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# Copyright 2008-2014 Nokia Solutions and Networks
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable l... | userzimmermann/robotframework-python3 | src/robot/model/statistics.py | Python | apache-2.0 | 2,605 | [
"VisIt"
] | 4ca4a5d4b3e5f9c72a7a2307c00360cda0c69e0e619b6e1920614574ba13d7ad |
#
# Author: Travis Oliphant 2002-2011 with contributions from
# SciPy Developers 2004-2011
#
from __future__ import division, print_function, absolute_import
import warnings
from scipy.special import comb
from scipy.misc.doccer import inherit_docstring_from
from scipy import special
from scipy import optim... | chaluemwut/fbserver | venv/lib/python2.7/site-packages/scipy/stats/_continuous_distns.py | Python | apache-2.0 | 106,333 | [
"Gaussian"
] | ebf05778c3fc561a1b6a153d373957b04c86a2c12f19d573305871547a40c3c5 |
#! /usr/bin/env python
#
# @BEGIN LICENSE
#
# Psi4: an open-source quantum chemistry software package
#
# Copyright (c) 2007-2022 The Psi4 Developers.
#
# The copyrights for code used from other parties are included in
# the corresponding files.
#
# This file is part of Psi4.
#
# Psi4 is free software; you can redistr... | psi4/psi4 | psi4/versioner.py | Python | lgpl-3.0 | 14,572 | [
"Psi4"
] | d3ca5dca960b4946fce2e6187aa6e4beb52ab8e151b423ec5815bdc10a696630 |
""" This is a test of the IntegrityDB
It supposes that the DB is present.
This is pytest!
"""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
# pylint: disable=invalid-name,wrong-import-position
import time
from DIRAC import gLogger
from DIRAC.Co... | ic-hep/DIRAC | tests/Integration/DataManagementSystem/Test_DataIntegrityDB.py | Python | gpl-3.0 | 3,495 | [
"DIRAC"
] | 9a05863d8e86b8b09b1214707d3fef9e96542244945c60c5840b090dac6ee319 |
# Copyright Iris contributors
#
# This file is part of Iris and is released under the LGPL license.
# See COPYING and COPYING.LESSER in the root of the repository for full
# licensing details.
"""Integration tests for pickling things."""
# Import iris.tests first so that some things can be initialised before
# importi... | bjlittle/iris | lib/iris/tests/integration/test_pickle.py | Python | lgpl-3.0 | 1,548 | [
"NetCDF"
] | 51b4fabb749789893a1aedd81c87bdbaddfe3eb927a2da287b68d2c76ccdd78d |
from os.path import abspath, basename, join, exists
from os.path import dirname
from os.path import relpath
from os import listdir, sep
from re import findall
from io import open
from ..staging import COMMAND_VERSION_FILENAME
from ..action_mapper import FileActionMapper
from ..action_mapper import path_type
from ..act... | jmchilton/pulsar | pulsar/client/staging/up.py | Python | apache-2.0 | 17,204 | [
"Galaxy"
] | 785d45c7558af4f6fa5d4ffe4349942c9a886e79e1ced47cbe615753b4528e76 |
import numpy as np
class AdalineGD:
''' ADAptive LInear NEuron classifier.
Parameeters
---------------
eta : float
Learning rate (0.0~1.0)
n_iter : int
Passes over the training dataset.
Attributes
---------------
w_ : ld-array
Weights after fitting
error... | stoneflyop1/py_machine_learning | ch02/adaline.py | Python | mit | 1,649 | [
"NEURON"
] | 501928a40d36d2771bb8873500823fbcb210d54fc0ff584509608bf267ea6584 |
#!/usr/bin/env python
"""
Install.py tool to download, compile, and setup the kim-api library
used to automate the steps described in the README file in this dir
"""
from __future__ import print_function
import sys, os, subprocess, shutil
from argparse import ArgumentParser
sys.path.append('..')
from install_helpers... | akohlmey/lammps | lib/kim/Install.py | Python | gpl-2.0 | 7,085 | [
"LAMMPS",
"OpenKIM"
] | c77328aa9f0845e398853ea300aff14edcc6c3b3797972f97b29708167f40edb |
from __future__ import absolute_import
# emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil -*-
# vi: set ft=python sts=4 ts=4 sw=4 et:
import numpy as np
from .transform import Transform
from .affine import apply_affine
from ._register import _apply_polyaffine
TINY_SIGMA = 1e-200
class PolyAffine(... | alexis-roche/nireg | nireg/polyaffine.py | Python | bsd-3-clause | 4,605 | [
"Gaussian"
] | fc56c784f8ae179a1d44ec0f4232b184a4a3c0549cf43c01b7cf91e0cd544117 |
#!/usr/bin/env python
"""
Artificial Intelligence for Humans
Volume 3: Deep Learning and Neural Networks
Python Version
http://www.aifh.org
http://www.jeffheaton.com
Code repository:
https://github.com/jeffheaton/aifh
Copyright 2015 by Jeff Heaton
Licensed under the Apache License, V... | PeterLauris/aifh | vol3/vol3-python-examples/lib/aifh/mnist.py | Python | apache-2.0 | 1,933 | [
"VisIt"
] | 4f6c220ac94162fe92f7e69e54dc60e235c9af3da6b0e7cdb22e9ead79bb420e |
## @package shesha.config.PCENTROIDER
## @brief Param_centroider class definition
## @author COMPASS Team <https://github.com/ANR-COMPASS>
## @version 5.2.1
## @date 2022/01/24
## @copyright GNU Lesser General Public License
#
# This file is part of COMPASS <https://anr-compass.github.io/compass/>
#
# ... | ANR-COMPASS/shesha | shesha/config/PCENTROIDER.py | Python | gpl-3.0 | 9,634 | [
"Gaussian"
] | c7ddf5dc274ba70e91918d9b485b755d5b7a1d8d10ec2ab974fa029c8545751a |
"""
Module with support functions for morphology
"""
from __future__ import division
from __future__ import unicode_literals
from __future__ import print_function
from __future__ import absolute_import
# Code adapted from https://github.com/ahwillia/PyNeuron-Toolbox under MIT license
from builtins import zip
from b... | Neurosim-lab/netpyne | netpyne/support/morphology.py | Python | mit | 18,635 | [
"NEURON"
] | a506323ff682655b0588615510a450f609d51fd54f601977f8ace5fba059472a |
# This code is part of Ansible, but is an independent component.
# This particular file snippet, and this file snippet only, is BSD licensed.
# Modules you write using this snippet, which is embedded dynamically by Ansible
# still belong to the author of the module, and may assign their own license
# to the complete wo... | wenottingham/ansible | lib/ansible/module_utils/basic.py | Python | gpl-3.0 | 95,220 | [
"VisIt"
] | ef181d2a3e826c194de948d258f7a0c8fae26a4481a32c06be62c2d2c5f8d70e |
# Copyright 2018 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | kevin-coder/tensorflow-fork | tensorflow/tools/compatibility/tf_upgrade_v2_test.py | Python | apache-2.0 | 65,711 | [
"Gaussian"
] | de848678cb97b66a14d148f2623bc39322948ceb56ee015f16d5a4ba5973d22a |
#!/usr/bin/env python3
"""
Copyright 2020 Paul Willworth <ioscode@gmail.com>
This file is part of Galaxy Harvester.
