language stringclasses 2
values | func_code_string stringlengths 63 466k |
|---|---|
python | def setup(self):
"""Setup filter (only called when filter is actually used)."""
super(RequireJSFilter, self).setup()
excluded_files = []
for bundle in self.excluded_bundles:
excluded_files.extend(
map(lambda f: os.path.splitext(f)[0],
bund... |
java | public void moveKBase(String oldQName, String newQName) {
Map<String, KieBaseModel> newMap = new HashMap<String, KieBaseModel>();
newMap.putAll( this.kBases );
KieBaseModel kieBaseModel = newMap.remove( oldQName );
newMap.put( newQName, kieBaseModel);
setKBases( newMap );
} |
python | def get_row_missing(xc, xd, cdiffs, index, cindices, dindices):
""" Calculate distance between index instance and all other instances. """
row = np.empty(0, dtype=np.double) # initialize empty row
cinst1 = xc[index] # continuous-valued features for index instance
dinst1 = xd[index] # discrete-val... |
java | protected void closeSocketAndStreams() {
LOG.trace("enter HttpConnection.closeSockedAndStreams()");
isOpen = false;
// no longer care about previous responses...
lastResponseInputStream = null;
if (null != outputStream) {
OutputStream temp = outputStream;
... |
java | public EEnum getMODCAInterchangeSetIStype() {
if (modcaInterchangeSetIStypeEEnum == null) {
modcaInterchangeSetIStypeEEnum = (EEnum)EPackage.Registry.INSTANCE.getEPackage(AfplibPackage.eNS_URI).getEClassifiers().get(97);
}
return modcaInterchangeSetIStypeEEnum;
} |
python | def rnaQuantificationsGenerator(self, request):
"""
Returns a generator over the (rnaQuantification, nextPageToken) pairs
defined by the specified request.
"""
if len(request.rna_quantification_set_id) < 1:
raise exceptions.BadRequestException(
"Rna Qu... |
python | def run_analysis(self, argv):
"""Run this analysis"""
args = self._parser.parse_args(argv)
exttype = splitext(args.infile)[-1]
if exttype in ['.fits', '.npy']:
castro_data = CastroData.create_from_sedfile(args.infile)
elif exttype in ['.yaml']:
castro_dat... |
java | public List<TimephasedCost> getTimephasedBaselineCost(int index)
{
return m_timephasedBaselineCost[index] == null ? null : m_timephasedBaselineCost[index].getData();
} |
java | public static byte[] toArray(Collection<? extends Number> bytes) {
byte[] array = new byte[bytes.size()];
Iterator<? extends Number> iter = bytes.iterator();
for (int i = 0; i < bytes.size(); i++) {
array[i] = iter.next().byteValue();
}
return array;
} |
python | def libvlc_video_set_callbacks(mp, lock, unlock, display, opaque):
'''Set callbacks and private data to render decoded video to a custom area
in memory.
Use L{libvlc_video_set_format}() or L{libvlc_video_set_format_callbacks}()
to configure the decoded format.
@param mp: the media player.
