language stringclasses 2
values | func_code_string stringlengths 63 466k |
|---|---|
java | protected void fireLayerRemovedEvent(MapLayer layer, int oldChildIndex) {
fireLayerHierarchyChangedEvent(new MapLayerHierarchyEvent(
this, layer, Type.REMOVE_CHILD, oldChildIndex, layer.isTemporaryLayer()));
} |
python | def event_at(self, when, data_tuple):
"""
Schedule an event to be emitted at a certain time.
:param when: an absolute timestamp
:param data_tuple: a 2-tuple (flavor, data)
:return: an event object, useful for cancelling.
"""
return self._base.event_at(when, self.... |
python | def fetch_attr_type(self, table_name):
"""
:return:
Dictionary of attribute names and attribute types in the table.
:rtype: dict
:raises simplesqlite.NullDatabaseConnectionError:
|raises_check_connection|
:raises simplesqlite.TableNotFoundError:
... |
python | def validate(request_schema=None, response_schema=None):
"""
Decorate request handler to make it automagically validate it's request
and response.
"""
def wrapper(func):
# Validating the schemas itself.
# Die with exception if they aren't valid
if request_schema is not None:
... |
python | def differences(scansion: str, candidate: str) -> List[int]:
"""
Given two strings, return a list of index positions where the contents differ.
:param scansion:
:param candidate:
:return:
>>> differences("abc", "abz")
[2]
"""
before = scansion.replace(" ", "")
after = candidate... |
java | public boolean syncClonedListener(BaseField field, FieldListener listener, boolean bInitCalled)
{
if (!bInitCalled)
((DateUpdatedHandler)listener).init(null, m_iMainFilesFieldSeq, m_bMoveCurrentTime);
return super.syncClonedListener(field, listener, true);
} |
java | private static long[] checkStringIndex(String term) {
assert (term != null);
// If second element is < 0, this is a dict key
long[] result = {0L, 1L};
// Empty strings are not allowed.
if ("".equals(term)) { //$NON-NLS-1$
throw EvaluationException.create(MSG_KEY_CANNOT_BE_EMPTY_STRING);
}
if ... |
python | def update(self, device_json=None, info_json=None, settings_json=None,
avatar_json=None):
"""Update the internal device json data."""
if device_json:
UTILS.update(self._device_json, device_json)
if avatar_json:
UTILS.update(self._avatar_json, avatar_json)
... |
python | def update_attribute(attr,**kwargs):
"""
Add a generic attribute, which can then be used in creating
a resource attribute, and put into a type.
.. code-block:: python
(Attr){
id = 1020
name = "Test Attr"
dimension_id = 123
}
"""
log.debug("... |
python | def stopping_function(results, args=None, rstate=None, M=None,
return_vals=False):
"""
The default stopping function utilized by :class:`DynamicSampler`.
Zipped parameters are passed to the function via :data:`args`.
Assigns the run a stopping value based on a weighted average of t... |
python | def _construct_key(self, rule_id: str, spacy_rule_id:int) -> int:
"""
Use a mapping to store the information about rule_id for each matches, create the mapping key here
Args:
rule_id: str
spacy_rule_id:int
Returns: int
"""
hash_key = (rule_id, sp... |
python | def compact_tables(self):
"""
Compact report items of type "table" with same results type. Report items of type "tables" in the
same subreport is merged into one. The data are ordered by 1st column.
"""
items_to_del = set()
for i in range(len(self.report_data)):
... |
python | def set_debug_listener(stream):
"""Break into a debugger if receives the SIGUSR1 signal"""
def debugger(sig, frame):
launch_debugger(frame, stream)
if hasattr(signal, 'SIGUSR1'):
signal.signal(signal.SIGUSR1, debugger)
else:
logger.warn("Cannot set SIGUSR1 signal for debug mode... |
java | public Config find(String morphlineId, Config config, String nameForErrorMsg) {
List<? extends Config> morphlineConfigs = config.getConfigList("morphlines");
if (morphlineConfigs.size() == 0) {
throw new MorphlineCompilationException(
"Morphline file must contain at least one morphline: " + name... |
java | public static void asJson(Writer writer, WxOutMsg msg) {
NutMap map = new NutMap();
map.put("touser", msg.getToUserName());
map.put("msgtype", msg.getMsgType());
switch (WxMsgType.valueOf(msg.getMsgType())) {
case text:
map.put("text", new NutMap().setv("content", msg... |
python | def _astype(self, dtype, **kwargs):
"""
these automatically copy, so copy=True has no effect
raise on an except if raise == True
"""
dtype = pandas_dtype(dtype)
# if we are passed a datetime64[ns, tz]
if is_datetime64tz_dtype(dtype):
values = self.val... |
python | def CMS(data, format="PEM"):
"""
Factory function to create CMS objects from received messages.