Galaxy Harvester is free software: you can redistribute it and/or modify
it under the terms of the GNU Affero General Public License as published by
the Free Software Foundation, either version 3 ... | pwillworth/galaxyharvester | html/getSchematicList.py | Python | gpl-3.0 | 7,494 | [
"Galaxy"
] | 99a776dc6ea11029129f9c33a1a38b6f0b0f4dc8afd05840f4c17a4b806df620 |
import types_g
import hextools
import logging
import os
import re
import shlex
import subprocess
TYPE_SIM = 0
TYPE_USIM = 1
#TODO: try to use types.fidFromPath(self.simFiles.findFileFromName('EF_ARR'))
EF_ARR_MF = 0x2F06
EF_ARR = 0x6F06
INVALID_RECORD_NUMBER = 0
DEFAULT_APP_AID = [0xA0,0x00,0x00,0x00,0x87,0x10,0x09... | kamwar/simLAB | util/types.py | Python | gpl-2.0 | 22,188 | [
"ADF"
] | 2ce4dbd676cb835eac2a2ca2a12e466795e8836dd60e060945525e5e5fb9252e |
# Generated by the protocol buffer compiler. DO NOT EDIT!
# source: google/cloud/websecurityscanner_v1alpha/proto/crawled_url.proto
import sys
_b = sys.version_info[0] < 3 and (lambda x: x) or (lambda x: x.encode("latin1"))
from google.protobuf import descriptor as _descriptor
from google.protobuf import message as ... | dhermes/google-cloud-python | websecurityscanner/google/cloud/websecurityscanner_v1alpha/proto/crawled_url_pb2.py | Python | apache-2.0 | 4,916 | [
"VisIt"
] | 95913c7f4f5bccc8fcd767be670e050bab4ddb55f0d2ba1f3b810f495e192c87 |
# class generated by DeVIDE::createDeVIDEModuleFromVTKObject
from module_kits.vtk_kit.mixins import SimpleVTKClassModuleBase
import vtk
class vtkParticleReader(SimpleVTKClassModuleBase):
def __init__(self, module_manager):
SimpleVTKClassModuleBase.__init__(
self, module_manager,
vtk... | chrisidefix/devide | modules/vtk_basic/vtkParticleReader.py | Python | bsd-3-clause | 484 | [
"VTK"
] | 5901b9de031e5c8691ff397c2e329d7cb3c4ddccc45071c377580f91b0d57001 |
"""
===========================
Compare normalization types
===========================
This example illustrates the effect of the different implemented
normalizations. First, the true PAC is estimated, then this is the surrogate
distribution that is estimated (i.e the PAC that could be obtained by chance).
Finally, t... | EtienneCmb/tensorpac | examples/pac/plot_compare_normalizations.py | Python | bsd-3-clause | 3,134 | [
"Gaussian"
] | 419809f923e413bc13f64e5a5951432c5f65512b1dcea6dc050d4f6a5835af94 |
#!/usr/bin/env python
# Copyright (C) 2004 CCLRC & NERC( Natural Environment Research Council ).
# This software may be distributed under the terms of the
# Q Public License, version 1.0 or later. http://ndg.nerc.ac.uk/public_docs/QPublic_license.txt
"""
cdms_to_na.py
=============
Holds the class CDMS... | eufarn7sp/egads-eufar | egads/thirdparty/nappy/contrib/aircraft/old_na_to_nc_with_aircraft.py | Python | bsd-3-clause | 31,533 | [
"NetCDF"
] | cb821766d8bb7799b78890fc68177dfc1221593283fb179649941cea530f574f |
# -*- coding: utf-8 -*-
"""
Acceptance tests for Video.
"""
from nose.plugins.attrib import attr
from unittest import skipIf, skip
from ..helpers import UniqueCourseTest, is_youtube_available, YouTubeStubConfig
from ...pages.lms.video.video import VideoPage
from ...pages.lms.tab_nav import TabNavPage
from ...pages.lms... | beni55/edx-platform | common/test/acceptance/tests/video/test_video_module.py | Python | agpl-3.0 | 36,624 | [
"VisIt"
] | 879c4fdfa571ca84fc4020ae00f03d7f91489ca4af338115f894e2168321b36a |
#
# Copyright (c) 2015 nexB Inc. and others. All rights reserved.
# http://nexb.com and https://github.com/nexB/scancode-toolkit/
# The ScanCode software is licensed under the Apache License version 2.0.
# Data generated with ScanCode require an acknowledgment.
# ScanCode is a trademark of nexB Inc.
#
# You may not use... | vinodpanicker/scancode-toolkit | tests/scancode/test_utils.py | Python | apache-2.0 | 3,178 | [
"VisIt"
] | c9b0330f75a0c3c69c839e06d0195590a1591171e707840620e4e8a0888dc959 |
import pickle
import gzip
import os, sys, errno
import time
import math
import glob
import struct
# numpy & theano imports need to be done in this order (only for some numpy installations, not sure why)
import numpy
# we need to explicitly import this in some cases, not sure why this doesn't get imported with numpy ... | bajibabu/merlin | src/work_in_progress/oliver/mdn_synth.py | Python | apache-2.0 | 30,030 | [
"Gaussian",
"NEURON"
] | d3dd589dc0ccb97233b6a456b3221100a124c2e32b3b4634af3956f1c106af3b |
########################################################################
# File : SiteDirector.py
# Author : A.T., F.S.
########################################################################
""" The Site Director is an agent performing pilot job submission to particular sites/Computing Elements.
.. literalincl... | chaen/DIRAC | WorkloadManagementSystem/Agent/SiteDirector.py | Python | gpl-3.0 | 59,280 | [
"DIRAC"
] | 08e16d631accd554e9c3b7750b5199416082b8e749052f16bc30082a7c40f98e |
'''
Created on 2017. 5. 17.
