdm.tqdm.write("processing 1 tile", file=verbose_dst)
# run process on tile
for result in mp.batch_processor(tile=tile):
utils.write_verbose_msg(result, dst=verbose_dst)
tqdm.tqdm.write(
"processing %s finished" % mapchete_file, file=verbose_dst
)
# write VRT index
if vrt:
tqdm.tqdm.write("creating VRT", file=verbose_dst)
for tile in tqdm.tqdm(
zoom_index_gen(
mp=mp,
zoom=tile.zoom,
out_dir=(
idx_out_dir if idx_out_dir else mp.config.output.path
),
vrt=vrt,
),
total=mp.count_tiles(tile.zoom, tile.zoom),
unit="tile",
disable=debug or no_pbar
):
logger.debug("%s indexed", tile)
tqdm.tqdm.write(
"VRT(s) creation for %s finished" % mapchete_file,
file=verbose_dst
)
# process area
else:
with mapchete.open(
mapchete_file,
mode=mode,
zoom=zoom,
bounds=bounds_from_opts(
wkt_geometry=wkt_geometry,
point=point,
bounds=bounds,
raw_conf=raw_conf(mapchete_file)
),
single_input_file=input_file
) as mp:
spinner.stop()
tiles_count = mp.count_tiles(
min(mp.config.init_zoom_levels),
max(mp.config.init_zoom_levels)
)
tqdm.tqdm.write(
"processing %s tile(s) on %s worker(s)" % (tiles_count, multi),
file=verbose_dst
)
# run process on tiles
for process_info in tqdm.tqdm(
mp.batch_processor(
multi=multi, zoom=zoom, max_chunksize=max_chunksize
),
total=tiles_count,
unit="tile",
disable=debug or no_pbar
):
utils.write_verbose_msg(process_info, dst=verbose_dst)
tqdm.tqdm.write(
"processing %s finished" % mapchete_file, file=verbose_dst
)
# write VRT index
if vrt:
tqdm.tqdm.write("creating VRT(s)", file=verbose_dst)
for tile in tqdm.tqdm(
zoom_index_gen(
mp=mp,
zoom=mp.config.init_zoom_levels,
out_dir=(
idx_out_dir if idx_out_dir
else mp.config.output.path
),
vrt=vrt
),
total=mp.count_tiles(
min(mp.config.init_zoom_levels),
max(mp.config.init_zoom_levels)
),
unit="tile",
disable=debug or no_pbar
):
logger.debug("%s indexed", tile)
tqdm.tqdm.write(
"VRT(s) creation for %s finished" % mapchete_file,
file=verbose_dst
) | [
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"."
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | available_output_formats | Return all available output formats.
Returns
-------
formats : list
all available output formats | mapchete/formats/__init__.py | def available_output_formats():
"""
Return all available output formats.
Returns
-------
formats : list
all available output formats
"""
output_formats = []
for v in pkg_resources.iter_entry_points(DRIVERS_ENTRY_POINT):
driver_ = v.load()
if hasattr(driver_, "METADATA") and (
driver_.METADATA["mode"] in ["w", "rw"]
):
output_formats.append(driver_.METADATA["driver_name"])
return output_formats | def available_output_formats():
"""
Return all available output formats.
Returns
-------
formats : list
all available output formats
"""
output_formats = []
for v in pkg_resources.iter_entry_points(DRIVERS_ENTRY_POINT):
driver_ = v.load()
if hasattr(driver_, "METADATA") and (
driver_.METADATA["mode"] in ["w", "rw"]
):
output_formats.append(driver_.METADATA["driver_name"])
return output_formats | [
"Return",
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"available",
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"formats",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/__init__.py#L59-L75 | [
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valid | available_input_formats | Return all available input formats.
Returns
-------
formats : list
all available input formats | mapchete/formats/__init__.py | def available_input_formats():
"""
Return all available input formats.
Returns
-------
formats : list
all available input formats
"""
input_formats = []
for v in pkg_resources.iter_entry_points(DRIVERS_ENTRY_POINT):
logger.debug("driver found: %s", v)
driver_ = v.load()
if hasattr(driver_, "METADATA") and (driver_.METADATA["mode"] in ["r", "rw"]):
input_formats.append(driver_.METADATA["driver_name"])
return input_formats | def available_input_formats():
"""
Return all available input formats.
Returns
-------
formats : list
all available input formats
"""
input_formats = []
for v in pkg_resources.iter_entry_points(DRIVERS_ENTRY_POINT):
logger.debug("driver found: %s", v)
driver_ = v.load()
if hasattr(driver_, "METADATA") and (driver_.METADATA["mode"] in ["r", "rw"]):
input_formats.append(driver_.METADATA["driver_name"])
return input_formats | [
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/__init__.py#L78-L93 | [
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valid | load_output_writer | Return output class of driver.
Returns
-------
output : ``OutputData``
output writer object | mapchete/formats/__init__.py | def load_output_writer(output_params, readonly=False):
"""
Return output class of driver.
Returns
-------
output : ``OutputData``
output writer object
"""
if not isinstance(output_params, dict):
raise TypeError("output_params must be a dictionary")
driver_name = output_params["format"]
for v in pkg_resources.iter_entry_points(DRIVERS_ENTRY_POINT):
_driver = v.load()
if all(
[hasattr(_driver, attr) for attr in ["OutputData", "METADATA"]]
) and (
_driver.METADATA["driver_name"] == driver_name
):
return _driver.OutputData(output_params, readonly=readonly)
raise MapcheteDriverError("no loader for driver '%s' could be found." % driver_name) | def load_output_writer(output_params, readonly=False):
"""
Return output class of driver.
Returns
-------
output : ``OutputData``
output writer object
"""
if not isinstance(output_params, dict):
raise TypeError("output_params must be a dictionary")
driver_name = output_params["format"]
for v in pkg_resources.iter_entry_points(DRIVERS_ENTRY_POINT):
_driver = v.load()
if all(
[hasattr(_driver, attr) for attr in ["OutputData", "METADATA"]]
) and (
_driver.METADATA["driver_name"] == driver_name
):
return _driver.OutputData(output_params, readonly=readonly)
raise MapcheteDriverError("no loader for driver '%s' could be found." % driver_name) | [
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/__init__.py#L96-L116 | [
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valid | load_input_reader | Return input class of driver.
Returns
-------
input_params : ``InputData``
input parameters | mapchete/formats/__init__.py | def load_input_reader(input_params, readonly=False):
"""
Return input class of driver.
Returns
-------
input_params : ``InputData``
input parameters
"""
logger.debug("find input reader with params %s", input_params)
if not isinstance(input_params, dict):
raise TypeError("input_params must be a dictionary")
if "abstract" in input_params:
driver_name = input_params["abstract"]["format"]
elif "path" in input_params:
if os.path.splitext(input_params["path"])[1]:
input_file = input_params["path"]
driver_name = driver_from_file(input_file)
else:
logger.debug("%s is a directory", input_params["path"])
driver_name = "TileDirectory"
else:
raise MapcheteDriverError("invalid input parameters %s" % input_params)
for v in pkg_resources.iter_entry_points(DRIVERS_ENTRY_POINT):
driver_ = v.load()
if hasattr(driver_, "METADATA") and (
driver_.METADATA["driver_name"] == driver_name
):
return v.load().InputData(input_params, readonly=readonly)
raise MapcheteDriverError("no loader for driver '%s' could be found." % driver_name) | def load_input_reader(input_params, readonly=False):
"""
Return input class of driver.
