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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
cut_to_length
def cut_to_length(text, length, delim): """Shorten given text on first delimiter after given number of characters. """ cut = text.find(delim, length) if cut > -1: return text[:cut] else: return text
python
def cut_to_length(text, length, delim): """Shorten given text on first delimiter after given number of characters. """ cut = text.find(delim, length) if cut > -1: return text[:cut] else: return text
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Shorten given text on first delimiter after given number of characters.
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
get_interpreter_path
def get_interpreter_path(version=None): """Return the executable of a specified or current version.""" if version and version != str(sys.version_info[0]): return settings.PYTHON_INTERPRETER + version else: return sys.executable
python
def get_interpreter_path(version=None): """Return the executable of a specified or current version.""" if version and version != str(sys.version_info[0]): return settings.PYTHON_INTERPRETER + version else: return sys.executable
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
license_from_trove
def license_from_trove(trove): """Finds out license from list of trove classifiers. Args: trove: list of trove classifiers Returns: Fedora name of the package license or empty string, if no licensing information is found in trove classifiers. """ license = [] for classifi...
python
def license_from_trove(trove): """Finds out license from list of trove classifiers. Args: trove: list of trove classifiers Returns: Fedora name of the package license or empty string, if no licensing information is found in trove classifiers. """ license = [] for classifi...
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Finds out license from list of trove classifiers. Args: trove: list of trove classifiers Returns: Fedora name of the package license or empty string, if no licensing information is found in trove classifiers.
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
versions_from_trove
def versions_from_trove(trove): """Finds out python version from list of trove classifiers. Args: trove: list of trove classifiers Returns: python version string """ versions = set() for classifier in trove: if 'Programming Language :: Python ::' in classifier: ...
python
def versions_from_trove(trove): """Finds out python version from list of trove classifiers. Args: trove: list of trove classifiers Returns: python version string """ versions = set() for classifier in trove: if 'Programming Language :: Python ::' in classifier: ...
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
pypi_metadata_extension
def pypi_metadata_extension(extraction_fce): """Extracts data from PyPI and merges them with data from extraction method. """ def inner(self, client=None): data = extraction_fce(self) if client is None: logger.warning("Client is None, it was probably disabled") d...
python
def pypi_metadata_extension(extraction_fce): """Extracts data from PyPI and merges them with data from extraction method. """ def inner(self, client=None): data = extraction_fce(self) if client is None: logger.warning("Client is None, it was probably disabled") d...
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train
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
venv_metadata_extension
def venv_metadata_extension(extraction_fce): """Extracts specific metadata from virtualenv object, merges them with data from given extraction method. """ def inner(self): data = extraction_fce(self) if virtualenv is None or not self.venv: logger.debug("Skipping virtualenv m...
python
def venv_metadata_extension(extraction_fce): """Extracts specific metadata from virtualenv object, merges them with data from given extraction method. """ def inner(self): data = extraction_fce(self) if virtualenv is None or not self.venv: logger.debug("Skipping virtualenv m...
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Extracts specific metadata from virtualenv object, merges them with data from given extraction method.
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train
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
process_description
def process_description(description_fce): """Removes special character delimiters, titles and wraps paragraphs. """ def inner(description): clear_description = \ re.sub(r'\s+', ' ', # multiple whitespaces # general URLs re.sub(r'\w+:\/{2}[\d\w-]+(\.[\d\w-]+)*...
python
def process_description(description_fce): """Removes special character delimiters, titles and wraps paragraphs. """ def inner(description): clear_description = \ re.sub(r'\s+', ' ', # multiple whitespaces # general URLs re.sub(r'\w+:\/{2}[\d\w-]+(\.[\d\w-]+)*...
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train
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
LocalMetadataExtractor.versions_from_archive
def versions_from_archive(self): """Return Python versions extracted from trove classifiers. """ py_vers = versions_from_trove(self.classifiers) return [ver for ver in py_vers if ver != self.unsupported_version]
python
def versions_from_archive(self): """Return Python versions extracted from trove classifiers. """ py_vers = versions_from_trove(self.classifiers) return [ver for ver in py_vers if ver != self.unsupported_version]
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
LocalMetadataExtractor.srcname
def srcname(self): """Return srcname for the macro if the pypi name should be changed. Those cases are: - name was provided with -r option - pypi name is like python-<name> """ if self.rpm_name or self.name.startswith(('python-', 'Python-')): return self.name...
python
def srcname(self): """Return srcname for the macro if the pypi name should be changed. Those cases are: - name was provided with -r option - pypi name is like python-<name> """ if self.rpm_name or self.name.startswith(('python-', 'Python-')): return self.name...
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
LocalMetadataExtractor.extract_data
def extract_data(self): """Extracts data from archive. Returns: PackageData object containing the extracted data. """ data = PackageData( local_file=self.local_file, name=self.name, pkg_name=self.rpm_name or self.name_convertor.rpm_name( ...
python
def extract_data(self): """Extracts data from archive. Returns: PackageData object containing the extracted data. """ data = PackageData( local_file=self.local_file, name=self.name, pkg_name=self.rpm_name or self.name_convertor.rpm_name( ...
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
LocalMetadataExtractor.data_from_archive
def data_from_archive(self): """Returns all metadata extractable from the archive. Returns: dictionary containing metadata extracted from the archive """ archive_data = {} archive_data['runtime_deps'] = self.runtime_deps archive_data['build_deps'] = [ ...
python
def data_from_archive(self): """Returns all metadata extractable from the archive. Returns: dictionary containing metadata extracted from the archive """ archive_data = {} archive_data['runtime_deps'] = self.runtime_deps archive_data['build_deps'] = [ ...
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
SetupPyMetadataExtractor.runtime_deps
def runtime_deps(self): # install_requires """Returns list of runtime dependencies of the package specified in setup.py. Dependencies are in RPM SPECFILE format - see dependency_to_rpm() for details, but names are already transformed according to current distro. Return...
python
def runtime_deps(self): # install_requires """Returns list of runtime dependencies of the package specified in setup.py. Dependencies are in RPM SPECFILE format - see dependency_to_rpm() for details, but names are already transformed according to current distro. Return...
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
SetupPyMetadataExtractor.build_deps
def build_deps(self): # setup_requires [tests_require, install_requires] """Same as runtime_deps, but build dependencies. Test and install requires are included if package contains test suite to prevent %check phase crashes because of missing dependencies Returns: list of b...
python
def build_deps(self): # setup_requires [tests_require, install_requires] """Same as runtime_deps, but build dependencies. Test and install requires are included if package contains test suite to prevent %check phase crashes because of missing dependencies Returns: list of b...
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
SetupPyMetadataExtractor.doc_files
def doc_files(self): """Returns list of doc files that should be used for %doc in specfile. Returns: List of doc files from the archive - only basenames, not full paths. """ doc_files = [] for doc_file_re in settings.DOC_FILES_RE: doc_files.ext...
python
def doc_files(self): """Returns list of doc files that should be used for %doc in specfile. Returns: List of doc files from the archive - only basenames, not full paths. """ doc_files = [] for doc_file_re in settings.DOC_FILES_RE: doc_files.ext...
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
SetupPyMetadataExtractor.sphinx_dir
def sphinx_dir(self): """Returns directory with sphinx documentation, if there is such. Returns: Full path to sphinx documentation dir inside the archive, or None if there is no such. """ # search for sphinx dir doc/ or docs/ under the first directory in #...
python
def sphinx_dir(self): """Returns directory with sphinx documentation, if there is such. Returns: Full path to sphinx documentation dir inside the archive, or None if there is no such. """ # search for sphinx dir doc/ or docs/ under the first directory in #...