Parses CMS data and returns either SignedData or EnvelopedData
object. format argument can be either "PEM" or "DER".
It determines object type from the contents of received CMS
structure.
""... |
java | public static double Inverse(double y0) {
if (y0 <= 0.0) {
if (y0 == 0) return Double.NEGATIVE_INFINITY;
try {
throw new IllegalArgumentException("y0");
} catch (Exception e) {
e.printStackTrace();
}
}
if (y0 >= 1.0)... |
python | def do_GET(self): # pylint: disable=g-bad-name
"""Serve the server pem with GET requests."""
self._IncrementActiveCount()
try:
if self.path.startswith("/server.pem"):
stats_collector_instance.Get().IncrementCounter(
"frontend_http_requests", fields=["cert", "http"])
self.S... |
java | public static String rowIndexListToString(final List<Integer> row) {
if (row == null || row.isEmpty()) {
return null;
}
StringBuffer index = new StringBuffer();
boolean addDelimiter = false;
for (Integer lvl : row) {
if (addDelimiter) {
index.append(INDEX_DELIMITER);
}
index.append(lvl);
... |
python | def _ensure_url_string(url):
"""Convert `url` to a string URL if it isn't one already."""
if isinstance(url, str):
return url
elif isinstance(url, (ParseResult, SplitResult)):
return url.geturl()
else:
raise TypeError(
"Could not convert %r to a string URL." % (url,)) |
java | @SuppressFBWarnings(value = "IM_BAD_CHECK_FOR_ODD", justification = "It's obvious that groupSize is not negative.")
public CPSubsystemConfig setGroupSize(int groupSize) {
checkTrue(groupSize == 0 || (groupSize >= MIN_GROUP_SIZE && groupSize <= MAX_GROUP_SIZE
&& (groupSize % 2 == 1)), "Group ... |
python | def _convert_fastq(srafn, outdir, single=False):
"convert sra to fastq"
cmd = "fastq-dump --split-files --gzip {srafn}"
cmd = "%s %s" % (utils.local_path_export(), cmd)
sraid = os.path.basename(utils.splitext_plus(srafn)[0])
if not srafn:
return None
if not single:
out_file = [os... |
java | public void setConfigFile(final String config) {
if (config == null) {
throw (new IllegalArgumentException(
"Configuration file parameter is null"));
}
File file = new File(config);
if (file.exists()) {
if (file.isDirectory()) {
... |
python | def _spawn_fork_workers(self):
"""
通过线程启动多个worker
"""
thread = Thread(target=self._fork_workers, args=())
thread.daemon = True
thread.start() |
java | protected void addDefaultPreferencesRules(Digester digester) {
// creation of the default user settings
digester.addObjectCreate("*/" + N_WORKPLACE + "/" + N_DEFAULTPREFERENCES, CmsDefaultUserSettings.class);
digester.addSetNext("*/" + N_WORKPLACE + "/" + N_DEFAULTPREFERENCES, "setDefaultUserSe... |
java | public static ExpectedCondition<Boolean> clickCanBeDoneWithoutAlertOnElementLocated(final By locator) {
return new ExpectedCondition<Boolean>() {
/**
* {@inheritDoc}
*/
@Override
public Boolean apply(@Nullable WebDriver driver) {
try ... |
python | def mask_raster(in_raster, mask, out_raster):
"""
Mask raster data.
Args:
in_raster: list or one raster
mask: Mask raster data
out_raster: list or one raster
"""
if is_string(in_raster) and is_string(out_raster):
in_raster = [str(i... |
python | def _joint_calling(items):
"""Determine if this call feeds downstream into joint calls.