@author: Byoungho Kang
- (3,4) matrix, (4,6) matrix를 feed 받아 matrix multiply 하는 model 생성하기
- feed 값은 Gaussian Distribution에서 Random 추출하기 (numpy.random.randn(d0, d1, ..., dn))
'''
import numpy as np
import tensorflow as tf
'''
Initialize Tensors
'''
x1 = tf.placeholder(tf.f... | medit74/DeepLearning | MyTensorflow/MyTensorBasic/mytensor_quiz.py | Python | apache-2.0 | 717 | [
"Gaussian"
] | 7639014245ed6a892d17029034a5bb81f1802a3108c2c3deee7dada5365fb411 |
# coding: utf8
{
'': '',
' Quotas: %(quotas)s x%(quota_amount).2f': ' Quotas: %(quotas)s x%(quota_amount).2f',
' Transaction number: %s': ' Transaction number: %s',
'"update" is an optional expression like "field1=\'newvalue\'". You cannot update or delete the results of a JOIN': '"update" is an optional expression lik... | reingart/erplibre.app | languages/es-es.py | Python | agpl-3.0 | 34,259 | [
"VisIt"
] | ac29d6404e1e664560c9b523b16402f6d68d08119d7e7040c76504d9eb087448 |
#!/usr/bin/env python3
#* This file is part of the MOOSE framework
#* https://www.mooseframework.org
#*
#* All rights reserved, see COPYRIGHT for full restrictions
#* https://github.com/idaholab/moose/blob/master/COPYRIGHT
#*
#* Licensed under LGPL 2.1, please see LICENSE for details
#* https://www.gnu.org/licenses/lgp... | nuclear-wizard/moose | python/peacock/Execute/ConsoleOutputViewerPlugin.py | Python | lgpl-2.1 | 2,332 | [
"MOOSE"
] | eb74b8c13f4d485736f5d12924f26cf2358b0ff6ca09cbe5a4dbebbdb19e1233 |
"""
This is our testing framework.
Goals:
* it should be compatible with py.test and operate very similarly
(or identically)
* doesn't require any external dependencies
* preferably all the functionality should be in this file only
* no magic, just import the test file and execute the test functions, that's it
* po... | Mitchkoens/sympy | sympy/utilities/runtests.py | Python | bsd-3-clause | 79,087 | [
"VisIt"
] | 7e4ff277b8e72e66d8d4796ff37ad566aa4c54cc7f7383d11063c198090b8a3f |
class a:
"""float division of arr1 by arr2. returns
lim instead of yeilding a zero error"""
class b:
"""replaces elements set to lim in arr with a value set as
being an order of magnitude higher than the square of the
maximum value of arr. converts all elements of arr to
numpy.float64 dtype"""
class c:
"""di... | janhui/test_engine | release/rastercalc/DocStrings.py | Python | lgpl-2.1 | 1,417 | [
"NetCDF"
] | 3f438676a7bcc2c7fe8977c5460e3ab9990d297ab721a0cad3644a7a52b54539 |
# Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | jalexvig/tensorflow | tensorflow/contrib/autograph/converters/control_flow.py | Python | apache-2.0 | 11,455 | [
"VisIt"
] | 01c9e2ac699586dd7a49a4c7ad9deed34f3de9447676e54d8ec223251886eb43 |
# ============================================================================
#
# Copyright (C) 2007-2012 Conceptive Engineering bvba. All rights reserved.
# www.conceptive.be / project-camelot@conceptive.be
#
# This file is part of the Camelot Library.
#
# This file may be used under the terms of the GNU General... | jeroendierckx/Camelot | camelot/model/authentication.py | Python | gpl-2.0 | 3,959 | [
"VisIt"
] | 264e93aba1c37ddf1de15395b90e4b0dbc3d90c3cfe966462cc918fd0786262a |
"""Functionality to query and extract information from aligned BAM files.
"""
from __future__ import print_function
import collections
import os
import signal
import subprocess
import numpy
import pybedtools
import pysam
import toolz as tz
from six.moves import zip_longest
from bcbio import broad, utils
from bcbio.ba... | vladsaveliev/bcbio-nextgen | bcbio/bam/__init__.py | Python | mit | 26,181 | [
"BWA",
"pysam"
] | a5857ca0de362f690ddfd807d4823720cb4f4020829e38217560246f18f27d75 |
# ----------------------------------------------------------------------------
# Copyright (c) 2013--, scikit-bio development team.
#
# Distributed under the terms of the Modified BSD License.
#
# The full license is in the file COPYING.txt, distributed with this software.
# --------------------------------------------... | demis001/scikit-bio | skbio/io/format/tests/test_clustal.py | Python | bsd-3-clause | 10,849 | [
"scikit-bio"
] | 800fefead63d87df94be26499f8053918041ddb37f9d328e5d1790ba342829b3 |
"""Attempt to generate templates for module reference with Sphinx
XXX - we exclude extension modules
To include extension modules, first identify them as valid in the
``_uri2path`` method, then handle them in the ``_parse_module`` script.
We get functions and classes by parsing the text of .py files.
Alternatively w... | pacoqueen/ginn | extra/install/ipython2/ipython-5.10.0/docs/sphinxext/apigen.py | Python | gpl-2.0 | 16,793 | [
"VisIt"
] | 3a79a79c518cbb59c66cb5944b9326686120328c1f9ec3a1e588a7af69ea4e89 |
'''
Created on Jan 24, 2016
@author: Dan
'''
import random
import galaxy
class Universe(object):
'''
classdocs
'''
def __init__(self, seed=None):
'''
Constructor
'''
self.seed = seed
self.galaxies = []
self.cre... | JackAnansi/WorldBuilder | src/universe.py | Python | gpl-3.0 | 1,038 | [
"Galaxy"
] | c7dedc3e4ecad5326f9628be80f9816127fe7a83f4ce518c4e4639a0fc3b2b6e |
# -*- coding: utf-8 -*-
# Copyright (C) Brian Moe (2013-2014), Duncan Macleod (2014-)
#
# This file is part of LIGO CIS Core.
#
# LIGO CIS Core is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 ... | lscsoft/cis.server | cisserver/tests.py | Python | gpl-3.0 | 832 | [
"Brian",
"MOE"