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Returns directory with sphinx documentation, if there is such. Returns: Full path to sphinx documentation dir inside the archive, or None if there is no such.
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
SetupPyMetadataExtractor.data_from_archive
def data_from_archive(self): """Appends setup.py specific metadata to archive_data.""" archive_data = super(SetupPyMetadataExtractor, self).data_from_archive archive_data['has_packages'] = self.has_packages archive_data['packages'] = self.packages archive_data['has_bundled_egg_...
python
def data_from_archive(self): """Appends setup.py specific metadata to archive_data.""" archive_data = super(SetupPyMetadataExtractor, self).data_from_archive archive_data['has_packages'] = self.has_packages archive_data['packages'] = self.packages archive_data['has_bundled_egg_...
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fedora-python/pyp2rpm
pyp2rpm/metadata_extractors.py
WheelMetadataExtractor.get_requires
def get_requires(self, requires_types): """Extracts requires of given types from metadata file, filter windows specific requires. """ if not isinstance(requires_types, list): requires_types = list(requires_types) extracted_requires = [] for requires_name in re...
python
def get_requires(self, requires_types): """Extracts requires of given types from metadata file, filter windows specific requires. """ if not isinstance(requires_types, list): requires_types = list(requires_types) extracted_requires = [] for requires_name in re...
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Extracts requires of given types from metadata file, filter windows specific requires.
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fedora-python/pyp2rpm
pyp2rpm/package_getters.py
get_url
def get_url(client, name, version, wheel=False, hashed_format=False): """Retrieves list of package URLs using PyPI's XML-RPC. Chooses URL of prefered archive and md5_digest. """ try: release_urls = client.release_urls(name, version) release_data = client.release_data(name, version) e...
python
def get_url(client, name, version, wheel=False, hashed_format=False): """Retrieves list of package URLs using PyPI's XML-RPC. Chooses URL of prefered archive and md5_digest. """ try: release_urls = client.release_urls(name, version) release_data = client.release_data(name, version) e...
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Retrieves list of package URLs using PyPI's XML-RPC. Chooses URL of prefered archive and md5_digest.
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fedora-python/pyp2rpm
pyp2rpm/package_getters.py
PypiDownloader.get
def get(self, wheel=False): """Downloads the package from PyPI. Returns: Full path of the downloaded file. Raises: PermissionError if the save_dir is not writable. """ try: url = get_url(self.client, self.name, self.version, ...
python
def get(self, wheel=False): """Downloads the package from PyPI. Returns: Full path of the downloaded file. Raises: PermissionError if the save_dir is not writable. """ try: url = get_url(self.client, self.name, self.version, ...
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Downloads the package from PyPI. Returns: Full path of the downloaded file. Raises: PermissionError if the save_dir is not writable.
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https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/package_getters.py#L152-L173
fedora-python/pyp2rpm
pyp2rpm/package_getters.py
LocalFileGetter.get
def get(self): """Copies file from local filesystem to self.save_dir. Returns: Full path of the copied file. Raises: EnvironmentError if the file can't be found or the save_dir is not writable. """ if self.local_file.endswith('.whl'): ...
python
def get(self): """Copies file from local filesystem to self.save_dir. Returns: Full path of the copied file. Raises: EnvironmentError if the file can't be found or the save_dir is not writable. """ if self.local_file.endswith('.whl'): ...
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https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/package_getters.py#L190-L212
fedora-python/pyp2rpm
pyp2rpm/package_getters.py
LocalFileGetter._stripped_name_version
def _stripped_name_version(self): """Returns filename stripped of the suffix. Returns: Filename stripped of the suffix (extension). """ # we don't use splitext, because on "a.tar.gz" it returns ("a.tar", # "gz") filename = os.path.basename(self.local_file) ...
python
def _stripped_name_version(self): """Returns filename stripped of the suffix. Returns: Filename stripped of the suffix (extension). """ # we don't use splitext, because on "a.tar.gz" it returns ("a.tar", # "gz") filename = os.path.basename(self.local_file) ...
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Returns filename stripped of the suffix. Returns: Filename stripped of the suffix (extension).
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/package_getters.py#L215-L229
fedora-python/pyp2rpm
pyp2rpm/virtualenv.py
DirsContent.fill
def fill(self, path): ''' Scans content of directories ''' self.bindir = set(os.listdir(path + 'bin/')) self.lib_sitepackages = set(os.listdir(glob.glob( path + 'lib/python?.?/site-packages/')[0]))
python
def fill(self, path): ''' Scans content of directories ''' self.bindir = set(os.listdir(path + 'bin/')) self.lib_sitepackages = set(os.listdir(glob.glob( path + 'lib/python?.?/site-packages/')[0]))
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https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/virtualenv.py#L39-L45
fedora-python/pyp2rpm
pyp2rpm/virtualenv.py
VirtualEnv.install_package_to_venv
def install_package_to_venv(self): ''' Installs package given as first argument to virtualenv without dependencies ''' try: self.env.install(self.name, force=True, options=["--no-deps"]) except (ve.PackageInstallationException, ve.VirtualenvRea...
python
def install_package_to_venv(self): ''' Installs package given as first argument to virtualenv without dependencies ''' try: self.env.install(self.name, force=True, options=["--no-deps"]) except (ve.PackageInstallationException, ve.VirtualenvRea...
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https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/virtualenv.py#L81-L92
fedora-python/pyp2rpm
pyp2rpm/virtualenv.py
VirtualEnv.get_dirs_differance
def get_dirs_differance(self): ''' Makes final versions of site_packages and scripts using DirsContent sub method and filters ''' try: diff = self.dirs_after_install - self.dirs_before_install except ValueError: raise VirtualenvFailException( ...
python
def get_dirs_differance(self): ''' Makes final versions of site_packages and scripts using DirsContent sub method and filters ''' try: diff = self.dirs_after_install - self.dirs_before_install except ValueError: raise VirtualenvFailException( ...
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https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/virtualenv.py#L94-L115
fedora-python/pyp2rpm
pyp2rpm/bin.py
main
def main(package, v, d, s, r, proxy, srpm, p, b, o, t, venv, autonc, sclize, **scl_kwargs): """Convert PyPI package to RPM specfile or SRPM. \b \b\bArguments: PACKAGE Provide PyPI name of the package or path to compressed source file. """ register_fi...
python
def main(package, v, d, s, r, proxy, srpm, p, b, o, t, venv, autonc, sclize, **scl_kwargs): """Convert PyPI package to RPM specfile or SRPM. \b \b\bArguments: PACKAGE Provide PyPI name of the package or path to compressed source file. """ register_fi...
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fedora-python/pyp2rpm
pyp2rpm/bin.py
convert_to_scl
def convert_to_scl(spec, scl_options): """Convert spec into SCL-style spec file using `spec2scl`. Args: spec: (str) a spec file scl_options: (dict) SCL options provided Returns: A converted spec file """ scl_options['skip_functions'] = scl_options['skip_functions'].split(','...
python
def convert_to_scl(spec, scl_options): """Convert spec into SCL-style spec file using `spec2scl`. Args: spec: (str) a spec file scl_options: (dict) SCL options provided Returns: A converted spec file """ scl_options['skip_functions'] = scl_options['skip_functions'].split(','...