@param... |
java | public static Collection map(Mapper mapper, Iterator i, boolean includeNull) {
ArrayList l = new ArrayList();
while (i.hasNext()) {
Object o = mapper.map(i.next());
if (includeNull || o != null) {
l.add(o);
}
}
return l;
} |
java | public Result transfer(long count) {
if (count < 0L) throw new IllegalArgumentException("negative count");
return buffer == null ? transferNoBuffer(count) : transferBuffered(count);
} |
java | public void setRows(java.util.Collection<Row> rows) {
if (rows == null) {
this.rows = null;
return;
}
this.rows = new java.util.ArrayList<Row>(rows);
} |
python | def crude_age_standardization(e, b, n):
"""A utility function to compute rate through crude age standardization
Parameters
----------
e : array
(n*h, 1), event variable measured for each age group across n spatial units
b : array
(n*h, 1), populat... |
java | @XmlElementDecl(namespace = "http://docs.oasis-open.org/ns/cmis/messaging/200908/", name = "includeAllowableActions", scope = Query.class)
public JAXBElement<Boolean> createQueryIncludeAllowableActions(Boolean value) {
return new JAXBElement<Boolean>(
_GetObjectOfLatestVersionIncludeAllowableActions_QNAME,
... |
java | private HashSet<Point> hitMissHashSet( BinaryFast b, HashSet<Point> input, int[] kernel ) {
HashSet<Point> output = new HashSet<Point>();
Iterator<Point> it = input.iterator();
while( it.hasNext() ) {
Point p = it.next();
if (kernelMatch(p, b.getPixels(), b.getWidth(), b.... |
java | public static void invalidArgIf(boolean tester, String msg, Object... args) {
if (tester) {
throw invalidArg(msg, args);
}
} |
python | def cdf_single(z, N, normalization, dH=1, dK=3):
"""Cumulative distribution for the Lomb-Scargle periodogram
Compute the expected cumulative distribution of the periodogram
for the null hypothesis - i.e. data consisting of Gaussian noise.
Parameters
----------
z : array-like
the period... |
java | public void initializeExtensions() throws SQLException {
if (extensionsNeedInitialization) {
for (EmbeddedDbExtension ext : MdwServiceRegistry.getInstance().getEmbeddedDbExtensions()) {
logger.info("Initializing embedded db extension: " + ext);
List<String> sources = ... |
java | @XmlElementDecl(namespace = "http://www.opengis.net/gml", name = "TriangulatedSurface", substitutionHeadNamespace = "http://www.opengis.net/gml", substitutionHeadName = "Surface")
public JAXBElement<TriangulatedSurfaceType> createTriangulatedSurface(TriangulatedSurfaceType value) {
return new JAXBElement<Tr... |
python | def get_activity_zones(self, activity_id):
"""
Gets zones for activity.
Requires premium account.
http://strava.github.io/api/v3/activities/#zones
:param activity_id: The activity for which to zones.
:type activity_id: int
:return: An list of :class:`stravalib... |
python | def set_sdk_enabled(cls, value):
"""
Modifies the enabled flag if the "AWS_XRAY_SDK_ENABLED" environment variable is not set,
otherwise, set the enabled flag to be equal to the environment variable. If the
env variable is an invalid string boolean, it will default to true.
:para... |
java | @Override
public <DATA> InFileObjectPersister<DATA> createInFileObjectPersister(Class<DATA> clazz, File cacheFolder)
throws CacheCreationException {
return new JacksonObjectPersister<DATA>(getApplication(), clazz, cacheFolder);
} |
python | def delete_service(name, restart=True):
'''
Delete an existing service
CLI Example:
.. code-block:: bash
salt '*' firewalld.delete_service my_service
By default firewalld will be reloaded. However, to avoid reloading
you need to specify the restart as False
.. code-block:: bash
... |
java | protected void checkAutoscroll (MouseEvent exitEvent)
{
Component comp = exitEvent.getComponent();
Point p = exitEvent.getPoint();
try {
Point scr = comp.getLocationOnScreen();
p.translate(scr.x, scr.y);
} catch (IllegalComponentStateException icse) {
... |
java | public final void mELEMENTS() throws RecognitionException {
try {
int _type = ELEMENTS;