Returns
-------
input_params : ``InputData``
input parameters
"""
logger.debug("find input reader with params %s", input_params)
if not isinstance(input_params, dict):
raise TypeError("input_params must be a dictionary")
if "abstract" in input_params:
driver_name = input_params["abstract"]["format"]
elif "path" in input_params:
if os.path.splitext(input_params["path"])[1]:
input_file = input_params["path"]
driver_name = driver_from_file(input_file)
else:
logger.debug("%s is a directory", input_params["path"])
driver_name = "TileDirectory"
else:
raise MapcheteDriverError("invalid input parameters %s" % input_params)
for v in pkg_resources.iter_entry_points(DRIVERS_ENTRY_POINT):
driver_ = v.load()
if hasattr(driver_, "METADATA") and (
driver_.METADATA["driver_name"] == driver_name
):
return v.load().InputData(input_params, readonly=readonly)
raise MapcheteDriverError("no loader for driver '%s' could be found." % driver_name) | [
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valid | driver_from_file | Guess driver from file extension.
Returns
-------
driver : string
driver name | mapchete/formats/__init__.py | def driver_from_file(input_file):
"""
Guess driver from file extension.
Returns
-------
driver : string
driver name
"""
file_ext = os.path.splitext(input_file)[1].split(".")[1]
if file_ext not in _file_ext_to_driver():
raise MapcheteDriverError(
"no driver could be found for file extension %s" % file_ext
)
driver = _file_ext_to_driver()[file_ext]
if len(driver) > 1:
warnings.warn(
DeprecationWarning(
"more than one driver for file found, taking %s" % driver[0]
)
)
return driver[0] | def driver_from_file(input_file):
"""
Guess driver from file extension.
Returns
-------
driver : string
driver name
"""
file_ext = os.path.splitext(input_file)[1].split(".")[1]
if file_ext not in _file_ext_to_driver():
raise MapcheteDriverError(
"no driver could be found for file extension %s" % file_ext
)
driver = _file_ext_to_driver()[file_ext]
if len(driver) > 1:
warnings.warn(
DeprecationWarning(
"more than one driver for file found, taking %s" % driver[0]
)
)
return driver[0] | [
"Guess",
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | write_output_metadata | Dump output JSON and verify parameters if output metadata exist. | mapchete/formats/__init__.py | def write_output_metadata(output_params):
"""Dump output JSON and verify parameters if output metadata exist."""
if "path" in output_params:
metadata_path = os.path.join(output_params["path"], "metadata.json")
logger.debug("check for output %s", metadata_path)
try:
existing_params = read_output_metadata(metadata_path)
logger.debug("%s exists", metadata_path)
logger.debug("existing output parameters: %s", pformat(existing_params))
existing_tp = existing_params["pyramid"]
current_params = params_to_dump(output_params)
logger.debug("current output parameters: %s", pformat(current_params))
current_tp = BufferedTilePyramid(**current_params["pyramid"])
if existing_tp != current_tp:
raise MapcheteConfigError(
"pyramid definitions between existing and new output do not match: "
"%s != %s" % (existing_tp, current_tp)
)
existing_format = existing_params["driver"]["format"]
current_format = current_params["driver"]["format"]
if existing_format != current_format:
raise MapcheteConfigError(
"existing output format does not match new output format: "
"%s != %s" % (
(existing_format, current_format)
)
)
except FileNotFoundError:
logger.debug("%s does not exist", metadata_path)
dump_params = params_to_dump(output_params)
# dump output metadata
write_json(metadata_path, dump_params)
else:
logger.debug("no path parameter found") | def write_output_metadata(output_params):
"""Dump output JSON and verify parameters if output metadata exist."""
if "path" in output_params:
metadata_path = os.path.join(output_params["path"], "metadata.json")
logger.debug("check for output %s", metadata_path)
try:
existing_params = read_output_metadata(metadata_path)
logger.debug("%s exists", metadata_path)
logger.debug("existing output parameters: %s", pformat(existing_params))
existing_tp = existing_params["pyramid"]
current_params = params_to_dump(output_params)
logger.debug("current output parameters: %s", pformat(current_params))
current_tp = BufferedTilePyramid(**current_params["pyramid"])
if existing_tp != current_tp:
raise MapcheteConfigError(
"pyramid definitions between existing and new output do not match: "
"%s != %s" % (existing_tp, current_tp)
)
existing_format = existing_params["driver"]["format"]
current_format = current_params["driver"]["format"]
if existing_format != current_format:
raise MapcheteConfigError(
"existing output format does not match new output format: "
"%s != %s" % (
(existing_format, current_format)
)
)
except FileNotFoundError:
logger.debug("%s does not exist", metadata_path)
dump_params = params_to_dump(output_params)
# dump output metadata
write_json(metadata_path, dump_params)
else:
logger.debug("no path parameter found") | [
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"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/__init__.py#L226-L259 | [
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valid | formats | List input and/or output formats. | mapchete/cli/default/formats.py | def formats(input_formats, output_formats, debug=False):
"""List input and/or output formats."""
if input_formats == output_formats:
show_inputs, show_outputs = True, True
else:
show_inputs, show_outputs = input_formats, output_formats
if show_inputs:
click.echo("input formats:")
for driver in available_input_formats():
click.echo("- %s" % driver)
if show_outputs:
click.echo("output formats:")
for driver in available_output_formats():
click.echo("- %s" % driver) | def formats(input_formats, output_formats, debug=False):
"""List input and/or output formats."""
if input_formats == output_formats:
show_inputs, show_outputs = True, True
else:
show_inputs, show_outputs = input_formats, output_formats
if show_inputs:
click.echo("input formats:")
for driver in available_input_formats():
click.echo("- %s" % driver)
if show_outputs:
click.echo("output formats:")
for driver in available_output_formats():
click.echo("- %s" % driver) | [
"List",
"input",
"and",
"/",
"or",
"output",
"formats",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/cli/default/formats.py#L13-L27 | [
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valid | InputData.open | Return InputTile object.
Parameters
----------
tile : ``Tile``
tile_directory_zoom : None
If set, data will be read from exactly this zoom level
matching_method : str ('gdal' or 'min') (default: 'gdal')
gdal: Uses GDAL's standard method. Here, the target resolution is calculated
by averaging the extent's pixel sizes over both x and y axes. This
approach returns a zoom level which may not have the best quality but will
speed up reading significantly.
min: Returns the zoom level which matches the minimum resolution of the
extents four corner pixels. This approach returns the zoom level with the
best possible quality but with low performance. If the tile extent is
outside of the destination pyramid, a TopologicalError will be raised.
matching_max_zoom : int (default: None)
If set, it will prevent reading from zoom levels above the maximum.
matching_precision : int
Round resolutions to n digits before comparing.
fallback_to_higher_zoom : bool (default: False)
In case no data is found at zoom level, try to read data from higher zoom
levels. Enabling this setting can lead to many IO requests in areas with no
data.
resampling : string
raster file: one of "nearest", "average", "bilinear" or "lanczos"
Returns
-------
input tile : ``InputTile``
tile view of input data | mapchete/formats/default/tile_directory.py | def open(
self,
tile,
tile_directory_zoom=None,
matching_method="gdal",
matching_max_zoom=None,
matching_precision=8,
fallback_to_higher_zoom=False,
resampling="nearest",
**kwargs
):
"""
Return InputTile object.