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Convert spec into SCL-style spec file using `spec2scl`. Args: spec: (str) a spec file scl_options: (dict) SCL options provided Returns: A converted spec file
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fedora-python/pyp2rpm
pyp2rpm/bin.py
Pyp2rpmCommand.format_options
def format_options(self, ctx, formatter): """Writes SCL related options into the formatter as a separate group. """ super(Pyp2rpmCommand, self).format_options(ctx, formatter) scl_opts = [] for param in self.get_params(ctx): if isinstance(param, SclizeOption): ...
python
def format_options(self, ctx, formatter): """Writes SCL related options into the formatter as a separate group. """ super(Pyp2rpmCommand, self).format_options(ctx, formatter) scl_opts = [] for param in self.get_params(ctx): if isinstance(param, SclizeOption): ...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/bin.py#L32-L44
fedora-python/pyp2rpm
pyp2rpm/bin.py
SclizeOption.handle_parse_result
def handle_parse_result(self, ctx, opts, args): """Validate SCL related options before parsing.""" if 'sclize' in opts and not SclConvertor: raise click.UsageError("Please install spec2scl package to " "perform SCL-style conversion") if self.name in...
python
def handle_parse_result(self, ctx, opts, args): """Validate SCL related options before parsing.""" if 'sclize' in opts and not SclConvertor: raise click.UsageError("Please install spec2scl package to " "perform SCL-style conversion") if self.name in...
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train
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fedora-python/pyp2rpm
pyp2rpm/command/extract_dist.py
to_list
def to_list(var): """Checks if given value is a list, tries to convert, if it is not.""" if var is None: return [] if isinstance(var, str): var = var.split('\n') elif not isinstance(var, list): try: var = list(var) except TypeError: raise ValueErro...
python
def to_list(var): """Checks if given value is a list, tries to convert, if it is not.""" if var is None: return [] if isinstance(var, str): var = var.split('\n') elif not isinstance(var, list): try: var = list(var) except TypeError: raise ValueErro...
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https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/command/extract_dist.py#L75-L86
fedora-python/pyp2rpm
pyp2rpm/command/extract_dist.py
extract_dist.run
def run(self): """Sends extracted metadata in json format to stdout if stdout option is specified, assigns metadata dictionary to class_metadata variable otherwise. """ if self.stdout: sys.stdout.write("extracted json data:\n" + json.dumps( self.metada...
python
def run(self): """Sends extracted metadata in json format to stdout if stdout option is specified, assigns metadata dictionary to class_metadata variable otherwise. """ if self.stdout: sys.stdout.write("extracted json data:\n" + json.dumps( self.metada...
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fedora-python/pyp2rpm
pyp2rpm/dependency_parser.py
dependency_to_rpm
def dependency_to_rpm(dep, runtime): """Converts a dependency got by pkg_resources.Requirement.parse() to RPM format. Args: dep - a dependency retrieved by pkg_resources.Requirement.parse() runtime - whether the returned dependency should be runtime (True) or build time (False) R...
python
def dependency_to_rpm(dep, runtime): """Converts a dependency got by pkg_resources.Requirement.parse() to RPM format. Args: dep - a dependency retrieved by pkg_resources.Requirement.parse() runtime - whether the returned dependency should be runtime (True) or build time (False) R...
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fedora-python/pyp2rpm
pyp2rpm/dependency_parser.py
deps_from_pyp_format
def deps_from_pyp_format(requires, runtime=True): """Parses dependencies extracted from setup.py. Args: requires: list of dependencies as written in setup.py of the package. runtime: are the dependencies runtime (True) or build time (False)? Returns: List of semi-SPECFILE dependencie...
python
def deps_from_pyp_format(requires, runtime=True): """Parses dependencies extracted from setup.py. Args: requires: list of dependencies as written in setup.py of the package. runtime: are the dependencies runtime (True) or build time (False)? Returns: List of semi-SPECFILE dependencie...
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fedora-python/pyp2rpm
pyp2rpm/dependency_parser.py
deps_from_pydit_json
def deps_from_pydit_json(requires, runtime=True): """Parses dependencies returned by pydist.json, since versions uses brackets we can't use pkg_resources to parse and we need a separate method Args: requires: list of dependencies as written in pydist.json of the package runtime: are the ...
python
def deps_from_pydit_json(requires, runtime=True): """Parses dependencies returned by pydist.json, since versions uses brackets we can't use pkg_resources to parse and we need a separate method Args: requires: list of dependencies as written in pydist.json of the package runtime: are the ...
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fedora-python/pyp2rpm
pyp2rpm/package_data.py
PackageData.get_changelog_date_packager
def get_changelog_date_packager(self): """Returns part of the changelog entry, containing date and packager. """ try: packager = subprocess.Popen( 'rpmdev-packager', stdout=subprocess.PIPE).communicate( )[0].strip() except OSError: ...
python
def get_changelog_date_packager(self): """Returns part of the changelog entry, containing date and packager. """ try: packager = subprocess.Popen( 'rpmdev-packager', stdout=subprocess.PIPE).communicate( )[0].strip() except OSError: ...
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fedora-python/pyp2rpm
pyp2rpm/module_runners.py
RunpyModuleRunner.run
def run(self): """Executes the code of the specified module.""" with utils.ChangeDir(self.dirname): sys.path.insert(0, self.dirname) sys.argv[1:] = self.args runpy.run_module(self.not_suffixed(self.filename), run_name='__main__', ...
python
def run(self): """Executes the code of the specified module.""" with utils.ChangeDir(self.dirname): sys.path.insert(0, self.dirname) sys.argv[1:] = self.args runpy.run_module(self.not_suffixed(self.filename), run_name='__main__', ...
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train
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fedora-python/pyp2rpm
pyp2rpm/module_runners.py
SubprocessModuleRunner.run
def run(self, interpreter): """Executes the code of the specified module. Deserializes captured json data. """ with utils.ChangeDir(self.dirname): command_list = ['PYTHONPATH=' + main_dir, interpreter, self.filename] + list(self.args) t...
python
def run(self, interpreter): """Executes the code of the specified module. Deserializes captured json data. """ with utils.ChangeDir(self.dirname): command_list = ['PYTHONPATH=' + main_dir, interpreter, self.filename] + list(self.args) t...
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fedora-python/pyp2rpm
pyp2rpm/archive.py
generator_to_list
def generator_to_list(fn): """This decorator is for flat_list function. It converts returned generator to list. """ def wrapper(*args, **kw): return list(fn(*args, **kw)) return wrapper
python
def generator_to_list(fn): """This decorator is for flat_list function. It converts returned generator to list. """ def wrapper(*args, **kw): return list(fn(*args, **kw)) return wrapper
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This decorator is for flat_list function. It converts returned generator to list.
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fedora-python/pyp2rpm
pyp2rpm/archive.py
flat_list
def flat_list(lst): """This function flatten given nested list. Argument: nested list Returns: flat list """ if isinstance(lst, list): for item in lst: for i in flat_list(item): yield i else: yield lst
python
def flat_list(lst): """This function flatten given nested list. Argument: nested list Returns: flat list """ if isinstance(lst, list): for item in lst: for i in flat_list(item): yield i else: yield lst
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L27-L39
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.extractor_cls
def extractor_cls(self): """Returns the class that can read this archive based on archive suffix. Returns: Class that can read this archive or None if no such exists. """ file_cls = None # only catches ".gz", even from ".tar.gz" if self.is_tar: fi...
python
def extractor_cls(self): """Returns the class that can read this archive based on archive suffix. Returns: Class that can read this archive or None if no such exists. """ file_cls = None # only catches ".gz", even from ".tar.gz" if self.is_tar: fi...
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Returns the class that can read this archive based on archive suffix. Returns: Class that can read this archive or None if no such exists.