] | df5920119ba0dfed7a3adb6c3c4d1eb99aa4ead4eebda96600349248487149fd |
# Copyright (c) 2015-2018 by the parties listed in the AUTHORS file.
# All rights reserved. Use of this source code is governed by
# a BSD-style license that can be found in the LICENSE file.
import re
from toast.op import Operator
import toast.rng as rng
import toast.timing as timing
class OpGainScrambler(Operat... | tskisner/pytoast | src/python/tod/gainscrambler.py | Python | bsd-2-clause | 3,193 | [
"Gaussian"
] | e53650bcd220b8b3ce06e7cbf7d16bb16b9c3faab0dc3d4c34c210953de3b865 |
# -*- coding:utf-8 -*-
import os
from error import configure_errorhandlers
from . import blueprint
from schedule import CelerySchedule
from koushihime.utils import Env
env = Env()
basedir = os.path.abspath(os.path.dirname(__file__))
class Config(CelerySchedule):
SECRET_KEY = env.get('SECRET_KEY') or 'the answe... | ethe/KoushiHime | koushihime/config/__init__.py | Python | artistic-2.0 | 2,020 | [
"MOE"
] | b49d36d6da3d7cf81dd6005f9e2e9a6991dfc47a57543382762d4826283f5805 |
"""setuptools.command.bdist_egg
Build .egg distributions"""
from distutils.errors import DistutilsSetupError
from distutils.dir_util import remove_tree, mkpath
from distutils import log
from types import CodeType
import sys
import os
import re
import textwrap
import marshal
import warnings
from setuptools.extern imp... | openprivacy/.emacs.d | elpy/rpc-venv/lib/python3.8/site-packages/setuptools/command/bdist_egg.py | Python | gpl-2.0 | 18,482 | [
"VisIt"
] | a5563de7e9ec334535fd098ad3578b45e763583c3daee130ad9c4169ef05c990 |
import os
from dateutil import parser
from django.conf import settings
from hs_core.models import ResourceFile
from hs_core.hydroshare import add_resource_files
from hs_core.views.utils import create_folder, move_or_rename_file_or_folder, zip_folder, \
unzip_file, remove_folder
from hs_core.views.utils import run... | FescueFungiShare/hydroshare | hs_core/testing.py | Python | bsd-3-clause | 35,732 | [
"NetCDF"
] | 83325520321907e9ea768cc1267ad37d3867e7b493f389d4534fdb13f683c46a |
import math
import matplotlib
matplotlib.use('Agg')
from matplotlib.backends.backend_agg import FigureCanvasAgg as FigureCanvas
from matplotlib.figure import Figure
import matplotlib.pyplot as plt
from matplotlib import colors
import StringIO
import numpy
from os import listdir
from os.path import basename
import json
... | sostenibilidad-unam/geo-value-function | server.py | Python | gpl-3.0 | 29,783 | [
"Gaussian"
] | fe0190285fe7810fbeda42dfe09f82f98ed4fdf7bfa53fac13710958746ffd6b |
import os
import os.path
import sys
sys.path.insert(0, os.path.abspath('lib'))
from ansible.release import __version__, __author__
try:
from setuptools import setup, find_packages
except ImportError:
print("Ansible now needs setuptools in order to build. Install it using"
" your package manager (usua... | napkindrawing/ansible | setup.py | Python | gpl-3.0 | 3,727 | [
"Galaxy"
] | 612b0d348c5a755cc2ae5d029374b90259b069a7a337d9718678bc58333dd223 |
import numpy as np
import os
try:
import netCDF4 as netCDF
except:
import netCDF3 as netCDF
import matplotlib.pyplot as plt
import time
from datetime import datetime
from matplotlib.dates import date2num, num2date
import pyroms
import pyroms_toolbox
import _remapping
class nctime(object):
pass
def remap_clm(... | kshedstrom/pyroms | examples/Palau_HYCOM/remap_clm.py | Python | bsd-3-clause | 4,939 | [
"NetCDF"
] | df8041b29ced40503e11a2fbb8f39b4e8cf502d785d5f3814b4e9e0c2dd96d1c |
# -*- coding: utf-8 -*-
"""
ORCA Open Remote Control Application
Copyright (C) 2013-2020 Carsten Thielepape
Please contact me by : http://www.orca-remote.org/
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as publish... | thica/ORCA-Remote | src/ORCA/actions/GuiControl.py | Python | gpl-3.0 | 6,801 | [
"ORCA"
] | 088638aae861f0e24ea7d7e2573f88669f2ff08e45e5cef2ddec5a0f61b7698b |
#!/usr/bin/python3
#
# Copyright (c) 2012 Mikkel Schubert <MikkelSch@gmail.com>
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
... | MikkelSchubert/paleomix | paleomix/nodes/sequences.py | Python | mit | 5,576 | [
"pysam"
] | e43ffa3ce4d202e014a25697240f0bb9509c1a6693863cfba3bc40e05327897f |
"""
Courseware views functions
"""
import json
import logging
import urllib
from collections import OrderedDict
from datetime import datetime
import analytics
import newrelic.agent
from django.conf import settings
from django.contrib.auth.decorators import login_required
from django.contrib.auth.models import User, A... | devs1991/test_edx_docmode | lms/djangoapps/courseware/views.py | Python | agpl-3.0 | 71,626 | [
"VisIt"
] | 490c9bc4dd561e20989031b5ac132038ca9f5200009ba3f68aaac92a9adfaa98 |
from __future__ import absolute_import, division, print_function
import numbers
import os
import re
import subprocess
import sys
import decimal
import warnings
from functools import partial
from operator import attrgetter
from itertools import chain
from collections import Iterator
from datetime import datetime, date... | quantopian/odo | odo/backends/sql.py | Python | bsd-3-clause | 34,206 | [
"VisIt"
] | 89c577fa43cb1c30cfe5779e7777d5eb87c9802d3e73708a175f119234a96027 |
"""
This class is used to define the plot using the plot attributes.
"""
from DIRAC import S_OK, gLogger
from DIRAC.MonitoringSystem.Client.Types.RMSMonitoring import RMSMonitoring
from DIRAC.MonitoringSystem.private.Plotters.BasePlotter import BasePlotter
class RMSMonitoringPlotter(BasePlotter):
"""
.. cl... | DIRACGrid/DIRAC | src/DIRAC/MonitoringSystem/private/Plotters/RMSMonitoringPlotter.py | Python | gpl-3.0 | 3,131 | [
"DIRAC"
] | 51965a60dd46b1828dea137f0ffeacd1ad2f91d99d434b5f99920efa83166b08 |
#!/usr/bin/env python
"""
synfig_fileformat.py
Synfig file format utilities
Copyright (C) 2011 Nikita Kitaev
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at y... | danieljabailey/inkscape_experiments | share/extensions/synfig_fileformat.py | Python | gpl-2.0 | 7,140 | [
"Gaussian"
] | 0e9e01a8f8feaf66c94eec2c871c2b5999ee60d44961156fa9eee42251c9613d |
import os
from os.path import dirname, join
import numpy as np
from matplotlib import pyplot as plt
from matplotlib.testing.decorators import image_comparison
from matplotlib.testing.compare import compare_images
from iminuit import Minuit
from probfit.plotting import draw_pdf, draw_compare_hist
from probfit.pdf import... | mtresch/probfit | test/testplotting.py | Python | mit | 8,216 | [
"Gaussian"
] | 5ca4eb3b1138874daa4f96a0213bb1b2430acb81af5fbda8a801c57abfcdbe0e |
