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rgmining/ria
ria/bipartite_sum.py
Reviewer.update_anomalous_score
def update_anomalous_score(self): """Update anomalous score. New anomalous score is the summation of weighted differences between current summary and reviews. The weights come from credibilities. Therefore, the new anomalous score is defined as .. math:: {\\rm ano...
python
def update_anomalous_score(self): """Update anomalous score. New anomalous score is the summation of weighted differences between current summary and reviews. The weights come from credibilities. Therefore, the new anomalous score is defined as .. math:: {\\rm ano...
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rgmining/ria
ria/bipartite_sum.py
BipartiteGraph.update
def update(self): """ Update reviewers' anomalous scores and products' summaries. The update consists of 2 steps; Step1 (updating summaries): Update summaries of products with anomalous scores of reviewers and weight function. The weight is calculated by the manner in ...
python
def update(self): """ Update reviewers' anomalous scores and products' summaries. The update consists of 2 steps; Step1 (updating summaries): Update summaries of products with anomalous scores of reviewers and weight function. The weight is calculated by the manner in ...
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kodexlab/reliure
reliure/utils/__init__.py
parse_bool
def parse_bool(value): """ Convert a string to a boolean >>> parse_bool(None) False >>> parse_bool("true") True >>> parse_bool("TRUE") True >>> parse_bool("yes") True >>> parse_bool("1") True >>> parse_bool("false") False >>> parse_bool("sqdf") False ...
python
def parse_bool(value): """ Convert a string to a boolean >>> parse_bool(None) False >>> parse_bool("true") True >>> parse_bool("TRUE") True >>> parse_bool("yes") True >>> parse_bool("1") True >>> parse_bool("false") False >>> parse_bool("sqdf") False ...
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Convert a string to a boolean >>> parse_bool(None) False >>> parse_bool("true") True >>> parse_bool("TRUE") True >>> parse_bool("yes") True >>> parse_bool("1") True >>> parse_bool("false") False >>> parse_bool("sqdf") False >>> parse_bool(False) False...
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kodexlab/reliure
reliure/utils/__init__.py
deprecated
def deprecated(new_fct_name, logger=None): """ Decorator to notify that a fct is deprecated """ if logger is None: logger = logging.getLogger("kodex") nfct_name = new_fct_name def aux_deprecated(func): """This is a decorator which can be used to mark functions as deprecated. ...
python
def deprecated(new_fct_name, logger=None): """ Decorator to notify that a fct is deprecated """ if logger is None: logger = logging.getLogger("kodex") nfct_name = new_fct_name def aux_deprecated(func): """This is a decorator which can be used to mark functions as deprecated. ...
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kodexlab/reliure
reliure/utils/__init__.py
engine_schema
def engine_schema(engine, out_names=None, filename=None, format="pdf"): """ Build a graphviz schema of a reliure :class:`.Engine`. It depends on `graphviz <https://pypi.python.org/pypi/graphviz>`_. :param engine: reliure engine to graph :type engine: :class:`.Engine` :param out_names: list of ...
python
def engine_schema(engine, out_names=None, filename=None, format="pdf"): """ Build a graphviz schema of a reliure :class:`.Engine`. It depends on `graphviz <https://pypi.python.org/pypi/graphviz>`_. :param engine: reliure engine to graph :type engine: :class:`.Engine` :param out_names: list of ...
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gfranxman/utinypass
utinypass/crypto.py
blockgen
def blockgen(bytes, block_size=16): ''' a block generator for pprp ''' for i in range(0, len(bytes), block_size): block = bytes[i:i + block_size] block_len = len(block) if block_len > 0: yield block if block_len < block_size: break
python
def blockgen(bytes, block_size=16): ''' a block generator for pprp ''' for i in range(0, len(bytes), block_size): block = bytes[i:i + block_size] block_len = len(block) if block_len > 0: yield block if block_len < block_size: break
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lehins/python-wepay
wepay/calls/user.py
User.__register
def __register(self, client_id, client_secret, email, scope, first_name, last_name, original_ip, original_device, **kwargs): """Call documentation: `/user/register <https://www.wepay.com/developer/reference/user#register>`_, plus extra keyword parameter: :keyw...
python
def __register(self, client_id, client_secret, email, scope, first_name, last_name, original_ip, original_device, **kwargs): """Call documentation: `/user/register <https://www.wepay.com/developer/reference/user#register>`_, plus extra keyword parameter: :keyw...
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lehins/python-wepay
wepay/calls/user.py
MFA.__create
def __create(self, type, **kwargs): """Call documentation: `/user/mfa/create <https://www.wepay.com/developer/reference/user-mfa#create>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay` :keyw...
python
def __create(self, type, **kwargs): """Call documentation: `/user/mfa/create <https://www.wepay.com/developer/reference/user-mfa#create>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay` :keyw...
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Call documentation: `/user/mfa/create <https://www.wepay.com/developer/reference/user-mfa#create>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay` :keyword str batch_reference_id: `reference_id` para...
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lehins/python-wepay
wepay/calls/user.py
MFA.__validate_cookie
def __validate_cookie(self, mfa_id, cookie, **kwargs): """Call documentation: `/user/mfa/validate_cookie <https://www.wepay.com/developer/reference/user-mfa#validate_cookie>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :c...
python
def __validate_cookie(self, mfa_id, cookie, **kwargs): """Call documentation: `/user/mfa/validate_cookie <https://www.wepay.com/developer/reference/user-mfa#validate_cookie>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :c...
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Call documentation: `/user/mfa/validate_cookie <https://www.wepay.com/developer/reference/user-mfa#validate_cookie>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay` :keyword str batch_reference_id: `...
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lehins/python-wepay
wepay/calls/user.py
MFA.__send_challenge
def __send_challenge(self, mfa_id, **kwargs): """Call documentation: `/user/mfa/send_challenge <https://www.wepay.com/developer/reference/user-mfa#send_challenge>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay...
python
def __send_challenge(self, mfa_id, **kwargs): """Call documentation: `/user/mfa/send_challenge <https://www.wepay.com/developer/reference/user-mfa#send_challenge>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay...
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lehins/python-wepay
wepay/calls/user.py
MFA.__send_default_challenge
def __send_default_challenge(self, **kwargs): """Call documentation: `/user/mfa/send_default_challenge <https://www.wepay.com/developer/reference/user-mfa#send_default_challenge>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see ...
python
def __send_default_challenge(self, **kwargs): """Call documentation: `/user/mfa/send_default_challenge <https://www.wepay.com/developer/reference/user-mfa#send_default_challenge>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see ...
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Call documentation: `/user/mfa/send_default_challenge <https://www.wepay.com/developer/reference/user-mfa#send_default_challenge>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay` :keyword str batch_r...
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lehins/python-wepay
wepay/calls/user.py
MFA.__confirm
def __confirm(self, mfa_id, challenge, **kwargs): """Call documentation: `/user/mfa/confirm <https://www.wepay.com/developer/reference/user-mfa#confirm>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay...
python
def __confirm(self, mfa_id, challenge, **kwargs): """Call documentation: `/user/mfa/confirm <https://www.wepay.com/developer/reference/user-mfa#confirm>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay...
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lehins/python-wepay
wepay/calls/user.py
MFA.__modify
def __modify(self, mfa_id, **kwargs): """Call documentation: `/user/mfa/modify <https://www.wepay.com/developer/reference/user-mfa#modify>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay` :ke...
python
def __modify(self, mfa_id, **kwargs): """Call documentation: `/user/mfa/modify <https://www.wepay.com/developer/reference/user-mfa#modify>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay` :ke...
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Call documentation: `/user/mfa/modify <https://www.wepay.com/developer/reference/user-mfa#modify>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see :class:`wepay.api.WePay` :keyword str batch_reference_id: `reference_id` para...
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kodexlab/reliure
reliure/utils/log.py
get_basic_logger
def get_basic_logger(level=logging.WARN, scope='reliure'): """ return a basic logger that print on stdout msg from reliure lib """ logger = logging.getLogger(scope) logger.setLevel(level) # create console handler with a higher log level ch = logging.StreamHandler() ch.setLevel(level) # c...
python
def get_basic_logger(level=logging.WARN, scope='reliure'): """ return a basic logger that print on stdout msg from reliure lib """ logger = logging.getLogger(scope) logger.setLevel(level) # create console handler with a higher log level ch = logging.StreamHandler() ch.setLevel(level) # c...
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kodexlab/reliure
reliure/utils/log.py
get_app_logger_color
def get_app_logger_color(appname, app_log_level=logging.INFO, log_level=logging.WARN, logfile=None): """ Configure the logging for an app using reliure (it log's both the app and reliure lib) :param appname: the name of the application to log :parap app_log_level: log level for the app :param log_level...
python
def get_app_logger_color(appname, app_log_level=logging.INFO, log_level=logging.WARN, logfile=None): """ Configure the logging for an app using reliure (it log's both the app and reliure lib) :param appname: the name of the application to log :parap app_log_level: log level for the app :param log_level...