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L127-L143
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.get_content_of_file
def get_content_of_file(self, name, full_path=False): """Returns content of file from archive. If full_path is set to False and two files with given name exist, content of one is returned (it is not specified which one that is). If set to True, returns content of exactly that file. ...
python
def get_content_of_file(self, name, full_path=False): """Returns content of file from archive. If full_path is set to False and two files with given name exist, content of one is returned (it is not specified which one that is). If set to True, returns content of exactly that file. ...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L147-L168
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.extract_file
def extract_file(self, name, full_path=False, directory="."): """Extract a member from the archive to the specified working directory. Behaviour of name and pull_path is the same as in function get_content_of_file. """ if self.handle: for member in self.handle.getmemb...
python
def extract_file(self, name, full_path=False, directory="."): """Extract a member from the archive to the specified working directory. Behaviour of name and pull_path is the same as in function get_content_of_file. """ if self.handle: for member in self.handle.getmemb...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L170-L181
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.extract_all
def extract_all(self, directory=".", members=None): """Extract all member from the archive to the specified working directory. """ if self.handle: self.handle.extractall(path=directory, members=members)
python
def extract_all(self, directory=".", members=None): """Extract all member from the archive to the specified working directory. """ if self.handle: self.handle.extractall(path=directory, members=members)
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L183-L188
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.has_file_with_suffix
def has_file_with_suffix(self, suffixes): """Finds out if there is a file with one of suffixes in the archive. Args: suffixes: list of suffixes or single suffix to look for Returns: True if there is at least one file with at least one given suffix in the archi...
python
def has_file_with_suffix(self, suffixes): """Finds out if there is a file with one of suffixes in the archive. Args: suffixes: list of suffixes or single suffix to look for Returns: True if there is at least one file with at least one given suffix in the archi...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L191-L213
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.get_files_re
def get_files_re(self, file_re, full_path=False, ignorecase=False): """Finds all files that match file_re and returns their list. Doesn't return directories, only files. Args: file_re: raw string to match files against (gets compiled into re) full_path: whether to match ...
python
def get_files_re(self, file_re, full_path=False, ignorecase=False): """Finds all files that match file_re and returns their list. Doesn't return directories, only files. Args: file_re: raw string to match files against (gets compiled into re) full_path: whether to match ...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L215-L248
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.get_directories_re
def get_directories_re( self, directory_re, full_path=False, ignorecase=False): """Same as get_files_re, but for directories""" if ignorecase: compiled_re = re.compile(directory_re, re.I) else: compiled_re = re.compile(direc...
python
def get_directories_re( self, directory_re, full_path=False, ignorecase=False): """Same as get_files_re, but for directories""" if ignorecase: compiled_re = re.compile(directory_re, re.I) else: compiled_re = re.compile(direc...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L250-L279
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.top_directory
def top_directory(self): """Return the name of the archive topmost directory.""" if self.handle: return os.path.commonprefix(self.handle.getnames()).rstrip('/')
python
def top_directory(self): """Return the name of the archive topmost directory.""" if self.handle: return os.path.commonprefix(self.handle.getnames()).rstrip('/')
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L282-L285
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.json_wheel_metadata
def json_wheel_metadata(self): """Simple getter that get content of metadata.json file in .whl archive Returns: metadata from metadata.json or pydist.json in json format """ for meta_file in ("metadata.json", "pydist.json"): try: return json.loads(...
python
def json_wheel_metadata(self): """Simple getter that get content of metadata.json file in .whl archive Returns: metadata from metadata.json or pydist.json in json format """ for meta_file in ("metadata.json", "pydist.json"): try: return json.loads(...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/archive.py#L288-L305
fedora-python/pyp2rpm
pyp2rpm/archive.py
Archive.record
def record(self): """Getter that get content of RECORD file in .whl archive Returns: dict with keys `modules` and `scripts` """ modules = [] scripts = [] if self.get_content_of_file('RECORD'): lines = self.get_content_of_file('RECORD').splitlines(...
python
def record(self): """Getter that get content of RECORD file in .whl archive Returns: dict with keys `modules` and `scripts` """ modules = [] scripts = [] if self.get_content_of_file('RECORD'): lines = self.get_content_of_file('RECORD').splitlines(...
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fedora-python/pyp2rpm
pyp2rpm/name_convertor.py
NameConvertor.rpm_versioned_name
def rpm_versioned_name(cls, name, version, default_number=False): """Properly versions the name. For example: rpm_versioned_name('python-foo', '26') will return python26-foo rpm_versioned_name('pyfoo, '3') will return python3-pyfoo If version is same as settings.DEFAULT_PYTHON_V...
python
def rpm_versioned_name(cls, name, version, default_number=False): """Properly versions the name. For example: rpm_versioned_name('python-foo', '26') will return python26-foo rpm_versioned_name('pyfoo, '3') will return python3-pyfoo If version is same as settings.DEFAULT_PYTHON_V...
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Properly versions the name. For example: rpm_versioned_name('python-foo', '26') will return python26-foo rpm_versioned_name('pyfoo, '3') will return python3-pyfoo If version is same as settings.DEFAULT_PYTHON_VERSION, no change is done. Args: name: name to v...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/name_convertor.py#L36-L81
fedora-python/pyp2rpm
pyp2rpm/name_convertor.py
NameConvertor.rpm_name
def rpm_name(self, name, python_version=None, pkg_name=False): """Returns name of the package converted to (possibly) correct package name according to Packaging Guidelines. Args: name: name to convert python_version: python version for which to retrieve the name of ...
python
def rpm_name(self, name, python_version=None, pkg_name=False): """Returns name of the package converted to (possibly) correct package name according to Packaging Guidelines. Args: name: name to convert python_version: python version for which to retrieve the name of ...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/name_convertor.py#L83-L106
fedora-python/pyp2rpm
pyp2rpm/name_convertor.py
NameConvertor.base_name
def base_name(self, name): """Removes any python prefixes of suffixes from name if present.""" base_name = name.replace('.', "-") # remove python prefix if present found_prefix = self.reg_start.search(name) if found_prefix: base_name = found_prefix.group(2) #...
python
def base_name(self, name): """Removes any python prefixes of suffixes from name if present.""" base_name = name.replace('.', "-") # remove python prefix if present found_prefix = self.reg_start.search(name) if found_prefix: base_name = found_prefix.group(2) #...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/name_convertor.py#L108-L121
fedora-python/pyp2rpm
pyp2rpm/name_convertor.py
NameVariants.merge
def merge(self, other): """Merges object with other NameVariants object, not set values of self.variants are replace by values from other object. """ if not isinstance(other, NameVariants): raise TypeError("NameVariants isinstance can be merge with" ...
python
def merge(self, other): """Merges object with other NameVariants object, not set values of self.variants are replace by values from other object. """ if not isinstance(other, NameVariants): raise TypeError("NameVariants isinstance can be merge with" ...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/name_convertor.py#L144-L154
fedora-python/pyp2rpm
pyp2rpm/name_convertor.py
DandifiedNameConvertor.rpm_name
def rpm_name(self, name, python_version=None, pkg_name=False): """Checks if name converted using superclass rpm_name_method match name of package in the query. Searches for correct name if it doesn't. Args: name: name to convert python_version: python version for which to...
python
def rpm_name(self, name, python_version=None, pkg_name=False): """Checks if name converted using superclass rpm_name_method match name of package in the query. Searches for correct name if it doesn't. Args: name: name to convert python_version: python version for which to...