# -*- Mode: Python; coding: utf-8 -*-
# vi:si:et:sw=4:sts=4:ts=4
##
## Copyright (C) 2007-2010 Async Open Source <http://www.async.com.br>
## All rights reserved
##
## This program is free software; you can redistribute it and/or modify
## it under the terms of the GNU General Public License as published by
## the Fre... | andrebellafronte/stoq | stoqlib/domain/payment/views.py | Python | gpl-2.0 | 14,018 | [
"VisIt"
] | 0a143c6a7a3a485888aa96f99ccacc42aa7a4d5bbeda8b19135148117dcb5bcc |
# Licensed under a 3-clause BSD style license - see LICENSE.rst
import warnings
import numpy as np
from numpy.core.multiarray import normalize_axis_index
from astropy.units import Quantity
from astropy.utils import isiterable
from astropy.utils.exceptions import AstropyUserWarning
from astropy.stats._fast_sigma_clip... | aleksandr-bakanov/astropy | astropy/stats/sigma_clipping.py | Python | bsd-3-clause | 38,912 | [
"Gaussian"
] | 2cd9238a27592bebfca1debec90ec13a2b2e6bcf672b7ba558f50c2a356c8418 |
# -*- coding: utf-8 -*-
# vi:si:et:sw=4:sts=4:ts=4
##
## Copyright (C) 2012 Async Open Source <http://www.async.com.br>
## All rights reserved
##
## This program is free software; you can redistribute it and/or modify
## it under the terms of the GNU General Public License as published by
## the Free Software Foundati... | andrebellafronte/stoq | stoqlib/gui/test/test_qualitytesteditor.py | Python | gpl-2.0 | 1,183 | [
"VisIt"
] | e06e2269a07de661556f669724bf38f7df6a4ca0fbbfc8aae0c817a9a3f7e09d |
#!/usr/bin/env python3
#pylint: disable=missing-docstring
#* This file is part of the MOOSE framework
#* https://www.mooseframework.org
#*
#* All rights reserved, see COPYRIGHT for full restrictions
#* https://github.com/idaholab/moose/blob/master/COPYRIGHT
#*
#* Licensed under LGPL 2.1, please see LICENSE for details
... | nuclear-wizard/moose | python/chigger/tests/utils/test_get_active_filenames.py | Python | lgpl-2.1 | 1,925 | [
"MOOSE"
] | 124bfef0e8a0f8426a0f9b36eb0c307f0f394f4b25abbc917aa2a1f988b7701f |
# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except jin compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by appl... | luotao1/Paddle | python/paddle/fluid/dygraph/parallel.py | Python | apache-2.0 | 30,694 | [
"MOE"
] | 701b0d4ee1f8cbe83de79d010ae0c1d6d07c26d91c3936ef5a976847094b38d2 |
# coding: utf-8
# Copyright (c) Pymatgen Development Team.
# Distributed under the terms of the MIT License.
import collections
import abc
import numpy as np
from pymatgen.core.spectrum import Spectrum
from pymatgen.util.plotting import add_fig_kwargs
"""
This module implements core classes for calculation of diff... | dongsenfo/pymatgen | pymatgen/analysis/diffraction/core.py | Python | mit | 7,550 | [
"CRYSTAL",
"pymatgen"
] | 3ab04f85a6786617c50711d3ffce54d234a7e592413c59e8dbdf714c506083cc |
# constants.py
#Part of the climlab package
#Brian Rose, University at Albany
#brose@albany.edu
"""Contains a collection of physical constants for the atmosphere and ocean.
.. literalinclude:: ../code_input_manual/constants.py
"""
from __future__ import division
from numpy import pi
a = 6.373E6 # Radius ... | cjcardinale/climlab | climlab/utils/constants.py | Python | mit | 3,432 | [
"Brian"
] | 6d086704ddf1aee4fc4a533d2052734d58ba01f2f09e9ec9792de0aea271fa9e |
# -*- coding: utf-8 -*-
# Copyright 2004-2020 Davide Alberani <da@erlug.linux.it>
# 2008-2018 H. Turgut Uyar <uyar@tekir.org>
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either ... | Vagab0nd/SiCKRAGE | lib3/imdb/parser/http/movieParser.py | Python | gpl-3.0 | 88,868 | [
"Brian"
] | 1bc6d3765b88f923b602181d67619e5a3f1ba740ca029a6fd9d695a8c5e3e1c5 |
import sys
import os
import traceback
import random
import getpass
import tarfile
from threading import Thread, RLock
from subprocess import Popen, PIPE
if(sys.hexversion < 0x03000000):
import Queue
else:
import queue as Queue
from p_code_input_output.c_data_set import SequenceManipulation, c_tar_f
from p_code_inpu... | viswimmer1/PythonGenerator | data/python_files/30094552/data_set.py | Python | gpl-2.0 | 20,428 | [
"Octopus"
] | e8d5febe0d8304ea174ac205b3eafbe1e3257f55e02fa5188463431bee2a10f9 |
# Include the Dropbox SDK libraries
from dropbox import client, rest, session
# Get your app key and secret from the Dropbox developer website
APP_KEY = #removed for security purposes
APP_SECRET = #removed for security purposes
# ACCESS_TYPE should be 'dropbox' or 'app_folder' as configured for your app
ACCESS_TYPE =... | levibostian/VSAS | docs/Risk assessment/dropbox_sessionUploader.py | Python | mit | 1,658 | [
"VisIt"
] | d499654a50c576c4b2b66d30cde44042eff571c309444a664d6345577f6498ae |
# $Id$
#
# Copyright (C) 2008-2011 Greg Landrum
#
# @@ All Rights Reserved @@
# This file is part of the RDKit.
# The contents are covered by the terms of the BSD license
# which is included in the file license.txt, found at the root
# of the RDKit source tree.
#
from rdkit import Chem
from rdkit import RDConfig... | jandom/rdkit | rdkit/Chem/Draw/MolDrawing.py | Python | bsd-3-clause | 23,238 | [
"RDKit"
] | 79faaa834b2b41096efc7d516a26705c008df5feffd96975b1445d2eaea36c25 |
# -*- coding: utf-8 -*-
#
# Copyright (c) 2017, the cclib development team
#
# This file is part of cclib (http://cclib.github.io) and is distributed under
# the terms of the BSD 3-Clause License.
"""Test the Nuclear method in cclib"""
import sys
import os
import re
import logging
import unittest
import numpy as np
... | ATenderholt/cclib | test/method/testnuclear.py | Python | bsd-3-clause | 5,592 | [
"Dalton",
"Gaussian",
"cclib"
] | c896dec1b1d0e2cb3a7b5a2bb6b482c7337c7847373291e6dc47092870b791e4 |
#!/usr/bin/env python3.5
# coding=utf-8
"""Threaded gps3 client"""
from __future__ import print_function
from threading import Thread
from time import sleep
try: # This kludge to get around imports with files and directories the same name.
import gps3 # Python 3
except ImportError:
from . import gps3 # Pyt... | wadda/gps3 | gps3/gps3threaded.py | Python | mit | 3,532 | [
"MOE"
] | 34df2a39bb8689de8f326c8767958c3d66fcb67951e9d539cf06618608f985de |
#! /usr/bin/env python3
# coding: utf-8
from __future__ import annotations
import base64
from collections.abc import Iterator
import hashlib
import hmac
import typing as t
import urllib.parse
from geopy.geocoders import Nominatim
import googlemaps
import requests
from gargbot_3000 import config
from gargbot_3000.log... | eirki/gargbot_3000 | gargbot_3000/journey/location_apis.py | Python | mit | 5,189 | [
"CASINO"
] | 4d57a5d6e26d36b6498fdf04e6ae8405a4504ad9cf5a3e54aef139e2c2446d0c |
# -*- coding: utf-8 -*-
"""
sphinx.writers.texinfo
~~~~~~~~~~~~~~~~~~~~~~
Custom docutils writer for Texinfo.