"""
jointcaller = tz.get_in(("config", "algorithm", "jointcaller"), items[0])
if jointcaller:
assert len(items) == 1, "Can only do joint calling preparation with GATK with single samples"
assert tz.ge... |
java | public ZealotKhala andNotLikePattern(String field, String pattern) {
return this.doLikePattern(ZealotConst.AND_PREFIX, field, pattern, true, false);
} |
python | def actuator_on(self, service_location_id, actuator_id, duration=None):
"""
Turn actuator on
Parameters
----------
service_location_id : int
actuator_id : int
duration : int, optional
300,900,1800 or 3600 , specifying the time in seconds the actuator
... |
java | public boolean[] getSubjectUniqueID() {
if (info == null)
return null;
try {
UniqueIdentity id = (UniqueIdentity)info.get(
X509CertInfo.SUBJECT_ID);
if (id == null)
return null;
else
return (... |
python | def _record_values_for_fit_summary_and_statsmodels(self):
"""
Store the various estimation results that are used to describe how well
the estimated model fits the given dataset, and record the values that
are needed for the statsmodels estimation results table. All values are
sto... |
python | def preprocessor(accepts, exports, flag=None):
"""Decorator to add a new preprocessor"""
def decorator(f):
preprocessors.append((accepts, exports, flag, f))
return f
return decorator |
java | @Override
public DeleteDomainResult deleteDomain(DeleteDomainRequest request) {
request = beforeClientExecution(request);
return executeDeleteDomain(request);
} |
python | def schema(self):
""" Construct the schema definition for this index """
schema_data = super(GlobalIndex, self).schema(self.hash_key)
schema_data['ProvisionedThroughput'] = self.throughput.schema()
return schema_data |
python | def list_queues(self, prefix=None, num_results=None, include_metadata=False,
marker=None, timeout=None):
'''
Returns a generator to list the queues. The generator will lazily follow
the continuation tokens returned by the service and stop when all queues
have been r... |
python | def export(name, path, replace=False):
'''
Export a zones configuration
name : string
name of the zone
path : string
path of file to export too.
replace : boolean
replace the file if it exists
'''
ret = {'name': name,
'changes': {},
'result': N... |
java | @XmlElementDecl(namespace = "http://www.drugbank.ca", name = "allele", scope = SnpEffectType.class)
public JAXBElement<String> createSnpEffectTypeAllele(String value) {
return new JAXBElement<String>(_SnpAdverseDrugReactionTypeAllele_QNAME, String.class, SnpEffectType.class, value);
} |
python | def pagination_data(self, max_number_of_links=7):
'''Returns a generator of tuples (string, page_number, clickable),
where `string` is the text of the html link, `page_number` is
the number of the page the link points to, and `clickable` is
a boolean indicating whether the link is clicka... |
java | public static ByteBuf wrappedBuffer(ByteBuf buffer) {
if (buffer.isReadable()) {
return buffer.slice();
} else {
buffer.release();
return EMPTY_BUFFER;
}
} |
java | public PageManager getPageManager() {
if (pageManager != null) {
return pageManager;
}
pageManager = (PageManager) ContainerManager.getComponent("pageManager");
return pageManager;
} |
python | def create_redditor(self, user_name, password, email=''):
"""Register a new user.
:returns: The json response from the server.
"""
data = {'email': email,
'passwd': password,
'passwd2': password,
'user': user_name}
return self.req... |
python | def set(clear=False, **defaults):
""" Set default parameters for :class:`lsqfit.nonlinear_fit`.
Use to set default values for parameters: ``svdcut``,
``debug``, ``tol``, ``maxit``, and ``fitter``. Can also set
parameters specific to the fitter specified by the ``fitter``
argumen... |
python | def calculateDatasetItems(self, scene, datasets):
"""
Syncs the scene together with the given datasets to make sure we
have the proper number of items, by removing non-existant datasets
and adding new ones.
:param scene | <XChartScene>
... |
java | @Override
public void configurationEvent(ConfigurationEvent event) {
if (event.getType() == ConfigurationEvent.CM_UPDATED && pids.contains(event.getPid())) {
populateDestinationPermissions();
runtimeSecurityService.modifyMessagingServices(this);
}
} |
python | def create_table_from(self, name, src):
"""
Create a new table with same schema as the source.
If the named table already exists, nothing happens.
Arguments:
name (str): The name of the table to create.
src (str): The name of the source table to duplicate.
... |
python | def create_new_document(self, base_name='New Document',
extension='.txt', preferred_eol=0,
autodetect_eol=True, **kwargs):
"""
Creates a new document.
The document name will be ``base_name + count + extension``
:param base_name: B... |
java | public <T> ReactiveSeq<T> getSummariesStream(ListObjectsRequest req, Function<S3ObjectSummary, T> processor) {
return ReactiveSeq.fromIterator(new S3ObjectSummaryIterator(
client, req))
.map(processor);
} |
python | def clause_texts(self):
"""The texts of ``clauses`` multilayer elements.
