language
stringclasses
2 values
func_code_string
stringlengths
63
466k
java
private static boolean encodeFileToFile(String infile, String outfile) { boolean success = false; java.io.InputStream in = null; java.io.OutputStream out = null; try { in = new Base64.InputStream(new java.io.BufferedInputStream(new java.io.FileInputStream(infile)), Base64.ENCODE); out = new java.io.Buf...
java
private boolean methodThrowsException(Method method, Class<? extends Exception> exceptionType) { // Check whether the method throws an exception of the specified type for (Class<?> thrownType : method.getExceptionTypes()) { if (exceptionType.isAssignableFrom(thrownType)) ...
java
public static <T, U> DictionaryFeatureVectorGenerator<T, U> createFromData(Collection<T> data, FeatureGenerator<T, U> generator, boolean ignoreOovFeatures) { IndexedList<U> features = new IndexedList<U>(); for (T datum : data) { features.addAll(generator.generateFeatures(datum).keySet()); } ...
python
def disarm(self, wait=True, timeout=None): '''Disarm the vehicle. If wait is True, wait for disarm operation to complete before returning. If timeout is nonzero, raise a TimeouTerror if the vehicle has not disarmed after timeout seconds. ''' self.armed = False ...
python
def packages(self, name=None, memory=None, disk=None, swap=None, version=None, vcpus=None, group=None): """ :: GET /:login/packages :param name: the label associated with the resource package :type name: :py:class:`basestring` ...
java
public void warnv(Throwable t, String format, Object... params) { doLog(Level.WARN, FQCN, format, params, t); }
java
public void defineApplication(ApplicationDefinition appDef) { checkServiceState(); Tenant tenant = TenantService.instance().getDefaultTenant(); defineApplication(tenant, appDef); }
python
def string_to_file(path, input): """ Write a file from a given string. """ mkdir_p(os.path.dirname(path)) with codecs.open(path, "w+", "UTF-8") as file: file.write(input)
python
def local_assortativity_wu_sign(W): ''' Local assortativity measures the extent to which nodes are connected to nodes of similar strength. Adapted from Thedchanamoorthy et al. 2014 formula to allowed weighted/signed networks. Parameters ---------- W : NxN np.ndarray undirected conne...
java
@Override public UpdateUserPhoneConfigResult updateUserPhoneConfig(UpdateUserPhoneConfigRequest request) { request = beforeClientExecution(request); return executeUpdateUserPhoneConfig(request); }
python
def get_val(self): """ Gets attribute's value. @return: stored value. @rtype: int @raise IOError: if corresponding file in /proc/sys cannot be read. """ with open(os.path.join(self._base, self._attr), 'r') as file_obj: return int(file_obj.readline())
python
def from_socket(controller, host=None, port=None, track_path=None, log_level=logging.ERROR): """Create rocket instance using socket connector""" rocket = Rocket(controller, track_path=track_path, log_level=log_level) rocket.connector = SocketConnector(controller=controller, ...
python
def as_dict(self): """Return a dictionary containing this `Fact` data.""" return {k: unfreeze(v) for k, v in self.items() if not self.is_special(k)}
java
public int getParentExpressionIndex(int index) { if (index == 0) { return -1; } else { int[] parts = findSubexpression(index); int parentIndex = subexpressions.get(parts[0]).getParentExpressionIndex(parts[1]); if (parentIndex == -1) { // index refers to a child of this exp...
python
def is_set(self, key): """Return True if variable is a set""" data = self.model.get_data() return isinstance(data[key], set)
python
def _match(self): """Find all matches and generate a position group for each match.""" #disable optimized matching optimized_rows = None optimized_columns = None for match in self.__match_rows(optimized_rows): #match in rows yield match for match i...
python
def weld_cast_scalar(scalar, to_weld_type): """Returns the scalar casted to the request Weld type. Parameters ---------- scalar : {int, float, WeldObject} Input array. to_weld_type : WeldType Type of each element in the input array. Returns ------- WeldObject Re...
python
def watch(): """Renerate documentation when it changes.""" # Start with a clean build sphinx_build['-b', 'html', '-E', 'docs', 'docs/_build/html'] & FG handler = ShellCommandTrick( shell_command='sphinx-build -b html docs docs/_build/html', patterns=['*.rst', '*.py'], ignore_pa...