Parameters
----------
tile : ``Tile``
tile_directory_zoom : None
If set, data will be read from exactly this zoom level
matching_method : str ('gdal' or 'min') (default: 'gdal')
gdal: Uses GDAL's standard method. Here, the target resolution is calculated
by averaging the extent's pixel sizes over both x and y axes. This
approach returns a zoom level which may not have the best quality but will
speed up reading significantly.
min: Returns the zoom level which matches the minimum resolution of the
extents four corner pixels. This approach returns the zoom level with the
best possible quality but with low performance. If the tile extent is
outside of the destination pyramid, a TopologicalError will be raised.
matching_max_zoom : int (default: None)
If set, it will prevent reading from zoom levels above the maximum.
matching_precision : int
Round resolutions to n digits before comparing.
fallback_to_higher_zoom : bool (default: False)
In case no data is found at zoom level, try to read data from higher zoom
levels. Enabling this setting can lead to many IO requests in areas with no
data.
resampling : string
raster file: one of "nearest", "average", "bilinear" or "lanczos"
Returns
-------
input tile : ``InputTile``
tile view of input data
"""
# determine tile bounds in TileDirectory CRS
td_bounds = reproject_geometry(
tile.bbox,
src_crs=tile.tp.crs,
dst_crs=self.td_pyramid.crs
).bounds
# find target zoom level
if tile_directory_zoom is not None:
zoom = tile_directory_zoom
else:
zoom = tile_to_zoom_level(
tile, dst_pyramid=self.td_pyramid, matching_method=matching_method,
precision=matching_precision
)
if matching_max_zoom is not None:
zoom = min([zoom, matching_max_zoom])
if fallback_to_higher_zoom:
tiles_paths = []
# check if tiles exist otherwise try higher zoom level
while len(tiles_paths) == 0 and zoom >= 0:
tiles_paths = _get_tiles_paths(
basepath=self.path,
ext=self._ext,
pyramid=self.td_pyramid,
bounds=td_bounds,
zoom=zoom
)
logger.debug("%s existing tiles found at zoom %s", len(tiles_paths), zoom)
zoom -= 1
else:
tiles_paths = _get_tiles_paths(
basepath=self.path,
ext=self._ext,
pyramid=self.td_pyramid,
bounds=td_bounds,
zoom=zoom
)
logger.debug("%s existing tiles found at zoom %s", len(tiles_paths), zoom)
return InputTile(
tile,
tiles_paths=tiles_paths,
file_type=self._file_type,
profile=self._profile,
td_crs=self.td_pyramid.crs,
resampling=resampling,
read_as_tiledir_func=self._read_as_tiledir_func,
**kwargs
) | def open(
self,
tile,
tile_directory_zoom=None,
matching_method="gdal",
matching_max_zoom=None,
matching_precision=8,
fallback_to_higher_zoom=False,
resampling="nearest",
**kwargs
):
"""
Return InputTile object.
Parameters
----------
tile : ``Tile``
tile_directory_zoom : None
If set, data will be read from exactly this zoom level
matching_method : str ('gdal' or 'min') (default: 'gdal')
gdal: Uses GDAL's standard method. Here, the target resolution is calculated
by averaging the extent's pixel sizes over both x and y axes. This
approach returns a zoom level which may not have the best quality but will
speed up reading significantly.
min: Returns the zoom level which matches the minimum resolution of the
extents four corner pixels. This approach returns the zoom level with the
best possible quality but with low performance. If the tile extent is
outside of the destination pyramid, a TopologicalError will be raised.
matching_max_zoom : int (default: None)
If set, it will prevent reading from zoom levels above the maximum.
matching_precision : int
Round resolutions to n digits before comparing.
fallback_to_higher_zoom : bool (default: False)
In case no data is found at zoom level, try to read data from higher zoom
levels. Enabling this setting can lead to many IO requests in areas with no
data.
resampling : string
raster file: one of "nearest", "average", "bilinear" or "lanczos"
Returns
-------
input tile : ``InputTile``
tile view of input data
"""
# determine tile bounds in TileDirectory CRS
td_bounds = reproject_geometry(
tile.bbox,
src_crs=tile.tp.crs,
dst_crs=self.td_pyramid.crs
).bounds
# find target zoom level
if tile_directory_zoom is not None:
zoom = tile_directory_zoom
else:
zoom = tile_to_zoom_level(
tile, dst_pyramid=self.td_pyramid, matching_method=matching_method,
precision=matching_precision
)
if matching_max_zoom is not None:
zoom = min([zoom, matching_max_zoom])
if fallback_to_higher_zoom:
tiles_paths = []
# check if tiles exist otherwise try higher zoom level
while len(tiles_paths) == 0 and zoom >= 0:
tiles_paths = _get_tiles_paths(
basepath=self.path,
ext=self._ext,
pyramid=self.td_pyramid,
bounds=td_bounds,
zoom=zoom
)
logger.debug("%s existing tiles found at zoom %s", len(tiles_paths), zoom)
zoom -= 1
else:
tiles_paths = _get_tiles_paths(
basepath=self.path,
ext=self._ext,
pyramid=self.td_pyramid,
bounds=td_bounds,
zoom=zoom
)
logger.debug("%s existing tiles found at zoom %s", len(tiles_paths), zoom)
return InputTile(
tile,
tiles_paths=tiles_paths,
file_type=self._file_type,
profile=self._profile,
td_crs=self.td_pyramid.crs,
resampling=resampling,
read_as_tiledir_func=self._read_as_tiledir_func,
**kwargs
) | [
"Return",
"InputTile",
"object",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/tile_directory.py#L131-L224 | [
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valid | InputData.bbox | Return data bounding box.
Parameters
----------
out_crs : ``rasterio.crs.CRS``
rasterio CRS object (default: CRS of process pyramid)
Returns
-------
bounding box : geometry
Shapely geometry object | mapchete/formats/default/tile_directory.py | def bbox(self, out_crs=None):
"""
Return data bounding box.
Parameters
----------
out_crs : ``rasterio.crs.CRS``
rasterio CRS object (default: CRS of process pyramid)
Returns
-------
bounding box : geometry
Shapely geometry object
"""
return reproject_geometry(
box(*self._bounds),
src_crs=self.td_pyramid.crs,
dst_crs=self.pyramid.crs if out_crs is None else out_crs
) | def bbox(self, out_crs=None):
"""
Return data bounding box.
Parameters
----------
out_crs : ``rasterio.crs.CRS``
rasterio CRS object (default: CRS of process pyramid)
Returns
-------
bounding box : geometry
Shapely geometry object
"""
return reproject_geometry(
box(*self._bounds),
src_crs=self.td_pyramid.crs,
dst_crs=self.pyramid.crs if out_crs is None else out_crs
) | [
"Return",
"data",
"bounding",
"box",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/tile_directory.py#L226-L244 | [
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valid | InputTile.read | Read reprojected & resampled input data.