Non-consequent spans are concatenated with space character by default.
Use :py:meth:`~estnltk.text.Text.texts` method to supply custom separators.
"""
if not self.is_tagged(CLAUSES):
self.tag_cla... |
python | def viewport(self) -> Tuple[int, int, int, int]:
'''
tuple: The viewport of the window.
'''
return self.wnd.viewport |
python | def update_meta_info(self):
"""Extract metadata from myself"""
result = super(BaseStructuredCalibration, self).update_meta_info()
result['instrument'] = self.instrument
result['uuid'] = self.uuid
result['tags'] = self.tags
result['type'] = self.name()
minfo = se... |
java | public ReceiveMessageAction setValidators(List<MessageValidator<? extends ValidationContext>> validators) {
this.validators.clear();
this.validators.addAll(validators);
return this;
} |
java | @Override
public final void run(final IAction action) {
if (targetPart == null) {
return;
}
try {
if (!selection.isEmpty() && (selection instanceof IStructuredSelection)) {
IStructuredSelection ssel = (IStructuredSelection) selection;
O... |
python | def __search_str(self, obj, item, parent):
"""Compare strings"""
obj_text = obj if self.case_sensitive else obj.lower()
if (self.match_string and item == obj_text) or (not self.match_string and item in obj_text):
self.__report(report_key='matched_values', key=parent, value=obj) |
python | def past_participle(self):
"""
Strong verbs
I
>>> verb = StrongOldNorseVerb()
>>> verb.set_canonic_forms(["líta", "lítr", "leit", "litu", "litinn"])
>>> verb.past_participle()
[['litinn', 'litinn', 'litnum', 'litins', 'litnir', 'litna', 'litnum', 'litinna'], ['li... |
python | def wait_socket(_socket, session, timeout=1):
"""Helper function for testing non-blocking mode.
This function blocks the calling thread for <timeout> seconds -
to be used only for testing purposes.
Also available at `ssh2.utils.wait_socket`
"""
directions = session.block_directions()
if di... |
java | public Observable<ServiceResponse<TopicInner>> updateWithServiceResponseAsync(String resourceGroupName, String topicName) {
if (this.client.subscriptionId() == null) {
throw new IllegalArgumentException("Parameter this.client.subscriptionId() is required and cannot be null.");
}
if (... |
java | public Topics getList(String groupId, int perPage, int page, boolean sign) throws JinxException {
JinxUtils.validateParams(groupId);
Map<String, String> params = new TreeMap<>();
params.put("method", "flickr.groups.discuss.topics.getList");
params.put("group_id", groupId);
if (perPage > 0) {
p... |
python | def get_reg_index_value_pairs(self, regIndexList):
"""
Returns a string like NN:MMMMMMMM;NN:MMMMMMMM;...
for the T response string. NN is the index of the
register to follow MMMMMMMM is the value of the register.
"""
str = b''
regList = self._context.read... |
java | private String getText(@NotNull final ResourceBundle bundle, @NotNull final Annotation annotation, @NotNull final String defaultKey) {
Contract.requireArgNotNull("bundle", bundle);
Contract.requireArgNotNull("annotation", annotation);
Contract.requireArgNotNull("defaultKey", defaultKey);
... |
java | static Proxy parseProxySettings(String spec) {
try {
if (spec == null || spec.length() == 0) {
return null;
}
return new Proxy(spec);
} catch (URISyntaxException e) {
return null;
}
} |
python | def generate_keywords(additional_keywords=None):
"""Generates gettext keywords list
:arg additional_keywords: dict of keyword -> value
:returns: dict of keyword -> values for Babel extraction
Here's what Babel has for DEFAULT_KEYWORDS::
DEFAULT_KEYWORDS = {
'_': None,
... |
python | def save(self, model, joining=None, touch=True):
"""
Save a new model and attach it to the parent model.