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af/turrentine
turrentine/admin.py
ChangeableContentForm.save
def save(self, *args, **kwargs): """ Save the created_by and last_modified_by fields based on the current admin user. """ if not self.instance.id: self.instance.created_by = self.user self.instance.last_modified_by = self.user return super(ChangeableContentFor...
python
def save(self, *args, **kwargs): """ Save the created_by and last_modified_by fields based on the current admin user. """ if not self.instance.id: self.instance.created_by = self.user self.instance.last_modified_by = self.user return super(ChangeableContentFor...
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Save the created_by and last_modified_by fields based on the current admin user.
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af/turrentine
turrentine/admin.py
PageAdmin.get_urls
def get_urls(self): """ Add our preview view to our urls. """ urls = super(PageAdmin, self).get_urls() my_urls = patterns('', (r'^add/preview$', self.admin_site.admin_view(PagePreviewView.as_view())), (r'^(?P<id>\d+)/preview$', self.admin_site.admin_view(P...
python
def get_urls(self): """ Add our preview view to our urls. """ urls = super(PageAdmin, self).get_urls() my_urls = patterns('', (r'^add/preview$', self.admin_site.admin_view(PagePreviewView.as_view())), (r'^(?P<id>\d+)/preview$', self.admin_site.admin_view(P...
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Add our preview view to our urls.
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train
https://github.com/af/turrentine/blob/bbbd5139744ccc6264595cc8960784e5c308c009/turrentine/admin.py#L101-L111
af/turrentine
turrentine/admin.py
PagePreviewView.get_template_names
def get_template_names(self): """ Return the page's specified template name, or a fallback if one hasn't been chosen. """ posted_name = self.request.POST.get('template_name') if posted_name: return [posted_name,] else: return super(PagePreviewView,...
python
def get_template_names(self): """ Return the page's specified template name, or a fallback if one hasn't been chosen. """ posted_name = self.request.POST.get('template_name') if posted_name: return [posted_name,] else: return super(PagePreviewView,...
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Return the page's specified template name, or a fallback if one hasn't been chosen.
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train
https://github.com/af/turrentine/blob/bbbd5139744ccc6264595cc8960784e5c308c009/turrentine/admin.py#L135-L143
af/turrentine
turrentine/admin.py
PagePreviewView.post
def post(self, request, *args, **kwargs): """ Accepts POST requests, and substitute the data in for the page's attributes. """ self.object = self.get_object() self.object.content = request.POST['content'] self.object.title = request.POST['title'] self.object = se...
python
def post(self, request, *args, **kwargs): """ Accepts POST requests, and substitute the data in for the page's attributes. """ self.object = self.get_object() self.object.content = request.POST['content'] self.object.title = request.POST['title'] self.object = se...
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Accepts POST requests, and substitute the data in for the page's attributes.
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train
https://github.com/af/turrentine/blob/bbbd5139744ccc6264595cc8960784e5c308c009/turrentine/admin.py#L145-L155
hitchtest/hitchserve
hitchserve/service_bundle.py
ServiceBundle.redirect_stdout
def redirect_stdout(self): """Redirect stdout to file so that it can be tailed and aggregated with the other logs.""" self.hijacked_stdout = sys.stdout self.hijacked_stderr = sys.stderr # 0 must be set as the buffer, otherwise lines won't get logged in time. sys.stdout = open(sel...
python
def redirect_stdout(self): """Redirect stdout to file so that it can be tailed and aggregated with the other logs.""" self.hijacked_stdout = sys.stdout self.hijacked_stderr = sys.stderr # 0 must be set as the buffer, otherwise lines won't get logged in time. sys.stdout = open(sel...
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Redirect stdout to file so that it can be tailed and aggregated with the other logs.
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train
https://github.com/hitchtest/hitchserve/blob/a2def19979264186d283e76f7f0c88f3ed97f2e0/hitchserve/service_bundle.py#L202-L208
hitchtest/hitchserve
hitchserve/service_bundle.py
ServiceBundle.unredirect_stdout
def unredirect_stdout(self): """Redirect stdout and stderr back to screen.""" if hasattr(self, 'hijacked_stdout') and hasattr(self, 'hijacked_stderr'): sys.stdout = self.hijacked_stdout sys.stderr = self.hijacked_stderr
python
def unredirect_stdout(self): """Redirect stdout and stderr back to screen.""" if hasattr(self, 'hijacked_stdout') and hasattr(self, 'hijacked_stderr'): sys.stdout = self.hijacked_stdout sys.stderr = self.hijacked_stderr
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Redirect stdout and stderr back to screen.
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train
https://github.com/hitchtest/hitchserve/blob/a2def19979264186d283e76f7f0c88f3ed97f2e0/hitchserve/service_bundle.py#L210-L214
hitchtest/hitchserve
hitchserve/service_bundle.py
ServiceBundle.time_travel
def time_travel(self, datetime=None, timedelta=None, seconds=0, minutes=0, hours=0, days=0): """Mock moving forward or backward in time by shifting the system clock fed to the services tested. Note that all of these arguments can be used together, individually or not at all. The time traveled t...
python
def time_travel(self, datetime=None, timedelta=None, seconds=0, minutes=0, hours=0, days=0): """Mock moving forward or backward in time by shifting the system clock fed to the services tested. Note that all of these arguments can be used together, individually or not at all. The time traveled t...
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Mock moving forward or backward in time by shifting the system clock fed to the services tested. Note that all of these arguments can be used together, individually or not at all. The time traveled to will be the sum of all specified time deltas from datetime. If no datetime is specified, the d...
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train
https://github.com/hitchtest/hitchserve/blob/a2def19979264186d283e76f7f0c88f3ed97f2e0/hitchserve/service_bundle.py#L261-L285
hitchtest/hitchserve
hitchserve/service_bundle.py
ServiceBundle.wait_for_ipykernel
def wait_for_ipykernel(self, service_name, timeout=10): """Wait for an IPython kernel-nnnn.json filename message to appear in log.""" kernel_line = self._services[service_name].logs.tail.until( lambda line: "--existing" in line[1], timeout=10, lines_back=5 ) return kernel_lin...
python
def wait_for_ipykernel(self, service_name, timeout=10): """Wait for an IPython kernel-nnnn.json filename message to appear in log.""" kernel_line = self._services[service_name].logs.tail.until( lambda line: "--existing" in line[1], timeout=10, lines_back=5 ) return kernel_lin...
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Wait for an IPython kernel-nnnn.json filename message to appear in log.
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train
https://github.com/hitchtest/hitchserve/blob/a2def19979264186d283e76f7f0c88f3ed97f2e0/hitchserve/service_bundle.py#L294-L299
hitchtest/hitchserve
hitchserve/service_bundle.py
ServiceBundle.connect_to_ipykernel
def connect_to_ipykernel(self, service_name, timeout=10): """Connect to an IPython kernel as soon as its message is logged.""" kernel_json_file = self.wait_for_ipykernel(service_name, timeout=10) self.start_interactive_mode() subprocess.check_call([ sys.executable, "-m", "IPy...
python
def connect_to_ipykernel(self, service_name, timeout=10): """Connect to an IPython kernel as soon as its message is logged.""" kernel_json_file = self.wait_for_ipykernel(service_name, timeout=10) self.start_interactive_mode() subprocess.check_call([ sys.executable, "-m", "IPy...
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Connect to an IPython kernel as soon as its message is logged.
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train
https://github.com/hitchtest/hitchserve/blob/a2def19979264186d283e76f7f0c88f3ed97f2e0/hitchserve/service_bundle.py#L301-L308
EventTeam/beliefs
src/beliefs/referent.py
TaxonomyCell.build_class_graph
def build_class_graph(modules, klass=None, graph=None): """ Builds up a graph of the DictCell subclass structure """ if klass is None: class_graph = nx.DiGraph() for name, classmember in inspect.getmembers(modules, inspect.isclass): if issubclass(classmember, Refe...
python
def build_class_graph(modules, klass=None, graph=None): """ Builds up a graph of the DictCell subclass structure """ if klass is None: class_graph = nx.DiGraph() for name, classmember in inspect.getmembers(modules, inspect.isclass): if issubclass(classmember, Refe...
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Builds up a graph of the DictCell subclass structure
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train
https://github.com/EventTeam/beliefs/blob/c07d22b61bebeede74a72800030dde770bf64208/src/beliefs/referent.py#L45-L62
EventTeam/beliefs
src/beliefs/referent.py
Referent.cells_from_defaults
def cells_from_defaults(clz, jsonobj): """ Creates a referent instance of type `json.kind` and initializes it to default values. """ # convert strings to dicts if isinstance(jsonobj, (str, unicode)): jsonobj = json.loads(jsonobj) assert 'cells' in js...
python
def cells_from_defaults(clz, jsonobj): """ Creates a referent instance of type `json.kind` and initializes it to default values. """ # convert strings to dicts if isinstance(jsonobj, (str, unicode)): jsonobj = json.loads(jsonobj) assert 'cells' in js...