Parameters
----------
validity_check : bool
vector file: also run checks if reprojected geometry is valid,
otherwise throw RuntimeError (default: True)
indexes : list or int
raster file: a list of band numbers; None will read all.
dst_nodata : int or float, optional
raster file: if not set, the nodata value from the source dataset
will be used
gdal_opts : dict
raster file: GDAL options passed on to rasterio.Env()
Returns
-------
data : list for vector files or numpy array for raster files | mapchete/formats/default/tile_directory.py | def read(
self,
validity_check=False,
indexes=None,
resampling=None,
dst_nodata=None,
gdal_opts=None,
**kwargs
):
"""
Read reprojected & resampled input data.
Parameters
----------
validity_check : bool
vector file: also run checks if reprojected geometry is valid,
otherwise throw RuntimeError (default: True)
indexes : list or int
raster file: a list of band numbers; None will read all.
dst_nodata : int or float, optional
raster file: if not set, the nodata value from the source dataset
will be used
gdal_opts : dict
raster file: GDAL options passed on to rasterio.Env()
Returns
-------
data : list for vector files or numpy array for raster files
"""
return self._read_as_tiledir(
data_type=self._file_type,
out_tile=self.tile,
td_crs=self._td_crs,
tiles_paths=self._tiles_paths,
profile=self._profile,
validity_check=validity_check,
indexes=indexes,
resampling=resampling if resampling else self._resampling,
dst_nodata=dst_nodata,
gdal_opts=gdal_opts,
**{k: v for k, v in kwargs.items() if k != "data_type"}
) | def read(
self,
validity_check=False,
indexes=None,
resampling=None,
dst_nodata=None,
gdal_opts=None,
**kwargs
):
"""
Read reprojected & resampled input data.
Parameters
----------
validity_check : bool
vector file: also run checks if reprojected geometry is valid,
otherwise throw RuntimeError (default: True)
indexes : list or int
raster file: a list of band numbers; None will read all.
dst_nodata : int or float, optional
raster file: if not set, the nodata value from the source dataset
will be used
gdal_opts : dict
raster file: GDAL options passed on to rasterio.Env()
Returns
-------
data : list for vector files or numpy array for raster files
"""
return self._read_as_tiledir(
data_type=self._file_type,
out_tile=self.tile,
td_crs=self._td_crs,
tiles_paths=self._tiles_paths,
profile=self._profile,
validity_check=validity_check,
indexes=indexes,
resampling=resampling if resampling else self._resampling,
dst_nodata=dst_nodata,
gdal_opts=gdal_opts,
**{k: v for k, v in kwargs.items() if k != "data_type"}
) | [
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"data",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/default/tile_directory.py#L288-L330 | [
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valid | extract_contours | Extract contour lines from an array.
Parameters
----------
array : array
input elevation data
tile : Tile
tile covering the array
interval : integer
elevation value interval when drawing contour lines
field : string
output field name containing elevation value
base : integer
elevation base value the intervals are computed from
Returns
-------
contours : iterable
contours as GeoJSON-like pairs of properties and geometry | mapchete/commons/contours.py | def extract_contours(array, tile, interval=100, field='elev', base=0):
"""
Extract contour lines from an array.
Parameters
----------
array : array
input elevation data
tile : Tile
tile covering the array
interval : integer
elevation value interval when drawing contour lines
field : string
output field name containing elevation value
base : integer
elevation base value the intervals are computed from
Returns
-------
contours : iterable
contours as GeoJSON-like pairs of properties and geometry
"""
import matplotlib.pyplot as plt
levels = _get_contour_values(
array.min(), array.max(), interval=interval, base=base)
if not levels:
return []
contours = plt.contour(array, levels)
index = 0
out_contours = []
for level in range(len(contours.collections)):
elevation = levels[index]
index += 1
paths = contours.collections[level].get_paths()
for path in paths:
out_coords = [
(
tile.left + (y * tile.pixel_x_size),
tile.top - (x * tile.pixel_y_size),
)
for x, y in zip(path.vertices[:, 1], path.vertices[:, 0])
]
if len(out_coords) >= 2:
out_contours.append(
dict(
properties={field: elevation},
geometry=mapping(LineString(out_coords))
)
)
return out_contours | def extract_contours(array, tile, interval=100, field='elev', base=0):
"""
Extract contour lines from an array.
Parameters
----------
array : array
input elevation data
tile : Tile
tile covering the array
interval : integer
elevation value interval when drawing contour lines
field : string
output field name containing elevation value
base : integer
elevation base value the intervals are computed from
Returns
-------
contours : iterable
contours as GeoJSON-like pairs of properties and geometry
"""
import matplotlib.pyplot as plt
levels = _get_contour_values(
array.min(), array.max(), interval=interval, base=base)
if not levels:
return []
contours = plt.contour(array, levels)
index = 0
out_contours = []
for level in range(len(contours.collections)):
elevation = levels[index]
index += 1
paths = contours.collections[level].get_paths()
for path in paths:
out_coords = [
(
tile.left + (y * tile.pixel_x_size),
tile.top - (x * tile.pixel_y_size),
)
for x, y in zip(path.vertices[:, 1], path.vertices[:, 0])
]
if len(out_coords) >= 2:
out_contours.append(
dict(
properties={field: elevation},
geometry=mapping(LineString(out_coords))
)
)
return out_contours | [
"Extract",
"contour",
"lines",
"from",
"an",
"array",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/commons/contours.py#L6-L55 | [
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valid | _get_contour_values | Return a list of values between min and max within an interval. | mapchete/commons/contours.py | def _get_contour_values(min_val, max_val, base=0, interval=100):
"""Return a list of values between min and max within an interval."""
i = base
out = []
if min_val < base:
while i >= min_val:
i -= interval
while i <= max_val:
if i >= min_val:
out.append(i)
i += interval
return out | def _get_contour_values(min_val, max_val, base=0, interval=100):
"""Return a list of values between min and max within an interval."""
i = base
out = []
if min_val < base:
while i >= min_val:
i -= interval
while i <= max_val:
if i >= min_val:
out.append(i)
i += interval
return out | [
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/commons/contours.py#L58-L69 | [
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valid | create | Create an empty Mapchete and process file in a given directory. | mapchete/cli/default/create.py | def create(
mapchete_file,
process_file,
out_format,
out_path=None,
pyramid_type=None,
force=False
):
"""Create an empty Mapchete and process file in a given directory."""
if os.path.isfile(process_file) or os.path.isfile(mapchete_file):
if not force:
raise IOError("file(s) already exists")
out_path = out_path if out_path else os.path.join(os.getcwd(), "output")
# copy file template to target directory
process_template = pkg_resources.resource_filename(
"mapchete.static", "process_template.py"
)
process_file = os.path.join(os.getcwd(), process_file)
copyfile(process_template, process_file)
# modify and copy mapchete file template to target directory
mapchete_template = pkg_resources.resource_filename(
"mapchete.static", "mapchete_template.mapchete"
)
output_options = dict(
format=out_format, path=out_path, **FORMAT_MANDATORY[out_format]
)
pyramid_options = {'grid': pyramid_type}
substitute_elements = {
'process_file': process_file,
'output': dump({'output': output_options}, default_flow_style=False),
'pyramid': dump({'pyramid': pyramid_options}, default_flow_style=False)
}
with open(mapchete_template, 'r') as config_template:
config = Template(config_template.read())
customized_config = config.substitute(substitute_elements)
with open(mapchete_file, 'w') as target_config:
target_config.write(customized_config) | def create(
mapchete_file,
process_file,
out_format,
out_path=None,
pyramid_type=None,
force=False
):
"""Create an empty Mapchete and process file in a given directory."""