:type model: eloquent.Model
:type joining: dict
:type touch: bool
:rtype: eloquent.Model
"""
if joining is None:
joining = {}
mo... |
java | public static String format(final String pattern, final Object... args)
{
return messageFormat(pattern).render(args);
} |
java | public void fireRelationReadEvent(Relation relation)
{
if (m_projectListeners != null)
{
for (ProjectListener listener : m_projectListeners)
{
listener.relationRead(relation);
}
}
} |
java | private static Optional<Expression> tryResolveMissingExpression(PlanBuilder subPlan, Expression expression)
{
Expression rewritten = subPlan.rewrite(expression);
if (rewritten != expression) {
return Optional.of(rewritten);
}
return Optional.empty();
} |
java | public final Set<String> getPropertyNames() {
Set<String> props = new TreeSet<>();
collectPropertyNames(props);
return props;
} |
python | def get_camera_imageseries(self, number_of_imageseries=10, offset=0):
""" Get smartcam image series
Args:
number_of_imageseries (int): number of image series to get
offset (int): skip offset amount of image series
"""
response = None
try:
resp... |
java | public List<Probe> sendProbe(Probe probe) throws ProbeSenderException {
List<Probe> actualProbesToSend;
try {
actualProbesToSend = splitProbe(probe);
} catch (MalformedURLException | JAXBException | UnsupportedPayloadType e) {
throw new ProbeSenderException("Issue splitting the probe.", e);
... |
python | def process_tessellate(elem, update_delta, delta, **kwargs):
""" Tessellates surfaces.
.. note:: Helper function required for ``multiprocessing``
:param elem: surface
:type elem: abstract.Surface
:param update_delta: flag to control evaluation delta updates
:type update_delta: bool
:param ... |
java | @Weight(Weight.Unit.NORMAL)
public static <T extends Closeable> T defer(@Nullable final T closeable) {
if (closeable != null) {
defer(new Deferred() {
private static final long serialVersionUID = 2265124256013043847L;
@Override
public void executeDeferred() throws Exception {
... |
python | def show_tree(self):
"""Populate the tree with profiler data and display it."""
self.initialize_view() # Clear before re-populating
self.setItemsExpandable(True)
self.setSortingEnabled(False)
rootkey = self.find_root() # This root contains profiler overhead
if root... |
java | public SearchResult<WorkflowSummary> search(
@Nullable Integer start, @Nullable Integer size,
@Nullable String sort, @Nullable String freeText, @Nonnull String query) {
Preconditions.checkNotNull(query, "query cannot be null");
SearchPb.Request.Builder request = SearchPb.Request... |
java | public String[] getSynonyms(String string)
{
if (SYNONYM_MAP != null)
{
return SYNONYM_MAP.getSynonyms(string.toLowerCase());
}
else
{
return new String[0];
}
} |
python | def merge_user_into_another_user_destination_user_id(self, id, destination_user_id):
"""
Merge user into another user.
Merge a user into another user.
To merge users, the caller must have permissions to manage both users. This
should be considered irreversible. This will d... |
python | def require(self, entity_type, attribute_name=None):
"""
The intent parser should require an entity of the provided type.
Args:
entity_type(str): an entity type
attribute_name(str): the name of the attribute on the parsed intent. Defaults to match entity_type.
R... |
java | public ResourceBundle getBundle(final String bundleName) {
LOG.info("Getting bundle: " + bundleName);
return bundles.get(bundleName);
} |
java | @Override
public synchronized void start(StartContext context) throws StartException {
final RemoteDomainConnection connection;
final ManagementChannelHandler handler;
try {
ScheduledExecutorService scheduledExecutorService = scheduledExecutorInjector.getValue();
thi... |
python | def output_schema(
self, what="", file_path=None, append=False, sort_keys=False
):
"""*Outputs JSON Schema to terminal or a file.*
By default, the schema is output for the last request and response.
The output can be limited further by:
- The property of the last instance,... |
java | private void checkTimeouts() {
long waitTime = getMs(PropertyKey.MASTER_WORKER_CONNECT_WAIT_TIME);
long retryInterval = getMs(PropertyKey.USER_RPC_RETRY_MAX_SLEEP_MS);
if (waitTime < retryInterval) {
LOG.warn("{}={}ms is smaller than {}={}ms. Workers might not have enough time to register. "
... |
python | def _import_from_importer(network, importer, basename, skip_time=False):
"""
Import network data from importer.