python
def end(self, s=None, post=None, noraise=False): """ Prints the end banner and raises ``ProgressOK`` exception When ``noraise`` flag is set to ``True``, then the exception is not raised, and progress is allowed to continue. If ``post`` function is supplied it is invoked with no argumen...
java
public String makeCaptureQueryUrl(String url) { WaybackRequest newWBR = wbRequest.clone(); newWBR.setCaptureQueryRequest(); newWBR.setRequestUrl(url); return newWBR.getAccessPoint().getQueryPrefix() + "query?" + newWBR.getQueryArguments(1); }
python
def insert(self, index, value): '''Insert a node in-place. It is highly suggested that you do not use this method. Use assoc instead''' newnode = LookupTreeNode(index, value) level = 0 node = self.root while True: ind = _getbits(newnode.index, level) ...
python
def nano_sub(bind, tables): """Nanomsg fanout sub. (Experimental) This sub will use nanomsg to fanout the events. :param bind: the zmq pub socket or zmq device socket. :param tables: the events of tables to follow. """ logger = logging.getLogger("meepo.sub.nano_sub") from nanomsg import S...
java
public double f(double[] x) { double max = Double.NEGATIVE_INFINITY; Benchmark.Ax(m_z, m_A, x); for (int i = 0; i < mDimension; i++) { double temp = Math.abs(m_z[i] - m_B[i]); if (max < temp) { max = temp; } } return (max + mBias); }
java
public String getUri() { String uri = m_context.addSiteRoot(m_context.getUri()); if (m_detailViewId != null) { uri += m_detailViewId.toString() + "/"; } return uri; }
java
public void store(DataSink sink) { try { localControlChannel.resetReplyCount(); if (session.transferMode != GridFTPSession.MODE_EBLOCK) { // // no EBLOCK // EBlockParallelTransferContext context = (EBlo...
python
def _write_tree(self, tree: dict, output: Union[str, BinaryIO], file_mode: int=0o666) -> None: """ Write the model to disk. :param tree: The data dict - will be the ASDF tree. :param output: The output file path or a file object. :param file_mode: The output file's permissions. ...
python
def delete_repository_method(namespace, name, snapshot_id): """Redacts a method and all of its associated configurations. The method should exist in the methods repository. Args: namespace (str): Methods namespace method (str): method name snapshot_id (int): snapshot_id of the meth...
python
def draw_additive_plot(data, figsize, show, text_rotation=0): """Draw additive plot.""" # Turn off interactive plot if show == False: plt.ioff() # Format data neg_features, total_neg, pos_features, total_pos = format_data(data) # Compute overall metrics base_value = data['b...
java
public void replaceMenuById(SubMenuItem subMenu, MenuItem toReplace) { synchronized (subMenuItems) { ArrayList<MenuItem> list = subMenuItems.get(subMenu); int idx = -1; for (int i = 0; i < list.size(); ++i) { if (list.get(i).getId() == toReplace.getId()) { ...
python
def GlobalAvgPooling(x, data_format='channels_last'): """ Global average pooling as in the paper `Network In Network <http://arxiv.org/abs/1312.4400>`_. Args: x (tf.Tensor): a 4D tensor. Returns: tf.Tensor: a NC tensor named ``output``. """ assert x.shape.ndims == 4 dat...
python
def reload(self, config=None, debug=False): """ load/reload configuration @dict: configuration of ldapcherry """ try: # log configuration handling # get log level # (if not in configuration file, log level is set to debug) level = get_logle...
python
def change(self, inpt, hashfun=DEFAULT_HASHFUN): """Change the avatar by providing a new input. Uses the standard hash function if no one is given.""" self.img = self.__create_image(inpt, hashfun)
python
def updateEvolution(self): ''' Updates the "population punk proportion" evolution array. Fasion victims believe that the proportion of punks in the subsequent period is a linear function of the proportion of punks this period, subject to a uniform shock. Given attributes of sel...
java
public static boolean matchMobile(String str) { if (StringUtils.isEmpty(str)) return false; return Pattern.matches(REG_MOBILE, str.trim()); }
java
public static String printSymbol(SymbolToken token){ return String.format("{$%s:%s}", token.getText(), token.getSid()); }
python
def clone(self, data=None, shared_data=True, new_type=None, link=True, *args, **overrides): """Clones the object, overriding data and parameters. Args: data: New data replacing the existing data shared_data (bool, optional): Whether to use existing data ...