int _channel = DEFAULT_TOKEN_CHANNEL;
// hql.g:21:10: ( 'elements' )
// hql.g:21:12: 'elements'
{
match("elements"); if (state.failed) return;
}
state.type = _type;
state.channel = _channel;
}
fina... |
python | def from_bytes(cls, bitstream):
'''
Parse the given packet and update properties accordingly
'''
packet = cls()
# Convert to ConstBitStream (if not already provided)
if not isinstance(bitstream, ConstBitStream):
if isinstance(bitstream, Bits):
... |
java | public void truncateAllWithPrefix(@Nonnull String prefix) {
for (String queueName : queues.keySet()) {
if (queueName.startsWith(prefix)) {
truncate(queueName);
}
}
} |
python | def get(cls, domain, name):
"""
Get the requested site entry
@param domain: Domain name
@type domain: Domain
@param name: Site name
@type name: str
@rtype: Domain
"""
Site = cls
return Session.query(Site).filter(Site.domain == dom... |
python | def oftype(self, typ):
'''Return a generator of formatters codes of type typ'''
for key, val in self.items():
if val.type == typ:
yield key |
java | @Override
public boolean eIsSet(int featureID) {
switch (featureID) {
case XtextPackage.TYPE_REF__METAMODEL:
return metamodel != null;
case XtextPackage.TYPE_REF__CLASSIFIER:
return classifier != null;
}
return super.eIsSet(featureID);
} |
java | private boolean isCharVisible(int x, int y, StringWalker walker, ClipArea area)
{
if (area == null || area.noClip())
return true;
if (area.fullClip())
return false;
return area.isInside(x, y) || area.isInside(x + (int) Math.ceil(walker.width()), y + (int) Math.ceil(walker.height()));
} |
python | def num2varint(num):
"""
Converts a number to a variable length Int. Used for array length header
:param: {number} num - The number
:return: {string} hexstring of the variable Int.
"""
# if (typeof num !== 'number') throw new Error('VarInt must be numeric')
# if (num < 0) throw new RangeErr... |
java | @Override
public Class<?> getType(ELContext context, Object base, Object property) {
context.setPropertyResolved(false);
for (ELResolver resolver : resolvers) {
Class<?> type = resolver.getType(context, base, property);
if (context.isPropertyResolved()) {
return type;
}
}
return null;
} |
java | public void selfUnregister() {
LocalUnitsManager.unitMap(unitMap -> {
unitMap.forEach((groupName, unitListIgnored) -> {
try {
ServiceInstance<GroupProxy> serviceInstance = ZkServiceInstanceAdaptor.thisCuratorServiceInstance(groupName);
serviceD... |
python | def parallel(args):
"""
%prog parallel genome.fasta N
Partition the genome into parts and run separately. This is useful if MAKER
is to be run on the grid.
"""
from jcvi.formats.base import split
p = OptionParser(parallel.__doc__)
p.set_home("maker")
p.set_tmpdir(tmpdir="tmp")
... |
java | public void setRGLength(Integer newRGLength) {
Integer oldRGLength = rgLength;
rgLength = newRGLength;
if (eNotificationRequired())
eNotify(new ENotificationImpl(this, Notification.SET, AfplibPackage.MCF1__RG_LENGTH, oldRGLength, rgLength));
} |
java | public String merge (String newlyGenerated, String previouslyGenerated)
throws Exception
{
// Extract the generated section names from the output and make sure they're all matched
Map<String, Section> sections = Maps.newLinkedHashMap();
Matcher m = _sectionDelimiter.matcher(newlyGene... |
python | def _get_files_modified():
"""Get the list of modified files that are Python or Jinja2."""
cmd = "git diff-index --cached --name-only --diff-filter=ACMRTUXB HEAD"
_, files_modified, _ = run(cmd)
extensions = [re.escape(ext) for ext in list(SUPPORTED_FILES) + [".rst"]]
test = "(?:{0})$".format("|".j... |
java | public static org.restcomm.connect.provisioning.number.api.PhoneNumber convertIncomingPhoneNumbertoPhoneNumber(IncomingPhoneNumber incomingPhoneNumber) {
return new org.restcomm.connect.provisioning.number.api.PhoneNumber(
incomingPhoneNumber.getFriendlyName(),
incomingPhoneNumbe... |
python | def merge_likelihood_headers(filenames, outfile):
"""
Merge header information from likelihood files.