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Creates a referent instance of type `json.kind` and initializes it to default values.
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train
https://github.com/EventTeam/beliefs/blob/c07d22b61bebeede74a72800030dde770bf64208/src/beliefs/referent.py#L75-L96
EventTeam/beliefs
src/beliefs/referent.py
Referent.from_defaults
def from_defaults(clz, defaults): """ Given a dictionary of defaults, ie {attribute: value}, this classmethod constructs a new instance of the class and merges the defaults""" if isinstance(defaults, (str, unicode)): defaults = json.loads(defaults) c = clz() ...
python
def from_defaults(clz, defaults): """ Given a dictionary of defaults, ie {attribute: value}, this classmethod constructs a new instance of the class and merges the defaults""" if isinstance(defaults, (str, unicode)): defaults = json.loads(defaults) c = clz() ...
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Given a dictionary of defaults, ie {attribute: value}, this classmethod constructs a new instance of the class and merges the defaults
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train
https://github.com/EventTeam/beliefs/blob/c07d22b61bebeede74a72800030dde770bf64208/src/beliefs/referent.py#L100-L120
Ffisegydd/whatis
whatis/_iterable.py
get_element_types
def get_element_types(obj, **kwargs): """Get element types as a set.""" max_iterable_length = kwargs.get('max_iterable_length', 10000) consume_generator = kwargs.get('consume_generator', False) if not isiterable(obj): return None if isgenerator(obj) and not consume_generator: retu...
python
def get_element_types(obj, **kwargs): """Get element types as a set.""" max_iterable_length = kwargs.get('max_iterable_length', 10000) consume_generator = kwargs.get('consume_generator', False) if not isiterable(obj): return None if isgenerator(obj) and not consume_generator: retu...
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Get element types as a set.
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train
https://github.com/Ffisegydd/whatis/blob/eef780ced61aae6d001aeeef7574e5e27e613583/whatis/_iterable.py#L37-L57
ouroboroscoding/reconsider
reconsider.py
parseArgs
def parseArgs(args): """Parse Arguments Used to parse the arguments passed to the script Args: args (list): A list of strings representing arguments to a script Returns: dict: Returns a dictionary with args as keys and the values sent with them or True for valueless arguments Raises: ValueError: If ar...
python
def parseArgs(args): """Parse Arguments Used to parse the arguments passed to the script Args: args (list): A list of strings representing arguments to a script Returns: dict: Returns a dictionary with args as keys and the values sent with them or True for valueless arguments Raises: ValueError: If ar...
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Parse Arguments Used to parse the arguments passed to the script Args: args (list): A list of strings representing arguments to a script Returns: dict: Returns a dictionary with args as keys and the values sent with them or True for valueless arguments Raises: ValueError: If args is not a list or tuple
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train
https://github.com/ouroboroscoding/reconsider/blob/155061d72e757665f9d3fee5a8a9d6f31f6872ed/reconsider.py#L11-L53
ouroboroscoding/reconsider
reconsider.py
printHelp
def printHelp(script): """Print Help Prints out the arguments needs to run the script Returns: None """ print 'Reconsider cli script copyright 2016 OuroborosCoding' print '' print script + ' --source=localhost:28015 --destination=somedomain.com:28015' print script + ' --destination=somedomain.com:28015 --d...
python
def printHelp(script): """Print Help Prints out the arguments needs to run the script Returns: None """ print 'Reconsider cli script copyright 2016 OuroborosCoding' print '' print script + ' --source=localhost:28015 --destination=somedomain.com:28015' print script + ' --destination=somedomain.com:28015 --d...
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Print Help Prints out the arguments needs to run the script Returns: None
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train
https://github.com/ouroboroscoding/reconsider/blob/155061d72e757665f9d3fee5a8a9d6f31f6872ed/reconsider.py#L56-L84
xtrementl/focus
focus/plugin/modules/stats.py
Stats._setup_dir
def _setup_dir(self, base_dir): """ Creates stats directory for storing stat files. `base_dir` Base directory. """ stats_dir = self._sdir(base_dir) if not os.path.isdir(stats_dir): try: os.mkdir(stats_dir) except O...
python
def _setup_dir(self, base_dir): """ Creates stats directory for storing stat files. `base_dir` Base directory. """ stats_dir = self._sdir(base_dir) if not os.path.isdir(stats_dir): try: os.mkdir(stats_dir) except O...
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Creates stats directory for storing stat files. `base_dir` Base directory.
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train
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xtrementl/focus
focus/plugin/modules/stats.py
Stats._log_task
def _log_task(self, task): """ Logs task record to file. `task` ``Task`` instance. """ if not task.duration: return self._setup_dir(task.base_dir) stats_dir = self._sdir(task.base_dir) duration = task.duration while d...
python
def _log_task(self, task): """ Logs task record to file. `task` ``Task`` instance. """ if not task.duration: return self._setup_dir(task.base_dir) stats_dir = self._sdir(task.base_dir) duration = task.duration while d...
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train
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xtrementl/focus
focus/plugin/modules/stats.py
Stats._fuzzy_time_parse
def _fuzzy_time_parse(self, value): """ Parses a fuzzy time value into a meaningful interpretation. `value` String value to parse. """ value = value.lower().strip() today = datetime.date.today() if value in ('today', 't'): return tod...
python
def _fuzzy_time_parse(self, value): """ Parses a fuzzy time value into a meaningful interpretation. `value` String value to parse. """ value = value.lower().strip() today = datetime.date.today() if value in ('today', 't'): return tod...
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Parses a fuzzy time value into a meaningful interpretation. `value` String value to parse.
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train
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xtrementl/focus
focus/plugin/modules/stats.py
Stats._get_stats
def _get_stats(self, task, start_date): """ Fetches statistic information for given task and start range. """ stats = [] stats_dir = self._sdir(task.base_dir) date = start_date end_date = datetime.date.today() delta = datetime.timedelta(days=1) while...
python
def _get_stats(self, task, start_date): """ Fetches statistic information for given task and start range. """ stats = [] stats_dir = self._sdir(task.base_dir) date = start_date end_date = datetime.date.today() delta = datetime.timedelta(days=1) while...
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Fetches statistic information for given task and start range.
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xtrementl/focus
focus/plugin/modules/stats.py
Stats._print_stats
def _print_stats(self, env, stats): """ Prints statistic information using io stream. `env` ``Environment`` object. `stats` Tuple of task stats for each date. """ def _format_time(mins): """ Generates formatted time string...
python
def _print_stats(self, env, stats): """ Prints statistic information using io stream. `env` ``Environment`` object. `stats` Tuple of task stats for each date. """ def _format_time(mins): """ Generates formatted time string...
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Prints statistic information using io stream. `env` ``Environment`` object. `stats` Tuple of task stats for each date.
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xtrementl/focus
focus/plugin/modules/stats.py
Stats.execute
def execute(self, env, args): """ Prints task information. `env` Runtime ``Environment`` instance. `args` Arguments object from arg parser. """ start = self._fuzzy_time_parse(args.start) if not start: raise errors....
python
def execute(self, env, args): """ Prints task information. `env` Runtime ``Environment`` instance. `args` Arguments object from arg parser. """ start = self._fuzzy_time_parse(args.start) if not start: raise errors....
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Prints task information. `env` Runtime ``Environment`` instance. `args` Arguments object from arg parser.
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train
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etcher-be/elib_run
elib_run/_find_exe.py
find_executable
def find_executable(executable: str, *paths: str) -> typing.Optional[Path]: """ Based on: https://gist.github.com/4368898 Public domain code by anatoly techtonik <techtonik@gmail.com> Programmatic equivalent to Linux `which` and Windows `where` Find if ´executable´ can be run. Looks for it in 'pa...
python
def find_executable(executable: str, *paths: str) -> typing.Optional[Path]: """ Based on: https://gist.github.com/4368898 Public domain code by anatoly techtonik <techtonik@gmail.com> Programmatic equivalent to Linux `which` and Windows `where` Find if ´executable´ can be run. Looks for it in 'pa...