if os.path.isfile(process_file) or os.path.isfile(mapchete_file):
if not force:
raise IOError("file(s) already exists")
out_path = out_path if out_path else os.path.join(os.getcwd(), "output")
# copy file template to target directory
process_template = pkg_resources.resource_filename(
"mapchete.static", "process_template.py"
)
process_file = os.path.join(os.getcwd(), process_file)
copyfile(process_template, process_file)
# modify and copy mapchete file template to target directory
mapchete_template = pkg_resources.resource_filename(
"mapchete.static", "mapchete_template.mapchete"
)
output_options = dict(
format=out_format, path=out_path, **FORMAT_MANDATORY[out_format]
)
pyramid_options = {'grid': pyramid_type}
substitute_elements = {
'process_file': process_file,
'output': dump({'output': output_options}, default_flow_style=False),
'pyramid': dump({'pyramid': pyramid_options}, default_flow_style=False)
}
with open(mapchete_template, 'r') as config_template:
config = Template(config_template.read())
customized_config = config.substitute(substitute_elements)
with open(mapchete_file, 'w') as target_config:
target_config.write(customized_config) | [
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"in",
"a",
"given",
"directory",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/cli/default/create.py#L49-L91 | [
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valid | OutputData.tiles_exist | Check whether output tiles of a tile (either process or output) exists.
Parameters
----------
process_tile : ``BufferedTile``
must be member of process ``TilePyramid``
output_tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
exists : bool | mapchete/formats/base.py | def tiles_exist(self, process_tile=None, output_tile=None):
"""
Check whether output tiles of a tile (either process or output) exists.
Parameters
----------
process_tile : ``BufferedTile``
must be member of process ``TilePyramid``
output_tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
exists : bool
"""
if process_tile and output_tile:
raise ValueError("just one of 'process_tile' and 'output_tile' allowed")
if process_tile:
return any(
path_exists(self.get_path(tile))
for tile in self.pyramid.intersecting(process_tile)
)
if output_tile:
return path_exists(self.get_path(output_tile)) | def tiles_exist(self, process_tile=None, output_tile=None):
"""
Check whether output tiles of a tile (either process or output) exists.
Parameters
----------
process_tile : ``BufferedTile``
must be member of process ``TilePyramid``
output_tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
exists : bool
"""
if process_tile and output_tile:
raise ValueError("just one of 'process_tile' and 'output_tile' allowed")
if process_tile:
return any(
path_exists(self.get_path(tile))
for tile in self.pyramid.intersecting(process_tile)
)
if output_tile:
return path_exists(self.get_path(output_tile)) | [
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valid | OutputData.get_path | Determine target file path.
Parameters
----------
tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
path : string | mapchete/formats/base.py | def get_path(self, tile):
"""
Determine target file path.
Parameters
----------
tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
path : string
"""
return os.path.join(*[
self.path,
str(tile.zoom),
str(tile.row),
str(tile.col) + self.file_extension
]) | def get_path(self, tile):
"""
Determine target file path.
Parameters
----------
tile : ``BufferedTile``
must be member of output ``TilePyramid``
Returns
-------
path : string
"""
return os.path.join(*[
self.path,
str(tile.zoom),
str(tile.row),
str(tile.col) + self.file_extension
]) | [
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valid | OutputData.prepare_path | Create directory and subdirectory if necessary.
Parameters
----------
tile : ``BufferedTile``
must be member of output ``TilePyramid`` | mapchete/formats/base.py | def prepare_path(self, tile):
"""
Create directory and subdirectory if necessary.
Parameters
----------
tile : ``BufferedTile``
must be member of output ``TilePyramid``
"""
makedirs(os.path.dirname(self.get_path(tile))) | def prepare_path(self, tile):
"""
Create directory and subdirectory if necessary.
Parameters
----------
tile : ``BufferedTile``
must be member of output ``TilePyramid``
"""
makedirs(os.path.dirname(self.get_path(tile))) | [
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/base.py#L276-L285 | [
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valid | OutputData.output_is_valid | Check whether process output is allowed with output driver.
Parameters
----------
process_data : raw process output
Returns
-------
True or False | mapchete/formats/base.py | def output_is_valid(self, process_data):
"""
Check whether process output is allowed with output driver.
Parameters
----------
process_data : raw process output
Returns
-------
True or False
"""
if self.METADATA["data_type"] == "raster":
return (
is_numpy_or_masked_array(process_data) or
is_numpy_or_masked_array_with_tags(process_data)
)
elif self.METADATA["data_type"] == "vector":
return is_feature_list(process_data) | def output_is_valid(self, process_data):
"""
Check whether process output is allowed with output driver.
Parameters
----------
process_data : raw process output
Returns
-------
True or False
"""
if self.METADATA["data_type"] == "raster":
return (
is_numpy_or_masked_array(process_data) or
is_numpy_or_masked_array_with_tags(process_data)
)
elif self.METADATA["data_type"] == "vector":
return is_feature_list(process_data) | [
"Check",
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"with",
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"driver",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/base.py#L318-L336 | [
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valid | OutputData.output_cleaned | Return verified and cleaned output.
Parameters
----------
process_data : raw process output
Returns
-------
NumPy array or list of features. | mapchete/formats/base.py | def output_cleaned(self, process_data):
"""
Return verified and cleaned output.
Parameters
----------
process_data : raw process output
Returns
-------
NumPy array or list of features.
"""
if self.METADATA["data_type"] == "raster":
if is_numpy_or_masked_array(process_data):
return process_data
elif is_numpy_or_masked_array_with_tags(process_data):
data, tags = process_data
return self.output_cleaned(data), tags
elif self.METADATA["data_type"] == "vector":
return list(process_data) | def output_cleaned(self, process_data):
"""
Return verified and cleaned output.
Parameters
----------
process_data : raw process output
Returns
-------
NumPy array or list of features.
"""
if self.METADATA["data_type"] == "raster":
if is_numpy_or_masked_array(process_data):
return process_data
elif is_numpy_or_masked_array_with_tags(process_data):
data, tags = process_data
return self.output_cleaned(data), tags
elif self.METADATA["data_type"] == "vector":
return list(process_data) | [
"Return",
"verified",
"and",
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"output",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/base.py#L338-L357 | [
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valid | OutputData.extract_subset | Extract subset from multiple tiles.
input_data_tiles : list of (``Tile``, process data) tuples
out_tile : ``Tile``
Returns
-------
NumPy array or list of features. | mapchete/formats/base.py | def extract_subset(self, input_data_tiles=None, out_tile=None):
"""
Extract subset from multiple tiles.
input_data_tiles : list of (``Tile``, process data) tuples
out_tile : ``Tile``
Returns
-------
NumPy array or list of features.