Parameters:
-----------
filenames : input filenames
oufile : the merged file to write
Returns:
--------
data : the data being written
"""
filenames = np.atleas... |
java | @Read()
public Patient read(@IdParam IdDt theId) {
Patient retVal = myPatients.get(theId.getIdPartAsLong());
if (retVal == null) {
throw new ResourceNotFoundException(theId);
}
return retVal;
} |
java | public <S, T> ToMarshaller<S,T> findMarshaller(ConverterKey<S,T> key) {
return BINDING.findMarshaller(key);
} |
java | public Parse parse(Parse tokens) {
Parse p = parse(tokens,1)[0];
setParents(p);
return p;
} |
python | def parse_type_system_definition(lexer: Lexer) -> TypeSystemDefinitionNode:
"""TypeSystemDefinition"""
# Many definitions begin with a description and require a lookahead.
keyword_token = lexer.lookahead() if peek_description(lexer) else lexer.token
func = _parse_type_system_definition_functions.get(cas... |
java | @SuppressWarnings("WeakerAccess")
public String getZone() {
LocationName location = Verify.verifyNotNull(LocationName.parse(stateProto.getLocation()));
//noinspection ConstantConditions
return location.getLocation();
} |
java | public static byte[] getIncreasingByteArray(int start, int len) {
byte[] ret = new byte[len];
for (int k = 0; k < len; k++) {
ret[k] = (byte) (k + start);
}
return ret;
} |
java | public CreateJobRequest withTags(java.util.Map<String, String> tags) {
setTags(tags);
return this;
} |
python | def in6_getnsmac(a): # return multicast Ethernet address associated with multicast v6 destination
"""
Return the multicast mac address associated with provided
IPv6 address. Passed address must be in network format.
"""
a = struct.unpack('16B', a)[-4:]
mac = '33:33:'
mac += (':'.join(map(l... |
python | def replace_group(self, index, func_grp, strategy, bond_order=1,
graph_dict=None, strategy_params=None, reorder=True,
extend_structure=True):
"""
Builds off of Molecule.substitute and MoleculeGraph.substitute_group
to replace a functional group in self... |
python | def concat(self, one, two):
"""Multiply two matrices and replace current one."""
if not len(one) == len(two) == 6:
raise ValueError("bad sequ. length")
self.a, self.b, self.c, self.d, self.e, self.f = TOOLS._concat_matrix(one, two)
return self |
java | public Set<LdapEntry> searchEntities(String name, String filter, Object[] filterArgs, int scope, List<String> inEntityTypes,
List<String> propNames, boolean getMbrshipAttr, boolean getMbrAttr, int countLimit, int timeLimit) throws WIMException {
String inEntityType = nul... |
python | def check_notification(self, code):
""" check a notification by its code """
response = self.get(url=self.config.NOTIFICATION_URL % code)
return PagSeguroNotificationResponse(response.content, self.config) |
python | def _get_project_types(self):
"""Get all available project types."""
project_types = get_available_project_types()
projects = []
for project in project_types:
projects.append(project.PROJECT_TYPE_NAME)
return projects |
java | @Override
protected Object buildResource(final ParameterItem<?> parameterItem, final ParameterParams parameterParams) {
Object object = null;
if (parameterParams instanceof ObjectParameter) {
final ObjectParameter<?> op = (ObjectParameter<?>) parameterParams;
// Load... |
java | private static String[] split(String value, String delimeter) {
StringTokenizer st = new StringTokenizer(value, delimeter);
String[] res = new String[st.countTokens()];
for (int i = 0; st.hasMoreTokens(); i++) {
res[i] = st.nextToken();
}
return res;
} |
python | def verify(self, signature):
"""Verifies a signature
:raises InvalidJWSSignature: if the verification fails.
"""
try:
payload = self._payload()
sigin = b'.'.join([self.protected.encode('utf-8'), payload])
self.engine.verify(self.key, sigin, signature)... |
python | def plot_stacked_hist(self, key="wall_time", nmax=5, ax=None, **kwargs):
"""
Plot stacked histogram of the different timers.