:copyright: Copyright 2007-2015 by the Sphinx team, see AUTHORS.
:license: BSD, see LICENSE for details.
"""
import re
import textwrap
from os import path
from six import itervalues
from... | WhySoGeeky/DroidPot | venv/lib/python2.7/site-packages/sphinx/writers/texinfo.py | Python | mit | 46,415 | [
"VisIt"
] | 755de15abd08c015130da9ad2518071945c7ab315d9044e0048f98ed084dead1 |
# -*- coding: utf-8 -*-
#
# Copyright (c) 2017, the cclib development team
#
# This file is part of cclib (http://cclib.github.io) and is distributed under
# the terms of the BSD 3-Clause License.
"""Unit tests for parser ccio module."""
import os
import tempfile
import unittest
import cclib
__filedir__ = os.path.... | gaursagar/cclib | test/io/testccio.py | Python | bsd-3-clause | 6,156 | [
"ADF",
"Dalton",
"GAMESS",
"Gaussian",
"Jaguar",
"MOPAC",
"Molpro",
"NWChem",
"ORCA",
"cclib"
] | 55046bd49a95b3590f27aaed56431414ddcca6c5a0271ed3863365ddca1a840b |
"""
Plot planes from joint analysis files.
Usage:
plot.py join <base_path>
plot.py plot <files>... [--output=<dir>]
Options:
--output=<dir> Output directory [default: ./frames]
"""
import h5py
import numpy as np
import matplotlib
matplotlib.use('Agg')
import matplotlib.pyplot as plt
import matplotlib.t... | maxhutch/rti-split-scales | process.py | Python | gpl-3.0 | 3,928 | [
"VisIt"
] | 68ba37825e80b17ffe27b7de8c2b9d0788cb59e0a6fe29a55daed3769c0c892d |
# -*- coding: utf-8 -*-
import os
import logging
import httplib2
from gtd_tasks import tasks_datamodel
from gtd_tasks import visitors
from gtd_tasks.gtd_model import Recipient
from apiclient.discovery import build
from django import forms
from django.contrib.auth.decorators import login_required
from django.core.ur... | Adnn/GTD_Tasks | gtd_django/gtasks/views.py | Python | mit | 5,691 | [
"VisIt"
] | 50d9e8d8fe5c3addc387bfe55d26df75ddf167a6d0235893d991362ebc2d7e2f |
"""
===================================
Simple 1D Kernel Density Estimation
===================================
This example uses the :class:`sklearn.neighbors.KernelDensity` class to
demonstrate the principles of Kernel Density Estimation in one dimension.
The first plot shows one of the problems with using histogram... | b1quint/samfp | samfp/tests/plot_kde_1d.py | Python | bsd-3-clause | 5,163 | [
"Gaussian"
] | 84c12d888c87f5d58b983e7ea956faa30007cac099c918a06ca44c5a36a63c48 |
#._cv_part guppy.etc.tkcursors
# A Tk window that shows what cursor shapes are available.
# Moving the mouse over the cursor name shows the cursor in that shape.
from Tkinter import *
def tkcursors(master=None):
if master is None:
root = Tk()
else:
root = master
for i, cursor in enumerate((
'X_cursor'... | vmanoria/bluemix-hue-filebrowser | hue-3.8.1-bluemix/desktop/core/ext-py/guppy-0.1.10/guppy/etc/tkcursors.py | Python | gpl-2.0 | 1,607 | [
"FLEUR"
] | 4a838579f1d56b32fd4175258686a7b7424b94460d51fbaa17aa83bdde95d7f5 |
import os
from collections import OrderedDict
from functools import partial
from concurrent.futures import ThreadPoolExecutor
from BCBio import GFF
from Bio.Seq import Seq
from Bio.SeqRecord import SeqRecord
from Bio.SeqFeature import SeqFeature, FeatureLocation
from .utils import sort
def write_gff_cluster(cluster... | bardin-lab/readtagger | readtagger/gff_io.py | Python | mit | 2,656 | [
"Biopython"
] | 0bbe058a6817a25d98d340b9c8556557dce35688cbfccff068597b4456ca6295 |
# -*- coding: utf-8 -*-
# vim: autoindent shiftwidth=4 expandtab textwidth=120 tabstop=4 softtabstop=4
###############################################################################
# OpenLP - Open Source Lyrics Projection #
# ------------------------------------------------------... | marmyshev/transitions | openlp/plugins/bibles/forms/booknamedialog.py | Python | gpl-2.0 | 6,287 | [
"Brian"
] | 24b461fe106a4bc481ca67bff37b051775fa3f80cd008ab15ad5d4fe9e815ea8 |
'''
description: Download KNMI radar hdf5 files (inside a tar archive) from ftp
license: APACHE 2.0
author: Ronald van Haren, NLeSC (r.vanharen@esciencecenter.nl)
'''
from netCDF4 import Dataset
from netCDF4 import num2date
import datetime
import numpy
from fm128_radar.write_fm128_radar import *
from... | ERA-URBAN/fm128_radar_knmi | fm128_radar_knmi/convert_to_ascii.py | Python | apache-2.0 | 12,157 | [
"NetCDF"
] | 72bf94ec95695557e1410a2afe60fa97def59ef0df1c24bbbee126f8665f7789 |
import ast
import astunparse
from utils import *
class IfVisitor(object):
u"""The If Vistor visits a BugNode, traverses it, and tests for common
antipatterns or dead code if the node is an If node
"""
def visit(self, node):
u"""runs all of the tests on the node"""
self.test_program_doe... | cbrentharris/pybugs | patterns/if.py | Python | mit | 4,331 | [
"VisIt"
] | 46e98dd6b012ccebb081d87a9fd2b9689fefb1bea76116c8f0018d47accd9d05 |
#
# https://github.com/atjacobs/PeakUtils adresinden alinmistir,
# bu kod Matlab dunyasinda iyi bilinen peakutils'in Python cevrimi
#
import numpy as np
from scipy import optimize
from scipy.integrate import simps
def indexes(y, thres=0.3, min_dist=1):
'''Peak detection routine.