"""
if self.METADATA["data_type"] == "raster":
mosaic = create_mosaic(input_data_tiles)
return extract_from_array(
in_raster=prepare_array(
mosaic.data,
nodata=self.nodata,
dtype=self.output_params["dtype"]
),
in_affine=mosaic.affine,
out_tile=out_tile
)
elif self.METADATA["data_type"] == "vector":
return [
feature for feature in list(
chain.from_iterable([features for _, features in input_data_tiles])
)
if shape(feature["geometry"]).intersects(out_tile.bbox)
] | def extract_subset(self, input_data_tiles=None, out_tile=None):
"""
Extract subset from multiple tiles.
input_data_tiles : list of (``Tile``, process data) tuples
out_tile : ``Tile``
Returns
-------
NumPy array or list of features.
"""
if self.METADATA["data_type"] == "raster":
mosaic = create_mosaic(input_data_tiles)
return extract_from_array(
in_raster=prepare_array(
mosaic.data,
nodata=self.nodata,
dtype=self.output_params["dtype"]
),
in_affine=mosaic.affine,
out_tile=out_tile
)
elif self.METADATA["data_type"] == "vector":
return [
feature for feature in list(
chain.from_iterable([features for _, features in input_data_tiles])
)
if shape(feature["geometry"]).intersects(out_tile.bbox)
] | [
"Extract",
"subset",
"from",
"multiple",
"tiles",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/base.py#L359-L387 | [
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valid | OutputData._read_as_tiledir | Read reprojected & resampled input data.
Parameters
----------
validity_check : bool
vector file: also run checks if reprojected geometry is valid,
otherwise throw RuntimeError (default: True)
indexes : list or int
raster file: a list of band numbers; None will read all.
dst_nodata : int or float, optional
raster file: if not set, the nodata value from the source dataset
will be used
gdal_opts : dict
raster file: GDAL options passed on to rasterio.Env()
Returns
-------
data : list for vector files or numpy array for raster files | mapchete/formats/base.py | def _read_as_tiledir(
self,
out_tile=None,
td_crs=None,
tiles_paths=None,
profile=None,
validity_check=False,
indexes=None,
resampling=None,
dst_nodata=None,
gdal_opts=None,
**kwargs
):
"""
Read reprojected & resampled input data.
Parameters
----------
validity_check : bool
vector file: also run checks if reprojected geometry is valid,
otherwise throw RuntimeError (default: True)
indexes : list or int
raster file: a list of band numbers; None will read all.
dst_nodata : int or float, optional
raster file: if not set, the nodata value from the source dataset
will be used
gdal_opts : dict
raster file: GDAL options passed on to rasterio.Env()
Returns
-------
data : list for vector files or numpy array for raster files
"""
return _read_as_tiledir(
data_type=self.METADATA["data_type"],
out_tile=out_tile,
td_crs=td_crs,
tiles_paths=tiles_paths,
profile=profile,
validity_check=validity_check,
indexes=indexes,
resampling=resampling,
dst_nodata=dst_nodata,
gdal_opts=gdal_opts,
**{k: v for k, v in kwargs.items() if k != "data_type"}
) | def _read_as_tiledir(
self,
out_tile=None,
td_crs=None,
tiles_paths=None,
profile=None,
validity_check=False,
indexes=None,
resampling=None,
dst_nodata=None,
gdal_opts=None,
**kwargs
):
"""
Read reprojected & resampled input data.
Parameters
----------
validity_check : bool
vector file: also run checks if reprojected geometry is valid,
otherwise throw RuntimeError (default: True)
indexes : list or int
raster file: a list of band numbers; None will read all.
dst_nodata : int or float, optional
raster file: if not set, the nodata value from the source dataset
will be used
gdal_opts : dict
raster file: GDAL options passed on to rasterio.Env()
Returns
-------
data : list for vector files or numpy array for raster files
"""
return _read_as_tiledir(
data_type=self.METADATA["data_type"],
out_tile=out_tile,
td_crs=td_crs,
tiles_paths=tiles_paths,
profile=profile,
validity_check=validity_check,
indexes=indexes,
resampling=resampling,
dst_nodata=dst_nodata,
gdal_opts=gdal_opts,
**{k: v for k, v in kwargs.items() if k != "data_type"}
) | [
"Read",
"reprojected",
"&",
"resampled",
"input",
"data",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/formats/base.py#L400-L446 | [
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valid | calculate_slope_aspect | Calculate slope and aspect map.
Return a pair of arrays 2 pixels smaller than the input elevation array.
Slope is returned in radians, from 0 for sheer face to pi/2 for
flat ground. Aspect is returned in radians, counterclockwise from -pi
at north around to pi.
Logic here is borrowed from hillshade.cpp:
http://www.perrygeo.net/wordpress/?p=7
Parameters
----------
elevation : array
input elevation data
xres : float
column width
yres : float
row height
z : float
vertical exaggeration factor
scale : float
scale factor of pixel size units versus height units (insert 112000
when having elevation values in meters in a geodetic projection)
Returns
-------
slope shade : array | mapchete/commons/hillshade.py | def calculate_slope_aspect(elevation, xres, yres, z=1.0, scale=1.0):
"""
Calculate slope and aspect map.
Return a pair of arrays 2 pixels smaller than the input elevation array.
Slope is returned in radians, from 0 for sheer face to pi/2 for
flat ground. Aspect is returned in radians, counterclockwise from -pi
at north around to pi.
Logic here is borrowed from hillshade.cpp:
http://www.perrygeo.net/wordpress/?p=7
Parameters
----------
elevation : array
input elevation data
xres : float
column width
yres : float
row height
z : float
vertical exaggeration factor
scale : float
scale factor of pixel size units versus height units (insert 112000
when having elevation values in meters in a geodetic projection)
Returns
-------
slope shade : array
"""
z = float(z)
scale = float(scale)
height, width = elevation.shape[0] - 2, elevation.shape[1] - 2
window = [
z * elevation[row:(row + height), col:(col + width)]
for (row, col) in product(range(3), range(3))
]
x = (
(window[0] + window[3] + window[3] + window[6])
- (window[2] + window[5] + window[5] + window[8])
) / (8.0 * xres * scale)
y = (
(window[6] + window[7] + window[7] + window[8])
- (window[0] + window[1] + window[1] + window[2])
) / (8.0 * yres * scale)
# in radians, from 0 to pi/2
slope = math.pi/2 - np.arctan(np.sqrt(x*x + y*y))
# in radians counterclockwise, from -pi at north back to pi
aspect = np.arctan2(x, y)
return slope, aspect | def calculate_slope_aspect(elevation, xres, yres, z=1.0, scale=1.0):
"""
Calculate slope and aspect map.
Return a pair of arrays 2 pixels smaller than the input elevation array.
Slope is returned in radians, from 0 for sheer face to pi/2 for
flat ground. Aspect is returned in radians, counterclockwise from -pi
at north around to pi.