Args:
key: Keyword used to extract data from the timers. Only the first `nmax`
sections with largest value are show.
mmax: Maximum... |
python | def AddFXrefWrite(self, method, classobj, field):
"""
Add a Field Write to this class
:param method:
:param classobj:
:param field:
:return:
"""
if field not in self._fields:
self._fields[field] = FieldClassAnalysis(field)
self._fields... |
python | def to_dict(self, model_run):
"""Create a Json-like dictionary for a model run object. Extends the
basic object with run state, arguments, and optional prediction results
or error descriptions.
Parameters
----------
model_run : PredictionHandle
Returns
-... |
java | public static void histogram( GrayS16 input , int minValue , int histogram[] ) {
if( BoofConcurrency.USE_CONCURRENT ) {
ImplImageStatistics_MT.histogram(input,minValue,histogram);
} else {
ImplImageStatistics.histogram(input,minValue,histogram);
}
} |
python | def from_file(cls, fp, is_outlook=False):
"""
Init a new object from a file path.
Args:
fp (string): file path of raw email
is_outlook (boolean): if True is an Outlook email
Returns:
Instance of MailParser
"""
log.debug("Parsing email... |
python | def spawn_actors(self, monitor):
'''Spawn new actors if needed.
'''
to_spawn = monitor.cfg.workers - len(self.managed_actors)
if monitor.cfg.workers and to_spawn > 0:
for _ in range(to_spawn):
monitor.spawn() |
python | def resolve_attr(obj, name):
"""A custom attrgetter that operates both on dictionaries and objects"""
# TODO: setup some hinting, so we can go directly to the correct
# Maybe it's a dict ? Let's try dict lookup, it's the fastest
try:
return obj[name]
except TypeError:
pass
except... |
java | @RestrictTo(LIBRARY)
public void notifyUseCaseStart(UseCaseListener listener) {
try {
LOGGER.debug("Notifying " + getClass().getSimpleName() + " start to listener " + listener.getClass().getSimpleName());
listener.onStartUseCase();
} catch (Exception e) {
AbstractException abstractException = wrapExceptio... |
python | def create(self, environments):
"""
Method to create environments vip
:param environments vip: Dict containing environments vip desired
to be created on database
:return: None
"""
data = {'environments_vip': environments}
uri = '... |
python | def code(self):
"""Returns the code object for this BUILD file."""
return compile(self.source(), self.full_path, 'exec', flags=0, dont_inherit=True) |
java | @Override
public MergeDeveloperIdentitiesResult mergeDeveloperIdentities(MergeDeveloperIdentitiesRequest request) {
request = beforeClientExecution(request);
return executeMergeDeveloperIdentities(request);
} |
java | public long skip(long len) {
if (position + len > limit) len = limit - position;
if (len <= 0) return 0;
position += len;
return len;
} |
java | @Bean
@ConditionalOnMissingBean
@ConditionalOnClass(name = "org.springframework.web.reactive.function.client.WebClient")
public ReactiveCredHubOperations reactiveCredHubTemplate(
CredHubProperties credHubProperties, ClientOptions clientOptions,
@Autowired(required = false) ReactiveClientRegistrationRepository ... |
java | @Override
public void sawOpcode(int seen) {
FinallyBlockInfo fbi = fbInfo.get(0);
if (getPC() < fbi.startPC) {
return;
}
if (getPC() == fbi.startPC) {
if (OpcodeUtils.isAStore(seen)) {
fbi.exReg = RegisterUtils.getAStoreReg(this, seen);
... |
python | def getConId(self, contract_identifier):
""" Get contracts conId """
details = self.contractDetails(contract_identifier)
if len(details["contracts"]) > 1:
return details["m_underConId"]
return details["m_summary"]["m_conId"] |
java | public int getWidth ()
{
// Return the maximal width of our component mirages.