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fedora-python/pyp2rpm
pyp2rpm/convertor.py
Convertor.merge_versions
def merge_versions(self, data): """Merges python versions specified in command lines options with extracted versions, checks if some of the versions is not > 2 if EPEL6 template will be used. attributes base_python_version and python_versions contain values specified by command line opti...
python
def merge_versions(self, data): """Merges python versions specified in command lines options with extracted versions, checks if some of the versions is not > 2 if EPEL6 template will be used. attributes base_python_version and python_versions contain values specified by command line opti...
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train
https://github.com/fedora-python/pyp2rpm/blob/853eb3d226689a5ccdcdb9358b1a3394fafbd2b5/pyp2rpm/convertor.py#L81-L123
fedora-python/pyp2rpm
pyp2rpm/convertor.py
Convertor.convert
def convert(self): """Returns RPM SPECFILE. Returns: rendered RPM SPECFILE. """ # move file into position try: local_file = self.getter.get() except (exceptions.NoSuchPackageException, OSError) as e: logger.error( "Faile...
python
def convert(self): """Returns RPM SPECFILE. Returns: rendered RPM SPECFILE. """ # move file into position try: local_file = self.getter.get() except (exceptions.NoSuchPackageException, OSError) as e: logger.error( "Faile...
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Returns RPM SPECFILE. Returns: rendered RPM SPECFILE.
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train
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fedora-python/pyp2rpm
pyp2rpm/convertor.py
Convertor.getter
def getter(self): """Returns an instance of proper PackageGetter subclass. Always returns the same instance. Returns: Instance of the proper PackageGetter subclass according to provided argument. Raises: NoSuchSourceException if source to get the pack...
python
def getter(self): """Returns an instance of proper PackageGetter subclass. Always returns the same instance. Returns: Instance of the proper PackageGetter subclass according to provided argument. Raises: NoSuchSourceException if source to get the pack...
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fedora-python/pyp2rpm
pyp2rpm/convertor.py
Convertor.metadata_extractor
def metadata_extractor(self): """Returns an instance of proper MetadataExtractor subclass. Always returns the same instance. Returns: The proper MetadataExtractor subclass according to local file suffix. """ if not hasattr(self, '_local_file'): ...
python
def metadata_extractor(self): """Returns an instance of proper MetadataExtractor subclass. Always returns the same instance. Returns: The proper MetadataExtractor subclass according to local file suffix. """ if not hasattr(self, '_local_file'): ...
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fedora-python/pyp2rpm
pyp2rpm/convertor.py
Convertor.client
def client(self): """XMLRPC client for PyPI. Always returns the same instance. If the package is provided as a path to compressed source file, PyPI will not be used and the client will not be instantiated. Returns: XMLRPC client for PyPI or None. """ if self...
python
def client(self): """XMLRPC client for PyPI. Always returns the same instance. If the package is provided as a path to compressed source file, PyPI will not be used and the client will not be instantiated. Returns: XMLRPC client for PyPI or None. """ if self...
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fedora-python/pyp2rpm
pyp2rpm/utils.py
memoize_by_args
def memoize_by_args(func): """Memoizes return value of a func based on args.""" memory = {} @functools.wraps(func) def memoized(*args): if args not in memory.keys(): value = func(*args) memory[args] = value return memory[args] return memoized
python
def memoize_by_args(func): """Memoizes return value of a func based on args.""" memory = {} @functools.wraps(func) def memoized(*args): if args not in memory.keys(): value = func(*args) memory[args] = value return memory[args] return memoized
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fedora-python/pyp2rpm
pyp2rpm/utils.py
build_srpm
def build_srpm(specfile, save_dir): """Builds a srpm from given specfile using rpmbuild. Generated srpm is stored in directory specified by save_dir. Args: specfile: path to a specfile save_dir: path to source and build tree """ logger.info('Starting rpmbuild to build: {0} SRPM.'.fo...
python
def build_srpm(specfile, save_dir): """Builds a srpm from given specfile using rpmbuild. Generated srpm is stored in directory specified by save_dir. Args: specfile: path to a specfile save_dir: path to source and build tree """ logger.info('Starting rpmbuild to build: {0} SRPM.'.fo...
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fedora-python/pyp2rpm
pyp2rpm/utils.py
remove_major_minor_suffix
def remove_major_minor_suffix(scripts): """Checks if executables already contain a "-MAJOR.MINOR" suffix. """ minor_major_regex = re.compile("-\d.?\d?$") return [x for x in scripts if not minor_major_regex.search(x)]
python
def remove_major_minor_suffix(scripts): """Checks if executables already contain a "-MAJOR.MINOR" suffix. """ minor_major_regex = re.compile("-\d.?\d?$") return [x for x in scripts if not minor_major_regex.search(x)]
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fedora-python/pyp2rpm
pyp2rpm/utils.py
runtime_to_build
def runtime_to_build(runtime_deps): """Adds all runtime deps to build deps""" build_deps = copy.deepcopy(runtime_deps) for dep in build_deps: if len(dep) > 0: dep[0] = 'BuildRequires' return build_deps
python
def runtime_to_build(runtime_deps): """Adds all runtime deps to build deps""" build_deps = copy.deepcopy(runtime_deps) for dep in build_deps: if len(dep) > 0: dep[0] = 'BuildRequires' return build_deps
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fedora-python/pyp2rpm
pyp2rpm/utils.py
unique_deps
def unique_deps(deps): """Remove duplicities from deps list of the lists""" deps.sort() return list(k for k, _ in itertools.groupby(deps))
python
def unique_deps(deps): """Remove duplicities from deps list of the lists""" deps.sort() return list(k for k, _ in itertools.groupby(deps))
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fedora-python/pyp2rpm
pyp2rpm/utils.py
c_time_locale
def c_time_locale(): """Context manager with C LC_TIME locale""" old_time_locale = locale.getlocale(locale.LC_TIME) locale.setlocale(locale.LC_TIME, 'C') yield locale.setlocale(locale.LC_TIME, old_time_locale)
python
def c_time_locale(): """Context manager with C LC_TIME locale""" old_time_locale = locale.getlocale(locale.LC_TIME) locale.setlocale(locale.LC_TIME, 'C') yield locale.setlocale(locale.LC_TIME, old_time_locale)
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fedora-python/pyp2rpm
pyp2rpm/utils.py
rpm_eval
def rpm_eval(macro): """Get value of given macro using rpm tool""" try: value = subprocess.Popen( ['rpm', '--eval', macro], stdout=subprocess.PIPE).communicate()[0].strip() except OSError: logger.error('Failed to get value of {0} rpm macro'.format( macro),...
python
def rpm_eval(macro): """Get value of given macro using rpm tool""" try: value = subprocess.Popen( ['rpm', '--eval', macro], stdout=subprocess.PIPE).communicate()[0].strip() except OSError: logger.error('Failed to get value of {0} rpm macro'.format( macro),...
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fedora-python/pyp2rpm
pyp2rpm/utils.py
get_default_save_path
def get_default_save_path(): """Return default save path for the packages""" macro = '%{_topdir}' if rpm: save_path = rpm.expandMacro(macro) else: save_path = rpm_eval(macro) if not save_path: logger.warn("rpm tools are missing, using default save path " ...
python
def get_default_save_path(): """Return default save path for the packages""" macro = '%{_topdir}' if rpm: save_path = rpm.expandMacro(macro) else: save_path = rpm_eval(macro) if not save_path: logger.warn("rpm tools are missing, using default save path " ...