Logic here is borrowed from hillshade.cpp:
http://www.perrygeo.net/wordpress/?p=7
Parameters
----------
elevation : array
input elevation data
xres : float
column width
yres : float
row height
z : float
vertical exaggeration factor
scale : float
scale factor of pixel size units versus height units (insert 112000
when having elevation values in meters in a geodetic projection)
Returns
-------
slope shade : array
"""
z = float(z)
scale = float(scale)
height, width = elevation.shape[0] - 2, elevation.shape[1] - 2
window = [
z * elevation[row:(row + height), col:(col + width)]
for (row, col) in product(range(3), range(3))
]
x = (
(window[0] + window[3] + window[3] + window[6])
- (window[2] + window[5] + window[5] + window[8])
) / (8.0 * xres * scale)
y = (
(window[6] + window[7] + window[7] + window[8])
- (window[0] + window[1] + window[1] + window[2])
) / (8.0 * yres * scale)
# in radians, from 0 to pi/2
slope = math.pi/2 - np.arctan(np.sqrt(x*x + y*y))
# in radians counterclockwise, from -pi at north back to pi
aspect = np.arctan2(x, y)
return slope, aspect | [
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"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/commons/hillshade.py#L42-L92 | [
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valid | hillshade | Return hillshaded numpy array.
Parameters
----------
elevation : array
input elevation data
tile : Tile
tile covering the array
z : float
vertical exaggeration factor
scale : float
scale factor of pixel size units versus height units (insert 112000
when having elevation values in meters in a geodetic projection) | mapchete/commons/hillshade.py | def hillshade(elevation, tile, azimuth=315.0, altitude=45.0, z=1.0, scale=1.0):
"""
Return hillshaded numpy array.
Parameters
----------
elevation : array
input elevation data
tile : Tile
tile covering the array
z : float
vertical exaggeration factor
scale : float
scale factor of pixel size units versus height units (insert 112000
when having elevation values in meters in a geodetic projection)
"""
azimuth = float(azimuth)
altitude = float(altitude)
z = float(z)
scale = float(scale)
xres = tile.tile.pixel_x_size
yres = -tile.tile.pixel_y_size
slope, aspect = calculate_slope_aspect(
elevation, xres, yres, z=z, scale=scale)
deg2rad = math.pi / 180.0
shaded = np.sin(altitude * deg2rad) * np.sin(slope) \
+ np.cos(altitude * deg2rad) * np.cos(slope) \
* np.cos((azimuth - 90.0) * deg2rad - aspect)
# shaded now has values between -1.0 and +1.0
# stretch to 0 - 255 and invert
shaded = (((shaded+1.0)/2)*-255.0).astype("uint8")
# add one pixel padding using the edge values
return ma.masked_array(
data=np.pad(shaded, 1, mode='edge'), mask=elevation.mask
) | def hillshade(elevation, tile, azimuth=315.0, altitude=45.0, z=1.0, scale=1.0):
"""
Return hillshaded numpy array.
Parameters
----------
elevation : array
input elevation data
tile : Tile
tile covering the array
z : float
vertical exaggeration factor
scale : float
scale factor of pixel size units versus height units (insert 112000
when having elevation values in meters in a geodetic projection)
"""
azimuth = float(azimuth)
altitude = float(altitude)
z = float(z)
scale = float(scale)
xres = tile.tile.pixel_x_size
yres = -tile.tile.pixel_y_size
slope, aspect = calculate_slope_aspect(
elevation, xres, yres, z=z, scale=scale)
deg2rad = math.pi / 180.0
shaded = np.sin(altitude * deg2rad) * np.sin(slope) \
+ np.cos(altitude * deg2rad) * np.cos(slope) \
* np.cos((azimuth - 90.0) * deg2rad - aspect)
# shaded now has values between -1.0 and +1.0
# stretch to 0 - 255 and invert
shaded = (((shaded+1.0)/2)*-255.0).astype("uint8")
# add one pixel padding using the edge values
return ma.masked_array(
data=np.pad(shaded, 1, mode='edge'), mask=elevation.mask
) | [
"Return",
"hillshaded",
"numpy",
"array",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/commons/hillshade.py#L95-L129 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | BufferedTilePyramid.tile | Return ``BufferedTile`` object of this ``BufferedTilePyramid``.
Parameters
----------
zoom : integer
zoom level
row : integer
tile matrix row
col : integer
tile matrix column
Returns
-------
buffered tile : ``BufferedTile`` | mapchete/tile.py | def tile(self, zoom, row, col):
"""
Return ``BufferedTile`` object of this ``BufferedTilePyramid``.
Parameters
----------
zoom : integer
zoom level
row : integer
tile matrix row
col : integer
tile matrix column
Returns
-------
buffered tile : ``BufferedTile``
"""
tile = self.tile_pyramid.tile(zoom, row, col)
return BufferedTile(tile, pixelbuffer=self.pixelbuffer) | def tile(self, zoom, row, col):
"""
Return ``BufferedTile`` object of this ``BufferedTilePyramid``.
Parameters
----------
zoom : integer
zoom level
row : integer
tile matrix row
col : integer
tile matrix column
Returns
-------
buffered tile : ``BufferedTile``
"""
tile = self.tile_pyramid.tile(zoom, row, col)
return BufferedTile(tile, pixelbuffer=self.pixelbuffer) | [
"Return",
"BufferedTile",
"object",
"of",
"this",
"BufferedTilePyramid",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/tile.py#L42-L60 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | BufferedTilePyramid.tiles_from_bounds | Return all tiles intersecting with bounds.
Bounds values will be cleaned if they cross the antimeridian or are
outside of the Northern or Southern tile pyramid bounds.
Parameters
----------
bounds : tuple
(left, bottom, right, top) bounding values in tile pyramid CRS
zoom : integer
zoom level
Yields
------
intersecting tiles : generator
generates ``BufferedTiles`` | mapchete/tile.py | def tiles_from_bounds(self, bounds, zoom):
"""
Return all tiles intersecting with bounds.
Bounds values will be cleaned if they cross the antimeridian or are
outside of the Northern or Southern tile pyramid bounds.
Parameters
----------
bounds : tuple
(left, bottom, right, top) bounding values in tile pyramid CRS
zoom : integer
zoom level
Yields
------
intersecting tiles : generator
generates ``BufferedTiles``
"""
for tile in self.tiles_from_bbox(box(*bounds), zoom):
yield self.tile(*tile.id) | def tiles_from_bounds(self, bounds, zoom):
"""
Return all tiles intersecting with bounds.
Bounds values will be cleaned if they cross the antimeridian or are
outside of the Northern or Southern tile pyramid bounds.
Parameters
----------
bounds : tuple
(left, bottom, right, top) bounding values in tile pyramid CRS
zoom : integer
zoom level
Yields
------
intersecting tiles : generator
generates ``BufferedTiles``
"""
for tile in self.tiles_from_bbox(box(*bounds), zoom):
yield self.tile(*tile.id) | [
"Return",
"all",
"tiles",
"intersecting",
"with",
"bounds",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/tile.py#L62-L82 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | BufferedTilePyramid.tiles_from_bbox | All metatiles intersecting with given bounding box.
Parameters
----------
geometry : ``shapely.geometry``
zoom : integer
zoom level
Yields
------
intersecting tiles : generator
generates ``BufferedTiles`` | mapchete/tile.py | def tiles_from_bbox(self, geometry, zoom):
"""
All metatiles intersecting with given bounding box.
Parameters
----------
geometry : ``shapely.geometry``
zoom : integer
zoom level
Yields
------
intersecting tiles : generator
generates ``BufferedTiles``
"""
for tile in self.tile_pyramid.tiles_from_bbox(geometry, zoom):
yield self.tile(*tile.id) | def tiles_from_bbox(self, geometry, zoom):
"""
All metatiles intersecting with given bounding box.