int width = 0;
for (Mirage m : _mirages) {
width = Math.max(width, m.getWidth());
}
return width;
} |
python | def print_dedicated_access(access):
"""Prints out the dedicated hosts a user can access"""
table = formatting.Table(['id', 'Name', 'Cpus', 'Memory', 'Disk', 'Created'], 'Dedicated Access')
for host in access:
host_id = host.get('id')
host_fqdn = host.get('name')
host_cpu = host.get(... |
python | def api_url(self):
'''return the api url of self'''
return pathjoin(Bin.path, self.name, url=self.service.url) |
python | def get_balance():
"""
Get the latest balance(s) for a single User.
Currently no search parameters are supported. All balances returned.
---
responses:
'200':
description: the User's balance(s)
schema:
items:
$ref: '#/definitions/Balance'
type: a... |
java | private void colorChooser2ndTextActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_colorChooser2ndTextActionPerformed
if (this.colorChooser2ndText.isLastOkPressed() && changeNotificationAllowed) {
this.controller.changed();
}
} |
java | private static boolean disableNestedLoopIndexJoinForInComparison (AbstractPlanNode root, AbstractParsedStmt parsedStmt) {
if (root.getPlanNodeType() == PlanNodeType.NESTLOOPINDEX) {
assert(parsedStmt != null);
return true;
}
return false;
} |
python | def log_connection_info(self):
"""
Overridden to customize the start-up message printed to the terminal
"""
_ctrl_c_lines = [
'NOTE: Ctrl-C does not work to exit from the command line.',
'To exit, just close the window, type "exit" or "quit" at the '
'... |
python | def get_default_connection():
"""Returns the default datastore connection.
Defaults endpoint to helper.get_project_endpoint_from_env() and
credentials to helper.get_credentials_from_env().
Use set_options to override defaults.
"""
tid = id(threading.current_thread())
conn = _conn_holder.get(tid)
if no... |
python | def list_calendars(self, limit=None, *, query=None, order_by=None):
""" Gets a list of calendars
To use query an order_by check the OData specification here:
http://docs.oasis-open.org/odata/odata/v4.0/errata03/os/complete/
part2-url-conventions/odata-v4.0-errata03-os-part2-url-conventi... |
java | public void addProgressChangeListener(MapboxNavigation navigation) {
this.navigation = navigation;
navigation.setCameraEngine(new DynamicCamera(mapboxMap));
navigation.addProgressChangeListener(progressChangeListener);
} |
python | def set(self, item: Union[Service, PublicKey]) -> 'DIDDoc':
"""
Add or replace service or public key; return current DIDDoc.
Raise BadDIDDocItem if input item is neither service nor public key.
:param item: service or public key to set
:return: current DIDDoc
"""
... |
python | def flattened(value, split=None):
"""
Args:
value: Possibly nested arguments (sequence of lists, nested lists)
split (int | str | unicode | (str | unicode, int) | None): How to split values:
- None: simply flatten, no further processing
- one char string: split() on speci... |
java | protected void setXaResourceFactory(ServiceReference<ResourceFactory> ref) {
if (tc.isEntryEnabled())
Tr.entry(tc, "setXaResourceFactory, ref " + ref);
_xaResourceFactoryReady = true;
if (ableToStartRecoveryNow()) {
// Can start recovery now
try {
... |
java | public EpollSocketChannelConfig setSoBusyPoll(int loopMicros) {
try {
((EpollSocketChannel) channel).socket.setSoBusyPoll(loopMicros);
return this;
} catch (IOException e) {
throw new ChannelException(e);
}
} |
java | public static PatchedBigQueryTableRowIterator fromTable(TableReference ref, Bigquery client) {
checkNotNull(ref, "ref");
checkNotNull(client, "client");
return new PatchedBigQueryTableRowIterator(ref, /* queryConfig */null, ref.getProjectId(), client);
} |
python | def clean():
"take out the trash"
src_dir = easy.options.setdefault("docs", {}).get('src_dir', None)
if src_dir is None:
src_dir = 'src' if easy.path('src').exists() else '.'