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
check_and_get_data
def check_and_get_data(input_list,**pars): """Verify that all specified files are present. If not, retrieve them from MAST. Parameters ---------- input_list : list List of one or more calibrated fits images that will be used for catalog generation. Returns ======= total_input_list:...
python
def check_and_get_data(input_list,**pars): """Verify that all specified files are present. If not, retrieve them from MAST. Parameters ---------- input_list : list List of one or more calibrated fits images that will be used for catalog generation. Returns ======= total_input_list:...
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Verify that all specified files are present. If not, retrieve them from MAST. Parameters ---------- input_list : list List of one or more calibrated fits images that will be used for catalog generation. Returns ======= total_input_list: list list of full filenames
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
perform_align
def perform_align(input_list, **kwargs): """Main calling function. Parameters ---------- input_list : list List of one or more IPPSSOOTs (rootnames) to align. archive : Boolean Retain copies of the downloaded files in the astroquery created sub-directories? clobber : Boolean ...
python
def perform_align(input_list, **kwargs): """Main calling function. Parameters ---------- input_list : list List of one or more IPPSSOOTs (rootnames) to align. archive : Boolean Retain copies of the downloaded files in the astroquery created sub-directories? clobber : Boolean ...
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
match_relative_fit
def match_relative_fit(imglist, reference_catalog): """Perform cross-matching and final fit using 2dHistogram matching Parameters ---------- imglist : list List of input image `~tweakwcs.tpwcs.FITSWCS` objects with metadata and source catalogs reference_catalog : Table Astropy Tabl...
python
def match_relative_fit(imglist, reference_catalog): """Perform cross-matching and final fit using 2dHistogram matching Parameters ---------- imglist : list List of input image `~tweakwcs.tpwcs.FITSWCS` objects with metadata and source catalogs reference_catalog : Table Astropy Tabl...
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
match_default_fit
def match_default_fit(imglist, reference_catalog): """Perform cross-matching and final fit using 2dHistogram matching Parameters ---------- imglist : list List of input image `~tweakwcs.tpwcs.FITSWCS` objects with metadata and source catalogs reference_catalog : Table Astropy Table...
python
def match_default_fit(imglist, reference_catalog): """Perform cross-matching and final fit using 2dHistogram matching Parameters ---------- imglist : list List of input image `~tweakwcs.tpwcs.FITSWCS` objects with metadata and source catalogs reference_catalog : Table Astropy Table...
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
determine_fit_quality
def determine_fit_quality(imglist,filteredTable, print_fit_parameters=True): """Determine the quality of the fit to the data Parameters ---------- imglist : list output of interpret_fits. Contains sourcelist tables, newly computed WCS info, etc. for every chip of every valid input image...
python
def determine_fit_quality(imglist,filteredTable, print_fit_parameters=True): """Determine the quality of the fit to the data Parameters ---------- imglist : list output of interpret_fits. Contains sourcelist tables, newly computed WCS info, etc. for every chip of every valid input image...
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
generate_astrometric_catalog
def generate_astrometric_catalog(imglist, **pars): """Generates a catalog of all sources from an existing astrometric catalog are in or near the FOVs of the images in the input list. Parameters ---------- imglist : list List of one or more calibrated fits images that will be used for ca...
python
def generate_astrometric_catalog(imglist, **pars): """Generates a catalog of all sources from an existing astrometric catalog are in or near the FOVs of the images in the input list. Parameters ---------- imglist : list List of one or more calibrated fits images that will be used for ca...
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
generate_source_catalogs
def generate_source_catalogs(imglist, **pars): """Generates a dictionary of source catalogs keyed by image name. Parameters ---------- imglist : list List of one or more calibrated fits images that will be used for source detection. Returns ------- sourcecatalogdict : dictionary ...
python
def generate_source_catalogs(imglist, **pars): """Generates a dictionary of source catalogs keyed by image name. Parameters ---------- imglist : list List of one or more calibrated fits images that will be used for source detection. Returns ------- sourcecatalogdict : dictionary ...
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
update_image_wcs_info
def update_image_wcs_info(tweakwcs_output): """Write newly computed WCS information to image headers and write headerlet files Parameters ---------- tweakwcs_output : list output of tweakwcs. Contains sourcelist tables, newly computed WCS info, etc. for every chip of every valid...
python
def update_image_wcs_info(tweakwcs_output): """Write newly computed WCS information to image headers and write headerlet files Parameters ---------- tweakwcs_output : list output of tweakwcs. Contains sourcelist tables, newly computed WCS info, etc. for every chip of every valid...
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Write newly computed WCS information to image headers and write headerlet files Parameters ---------- tweakwcs_output : list output of tweakwcs. Contains sourcelist tables, newly computed WCS info, etc. for every chip of every valid input image. Returns ...
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
update_headerlet_phdu
def update_headerlet_phdu(tweakwcs_item, headerlet): """Update the primary header data unit keywords of a headerlet object in-place Parameters ========== tweakwc_item : Basically the output from tweakwcs which contains the cross match and fit information for every chip of every valid in...
python
def update_headerlet_phdu(tweakwcs_item, headerlet): """Update the primary header data unit keywords of a headerlet object in-place Parameters ========== tweakwc_item : Basically the output from tweakwcs which contains the cross match and fit information for every chip of every valid in...
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spacetelescope/drizzlepac
drizzlepac/alignimages.py
interpret_fit_rms
def interpret_fit_rms(tweakwcs_output, reference_catalog): """Interpret the FIT information to convert RMS to physical units Parameters ---------- tweakwcs_output : list output of tweakwcs. Contains sourcelist tables, newly computed WCS info, etc. for every chip of every valid input ima...
python
def interpret_fit_rms(tweakwcs_output, reference_catalog): """Interpret the FIT information to convert RMS to physical units Parameters ---------- tweakwcs_output : list output of tweakwcs. Contains sourcelist tables, newly computed WCS info, etc. for every chip of every valid input ima...
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Interpret the FIT information to convert RMS to physical units Parameters ---------- tweakwcs_output : list output of tweakwcs. Contains sourcelist tables, newly computed WCS info, etc. for every chip of every valid input image. This list gets updated, in-place, with the new RMS values; ...
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train
https://github.com/spacetelescope/drizzlepac/blob/15bec3c929a6a869d9e71b9398ced43ede0620f1/drizzlepac/alignimages.py#L1089-L1170
spacetelescope/drizzlepac
drizzlepac/sky.py
sky
def sky(input=None,outExt=None,configObj=None, group=None, editpars=False, **inputDict): """ Perform sky subtraction on input list of images Parameters ---------- input : str or list of str a python list of image filenames, or just a single filename configObj : configObject an i...
python
def sky(input=None,outExt=None,configObj=None, group=None, editpars=False, **inputDict): """ Perform sky subtraction on input list of images Parameters ---------- input : str or list of str a python list of image filenames, or just a single filename configObj : configObject an i...
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train
https://github.com/spacetelescope/drizzlepac/blob/15bec3c929a6a869d9e71b9398ced43ede0620f1/drizzlepac/sky.py#L43-L107
spacetelescope/drizzlepac
drizzlepac/sky.py
_skyUserFromFile
def _skyUserFromFile(imageObjList, skyFile, apply_sky=None): """ Apply sky value as read in from a user-supplied input file. """ skyKW="MDRIZSKY" #header keyword that contains the sky that's been subtracted # create dict of fname=sky pairs skyvals = {} if apply_sky is None: skyappl...
python
def _skyUserFromFile(imageObjList, skyFile, apply_sky=None): """ Apply sky value as read in from a user-supplied input file. """ skyKW="MDRIZSKY" #header keyword that contains the sky that's been subtracted # create dict of fname=sky pairs skyvals = {} if apply_sky is None: skyappl...