Finds the peaks in *y* by taki... | burakbayramli/classnotes | compscieng/compscieng_1_30/peakutils.py | Python | gpl-3.0 | 4,934 | [
"Gaussian"
] | 59f93b60937d46c6dd5ad5238dbae205f335d88f4f137663ca78cab179839f58 |
import math
import numbers
import random
import warnings
from collections.abc import Sequence
from typing import Tuple, List, Optional
import torch
from torch import Tensor
try:
import accimage
except ImportError:
accimage = None
from . import functional as F
from .functional import InterpolationMode, _inter... | PaddlePaddle/models | tutorials/mobilenetv3_prod/Step1-5/mobilenetv3_ref/torchvision/transforms/transforms.py | Python | apache-2.0 | 82,264 | [
"Gaussian"
] | 97d29c8202a84f1b219fad007ff48a48b4eb7bb2a19c345de90e45798b0d8a3f |
#!/usr/bin/env python
##############################################################################################
#
#
# CMIP6_hybrid_regrid_emissions_N96e.py
#
#
# Requirements:
# Iris 1.10, time, cf_units, numpy
#
#
# This Python script has been written by N.L. Abraham as part of the UKCA Tutorials:
# http://... | acsis-project/emissions | emissions/python/CMIP6_hybrid/CMIP6_hybrid_regrid_CO_emissions_n96e_360d.py | Python | gpl-3.0 | 17,421 | [
"NetCDF"
] | 2d59e4c6ebfda9bb0a4ff7af3469b62f85dee28bd62506a355b68b287808e3df |
#!/usr/bin/env python
#
# Data manager for reference data for the 'humann' Galaxy tools
import argparse
import json
import subprocess
from datetime import date
from pathlib import Path
HUMANN_REFERENCE_DATA = {
"chocophlan": {
"full": "Full ChocoPhlAn for HUManN",
"DEMO": "Demo ChocoPhlAn for HUMan... | loraine-gueguen/tools-iuc | data_managers/data_manager_humann_database_downloader/data_manager/data_manager_humann_download.py | Python | mit | 8,023 | [
"Galaxy"
] | 9411c1f46aaacd1436123fad08412cf3fa38171a425d21de5e46b429c6687af0 |
import cherrypy
import demjson
from tickets import *
from mailing import sendMail#, sendNewTicketNotifications, sendEditTicketNotifications, sendNewCommentNotifications, sendDeleteNotifications
from postgres import getConnection
from security import *
from urls import setRoutes
from various import *
from webfaction im... | jmorel/Naphtaline | naphtaline.py | Python | mit | 49,932 | [
"VisIt"
] | ab57434fccbb10d10adc77da04d30dc689d1b079bb02a078552b17788620692f |
#!/usr/bin/python
# -*- coding: utf-8 -*-
#
# --- BEGIN_HEADER ---
#
# rmvgridowner - remove a vgrid owner
# Copyright (C) 2003-2015 The MiG Project lead by Brian Vinter
#
# This file is part of MiG.
#
# MiG is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License ... | heromod/migrid | mig/shared/functionality/rmvgridowner.py | Python | gpl-2.0 | 24,999 | [
"Brian"
] | 510580f1cb3d48b91a9f27df97027b19db6ab3d6cc2d3ebff6073ea1ba23e3ac |
# GromacsWrapper: setup.py
"""
:mod:`gromacs.setup` -- Setting up a Gromacs MD run
===================================================
Individual steps such as solvating a structure or energy minimization
are set up in individual directories. For energy minimization one
should supply appropriate mdp run input files; o... | PicoCentauri/GromacsWrapper | gromacs/setup.py | Python | gpl-3.0 | 46,658 | [
"GROMOS",
"Gromacs"
] | 247b025131a3ae842c46dfdfe344a605dc0b5021f6469504f84341dd3ebb087f |
"""GPML backend for Gaussian processes."""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import os
import numpy as np
from pprint import pprint
# MATLAB scripts
_gp_train_epoch = """
hyp = minimize(hyp, @gp, -{n_iter:d}, {inf}, {mean}, {cov}, {lik}, X_t... | alshedivat/kgp | kgp/backend/gpml.py | Python | mit | 8,999 | [
"Gaussian"
] | 8db84e5d7771e087ef4dd2d48abde2371974b718e5edfd002de9a72b8337856b |
from __future__ import print_function, division
"""
.. note::
These are the spectral modeling functions for SPLAT
"""
# imports: internal
import bz2
import copy
import glob
import gzip
import os
import requests
import shutil
import sys
import time
# imports: external
#import corner
import matplotlib; matplo... | aburgasser/splat | splat/model.py | Python | mit | 233,227 | [
"Gaussian"
] | da226b835517911814add7c5238b580e2becdd3497fe9422974d9a3b5a400b05 |
from __future__ import annotations
from datetime import (
datetime,
timedelta,
)
import warnings
from dateutil.relativedelta import ( # noqa:F401
FR,
MO,
SA,
SU,
TH,
TU,
WE,
)
import numpy as np
from pandas.errors import PerformanceWarning
from pandas import (
DateOffset,
... | pandas-dev/pandas | pandas/tseries/holiday.py | Python | bsd-3-clause | 17,143 | [
"COLUMBUS"
] | b32a5875be7d575272da1539f25a4fb24597dcf50b0c19803649b5eb4ecc6820 |
#!/usr/bin/python
# blastn tblastn blastx parser revised 14-1-2016.
# drosofff@gmail.com
import argparse
from collections import defaultdict
def Parser():
the_parser = argparse.ArgumentParser()
the_parser.add_argument('--blast', action="store", type=str, help="Path to the blast output (tabular format, 12 co... | chamaelj/tools-artbio | tools/msp_blastparser_and_hits/BlastParser_and_hits.py | Python | mit | 12,650 | [
"BLAST"
] | c8fe580ea67ba19eb7b25fc30972f9ca22e18ddfc56af9faf1ad24a5fcabe76c |
# coding=utf-8
# Copyright 2016 Pants project contributors (see CONTRIBUTORS.md).
# Licensed under the Apache License, Version 2.0 (see LICENSE).
from __future__ import (absolute_import, division, generators, nested_scopes, print_function,
unicode_literals, with_statement)
import ast
import in... | baroquebobcat/pants | src/python/pants/engine/rules.py | Python | apache-2.0 | 7,213 | [
"VisIt"
] | 7bd6706d16fb97e2c52d1f946ae520f5e4b5f9531f7845f242ddbf754bb714e2 |
from ANNarchy import *
setup(dt=0.1)
# ###########################################
# Neuron model
# ###########################################
CUBA = Neuron(
parameters="""
El = -49.0 : population
Vr = -60.0 : population
Vt = -50.0 : population
tau_m = 20.0 : popu... | ANNarchy/ANNarchy | examples/vogels_abbott/CUBA.py | Python | gpl-2.0 | 1,809 | [
"NEURON"
] | 43869c4ec30b00e46a9f23b1f96925d14fb54757a2256453d5ddf13d4846b6e2 |
#
# Copyright 2018 Red Hat | Ansible
#
# This file is part of Ansible
#
# Ansible is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# ... | shepdelacreme/ansible | lib/ansible/utils/module_docs_fragments/k8s_auth_options.py | Python | gpl-3.0 | 2,838 | [
"VisIt"
] | 417fa8a7b2613ae7c90086ad4d3194a396bcd4421f68ac0a2d73af074e581dc8 |
# Copyright 2009 Brian Quinlan. All Rights Reserved.
# Licensed to PSF under a Contributor Agreement.
"""Implements ThreadPoolExecutor."""