with easy.pushd(src_dir):
for pkg in set(easy.options.setup.packages) | set(("tests",)):
for filenam... |
java | @Override
public void delete(Object entity, Object pKey)
{
EntityMetadata metadata = KunderaMetadataManager.getEntityMetadata(kunderaMetadata, entity.getClass());
MetamodelImpl metaModel = (MetamodelImpl) kunderaMetadata.getApplicationMetadata().getMetamodel(
metadata.getPersiste... |
java | public GetReservationPurchaseRecommendationResult withRecommendations(ReservationPurchaseRecommendation... recommendations) {
if (this.recommendations == null) {
setRecommendations(new java.util.ArrayList<ReservationPurchaseRecommendation>(recommendations.length));
}
for (Reservation... |
python | def reissue(csr_file,
certificate_id,
web_server_type,
approver_email=None,
http_dc_validation=False,
**kwargs):
'''
Reissues a purchased SSL certificate. Returns a dictionary of result
values.
csr_file
Path to Certificate Signing Requ... |
python | def add_version_iri(graph, epoch):
""" Also remove the previous versionIRI if there was one."""
for ont in graph.subjects(rdf.type, owl.Ontology):
for versionIRI in graph.objects(ont, owl.versionIRI):
graph.remove((ont, owl.versionIRI, versionIRI))
t = ont, owl.versionIRI, make_versi... |
java | public static boolean primitiveIsAssignableFrom (Class<?> lhs, Class<?> rhs)
{
if (lhs == null || rhs == null) {
return false;
}
if (!(lhs.isPrimitive() && rhs.isPrimitive())) {
return false;
}
if (lhs.equals(rhs)) {
return true;
}
... |
java | @SuppressWarnings({ "unchecked", "rawtypes" })
public Serializable parseIdString(String id) {
Class idType = getIdField().getType();
return parser.parse(id, idType);
} |
python | def kmeans_pp(data, k, centers=None):
"""
Generates kmeans++ initial centers.
Args:
data (array): A 2d array- genes x cells
k (int): Number of clusters
centers (array, optional): if provided, these are one or more known cluster centers. 2d array of genes x number of centers (<=k).
... |
python | def remove_child_gradebook(self, gradebook_id, child_id):
"""Removes a child from a gradebook.
arg: gradebook_id (osid.id.Id): the ``Id`` of a gradebook
arg: child_id (osid.id.Id): the ``Id`` of the new child
raise: NotFound - ``gradebook_id`` not a parent of ``child_id``
... |
java | private IDataSet performReplacements(IDataSet dataSet, List<Replacer> replacersList) {
if (replacersList == null || replacersList.isEmpty())
return dataSet;
ReplacementDataSet replacementSet = new ReplacementDataSet(dataSet);
// convert to set to remove duplicates
Set<Repla... |
python | def cutadapt_length_trimmed_plot (self):
""" Generate the trimming length plot """
description = 'This plot shows the number of reads with certain lengths of adapter trimmed. \n\
Obs/Exp shows the raw counts divided by the number expected due to sequencing errors. A defined peak \n\
may... |
java | public Observable<VirtualNetworkGatewayInner> resetAsync(String resourceGroupName, String virtualNetworkGatewayName) {
return resetWithServiceResponseAsync(resourceGroupName, virtualNetworkGatewayName).map(new Func1<ServiceResponse<VirtualNetworkGatewayInner>, VirtualNetworkGatewayInner>() {
@Overri... |
python | def _setup_output_file(self, output_filename, args, write_header=True):
"""Open and prepare output file."""
# write command line into outputFile
# (without environment variables, they are documented by benchexec)
try:
output_file = open(output_filename, 'w') # override existi... |
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