Parameters
----------
geometry : ``shapely.geometry``
zoom : integer
zoom level
Yields
------
intersecting tiles : generator
generates ``BufferedTiles``
"""
for tile in self.tile_pyramid.tiles_from_bbox(geometry, zoom):
yield self.tile(*tile.id) | [
"All",
"metatiles",
"intersecting",
"with",
"given",
"bounding",
"box",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/tile.py#L84-L100 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | BufferedTilePyramid.tiles_from_geom | Return all tiles intersecting with input geometry.
Parameters
----------
geometry : ``shapely.geometry``
zoom : integer
zoom level
Yields
------
intersecting tiles : ``BufferedTile`` | mapchete/tile.py | def tiles_from_geom(self, geometry, zoom):
"""
Return all tiles intersecting with input geometry.
Parameters
----------
geometry : ``shapely.geometry``
zoom : integer
zoom level
Yields
------
intersecting tiles : ``BufferedTile``
"""
for tile in self.tile_pyramid.tiles_from_geom(geometry, zoom):
yield self.tile(*tile.id) | def tiles_from_geom(self, geometry, zoom):
"""
Return all tiles intersecting with input geometry.
Parameters
----------
geometry : ``shapely.geometry``
zoom : integer
zoom level
Yields
------
intersecting tiles : ``BufferedTile``
"""
for tile in self.tile_pyramid.tiles_from_geom(geometry, zoom):
yield self.tile(*tile.id) | [
"Return",
"all",
"tiles",
"intersecting",
"with",
"input",
"geometry",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/tile.py#L102-L117 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | BufferedTilePyramid.intersecting | Return all BufferedTiles intersecting with tile.
Parameters
----------
tile : ``BufferedTile``
another tile | mapchete/tile.py | def intersecting(self, tile):
"""
Return all BufferedTiles intersecting with tile.
Parameters
----------
tile : ``BufferedTile``
another tile
"""
return [
self.tile(*intersecting_tile.id)
for intersecting_tile in self.tile_pyramid.intersecting(tile)
] | def intersecting(self, tile):
"""
Return all BufferedTiles intersecting with tile.
Parameters
----------
tile : ``BufferedTile``
another tile
"""
return [
self.tile(*intersecting_tile.id)
for intersecting_tile in self.tile_pyramid.intersecting(tile)
] | [
"Return",
"all",
"BufferedTiles",
"intersecting",
"with",
"tile",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/tile.py#L119-L131 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | BufferedTilePyramid.to_dict | Return dictionary representation of pyramid parameters. | mapchete/tile.py | def to_dict(self):
"""
Return dictionary representation of pyramid parameters.
"""
return dict(
grid=self.grid.to_dict(),
metatiling=self.metatiling,
tile_size=self.tile_size,
pixelbuffer=self.pixelbuffer
) | def to_dict(self):
"""
Return dictionary representation of pyramid parameters.
"""
return dict(
grid=self.grid.to_dict(),
metatiling=self.metatiling,
tile_size=self.tile_size,
pixelbuffer=self.pixelbuffer
) | [
"Return",
"dictionary",
"representation",
"of",
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"parameters",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/tile.py#L133-L142 | [
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valid | BufferedTile.get_children | Get tile children (intersecting tiles in next zoom level).
Returns
-------
children : list
a list of ``BufferedTiles`` | mapchete/tile.py | def get_children(self):
"""
Get tile children (intersecting tiles in next zoom level).
Returns
-------
children : list
a list of ``BufferedTiles``
"""
return [BufferedTile(t, self.pixelbuffer) for t in self._tile.get_children()] | def get_children(self):
"""
Get tile children (intersecting tiles in next zoom level).
Returns
-------
children : list
a list of ``BufferedTiles``
"""
return [BufferedTile(t, self.pixelbuffer) for t in self._tile.get_children()] | [
"Get",
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"zoom",
"level",
")",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/tile.py#L239-L248 | [
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valid | BufferedTile.get_neighbors | Return tile neighbors.
Tile neighbors are unique, i.e. in some edge cases, where both the left
and right neighbor wrapped around the antimeridian is the same. Also,
neighbors ouside the northern and southern TilePyramid boundaries are
excluded, because they are invalid.
-------------
| 8 | 1 | 5 |
-------------
| 4 | x | 2 |
-------------
| 7 | 3 | 6 |
-------------
Parameters
----------
connectedness : int
[4 or 8] return four direct neighbors or all eight.
Returns
-------
list of BufferedTiles | mapchete/tile.py | def get_neighbors(self, connectedness=8):
"""
Return tile neighbors.
Tile neighbors are unique, i.e. in some edge cases, where both the left
and right neighbor wrapped around the antimeridian is the same. Also,
neighbors ouside the northern and southern TilePyramid boundaries are
excluded, because they are invalid.
-------------
| 8 | 1 | 5 |
-------------
| 4 | x | 2 |
-------------
| 7 | 3 | 6 |
-------------
Parameters
----------
connectedness : int
[4 or 8] return four direct neighbors or all eight.
Returns
-------
list of BufferedTiles
"""
return [
BufferedTile(t, self.pixelbuffer)
for t in self._tile.get_neighbors(connectedness=connectedness)
] | def get_neighbors(self, connectedness=8):
"""
Return tile neighbors.
Tile neighbors are unique, i.e. in some edge cases, where both the left
and right neighbor wrapped around the antimeridian is the same. Also,
neighbors ouside the northern and southern TilePyramid boundaries are
excluded, because they are invalid.
-------------
| 8 | 1 | 5 |
-------------
| 4 | x | 2 |
-------------
| 7 | 3 | 6 |
-------------
Parameters
----------
connectedness : int
[4 or 8] return four direct neighbors or all eight.
Returns
-------
list of BufferedTiles
"""
return [
BufferedTile(t, self.pixelbuffer)
for t in self._tile.get_neighbors(connectedness=connectedness)
] | [
"Return",
"tile",
"neighbors",
"."
] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/tile.py#L260-L289 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
valid | BufferedTile.is_on_edge | Determine whether tile touches or goes over pyramid edge. | mapchete/tile.py | def is_on_edge(self):
"""Determine whether tile touches or goes over pyramid edge."""
return (
self.left <= self.tile_pyramid.left or # touches_left
self.bottom <= self.tile_pyramid.bottom or # touches_bottom
self.right >= self.tile_pyramid.right or # touches_right
self.top >= self.tile_pyramid.top # touches_top
) | def is_on_edge(self):
"""Determine whether tile touches or goes over pyramid edge."""
return (
self.left <= self.tile_pyramid.left or # touches_left
self.bottom <= self.tile_pyramid.bottom or # touches_bottom
self.right >= self.tile_pyramid.right or # touches_right
self.top >= self.tile_pyramid.top # touches_top
) | [
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] | ungarj/mapchete | python | https://github.com/ungarj/mapchete/blob/d482918d0e66a5b414dff6aa7cc854e01fc60ee4/mapchete/tile.py#L291-L298 | [
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] | d482918d0e66a5b414dff6aa7cc854e01fc60ee4 |
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