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train
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rich-pixley/rain
rain/__init__.py
WorkSpace.create
def create(self): """called to create the work space""" self.logger.log(logging.DEBUG, 'os.mkdir %s', self.name) os.mkdir(self.name)
python
def create(self): """called to create the work space""" self.logger.log(logging.DEBUG, 'os.mkdir %s', self.name) os.mkdir(self.name)
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fordhurley/s3url
s3url/s3.py
parse_obj
def parse_obj(obj): """ >>> parse_obj('bucket/key') ('bucket', 'key') >>> parse_obj('my-bucket/path/to/file.txt') ('my-bucket', 'path/to/file.txt') >>> parse_obj('s3://this_bucket/some/path.txt') ('this_bucket', 'some/path.txt') >>> parse_obj('https://s3.amazonaws.com/bucket/file.txt') ...
python
def parse_obj(obj): """ >>> parse_obj('bucket/key') ('bucket', 'key') >>> parse_obj('my-bucket/path/to/file.txt') ('my-bucket', 'path/to/file.txt') >>> parse_obj('s3://this_bucket/some/path.txt') ('this_bucket', 'some/path.txt') >>> parse_obj('https://s3.amazonaws.com/bucket/file.txt') ...
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>>> parse_obj('bucket/key') ('bucket', 'key') >>> parse_obj('my-bucket/path/to/file.txt') ('my-bucket', 'path/to/file.txt') >>> parse_obj('s3://this_bucket/some/path.txt') ('this_bucket', 'some/path.txt') >>> parse_obj('https://s3.amazonaws.com/bucket/file.txt') ('bucket', 'file.txt') >>...
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pjuren/pyokit
src/pyokit/scripts/remDupsBED.py
ambigFilter
def ambigFilter(in_fh1, in_fh2, out_fh1, out_fh2, verbose=False, best=False): """ @summary: take reads from in_fh1 and output to out_fh1 if they don't appear also in in_fh2 (ditto for in_fh2) @param in_fh1: BED formated stream of reads @param in_fh2: BED formated stream of reads @param ...
python
def ambigFilter(in_fh1, in_fh2, out_fh1, out_fh2, verbose=False, best=False): """ @summary: take reads from in_fh1 and output to out_fh1 if they don't appear also in in_fh2 (ditto for in_fh2) @param in_fh1: BED formated stream of reads @param in_fh2: BED formated stream of reads @param ...
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@summary: take reads from in_fh1 and output to out_fh1 if they don't appear also in in_fh2 (ditto for in_fh2) @param in_fh1: BED formated stream of reads @param in_fh2: BED formated stream of reads @param out_fh1: Output reads that pass from in_fh1 to this stream @param out_fh2: Output re...
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train
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ryanjdillon/pyotelem
pyotelem/physio_seal.py
bodycomp
def bodycomp(mass, tbw, method='reilly', simulate=False, n_rand=1000): '''Create dataframe with derived body composition values Args ---- mass: ndarray Mass of the seal (kg) tbw: ndarray Total body water (kg) method: str name of method used to derive composition values ...
python
def bodycomp(mass, tbw, method='reilly', simulate=False, n_rand=1000): '''Create dataframe with derived body composition values Args ---- mass: ndarray Mass of the seal (kg) tbw: ndarray Total body water (kg) method: str name of method used to derive composition values ...
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train
https://github.com/ryanjdillon/pyotelem/blob/816563a9c3feb3fa416f1c2921c6b75db34111ad/pyotelem/physio_seal.py#L49-L124
ryanjdillon/pyotelem
pyotelem/physio_seal.py
perc_bc_from_lipid
def perc_bc_from_lipid(perc_lipid, perc_water=None): '''Calculate body composition component percentages based on % lipid Calculation of percent protein and percent ash are based on those presented in Reilly and Fedak (1990). Args ---- perc_lipid: float or ndarray 1D array of percent l...
python
def perc_bc_from_lipid(perc_lipid, perc_water=None): '''Calculate body composition component percentages based on % lipid Calculation of percent protein and percent ash are based on those presented in Reilly and Fedak (1990). Args ---- perc_lipid: float or ndarray 1D array of percent l...
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train
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ryanjdillon/pyotelem
pyotelem/physio_seal.py
lip2dens
def lip2dens(perc_lipid, dens_lipid=0.9007, dens_prot=1.34, dens_water=0.994, dens_ash=2.3): '''Derive tissue density from lipids The equation calculating animal density is from Biuw et al. (2003), and default values for component densities are from human studies collected in the book by Moore ...
python
def lip2dens(perc_lipid, dens_lipid=0.9007, dens_prot=1.34, dens_water=0.994, dens_ash=2.3): '''Derive tissue density from lipids The equation calculating animal density is from Biuw et al. (2003), and default values for component densities are from human studies collected in the book by Moore ...
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train
https://github.com/ryanjdillon/pyotelem/blob/816563a9c3feb3fa416f1c2921c6b75db34111ad/pyotelem/physio_seal.py#L203-L254
ryanjdillon/pyotelem
pyotelem/physio_seal.py
dens2lip
def dens2lip(dens_gcm3, dens_lipid=0.9007, dens_prot=1.34, dens_water=0.994, dens_ash=2.3): '''Get percent composition of animal from body density The equation calculating animal density is from Biuw et al. (2003), and default values for component densities are from human studies collected in t...
python
def dens2lip(dens_gcm3, dens_lipid=0.9007, dens_prot=1.34, dens_water=0.994, dens_ash=2.3): '''Get percent composition of animal from body density The equation calculating animal density is from Biuw et al. (2003), and default values for component densities are from human studies collected in t...
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train
https://github.com/ryanjdillon/pyotelem/blob/816563a9c3feb3fa416f1c2921c6b75db34111ad/pyotelem/physio_seal.py#L257-L315
ryanjdillon/pyotelem
pyotelem/physio_seal.py
diff_speed
def diff_speed(sw_dens=1.028, dens_gcm3=1.053, seal_length=300, seal_girth=200, Cd=0.09): '''Calculate terminal velocity of animal with a body size Args ---- sw_dens: float Density of seawater (g/cm^3) dens_gcm3: float Density of animal (g/cm^3) seal_length: float ...
python
def diff_speed(sw_dens=1.028, dens_gcm3=1.053, seal_length=300, seal_girth=200, Cd=0.09): '''Calculate terminal velocity of animal with a body size Args ---- sw_dens: float Density of seawater (g/cm^3) dens_gcm3: float Density of animal (g/cm^3) seal_length: float ...
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Calculate terminal velocity of animal with a body size Args ---- sw_dens: float Density of seawater (g/cm^3) dens_gcm3: float Density of animal (g/cm^3) seal_length: float Length of animal (cm) seal_girth: float Girth of animal (cm) Cd: float Drag coe...
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train
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ryanjdillon/pyotelem
pyotelem/physio_seal.py
surf_vol
def surf_vol(length, girth): '''Calculate the surface volume of an animal from its length and girth Args ---- length: float or ndarray Length of animal (m) girth: float or ndarray Girth of animal (m) Returns ------- surf: Surface area of animal (m^2) vol: fl...
python
def surf_vol(length, girth): '''Calculate the surface volume of an animal from its length and girth Args ---- length: float or ndarray Length of animal (m) girth: float or ndarray Girth of animal (m) Returns ------- surf: Surface area of animal (m^2) vol: fl...
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Calculate the surface volume of an animal from its length and girth Args ---- length: float or ndarray Length of animal (m) girth: float or ndarray Girth of animal (m) Returns ------- surf: Surface area of animal (m^2) vol: float or ndarray Volume of ani...
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train
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ryanjdillon/pyotelem
pyotelem/physio_seal.py
calc_seal_volume
def calc_seal_volume(mass_kg, dens_kgm3, length=None, girth=None): '''Calculate an animal's volume from mass and density or length and girth Args ---- mass_kg: float or ndarray Mass of animal (kg) dens_kgm3: float or ndarray Density of animal (kg/m^3) length: float or None ...
python
def calc_seal_volume(mass_kg, dens_kgm3, length=None, girth=None): '''Calculate an animal's volume from mass and density or length and girth Args ---- mass_kg: float or ndarray Mass of animal (kg) dens_kgm3: float or ndarray Density of animal (kg/m^3) length: float or None ...
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Calculate an animal's volume from mass and density or length and girth Args ---- mass_kg: float or ndarray Mass of animal (kg) dens_kgm3: float or ndarray Density of animal (kg/m^3) length: float or None Length of animal. Default `None` (m) girth: float or None G...
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pschmitt/zhue
zhue/model/bridge.py
Bridge.__find_new
def __find_new(self, hueobjecttype): ''' Starts a search for new Hue objects ''' assert hueobjecttype in ['lights', 'sensors'], \ 'Unsupported object type {}'.format(hueobjecttype) url = '{}/{}'.format(self.API, hueobjecttype) return self._request( ...
python
def __find_new(self, hueobjecttype): ''' Starts a search for new Hue objects ''' assert hueobjecttype in ['lights', 'sensors'], \ 'Unsupported object type {}'.format(hueobjecttype) url = '{}/{}'.format(self.API, hueobjecttype) return self._request( ...