python
def GetFormatsWithSignatures(cls, parser_filter_expression=None): """Retrieves the format specifications that have signatures. This method will create a specification store for parsers that define a format specification with signatures and a list of parser names for those that do not. Args: ...
python
def get_priority(self) -> int: """ Rerturns the priority of the file from 1 (pre) to 3 (post) :return: the priority """ dtype = self.get_type() if dtype & DeltaType.PRE: return 1 elif dtype & DeltaType.POST: return 3 else: ...
java
public void initialize(final int appId, ICallStatsTokenGenerator tokenGenerator, final String bridgeId, final ServerInfo serverInfo, final CallStatsInitListener callStatsInitListener) { if (appId <= 0 || StringUtils.isBlank(bridgeId) || serverInfo == null || callStatsInitListener == null) { ...
python
def validate_settings(settings): """Ensure all user-supplied settings exist, or throw a useful error message. :param obj settings: The Django settings object. """ if not (settings.STORMPATH_ID and settings.STORMPATH_SECRET): raise ImproperlyConfigured('Both STORMPATH_ID and STORMPATH_SECRET mus...
java
public final static void itos(long i, int index, char[] buf) { if (i == Long.MIN_VALUE) { // -9223372036854775808 buf[--index] = '8'; buf[--index] = '0'; buf[--index] = '8'; buf[--index] = '5'; buf[--index] = '7'; buf[--index] = '7'; buf[--index] = '4'; buf[--index] = '5'; buf[--index] =...
python
def l1_log_loss(event_times, predicted_event_times, event_observed=None): r""" Calculates the l1 log-loss of predicted event times to true event times for *non-censored* individuals only. .. math:: 1/N \sum_{i} |log(t_i) - log(q_i)| Parameters ---------- event_times: a (n,) array of obs...
python
def write(self, f): """ Write an SBOL file from current document contents """ rdf = ET.Element(NS('rdf', 'RDF'), nsmap=XML_NS) # TODO: TopLevel Annotations sequence_values = sorted(self._sequences.values(), key=lambda x: x.identity) self._add_to_root(rdf, sequenc...
python
def set_target_temp(self, temperature): """ Sets the target temperature, to the requested int """ if 35 < temperature < 5: logging.info("Refusing to set temp outside of allowed range") return False else: self._hm_send_address(self.addre...
java
private Collection<FileStatus> toFileStatusesWithImplicitDirectories( Collection<FileInfo> fileInfos) throws IOException { List<FileStatus> fileStatuses = new ArrayList<>(fileInfos.size()); Set<URI> filePaths = Sets.newHashSetWithExpectedSize(fileInfos.size()); String userName = getUgiUserName(); ...
python
def main(): ''' main program loop ''' conn = symphony.Config('/etc/es-bot/es-bot.cfg') # connect to pod try: agent, pod, symphony_sid = conn.connect() print ('connected: %s' % (symphony_sid)) except Exception as err: print ('failed to connect!: %s' % (err)) # main loop ...
python
def getFoundIns(self, projectarea_id=None, projectarea_name=None, archived=False): """Get all :class:`rtcclient.models.FoundIn` objects by project area id or name If both `projectarea_id` and `projectarea_name` are `None`, all the foundins in all project areas will b...
python
def batch(samples): """CWL: batch together per sample, joint and germline calls for ensemble combination. Sets up groups of same sample/batch variant calls for ensemble calling, as long as we have more than one caller per group. """ samples = [utils.to_single_data(x) for x in samples] sample_or...
python
def weekday_series(self, start, end, weekday, return_date=False): """Generate a datetime series with same weekday number. ISO weekday number: Mon to Sun = 1 to 7 Usage:: >>> start, end = "2014-01-01 06:30:25", "2014-02-01 06:30:25" >>> rolex.weekday_series(start, end, ...
python
def plot_monthly_ic_heatmap(mean_monthly_ic, ax=None): """ Plots a heatmap of the information coefficient or returns by month. Parameters ---------- mean_monthly_ic : pd.DataFrame The mean monthly IC for N periods forward. Returns ------- ax : matplotlib.Axes The axes t...