import atexit
from concurrent.futures import _base
import Queue as queue
import threading
import weakref
import sys
__author__ = 'Brian Quinlan (brian@sweetapp.com)'
# Workers a... | harlowja/pythonfutures | concurrent/futures/thread.py | Python | bsd-2-clause | 4,638 | [
"Brian"
] | 056d70843039a64586af12a25a0dd6cdc2b77427ae0ba5b98db1af04c1312e5a |
# This file is part of the myhdl_numeric library, a Python package for using
# Python as a Hardware Description Language.
#
# Copyright (C) 2015 Jase M. Gomez
#
# The myhdl_numeric library is free software; you can redistribute it and/or
# modify it under the terms of the GNU Lesser General Public License as
# pu... | jmgc/myhdl-numeric | myhdl/numeric/_bitarray.py | Python | lgpl-2.1 | 21,760 | [
"VisIt"
] | 8dcfd8bf6a58d7016d39925cf558a16f5f319b55ccbe07658c68fd8e2428d1ec |
# -*- coding: utf-8 -*-
"""upload_docs
Implements a Distutils 'upload_docs' subcommand (upload documentation to
PyPI's pythonhosted.org).
"""
import os
import socket
import zipfile
import tempfile
import sys
import shutil
from base64 import standard_b64encode
from pkg_resources import iter_entry_point... | Orav/kbengine | kbe/res/scripts/common/Lib/site-packages/setuptools/command/upload_docs.py | Python | lgpl-3.0 | 7,004 | [
"VisIt"
] | baa41c170cdf4dc58bdea2e8f2d61f65d3e785341a8e811266f6fe2b8d1da721 |
"""Support for control of ElkM1 tasks ("macros")."""
from homeassistant.components.scene import Scene
from . import DOMAIN as ELK_DOMAIN, ElkEntity, create_elk_entities
async def async_setup_platform(
hass, config, async_add_entities, discovery_info=None):
"""Create the Elk-M1 scene platform."""
if d... | MartinHjelmare/home-assistant | homeassistant/components/elkm1/scene.py | Python | apache-2.0 | 679 | [
"Elk"
] | eebfc504a98f50690b0f4b7f631dd5cb6b1906db9234b0488c91b5fe28757380 |
#! /usr/bin/python
# -*- coding: utf8 -*-
import tensorflow as tf
import time
from . import visualize
from . import utils
from . import files
from . import cost
from . import iterate
from . import ops
import numpy as np
from six.moves import xrange
import random, warnings
import copy
import inspect
# __all__ = [
# ... | luoxier/CycleGAN_Tensorlayer | tensorlayer/layers.py | Python | mit | 268,964 | [
"NEURON"
] | 410e5019e63f9aac954a847f92f6adbffd43590d209565c7667dbe1b79880a73 |
# Copyright 2017 The Meson development team
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
# http://www.apache.org/licenses/LICENSE-2.0
# Unless required by applicable law or agreed to ... | becm/meson | mesonbuild/dependencies/__init__.py | Python | apache-2.0 | 3,084 | [
"NetCDF"
] | d5bf18a022ce534031d6753886970459e300d8b1e6eb6262877f1c539aba64ca |
"""Core visualization operations."""
# Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
# Eric Larson <larson.eric.d@gmail.com>
# Joan Massich <mailsik@gmail.com>
# Guillaume Favelier <guillaume.favelier@gmail.com>
#
# License: Simplified BSD
import importlib
from conte... | adykstra/mne-python | mne/viz/backends/renderer.py | Python | bsd-3-clause | 4,971 | [
"Mayavi"
] | c4b471768355ced6089a45021c7097fa36cef7cd53e76e75977892bcfaf588c9 |
# -*- coding: utf-8 -*-
# vi:si:et:sw=4:sts=4:ts=4
##
## Copyright (C) 2011-2013 Async Open Source
##
## This program is free software; you can redistribute it and/or
## modify it under the terms of the GNU Lesser General Public License
## as published by the Free Software Foundation; either version 2
## of the Licens... | andrebellafronte/stoq | stoqlib/gui/widgets/hintedentry.py | Python | gpl-2.0 | 2,484 | [
"VisIt"
] | d287660178aea9f27652e752d9b5b3a8e3c30e6fd04803863c6c78fcb4a56e51 |
#
# Gramps - a GTK+/GNOME based genealogy program
#
# Copyright (C) 2004 Martin Hawlisch
# Copyright (C) 2005-2008 Donald N. Allingham
# Copyright (C) 2008 Brian G. Matherly
# Copyright (C) 2010 Jakim Friant
# Copyright (C) 2011 Michiel D. Nauta
#
# This program is free software; you can redistribut... | beernarrd/gramps | gramps/plugins/export/exportvcard.py | Python | gpl-2.0 | 12,904 | [
"Brian"
] | 3a6c1a77316341fa443df4d59c69e1e5d92ea7a02206f4c4aab52dce1e8237ed |
from __future__ import print_function
def get_band_extrema(input_file):
'''
Get the valence band maximum and conduction band minimum from VASP OUTCAR
Prints a warning in the case of partial occupancy.
Args:
input_file : String, the input file name
Returns:
list: list[0] = valence b... | WMD-group/MacroDensity | macrodensity/vasp_tools.py | Python | mit | 1,274 | [
"VASP"
] | 6aeceb8af548d43403a16aaf15a08976e6a0550ad9c904207489216ba7dc25f3 |
# flake8: noqa
"""
github.com/mikedh/trimesh
----------------------------
Library for importing, exporting and doing simple operations on triangular meshes.
"""
from . import ray
from . import util
from . import units
from . import poses
from . import graph
from . import sample
from . import repair
from . import conv... | mikedh/trimesh | trimesh/base.py | Python | mit | 97,834 | [
"Gaussian"
] | 762ab18b40a2da01a635c35ed2bfbcb6a97a268416a50d4ccfafd723d2896fc5 |
# -*- coding: utf-8 -*-
#
# Collection of g2g utility functions and classes
#
import bz2
import gzip
import os
import time
import urllib
from subprocess import Popen
from pysam import tabix_compress, faidx, tabix_index
from . import G2GValueError
def delete_file(file_name):
"""
:param file_name:
:retu... | everestial/g2gtools | g2gtools/g2g_fileutils.py | Python | gpl-3.0 | 3,737 | [
"pysam"
] | e1a262e546a5b2736523cc7ce557f963be2d10fc2ad8bf97a0246c5f8951a16a |
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