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train
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pschmitt/zhue
zhue/model/bridge.py
Bridge.__get_new
def __get_new(self, hueobjecttype): ''' Get a list of newly found Hue object ''' assert hueobjecttype in ['lights', 'sensors'], \ 'Unsupported object type {}'.format(hueobjecttype) url = '{}/{}/new'.format(self.API, hueobjecttype) return self._request(url=url)
python
def __get_new(self, hueobjecttype): ''' Get a list of newly found Hue object ''' assert hueobjecttype in ['lights', 'sensors'], \ 'Unsupported object type {}'.format(hueobjecttype) url = '{}/{}/new'.format(self.API, hueobjecttype) return self._request(url=url)
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train
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bogdan-kulynych/defaultcontext
defaultcontext/stack.py
DefaultStack.get_context_manager
def get_context_manager(self, default): """A context manager for manipulating a default stack.""" try: self.stack.append(default) yield default finally: if self.enforce_nesting: if self.stack[-1] is not default: raise Assert...
python
def get_context_manager(self, default): """A context manager for manipulating a default stack.""" try: self.stack.append(default) yield default finally: if self.enforce_nesting: if self.stack[-1] is not default: raise Assert...
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A context manager for manipulating a default stack.
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dharif23/pyrainbowterm
pyrainbowterm/pyrainbowterm.py
print
def print(*args, **kwargs): """ Normally print function in python prints values to a stream / stdout >> print(value1, value2, sep='', end='\n', file=sys.stdout) Current package usage: ====================== print(value1, value2, sep='', end='\n', file=sys.stdout, color=None, bg_color=None, ...
python
def print(*args, **kwargs): """ Normally print function in python prints values to a stream / stdout >> print(value1, value2, sep='', end='\n', file=sys.stdout) Current package usage: ====================== print(value1, value2, sep='', end='\n', file=sys.stdout, color=None, bg_color=None, ...
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rackerlabs/rackspace-python-neutronclient
neutronclient/neutron/v2_0/vpn/ipsec_site_connection.py
IPsecSiteConnectionMixin.args2body
def args2body(self, parsed_args, body=None): """Add in conditional args and then return all conn info.""" if body is None: body = {} if parsed_args.dpd: vpn_utils.validate_dpd_dict(parsed_args.dpd) body['dpd'] = parsed_args.dpd if parsed_args.local_ep...
python
def args2body(self, parsed_args, body=None): """Add in conditional args and then return all conn info.""" if body is None: body = {} if parsed_args.dpd: vpn_utils.validate_dpd_dict(parsed_args.dpd) body['dpd'] = parsed_args.dpd if parsed_args.local_ep...
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train
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neoinsanity/cognate
cognate/component_core.py
copy_attribute_values
def copy_attribute_values(source, target, property_names): """Function to copy attributes from a source to a target object. This method copies the property values in a given list from a given source object to a target source object. :param source: The source object that is to be inspected for property values....
python
def copy_attribute_values(source, target, property_names): """Function to copy attributes from a source to a target object. This method copies the property values in a given list from a given source object to a target source object. :param source: The source object that is to be inspected for property values....
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neoinsanity/cognate
cognate/component_core.py
ComponentCore.cognate_options
def cognate_options(self, arg_parser): """This method will be called to get the *ComponentCore* configuration options. :param arg_parser: An *ArgumentParser* instance to add configuration options. :type arg_parser: argparse.ArgumentParser :return: None """ ...
python
def cognate_options(self, arg_parser): """This method will be called to get the *ComponentCore* configuration options. :param arg_parser: An *ArgumentParser* instance to add configuration options. :type arg_parser: argparse.ArgumentParser :return: None """ ...
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neoinsanity/cognate
cognate/component_core.py
ComponentCore._configure_logging
def _configure_logging(self): """This method configures the self.log entity for log handling. :return: None The method will cognate_configure the logging facilities for the derive service instance. This includes setting up logging to files and console. The configured log will b...
python
def _configure_logging(self): """This method configures the self.log entity for log handling. :return: None The method will cognate_configure the logging facilities for the derive service instance. This includes setting up logging to files and console. The configured log will b...
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This method configures the self.log entity for log handling. :return: None The method will cognate_configure the logging facilities for the derive service instance. This includes setting up logging to files and console. The configured log will be available to the service instan...
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train
https://github.com/neoinsanity/cognate/blob/ea7ac74d756872a34bd2fb6f8518fd5d7c6ba6f8/cognate/component_core.py#L221-L258
neoinsanity/cognate
cognate/component_core.py
ComponentCore._execute_configuration
def _execute_configuration(self, argv): """This method assigns an argument list to attributes assigned to self. :param argv: A list of arguments. :type argv: list<str> :return: None This is the work horse method that does the work of invoking *configuration_option* and ...
python
def _execute_configuration(self, argv): """This method assigns an argument list to attributes assigned to self. :param argv: A list of arguments. :type argv: list<str> :return: None This is the work horse method that does the work of invoking *configuration_option* and ...
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This method assigns an argument list to attributes assigned to self. :param argv: A list of arguments. :type argv: list<str> :return: None This is the work horse method that does the work of invoking *configuration_option* and *cognate_configure* methods on progenitor c...
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train
https://github.com/neoinsanity/cognate/blob/ea7ac74d756872a34bd2fb6f8518fd5d7c6ba6f8/cognate/component_core.py#L260-L315
neoinsanity/cognate
cognate/component_core.py
ComponentCore.invoke_method_on_children
def invoke_method_on_children(self, func_name=None, *args, **kwargs): """This helper method will walk the primary base class hierarchy to invoke a method if it exists for a given child base class. :param func_name: The name of a function to search for invocation. :type func_name: str ...
python
def invoke_method_on_children(self, func_name=None, *args, **kwargs): """This helper method will walk the primary base class hierarchy to invoke a method if it exists for a given child base class. :param func_name: The name of a function to search for invocation. :type func_name: str ...
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train
https://github.com/neoinsanity/cognate/blob/ea7ac74d756872a34bd2fb6f8518fd5d7c6ba6f8/cognate/component_core.py#L317-L405
thespacedoctor/neddy
neddy/namesearch.py
namesearch.get
def get(self): """ *get the namesearch object* **Return:** - ``results`` """ self.log.info('starting the ``get`` method') # SPLIT THE LIST OF NAMES INTO BATCHES self.theseBatches, self.theseBatchParams = self._split_incoming_queries_into_batches( ...
python
def get(self): """ *get the namesearch object* **Return:** - ``results`` """ self.log.info('starting the ``get`` method') # SPLIT THE LIST OF NAMES INTO BATCHES self.theseBatches, self.theseBatchParams = self._split_incoming_queries_into_batches( ...
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*get the namesearch object* **Return:** - ``results``
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train
https://github.com/thespacedoctor/neddy/blob/f32653b7d6a39a2c46c5845f83b3a29056311e5e/neddy/namesearch.py#L76-L97
thespacedoctor/neddy
neddy/namesearch.py
namesearch._build_api_url_and_download_results
def _build_api_url_and_download_results( self): """ *build api url for NED to perform batch name queries* **Key Arguments:** # - **Return:** - None .. todo:: - @review: when complete, clean _build_api_url_and_download_results me...
python
def _build_api_url_and_download_results( self): """ *build api url for NED to perform batch name queries* **Key Arguments:** # - **Return:** - None .. todo:: - @review: when complete, clean _build_api_url_and_download_results me...
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*build api url for NED to perform batch name queries* **Key Arguments:** # - **Return:** - None .. todo:: - @review: when complete, clean _build_api_url_and_download_results method - @review: when complete add logging
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train
https://github.com/thespacedoctor/neddy/blob/f32653b7d6a39a2c46c5845f83b3a29056311e5e/neddy/namesearch.py#L99-L180
thespacedoctor/neddy
neddy/namesearch.py
namesearch._output_results
def _output_results( self): """ *output results* **Key Arguments:** # - **Return:** - None .. todo:: - @review: when complete, clean _output_results method - @review: when complete add logging """ sel...
python
def _output_results( self): """ *output results* **Key Arguments:** # - **Return:** - None .. todo:: - @review: when complete, clean _output_results method - @review: when complete add logging """ sel...
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*output results* **Key Arguments:** # - **Return:** - None .. todo:: - @review: when complete, clean _output_results method - @review: when complete add logging
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train
https://github.com/thespacedoctor/neddy/blob/f32653b7d6a39a2c46c5845f83b3a29056311e5e/neddy/namesearch.py#L182-L244
abhinav/reversible
reversible/core.py
execute
def execute(action): """ Execute the given action. An action is any object with a ``forwards()`` and ``backwards()`` method. .. code-block:: python class CreateUser(object): def __init__(self, userinfo): self.userinfo = userinfo self.user_id = Non...
python
def execute(action): """ Execute the given action. An action is any object with a ``forwards()`` and ``backwards()`` method. .. code-block:: python class CreateUser(object): def __init__(self, userinfo): self.userinfo = userinfo self.user_id = Non...