python
def get_font_options(self): """Copies the scaled font’s options. :returns: A new :class:`FontOptions` object. """ font_options = FontOptions() cairo.cairo_scaled_font_get_font_options( self._pointer, font_options._pointer) return font_options
python
def do_POST(self): """ This method will be called for each POST request to one of the listener ports. It parses the CIM-XML export message and delivers the contained CIM indication to the stored listener object. """ # Accept header check described in DSP0200 ...
java
public static <T> AsyncHandler<Response<ByteString>> autoSerialize(AsyncHandler<T> inner) { return serialize(new AutoSerializer()).apply(inner); }
python
def _snort_cmd(self, pcap): """ Given a pcap filename, get the commandline to run. :param pcap: Pcap filename to scan :returns: list of snort command args to scan supplied pcap file """ cmdline = "'{0}' -A console -N -y -c '{1}' {2} -r '{3}'" \ .format(self.c...
python
def filter_on_wire_representation(ava, acs, required=None, optional=None): """ :param ava: A dictionary with attributes and values :param acs: List of tuples (Attribute Converter name, Attribute Converter instance) :param required: A list of saml.Attributes :param optional: A list of saml.At...
java
public void setWorkingDirectory(Path dir) throws IOException { ensureState(JobState.DEFINE); conf.setWorkingDirectory(dir); }
python
def thaw_args(subparsers): """Add command line options for the thaw operation""" thaw_parser = subparsers.add_parser('thaw') thaw_parser.add_argument('--gpg-password-path', dest='gpg_pass_path', help='Vault path of GPG passphrase location') thaw_...
python
def _set_time(self, m): '''set time for a message''' # really just left here for profiling m._timestamp = self.timestamp if len(m._fieldnames) > 0 and self.clock is not None: self.clock.set_message_timestamp(m)
python
def go_in(self, vertex): """ Tell the edge to go into this vertex. Args: vertex (Vertex): vertex to go into. """ if self.vertex_in: self.vertex_in.edges_in.remove(self) self.vertex_in = vertex vertex.edges_in.add(self)
python
def execute(self, query, vars=None, result=False): """.. :py:method:: :param bool result: whether query return result :rtype: bool .. note:: True for `select`, False for `insert` and `update` """ with self.connection() as cur: if self.debug: ...
java
Mono<Void> delayAsync() { Mono<Void> result = Mono.empty(); if (delayInMilliseconds > 0) { result = result.delaySubscription(Duration.ofMillis(delayInMilliseconds)); } return result; }
java
public static <T extends File> T createFile(final SecurityContext securityContext, final InputStream fileStream, final String contentType, final Class<T> fileType, final String name, final Folder parentFolder) throws FrameworkException, IOException { final PropertyMap props = new PropertyMap(); props.put(Struct...
python
def query(self, xri, service_types): """Resolve some services for an XRI. Note: I don't implement any service endpoint selection beyond what the resolver I'm querying does, so the Services I return may well include Services that were not of the types you asked for. May raise fe...
python
def set_root_prefix(self, prefix=None): """ Set the prefix to the root environment (default is /opt/anaconda). This function should only be called once (right after importing conda_api). """ if prefix: self.ROOT_PREFIX = prefix else: # Fin...
python
def _load_from_string(data): '''Loads the cache from the string''' global _CACHE if PYTHON_3: data = json.loads(data.decode("utf-8")) else: data = json.loads(data) _CACHE = _recursively_convert_unicode_to_str(data)['data']
python
def build(algo, init): '''Build and return an optimizer for the rosenbrock function. In downhill, an optimizer can be constructed using the build() top-level function. This function requires several Theano quantities such as the loss being optimized and the parameters to update during optimization. ...
python
def trim(hdu): """TRIM a CFHT MEGAPRIME frame using the DATASEC keyword""" datasec = re.findall(r'(\d+)', hdu.header.get('DATASEC')) l=int(datasec[0])-1 r=int(datasec[1]) b=int(datasec[2])-1 t=int(datasec[3]) if opt.verbose: print "Trimming [%d:%d,%d:%d]" % ...
python
def call(self, transaction=None, block_identifier='latest'): """ Execute a contract function call using the `eth_call` interface. This method prepares a ``Caller`` object that exposes the contract functions and public variables as callable Python functions. Reading a public ``o...