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Apply sky value as read in from a user-supplied input file.
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train
https://github.com/spacetelescope/drizzlepac/blob/15bec3c929a6a869d9e71b9398ced43ede0620f1/drizzlepac/sky.py#L453-L518
spacetelescope/drizzlepac
drizzlepac/sky.py
_skyUserFromHeaderKwd
def _skyUserFromHeaderKwd(imageSet,paramDict): """ subtract the sky from all the chips in the imagefile that imageSet represents imageSet is a single imageObject reference paramDict should be the subset from an actual config object """ _skyValue=0.0 #this will be the sky value computed for ...
python
def _skyUserFromHeaderKwd(imageSet,paramDict): """ subtract the sky from all the chips in the imagefile that imageSet represents imageSet is a single imageObject reference paramDict should be the subset from an actual config object """ _skyValue=0.0 #this will be the sky value computed for ...
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train
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spacetelescope/drizzlepac
drizzlepac/sky.py
_skySub
def _skySub(imageSet,paramDict,saveFile=False): """ subtract the sky from all the chips in the imagefile that imageSet represents imageSet is a single imageObject reference paramDict should be the subset from an actual config object if saveFile=True, then images that have been sky subtracted are sa...
python
def _skySub(imageSet,paramDict,saveFile=False): """ subtract the sky from all the chips in the imagefile that imageSet represents imageSet is a single imageObject reference paramDict should be the subset from an actual config object if saveFile=True, then images that have been sky subtracted are sa...
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train
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spacetelescope/drizzlepac
drizzlepac/sky.py
_computeSky
def _computeSky(image, skypars, memmap=False): """ Compute the sky value for the data array passed to the function image is a fits object which contains the data and the header for one image extension skypars is passed in as paramDict """ #this object contains the returned values from the...
python
def _computeSky(image, skypars, memmap=False): """ Compute the sky value for the data array passed to the function image is a fits object which contains the data and the header for one image extension skypars is passed in as paramDict """ #this object contains the returned values from the...
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train
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spacetelescope/drizzlepac
drizzlepac/sky.py
_subtractSky
def _subtractSky(image,skyValue,memmap=False): """ subtract the given sky value from each the data array that has been passed. image is a fits object that contains the data and header for one image extension """ try: np.subtract(image.data,skyValue,image.data) except IOError: ...
python
def _subtractSky(image,skyValue,memmap=False): """ subtract the given sky value from each the data array that has been passed. image is a fits object that contains the data and header for one image extension """ try: np.subtract(image.data,skyValue,image.data) except IOError: ...
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subtract the given sky value from each the data array that has been passed. image is a fits object that contains the data and header for one image extension
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train
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spacetelescope/drizzlepac
drizzlepac/sky.py
_updateKW
def _updateKW(image, filename, exten, skyKW, Value): """update the header with the kw,value""" # Update the value in memory image.header[skyKW] = Value # Now update the value on disk if isinstance(exten,tuple): strexten = '[%s,%s]'%(exten[0],str(exten[1])) else: strexten = '[%s]...
python
def _updateKW(image, filename, exten, skyKW, Value): """update the header with the kw,value""" # Update the value in memory image.header[skyKW] = Value # Now update the value on disk if isinstance(exten,tuple): strexten = '[%s,%s]'%(exten[0],str(exten[1])) else: strexten = '[%s]...
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train
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spacetelescope/drizzlepac
drizzlepac/sky.py
_addDefaultSkyKW
def _addDefaultSkyKW(imageObjList): """Add MDRIZSKY keyword to "commanded" SCI headers of all input images, if that keyword does not already exist. """ skyKW = "MDRIZSKY" Value = 0.0 for imageSet in imageObjList: fname = imageSet._filename numchips=imageSet._numchips ...
python
def _addDefaultSkyKW(imageObjList): """Add MDRIZSKY keyword to "commanded" SCI headers of all input images, if that keyword does not already exist. """ skyKW = "MDRIZSKY" Value = 0.0 for imageSet in imageObjList: fname = imageSet._filename numchips=imageSet._numchips ...
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Add MDRIZSKY keyword to "commanded" SCI headers of all input images, if that keyword does not already exist.
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train
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spacetelescope/drizzlepac
drizzlepac/sky.py
help
def help(file=None): """ Print out syntax help for running astrodrizzle Parameters ---------- file : str (Default = None) If given, write out help to the filename specified by this parameter Any previously existing file with this name will be deleted before writing out the h...
python
def help(file=None): """ Print out syntax help for running astrodrizzle Parameters ---------- file : str (Default = None) If given, write out help to the filename specified by this parameter Any previously existing file with this name will be deleted before writing out the h...
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Print out syntax help for running astrodrizzle Parameters ---------- file : str (Default = None) If given, write out help to the filename specified by this parameter Any previously existing file with this name will be deleted before writing out the help.
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train
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spacetelescope/drizzlepac
drizzlepac/skytopix.py
rd2xy
def rd2xy(input,ra=None,dec=None,coordfile=None,colnames=None, precision=6,output=None,verbose=True): """ Primary interface to perform coordinate transformations from pixel to sky coordinates using STWCS and full distortion models read from the input image header. """ single_coor...
python
def rd2xy(input,ra=None,dec=None,coordfile=None,colnames=None, precision=6,output=None,verbose=True): """ Primary interface to perform coordinate transformations from pixel to sky coordinates using STWCS and full distortion models read from the input image header. """ single_coor...
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Primary interface to perform coordinate transformations from pixel to sky coordinates using STWCS and full distortion models read from the input image header.
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train
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
create_astrometric_catalog
def create_astrometric_catalog(inputs, **pars): """Create an astrometric catalog that covers the inputs' field-of-view. Parameters ---------- input : str, list Filenames of images to be aligned to astrometric catalog catalog : str, optional Name of catalog to extract astrometric po...
python
def create_astrometric_catalog(inputs, **pars): """Create an astrometric catalog that covers the inputs' field-of-view. Parameters ---------- input : str, list Filenames of images to be aligned to astrometric catalog catalog : str, optional Name of catalog to extract astrometric po...
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train
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
build_reference_wcs
def build_reference_wcs(inputs, sciname='sci'): """Create the reference WCS based on all the inputs for a field""" # start by creating a composite field-of-view for all inputs wcslist = [] for img in inputs: nsci = countExtn(img) for num in range(nsci): extname = (sciname, nu...
python
def build_reference_wcs(inputs, sciname='sci'): """Create the reference WCS based on all the inputs for a field""" # start by creating a composite field-of-view for all inputs wcslist = [] for img in inputs: nsci = countExtn(img) for num in range(nsci): extname = (sciname, nu...
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train
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
get_catalog
def get_catalog(ra, dec, sr=0.1, fmt='CSV', catalog='GSC241'): """ Extract catalog from VO web service. Parameters ---------- ra : float Right Ascension (RA) of center of field-of-view (in decimal degrees) dec : float Declination (Dec) of center of field-of-view (in decimal degrees...
python
def get_catalog(ra, dec, sr=0.1, fmt='CSV', catalog='GSC241'): """ Extract catalog from VO web service. Parameters ---------- ra : float Right Ascension (RA) of center of field-of-view (in decimal degrees) dec : float Declination (Dec) of center of field-of-view (in decimal degrees...
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Extract catalog from VO web service. Parameters ---------- ra : float Right Ascension (RA) of center of field-of-view (in decimal degrees) dec : float Declination (Dec) of center of field-of-view (in decimal degrees) sr : float, optional Search radius (in decimal degrees) ...