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Execute the given action. An action is any object with a ``forwards()`` and ``backwards()`` method. .. code-block:: python class CreateUser(object): def __init__(self, userinfo): self.userinfo = userinfo self.user_id = None def forwards(self)...
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train
https://github.com/abhinav/reversible/blob/7e28aaf0390f7d4b889c6ac14d7b340f8f314e89/reversible/core.py#L9-L61
abhinav/reversible
reversible/core.py
action
def action(forwards=None, context_class=None): """ Decorator to build functions. This decorator can be applied to a function to build actions. The decorated function becomes the ``forwards`` implementation of the action. The first argument of the ``forwards`` implementation is a context object ...
python
def action(forwards=None, context_class=None): """ Decorator to build functions. This decorator can be applied to a function to build actions. The decorated function becomes the ``forwards`` implementation of the action. The first argument of the ``forwards`` implementation is a context object ...
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train
https://github.com/abhinav/reversible/blob/7e28aaf0390f7d4b889c6ac14d7b340f8f314e89/reversible/core.py#L125-L199
abhinav/reversible
reversible/core.py
ActionBuilder.backwards
def backwards(self, backwards): """Decorator to specify the ``backwards`` action.""" if self._backwards is not None: raise ValueError('Backwards action already specified.') self._backwards = backwards return backwards
python
def backwards(self, backwards): """Decorator to specify the ``backwards`` action.""" if self._backwards is not None: raise ValueError('Backwards action already specified.') self._backwards = backwards return backwards
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train
https://github.com/abhinav/reversible/blob/7e28aaf0390f7d4b889c6ac14d7b340f8f314e89/reversible/core.py#L110-L117
eddiejessup/spatious
spatious/geom.py
sphere_volume
def sphere_volume(R, n): """Return the volume of a sphere in an arbitrary number of dimensions. Parameters ---------- R: array-like Radius. n: array-like The number of dimensions of the space in which the sphere lives. Returns ------- V: array-like Volume. "...
python
def sphere_volume(R, n): """Return the volume of a sphere in an arbitrary number of dimensions. Parameters ---------- R: array-like Radius. n: array-like The number of dimensions of the space in which the sphere lives. Returns ------- V: array-like Volume. "...
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Return the volume of a sphere in an arbitrary number of dimensions. Parameters ---------- R: array-like Radius. n: array-like The number of dimensions of the space in which the sphere lives. Returns ------- V: array-like Volume.
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train
https://github.com/eddiejessup/spatious/blob/b7ae91bec029e85a45a7f303ee184076433723cd/spatious/geom.py#L12-L27
eddiejessup/spatious
spatious/geom.py
sphere_radius
def sphere_radius(V, n): """Return the radius of a sphere in an arbitrary number of dimensions. Parameters ---------- V: array-like Volume. n: array-like The number of dimensions of the space in which the sphere lives. Returns ------- R: array-like Radius. "...
python
def sphere_radius(V, n): """Return the radius of a sphere in an arbitrary number of dimensions. Parameters ---------- V: array-like Volume. n: array-like The number of dimensions of the space in which the sphere lives. Returns ------- R: array-like Radius. "...
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Return the radius of a sphere in an arbitrary number of dimensions. Parameters ---------- V: array-like Volume. n: array-like The number of dimensions of the space in which the sphere lives. Returns ------- R: array-like Radius.
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train
https://github.com/eddiejessup/spatious/blob/b7ae91bec029e85a45a7f303ee184076433723cd/spatious/geom.py#L30-L46
eddiejessup/spatious
spatious/geom.py
spherocylinder_radius
def spherocylinder_radius(V, l): """Return the radius of a [spherocylinder](http://en.wikipedia.org/wiki/Capsule_(geometry)). Parameters ---------- V: float Volume. l: float Length of the cylinder section. Returns ------- R: float Radius. """ return ...
python
def spherocylinder_radius(V, l): """Return the radius of a [spherocylinder](http://en.wikipedia.org/wiki/Capsule_(geometry)). Parameters ---------- V: float Volume. l: float Length of the cylinder section. Returns ------- R: float Radius. """ return ...
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Return the radius of a [spherocylinder](http://en.wikipedia.org/wiki/Capsule_(geometry)). Parameters ---------- V: float Volume. l: float Length of the cylinder section. Returns ------- R: float Radius.
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train
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eddiejessup/spatious
spatious/geom.py
spheres_sep
def spheres_sep(ar, aR, br, bR): """Return the separation distance between two spheres. Parameters ---------- ar, br: array-like, shape (n,) in n dimensions Coordinates of the centres of the spheres `a` and `b`. aR, bR: float Radiuses of the spheres `a` and `b`. Returns ---...
python
def spheres_sep(ar, aR, br, bR): """Return the separation distance between two spheres. Parameters ---------- ar, br: array-like, shape (n,) in n dimensions Coordinates of the centres of the spheres `a` and `b`. aR, bR: float Radiuses of the spheres `a` and `b`. Returns ---...
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Return the separation distance between two spheres. Parameters ---------- ar, br: array-like, shape (n,) in n dimensions Coordinates of the centres of the spheres `a` and `b`. aR, bR: float Radiuses of the spheres `a` and `b`. Returns ------- d: float Separation dis...
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train
https://github.com/eddiejessup/spatious/blob/b7ae91bec029e85a45a7f303ee184076433723cd/spatious/geom.py#L223-L239
eddiejessup/spatious
spatious/geom.py
spheres_intersect
def spheres_intersect(ar, aR, br, bR): """Return whether or not two spheres intersect each other. Parameters ---------- ar, br: array-like, shape (n,) in n dimensions Coordinates of the centres of the spheres `a` and `b`. aR, bR: float Radiuses of the spheres `a` and `b`. Retur...
python
def spheres_intersect(ar, aR, br, bR): """Return whether or not two spheres intersect each other. Parameters ---------- ar, br: array-like, shape (n,) in n dimensions Coordinates of the centres of the spheres `a` and `b`. aR, bR: float Radiuses of the spheres `a` and `b`. Retur...
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Return whether or not two spheres intersect each other. Parameters ---------- ar, br: array-like, shape (n,) in n dimensions Coordinates of the centres of the spheres `a` and `b`. aR, bR: float Radiuses of the spheres `a` and `b`. Returns ------- intersecting: boolean ...
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train
https://github.com/eddiejessup/spatious/blob/b7ae91bec029e85a45a7f303ee184076433723cd/spatious/geom.py#L242-L257
eddiejessup/spatious
spatious/geom.py
point_seg_sep
def point_seg_sep(ar, br1, br2): """Return the minimum separation vector between a point and a line segment, in 3 dimensions. Parameters ---------- ar: array-like, shape (3,) Coordinates of a point. br1, br2: array-like, shape (3,) Coordinates for the points of a line segment ...
python
def point_seg_sep(ar, br1, br2): """Return the minimum separation vector between a point and a line segment, in 3 dimensions. Parameters ---------- ar: array-like, shape (3,) Coordinates of a point. br1, br2: array-like, shape (3,) Coordinates for the points of a line segment ...
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Return the minimum separation vector between a point and a line segment, in 3 dimensions. Parameters ---------- ar: array-like, shape (3,) Coordinates of a point. br1, br2: array-like, shape (3,) Coordinates for the points of a line segment Returns ------- sep: float ar...
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xtrementl/focus
focus/common.py
readfile
def readfile(filename, binary=False): """ Reads the contents of the specified file. `filename` Filename to read. `binary` Set to ``True`` to indicate a binary file. Returns string or ``None``. """ if not os.path.isfile(filename): return None ...
python
def readfile(filename, binary=False): """ Reads the contents of the specified file. `filename` Filename to read. `binary` Set to ``True`` to indicate a binary file. Returns string or ``None``. """ if not os.path.isfile(filename): return None ...
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Reads the contents of the specified file. `filename` Filename to read. `binary` Set to ``True`` to indicate a binary file. Returns string or ``None``.
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train
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xtrementl/focus
focus/common.py
writefile
def writefile(filename, data, binary=False): """ Write the provided data to the file. `filename` Filename to write. `data` Data buffer to write. `binary` Set to ``True`` to indicate a binary file. Returns boolean. """ try: fla...
python
def writefile(filename, data, binary=False): """ Write the provided data to the file. `filename` Filename to write. `data` Data buffer to write. `binary` Set to ``True`` to indicate a binary file. Returns boolean. """ try: fla...
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train
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xtrementl/focus
focus/common.py
which
def which(name): """ Returns the full path to executable in path matching provided name. `name` String value. Returns string or ``None``. """ # we were given a filename, return it if it's executable if os.path.dirname(name) != '': if not os.path.isdir(name) and...
python
def which(name): """ Returns the full path to executable in path matching provided name. `name` String value. Returns string or ``None``. """ # we were given a filename, return it if it's executable if os.path.dirname(name) != '': if not os.path.isdir(name) and...
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Returns the full path to executable in path matching provided name. `name` String value. Returns string or ``None``.