java
private Result doDecode(BinaryBitmap image, Map<DecodeHintType,?> hints) throws NotFoundException { int width = image.getWidth(); int height = image.getHeight(); BitArray row = new BitArray(width); boolean tryHarder = hints != null && hints.containsKey(DecodeHintType.TRY_HARDE...
python
def _phiTilde(self, r, N,L): """ NAME: _phiTilde PURPOSE: Evaluate phi_tilde as defined in equation 3.10 and 2.25 for 0 <= n < N and 0 <= l < L INPUT: r - Evaluate at radius r N - size of the N dimension L - size of the L dimension ...
java
public Optional<Nengo> findNext() { if (this.court == COURT_NORTHERN) { if (this.index == NORTHERN_NENGOS.length - 1) { return Optional.of(NENGO_OEI); } else { return Optional.of(NORTHERN_NENGOS[this.index + 1]); } } else if (this.inde...
python
def eval_hooks(self): """ Evaluate the current state of this Source and invoke any attached hooks if they've been triggered """ logging.debug("Evaluating hooks") if self.get_edge_triggered(): logging.debug("Hook triggered") for hook in [h for h in ...
java
public void waitUntilReady() throws InterruptedException, CouldNotPerformException { try { while (true) { try { waitUntilReadyFuture().get((JPService.testMode() ? 4 : 300), TimeUnit.SECONDS); break; } catch (final TimeoutExcepti...
java
public boolean isLocal() { if (TraceComponent.isAnyTracingEnabled() && tc.isEntryEnabled()) SibTr.entry(tc, "isLocal"); boolean isLocal = false; if (foreignDest.getResolvedDestinationHandler().getLocalLocalizationPoint() != null) isLocal = true; if (TraceComponent.isAnyTracing...
python
def _notify_breakpoint(self, event): """ Notify breakpoints of a breakpoint exception event. @type event: L{ExceptionEvent} @param event: Breakpoint exception event. @rtype: bool @return: C{True} to call the user-defined handle, C{False} otherwise. """ ...
python
def add_base_type_dynamically(error_type, additional_type): """ Utility method to create a new type dynamically, inheriting from both error_type (first) and additional_type (second). The class representation (repr(cls)) of the resulting class reflects this by displaying both names (fully qualified for t...
python
def request(self, verb, path, **params): ''' A helper function for making generic POST requests calls. It is used by every namespaced API method. It can be used to make any generic API call that is automatically authenticated using your API credentials: .. code-block:: python ...
python
def load_sqlite(self, db, query=None, table=None, cls=None, column_map=None): """Load data from sqlite db and return as list of specified objects.""" if column_map is None: column_map = {} db_path = self.profile_path(db, must_exist=True) def obj_factory(c...
java
@Override public Node getParentNode(String parentNodeId) { NodeLink link = new NodeLink(parentNodeId, getNodeId()); if (this.parents == null) { return null; } else { return this.parents.get(link); } }
python
def upload(df, gfile="/New Spreadsheet", wks_name=None, col_names=True, row_names=True, clean=True, credentials=None, start_cell = 'A1', df_size = False, new_sheet_dimensions = (1000,100)): ''' Upload given Pandas DataFrame to Google Drive and returns gspread Worksheet object ...
python
def check_multi_output_plate_compatibility(source_plates, sink_plate): """ Check multi-output plate compatibility. This ensures that the source plates and sink plates match for a multi- output plate :param source_plates: The source plates :param sink_plate: The sink plate ...
java
public File getFileUnchecked(String fileName) { validatePathname(fileName); return new File(storageDir + separator + fileName); }
java
protected <T> RegistrationAnnotatedBindingBuilder<T> register(Class<T> type) { return registryBinderImpl.register(type); }
java
private void writeNotes(int recordNumber, String text) throws IOException { m_buffer.setLength(0); m_buffer.append(recordNumber); m_buffer.append(m_delimiter); if (text != null) { String note = stripLineBreaks(text, MPXConstants.EOL_PLACEHOLDER_STRING); boolean quote...
python
def init_app(self, app, sessionstore=None, register_blueprint=True): """Flask application initialization. :param app: The Flask application. :param sessionstore: store for sessions. Passed to ``flask-kvsession``. If ``None`` then Redis is configured. (Default: ``None``) ...