Parameters
----------
skip_time : bool
Skip importing time
"""
attrs = importer.get_attributes()
current_pypsa_version = [int(s) for s in network.pypsa_version.split... |
java | public void close() {
for (Entry<String, OResourcePool<String, DB>> pool : pools.entrySet()) {
for (DB db : pool.getValue().getResources()) {
pool.getValue().close();
try {
OLogManager.instance().debug(this, "Closing pooled database '%s'...", db.getName());
((ODatabas... |
python | def _get_encrypted_credentials(self, context):
"""
[MS-CSSP] 3.1.5 Processing Events and Sequencing Rules - Step 5
https://msdn.microsoft.com/en-us/library/cc226791.aspx
After the client has verified the server's authenticity, it encrypts
the user's credentials with the authenti... |
python | def make_table_parser() -> cmd2.argparse_completer.ACArgumentParser:
"""Create a unique instance of an argparse Argument parser for processing table arguments.
NOTE: The two cmd2 argparse decorators require that each parser be unique, even if they are essentially a deep copy
of each other. For cases like ... |
python | def _set_trusted_option_if_needed(repostr, trusted):
'''
Set trusted option to repo if needed
'''
if trusted is True:
repostr += ' [trusted=yes]'
elif trusted is False:
repostr += ' [trusted=no]'
return repostr |
java | public static ItemIdValue makeItemIdValue(String id, String siteIri) {
return factory.getItemIdValue(id, siteIri);
} |
java | private void initIndex() throws Exception {
// 0. Add the tasklog template
GetIndexTemplatesResponse result = elasticSearchClient.admin()
.indices()
.prepareGetTemplates("tasklog_template")
.execute()
.actionGet();
if (result.getIndexTemplates().... |
java | public static String combineToPath(List<String> pParts) {
if (pParts != null && pParts.size() > 0) {
StringBuilder buf = new StringBuilder();
Iterator<String> it = pParts.iterator();
while (it.hasNext()) {
String part = it.next();
buf.append(es... |
python | def ARPLimitExceeded_originator_switch_info_switchIdentifier(self, **kwargs):
"""Auto Generated Code
"""
config = ET.Element("config")
ARPLimitExceeded = ET.SubElement(config, "ARPLimitExceeded", xmlns="http://brocade.com/ns/brocade-notification-stream")
originator_switch_info = ... |
python | def send_api_request(self, method, url, params={}, valid_parameters=[], needs_api_key=False):
"""
Sends the url with parameters to the requested url, validating them
to make sure that they are what we expect to have passed to us
:param method: a string, the request method you want to ma... |
python | def for_json(self):
"""Return date ISO8601 string formats for datetime, date, and time values, milliseconds for intervals"""
value = super(DatetimeField, self).for_json()
# Order of instance checks matters for proper inheritance checks
if isinstance(value, pendulum.Interval):
... |
java | public static StreamShardHandle convertToStreamShardHandle(StreamShardMetadata streamShardMetadata) {
Shard shard = new Shard();
shard.withShardId(streamShardMetadata.getShardId());
shard.withParentShardId(streamShardMetadata.getParentShardId());
shard.withAdjacentParentShardId(streamShardMetadata.getAdjacentPa... |
java | public static final boolean collinear(final Point2D p1, final Point2D p2, final Point2D p3)
{
return Geometry.collinear(p1, p2, p3);
} |
java | public void drawOval(float x1, float y1, float width, float height,
int segments) {
drawArc(x1, y1, width, height, segments, 0, 360);
} |
java | public SparseDoubleVector generateContext(Queue<String> prevWords,
Queue<String> nextWords) {
SparseDoubleVector meaning = new CompactSparseVector(indexVectorLength);
addContextTerms(meaning, prevWords, -1 * prevWords.size());
addContextTerms(meaning... |
python | async def _raise_for_status(response):
"""Raise an appropriate error for a given response.
Arguments:
response (:py:class:`aiohttp.ClientResponse`): The API response.
Raises:
:py:class:`aiohttp.web_exceptions.HTTPException`: The appropriate
error for the response's status.
This fu... |
python | def match(self, abstract_consonant: AbstractConsonant) -> bool:
"""
A real consonant matches an abstract consonant if and only if the required features of the abstract consonant
are also features of the real consonant.
:param abstract_consonant: AbstractConsonant
:return: bool
... |
python | def apply_effect_expression_filters(
effects,
gene_expression_dict,
gene_expression_threshold,
transcript_expression_dict,
transcript_expression_threshold):
"""
Filter collection of varcode effects by given gene
and transcript expression thresholds.
Parameters
... |
java | public Stream<Entry<MatchedName, MetricValue>> filter(Context t) {
return t.getTSData().getCurrentCollection().get(this::match, x -> true).stream()
.flatMap(this::filterMetricsInTsv);
} |
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