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https://github.com/xtrementl/focus/blob/cbbbc0b49a7409f9e0dc899de5b7e057f50838e4/focus/common.py#L75-L101
xtrementl/focus
focus/common.py
extract_app_paths
def extract_app_paths(values, app_should_exist=True): """ Extracts application paths from the values provided. `values` List of strings to extract paths from. `app_should_exist` Set to ``True`` to check that application file exists. Returns list of strings. ...
python
def extract_app_paths(values, app_should_exist=True): """ Extracts application paths from the values provided. `values` List of strings to extract paths from. `app_should_exist` Set to ``True`` to check that application file exists. Returns list of strings. ...
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Extracts application paths from the values provided. `values` List of strings to extract paths from. `app_should_exist` Set to ``True`` to check that application file exists. Returns list of strings. * Raises ``ValueError`` exception if value extraction fails.
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train
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xtrementl/focus
focus/common.py
shell_process
def shell_process(command, input_data=None, background=False, exitcode=False): """ Shells a process with the given shell command. `command` Shell command to spawn. `input_data` String to pipe to process as input. `background` Set to ``True`` to fork proce...
python
def shell_process(command, input_data=None, background=False, exitcode=False): """ Shells a process with the given shell command. `command` Shell command to spawn. `input_data` String to pipe to process as input. `background` Set to ``True`` to fork proce...
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train
https://github.com/xtrementl/focus/blob/cbbbc0b49a7409f9e0dc899de5b7e057f50838e4/focus/common.py#L192-L249
xtrementl/focus
focus/common.py
to_utf8
def to_utf8(buf, errors='replace'): """ Encodes a string into a UTF-8 compatible, ASCII string. `buf` string or unicode to convert. Returns string. * Raises a ``UnicodeEncodeError`` exception if encoding failed and `errors` isn't set to 'replace'. """ if...
python
def to_utf8(buf, errors='replace'): """ Encodes a string into a UTF-8 compatible, ASCII string. `buf` string or unicode to convert. Returns string. * Raises a ``UnicodeEncodeError`` exception if encoding failed and `errors` isn't set to 'replace'. """ if...
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Encodes a string into a UTF-8 compatible, ASCII string. `buf` string or unicode to convert. Returns string. * Raises a ``UnicodeEncodeError`` exception if encoding failed and `errors` isn't set to 'replace'.
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xtrementl/focus
focus/common.py
from_utf8
def from_utf8(buf, errors='replace'): """ Decodes a UTF-8 compatible, ASCII string into a unicode object. `buf` string or unicode string to convert. Returns unicode` string. * Raises a ``UnicodeDecodeError`` exception if encoding failed and `errors` isn't set to 'rep...
python
def from_utf8(buf, errors='replace'): """ Decodes a UTF-8 compatible, ASCII string into a unicode object. `buf` string or unicode string to convert. Returns unicode` string. * Raises a ``UnicodeDecodeError`` exception if encoding failed and `errors` isn't set to 'rep...
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Decodes a UTF-8 compatible, ASCII string into a unicode object. `buf` string or unicode string to convert. Returns unicode` string. * Raises a ``UnicodeDecodeError`` exception if encoding failed and `errors` isn't set to 'replace'.
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train
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dugan/coverage-reporter
coverage_reporter/options.py
Option.get
def get(self, value, cfg=None): """ Returns value for this option from either cfg object or optparse option list, preferring the option list. """ if value is None and cfg: if self.option_type == 'list': value = cfg.get_list(self.name, None) else: ...
python
def get(self, value, cfg=None): """ Returns value for this option from either cfg object or optparse option list, preferring the option list. """ if value is None and cfg: if self.option_type == 'list': value = cfg.get_list(self.name, None) else: ...
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Returns value for this option from either cfg object or optparse option list, preferring the option list.
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dhain/potpy
potpy/wsgi.py
PathRouter.add
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python
def add(self, *args): """Add a path template and handler. :param name: Optional. If specified, allows reverse path lookup with :meth:`reverse`. :param template: A string or :class:`~potpy.template.Template` instance used to match paths against. Strings will be wrapped in...
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train
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dhain/potpy
potpy/wsgi.py
PathRouter.reverse
def reverse(self, *args, **kwargs): """Look up a path by name and fill in the provided parameters. Example: >>> handler = lambda: None # just a bogus handler >>> router = PathRouter(('post', '/posts/{slug}', handler)) >>> router.reverse('post', slug='my-post') ...
python
def reverse(self, *args, **kwargs): """Look up a path by name and fill in the provided parameters. Example: >>> handler = lambda: None # just a bogus handler >>> router = PathRouter(('post', '/posts/{slug}', handler)) >>> router.reverse('post', slug='my-post') ...
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train
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dhain/potpy
potpy/wsgi.py
MethodRouter.match
def match(self, methods, request_method): """Check for a method match. :param methods: A method or tuple of methods to match against. :param request_method: The method to check for a match. :returns: An empty :class:`dict` in the case of a match, or ``None`` if there is no m...
python
def match(self, methods, request_method): """Check for a method match. :param methods: A method or tuple of methods to match against. :param request_method: The method to check for a match. :returns: An empty :class:`dict` in the case of a match, or ``None`` if there is no m...
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train
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axil/redissentry-core
redissentrycore/utils.py
humanize
def humanize(t): """ >>> print humanize(0) now >>> print humanize(1) in a minute >>> print humanize(60) in a minute >>> print humanize(61) in 2 minutes >>> print humanize(3600) in an hour >>> print humanize(3601) in 2 hours """ m, s = divmod(t, 60) if s: ...
python
def humanize(t): """ >>> print humanize(0) now >>> print humanize(1) in a minute >>> print humanize(60) in a minute >>> print humanize(61) in 2 minutes >>> print humanize(3600) in an hour >>> print humanize(3601) in 2 hours """ m, s = divmod(t, 60) if s: ...
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>>> print humanize(0) now >>> print humanize(1) in a minute >>> print humanize(60) in a minute >>> print humanize(61) in 2 minutes >>> print humanize(3600) in an hour >>> print humanize(3601) in 2 hours
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EventTeam/beliefs
src/beliefs/cells/sets.py
SetIntersectionCell.coerce
def coerce(self, value): """ Ensures that a value is a SetCell """ if hasattr(value, 'values') and hasattr(value, 'domain'): return value elif hasattr(value, '__iter__'): # if the values are consistent with the comparison's domains, then # copy...
python
def coerce(self, value): """ Ensures that a value is a SetCell """ if hasattr(value, 'values') and hasattr(value, 'domain'): return value elif hasattr(value, '__iter__'): # if the values are consistent with the comparison's domains, then # copy...
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EventTeam/beliefs
src/beliefs/cells/sets.py
SetIntersectionCell.same_domain
def same_domain(self, other): """ Cheap pointer comparison or symmetric difference operation to ensure domains are the same """ return self.domain == other.domain or \ len(self.domain.symmetric_difference(set(other.domain))) == 0
python
def same_domain(self, other): """ Cheap pointer comparison or symmetric difference operation to ensure domains are the same """ return self.domain == other.domain or \ len(self.domain.symmetric_difference(set(other.domain))) == 0
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EventTeam/beliefs
src/beliefs/cells/sets.py
SetIntersectionCell.is_equal
def is_equal(self, other): """ True iff all members are the same """ other = self.coerce(other) return len(self.get_values().symmetric_difference(other.get_values())) == 0
python
def is_equal(self, other): """ True iff all members are the same """ other = self.coerce(other) return len(self.get_values().symmetric_difference(other.get_values())) == 0
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EventTeam/beliefs
src/beliefs/cells/sets.py
SetIntersectionCell.is_contradictory
def is_contradictory(self, other): """ What does it mean for a set to contradict another? If a merge results in the empty set -- when both sets are disjoint. CONTRADICTION: self = {4} other = {3} NOT CONTRADICTION: self = {4} other = {3,4} NOT CONTRADICTION: self = {3,4}...
python
def is_contradictory(self, other): """ What does it mean for a set to contradict another? If a merge results in the empty set -- when both sets are disjoint. CONTRADICTION: self = {4} other = {3} NOT CONTRADICTION: self = {4} other = {3,4} NOT CONTRADICTION: self = {3,4}...
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train
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EventTeam/beliefs
src/beliefs/cells/sets.py
SetIntersectionCell.is_entailed_by
def is_entailed_by(self, other): """ Fewer members = more information (exception is empty set, which means all members of the domain) (1) when self is empty and others is not (equal to containing the entire domain) (2) when other contains more members than self ...
python
def is_entailed_by(self, other): """ Fewer members = more information (exception is empty set, which means all members of the domain) (1) when self is empty and others is not (equal to containing the entire domain) (2) when other contains more members than self ...