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train
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
compute_radius
def compute_radius(wcs): """Compute the radius from the center to the furthest edge of the WCS.""" ra, dec = wcs.wcs.crval img_center = SkyCoord(ra=ra * u.degree, dec=dec * u.degree) wcs_foot = wcs.calc_footprint() img_corners = SkyCoord(ra=wcs_foot[:, 0] * u.degree, dec=...
python
def compute_radius(wcs): """Compute the radius from the center to the furthest edge of the WCS.""" ra, dec = wcs.wcs.crval img_center = SkyCoord(ra=ra * u.degree, dec=dec * u.degree) wcs_foot = wcs.calc_footprint() img_corners = SkyCoord(ra=wcs_foot[:, 0] * u.degree, dec=...
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train
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
find_gsc_offset
def find_gsc_offset(image, input_catalog='GSC1', output_catalog='GAIA'): """Find the GSC to GAIA offset based on guide star coordinates Parameters ---------- image : str Filename of image to be processed. Returns ------- delta_ra, delta_dec : tuple of floats Offset in decim...
python
def find_gsc_offset(image, input_catalog='GSC1', output_catalog='GAIA'): """Find the GSC to GAIA offset based on guide star coordinates Parameters ---------- image : str Filename of image to be processed. Returns ------- delta_ra, delta_dec : tuple of floats Offset in decim...
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Find the GSC to GAIA offset based on guide star coordinates Parameters ---------- image : str Filename of image to be processed. Returns ------- delta_ra, delta_dec : tuple of floats Offset in decimal degrees of image based on correction to guide star coordinates relati...
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train
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
extract_sources
def extract_sources(img, **pars): """Use photutils to find sources in image based on segmentation. Parameters ---------- dqmask : ndarray Bitmask which identifies whether a pixel should be used (1) in source identification or not(0). If provided, this mask will be applied to the ...
python
def extract_sources(img, **pars): """Use photutils to find sources in image based on segmentation. Parameters ---------- dqmask : ndarray Bitmask which identifies whether a pixel should be used (1) in source identification or not(0). If provided, this mask will be applied to the ...
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train
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
classify_sources
def classify_sources(catalog, sources=None): """ Convert moments_central attribute for source catalog into star/cr flag. This algorithm interprets the central_moments from the source_properties generated for the sources as more-likely a star or a cosmic-ray. It is not intended or expected to be precis...
python
def classify_sources(catalog, sources=None): """ Convert moments_central attribute for source catalog into star/cr flag. This algorithm interprets the central_moments from the source_properties generated for the sources as more-likely a star or a cosmic-ray. It is not intended or expected to be precis...
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Convert moments_central attribute for source catalog into star/cr flag. This algorithm interprets the central_moments from the source_properties generated for the sources as more-likely a star or a cosmic-ray. It is not intended or expected to be precise, merely a means of making a first cut at removi...
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
generate_source_catalog
def generate_source_catalog(image, **kwargs): """ Build source catalogs for each chip using photutils. The catalog returned by this function includes sources found in all chips of the input image with the positions translated to the coordinate frame defined by the reference WCS `refwcs`. The sources w...
python
def generate_source_catalog(image, **kwargs): """ Build source catalogs for each chip using photutils. The catalog returned by this function includes sources found in all chips of the input image with the positions translated to the coordinate frame defined by the reference WCS `refwcs`. The sources w...
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Build source catalogs for each chip using photutils. The catalog returned by this function includes sources found in all chips of the input image with the positions translated to the coordinate frame defined by the reference WCS `refwcs`. The sources will be - identified using photutils segmentation-b...
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train
https://github.com/spacetelescope/drizzlepac/blob/15bec3c929a6a869d9e71b9398ced43ede0620f1/drizzlepac/hlautils/astrometric_utils.py#L554-L645
spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
generate_sky_catalog
def generate_sky_catalog(image, refwcs, **kwargs): """Build source catalog from input image using photutils. This script borrows heavily from build_source_catalog. The catalog returned by this function includes sources found in all chips of the input image with the positions translated to the coordina...
python
def generate_sky_catalog(image, refwcs, **kwargs): """Build source catalog from input image using photutils. This script borrows heavily from build_source_catalog. The catalog returned by this function includes sources found in all chips of the input image with the positions translated to the coordina...
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https://github.com/spacetelescope/drizzlepac/blob/15bec3c929a6a869d9e71b9398ced43ede0620f1/drizzlepac/hlautils/astrometric_utils.py#L648-L723
spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
compute_photometry
def compute_photometry(catalog, photmode): """ Compute magnitudes for sources from catalog based on observations photmode. Parameters ---------- catalog : `~astropy.table.Table` Astropy Table with 'source_sum' column for the measured flux for each source. photmode : str Specificati...
python
def compute_photometry(catalog, photmode): """ Compute magnitudes for sources from catalog based on observations photmode. Parameters ---------- catalog : `~astropy.table.Table` Astropy Table with 'source_sum' column for the measured flux for each source. photmode : str Specificati...
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
filter_catalog
def filter_catalog(catalog, **kwargs): """ Create a new catalog selected from input based on photometry. Parameters ---------- bright_limit : float Fraction of catalog based on brightness that should be retained. Value of 1.00 means full catalog. max_bright : int Maximum nu...
python
def filter_catalog(catalog, **kwargs): """ Create a new catalog selected from input based on photometry. Parameters ---------- bright_limit : float Fraction of catalog based on brightness that should be retained. Value of 1.00 means full catalog. max_bright : int Maximum nu...
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train
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
build_self_reference
def build_self_reference(filename, clean_wcs=False): """ This function creates a reference, undistorted WCS that can be used to apply a correction to the WCS of the input file. Parameters ---------- filename : str Filename of image which will be corrected, and which will form the basis ...
python
def build_self_reference(filename, clean_wcs=False): """ This function creates a reference, undistorted WCS that can be used to apply a correction to the WCS of the input file. Parameters ---------- filename : str Filename of image which will be corrected, and which will form the basis ...
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
read_hlet_wcs
def read_hlet_wcs(filename, ext): """Insure `stwcs.wcsutil.HSTWCS` includes all attributes of a full image WCS. For headerlets, the WCS does not contain information about the size of the image, as the image array is not present in the headerlet. """ hstwcs = wcsutil.HSTWCS(filename, ext=ext) if...
python
def read_hlet_wcs(filename, ext): """Insure `stwcs.wcsutil.HSTWCS` includes all attributes of a full image WCS. For headerlets, the WCS does not contain information about the size of the image, as the image array is not present in the headerlet. """ hstwcs = wcsutil.HSTWCS(filename, ext=ext) if...
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spacetelescope/drizzlepac
drizzlepac/hlautils/astrometric_utils.py
build_hstwcs
def build_hstwcs(crval1, crval2, crpix1, crpix2, naxis1, naxis2, pscale, orientat): """ Create an `stwcs.wcsutil.HSTWCS` object for a default instrument without distortion based on user provided parameter values. """ wcsout = wcsutil.HSTWCS() wcsout.wcs.crval = np.array([crval1, crval2]) wcsout....
python
def build_hstwcs(crval1, crval2, crpix1, crpix2, naxis1, naxis2, pscale, orientat): """ Create an `stwcs.wcsutil.HSTWCS` object for a default instrument without distortion based on user provided parameter values. """ wcsout = wcsutil.HSTWCS() wcsout.wcs.crval = np.array([crval1, crval2]) wcsout....
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Create an `stwcs.wcsutil.HSTWCS` object for a default instrument without distortion based on user provided parameter values.
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