java
@Override public List<String> getSSODomainList() { WebAppSecurityConfig globalConfig = WebAppSecurityCollaboratorImpl.getGlobalWebAppSecurityConfig(); if (globalConfig != null) return WebAppSecurityCollaboratorImpl.getGlobalWebAppSecurityConfig().getSSODomainList(); else ...
java
public ServiceFuture<SummarizeResultsInner> summarizeForResourceGroupLevelPolicyAssignmentAsync(String subscriptionId, String resourceGroupName, String policyAssignmentName, final ServiceCallback<SummarizeResultsInner> serviceCallback) { return ServiceFuture.fromResponse(summarizeForResourceGroupLevelPolicyAssi...
java
private boolean findLongestMatch(final char[] revA, final ArrayList<Integer> list, final char[] revB, final int index) { int match; longestMatch_size = -1; int size = list.size(); int revAsize = revA.length; int revBsize = revB.length; int start, end, count; for (int i = 0; i < size; i++) { sta...
java
public int addFunction(FunctionNode fnNode) { if (fnNode == null) codeBug(); if (functions == null) functions = new ArrayList<FunctionNode>(); functions.add(fnNode); return functions.size() - 1; }
python
def setType(self, polygonID, polygonType): """setType(string, string) -> None Sets the (abstract) type of the polygon. """ self._connection._beginMessage( tc.CMD_SET_POLYGON_VARIABLE, tc.VAR_TYPE, polygonID, 1 + 4 + len(polygonType)) self._connection._packString(poly...
java
public static String tooltip(Field field) { final String tooltip = field.getTooltip(); if (tooltip == null) { return ""; } return "<img class='tooltip' title='" + tooltip + "' alt='?' src='" + getContextPath() + "/templates/" + getTemplate() + ...
python
def get_response_structure(name): """ Returns the response structure for a know list of create context responses. :param name: The constant value above :return: The response structure or None if unknown """ return { CreateContextName.SMB2_CREATE_DURAB...
python
def merge_metadata(preprocess_output_dir, transforms_file): """Merge schema, analysis, and transforms files into one python object. Args: preprocess_output_dir: the output folder of preprocessing. Should contain the schema, and the numerical and categorical analysis files. transforms_file: ...
java
private void storeKey(SecretKey key) { final String keyStoreFile = getMain().getFileSystemManager().getSystemLocation() + File.separator + "izou.keystore"; KeyStore keyStore = createKeyStore(keyStoreFile, "4b[X:+H4CS&avY<)"); try { KeyStore.SecretKeyEntry keyStoreEntry = new KeyStor...
java
void removeComputer(final Computer computer) { Queue.withLock(new Runnable() { @Override public void run() { Map<Node,Computer> computers = getComputerMap(); for (Map.Entry<Node, Computer> e : computers.entrySet()) { if (e.getValue() ==...
python
def Run(self, arg): """Does the actual work.""" try: if self.grr_worker.client.FleetspeakEnabled(): raise ValueError("Not supported on Fleetspeak enabled clients.") except AttributeError: pass smart_arg = {str(field): value for field, value in iteritems(arg)} disallowed_fields ...
python
def _get_tokens(self, authn_response, context): """ :param authn_response: authentication response from OP :type authn_response: oic.oic.message.AuthorizationResponse :return: access token and ID Token claims :rtype: Tuple[Optional[str], Optional[Mapping[str, str]]] """ ...
python
def check_xups_env_ambient_temp(the_session, the_helper, the_snmp_value, the_unit=1): """ OID .1.3.6.1.4.1.534.1.6.1.0 MIB Excerpt The reading of the ambient temperature in the vicinity of the UPS or SNMP agent. """ the_helper.add_metric( label=the_helper.options.type, ...
java
public void readData(InputStream inputStream) throws IOException { if (inputStream == null) { return; } data = ParserUtils.parseBinary(inputStream, (int) size.getValue()); }
java
@SuppressWarnings("unchecked") public static <E, D extends Dataset<E>> D update( URI uri, DatasetDescriptor descriptor, Class<E> type) { Preconditions.checkArgument( URIBuilder.DATASET_SCHEME.equals(uri.getScheme()), "Not a dataset or view URI: " + uri); Preconditions.checkNotNull(type, ...