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EventTeam/beliefs
src/beliefs/cells/sets.py
SetIntersectionCell.merge
def merge(self, other): """ We can merge unless the merge results in an empty set -- a contradiction """ other = self.coerce(other) if self.is_equal(other): # pick among dependencies return self elif other.is_entailed_by(self): ...
python
def merge(self, other): """ We can merge unless the merge results in an empty set -- a contradiction """ other = self.coerce(other) if self.is_equal(other): # pick among dependencies return self elif other.is_entailed_by(self): ...
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EventTeam/beliefs
src/beliefs/cells/sets.py
SetUnionCell.merge
def merge(self, other): """ We can merge unless the merge results in an empty set -- a contradiction """ other = self.coerce(other) if self.is_equal(other): # pick among dependencies return self elif self.is_contradictory(other): ...
python
def merge(self, other): """ We can merge unless the merge results in an empty set -- a contradiction """ other = self.coerce(other) if self.is_equal(other): # pick among dependencies return self elif self.is_contradictory(other): ...
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We can merge unless the merge results in an empty set -- a contradiction
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bfontaine/firapria
firapria/pollution.py
get_indices
def get_indices(): """ Return a list of 3 integers representing EU indices for yesterday, today and tomorrow. """ doc = BeautifulSoup(urlopen(BASEURL)) divs = doc.select('.indices_txt') if not divs: return None sibling = divs[1].nextSibling if not sibling: return No...
python
def get_indices(): """ Return a list of 3 integers representing EU indices for yesterday, today and tomorrow. """ doc = BeautifulSoup(urlopen(BASEURL)) divs = doc.select('.indices_txt') if not divs: return None sibling = divs[1].nextSibling if not sibling: return No...
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Return a list of 3 integers representing EU indices for yesterday, today and tomorrow.
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heikomuller/sco-datastore
scodata/__init__.py
create_dir
def create_dir(directory): """Create given directory, if doesn't exist. Parameters ---------- directory : string Directory path (can be relative or absolute) Returns ------- string Absolute directory path """ if not os.access(directory, os.F_OK): os.makedirs...
python
def create_dir(directory): """Create given directory, if doesn't exist. Parameters ---------- directory : string Directory path (can be relative or absolute) Returns ------- string Absolute directory path """ if not os.access(directory, os.F_OK): os.makedirs...
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Create given directory, if doesn't exist. Parameters ---------- directory : string Directory path (can be relative or absolute) Returns ------- string Absolute directory path
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heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_create
def experiments_create(self, subject_id, image_group_id, properties): """Create an experiment object with subject, and image group. Objects are referenced by their unique identifiers. The API ensure that at time of creation all referenced objects exist. Referential consistency, however, ...
python
def experiments_create(self, subject_id, image_group_id, properties): """Create an experiment object with subject, and image group. Objects are referenced by their unique identifiers. The API ensure that at time of creation all referenced objects exist. Referential consistency, however, ...
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heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_fmri_create
def experiments_fmri_create(self, experiment_id, filename): """Create functional data object from given file and associate the object with the specified experiment. Parameters ---------- experiment_id : string Unique experiment identifier filename : File-type...
python
def experiments_fmri_create(self, experiment_id, filename): """Create functional data object from given file and associate the object with the specified experiment. Parameters ---------- experiment_id : string Unique experiment identifier filename : File-type...
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heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_fmri_delete
def experiments_fmri_delete(self, experiment_id): """Delete fMRI data object associated with given experiment. Raises ValueError if an attempt is made to delete a read-only resource. Parameters ---------- experiment_id : string Unique experiment identifier ...
python
def experiments_fmri_delete(self, experiment_id): """Delete fMRI data object associated with given experiment. Raises ValueError if an attempt is made to delete a read-only resource. Parameters ---------- experiment_id : string Unique experiment identifier ...
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Delete fMRI data object associated with given experiment. Raises ValueError if an attempt is made to delete a read-only resource. Parameters ---------- experiment_id : string Unique experiment identifier Returns ------- FMRIDataHandle Ha...
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heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_fmri_download
def experiments_fmri_download(self, experiment_id): """Download the fMRI data file associated with given experiment. Parameters ---------- experiment_id : string Unique experiment identifier Returns ------- FileInfo Information about fMRI...
python
def experiments_fmri_download(self, experiment_id): """Download the fMRI data file associated with given experiment. Parameters ---------- experiment_id : string Unique experiment identifier Returns ------- FileInfo Information about fMRI...
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train
https://github.com/heikomuller/sco-datastore/blob/7180a6b51150667e47629da566aedaa742e39342/scodata/__init__.py#L228-L251
heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_fmri_get
def experiments_fmri_get(self, experiment_id): """Get fMRI data object that is associated with the given experiment. Parameters ---------- experiment_id : string unique experiment identifier Returns ------- FMRIDataHandle Handle for fMRI ...
python
def experiments_fmri_get(self, experiment_id): """Get fMRI data object that is associated with the given experiment. Parameters ---------- experiment_id : string unique experiment identifier Returns ------- FMRIDataHandle Handle for fMRI ...
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Get fMRI data object that is associated with the given experiment. Parameters ---------- experiment_id : string unique experiment identifier Returns ------- FMRIDataHandle Handle for fMRI data object of None if (a) the experiment is unknown ...
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train
https://github.com/heikomuller/sco-datastore/blob/7180a6b51150667e47629da566aedaa742e39342/scodata/__init__.py#L253-L277
heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_fmri_upsert_property
def experiments_fmri_upsert_property(self, experiment_id, properties): """Upsert property of fMRI data object associated with given experiment. Raises ValueError if given property dictionary results in an illegal operation. Parameters ---------- experiment_id : string ...
python
def experiments_fmri_upsert_property(self, experiment_id, properties): """Upsert property of fMRI data object associated with given experiment. Raises ValueError if given property dictionary results in an illegal operation. Parameters ---------- experiment_id : string ...
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train
https://github.com/heikomuller/sco-datastore/blob/7180a6b51150667e47629da566aedaa742e39342/scodata/__init__.py#L279-L303
heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_list
def experiments_list(self, limit=-1, offset=-1): """Retrieve list of all experiments in the data store. Parameters ---------- limit : int Limit number of results in returned object listing offset : int Set offset in list (order as defined by object store)...
python
def experiments_list(self, limit=-1, offset=-1): """Retrieve list of all experiments in the data store. Parameters ---------- limit : int Limit number of results in returned object listing offset : int Set offset in list (order as defined by object store)...
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Retrieve list of all experiments in the data store. Parameters ---------- limit : int Limit number of results in returned object listing offset : int Set offset in list (order as defined by object store) Returns ------- ObjectListing ...
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train
https://github.com/heikomuller/sco-datastore/blob/7180a6b51150667e47629da566aedaa742e39342/scodata/__init__.py#L320-L335
heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_predictions_attachments_create
def experiments_predictions_attachments_create(self, experiment_id, run_id, resource_id, filename, mime_type=None): """Attach a given data file with a model run. The attached file is identified by the resource identifier. If a resource with the given identifier already exists it will be overwrit...
python
def experiments_predictions_attachments_create(self, experiment_id, run_id, resource_id, filename, mime_type=None): """Attach a given data file with a model run. The attached file is identified by the resource identifier. If a resource with the given identifier already exists it will be overwrit...
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Attach a given data file with a model run. The attached file is identified by the resource identifier. If a resource with the given identifier already exists it will be overwritten. Parameters ---------- experiment_id : string Unique experiment identifier mod...
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train
https://github.com/heikomuller/sco-datastore/blob/7180a6b51150667e47629da566aedaa742e39342/scodata/__init__.py#L337-L369
heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_predictions_attachments_delete
def experiments_predictions_attachments_delete(self, experiment_id, run_id, resource_id): """Delete attached file with given resource identifier from a mode run. Raise ValueError if an image archive with the given resource identifier is attached to the model run instead of a data file. ...
python
def experiments_predictions_attachments_delete(self, experiment_id, run_id, resource_id): """Delete attached file with given resource identifier from a mode run. Raise ValueError if an image archive with the given resource identifier is attached to the model run instead of a data file. ...
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train
https://github.com/heikomuller/sco-datastore/blob/7180a6b51150667e47629da566aedaa742e39342/scodata/__init__.py#L371-L396
heikomuller/sco-datastore
scodata/__init__.py
SCODataStore.experiments_predictions_attachments_download
def experiments_predictions_attachments_download(self, experiment_id, run_id, resource_id): """Download a data file that has been attached with a successful model run. Parameters ---------- experiment_id : string Unique experiment identifier model_id : string...
python
def experiments_predictions_attachments_download(self, experiment_id, run_id, resource_id): """Download a data file that has been attached with a successful model run. Parameters ---------- experiment_id : string Unique experiment identifier model_id : string...
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train
https://github.com/heikomuller/sco-datastore/blob/7180a6b51150667e47629da566aedaa742e39342/scodata/__init__.py#L398-L427