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if (event.type == 'keyup') jQuery.ppa.o = 0;
function autocomplete(event) { /* if pressing enter, fire a click on the selected line */ if (event.keyCode == 13) { if (jQuery.ppa.i > 0) { jQuery.ppa.fklist.find('tr').eq(jQuery.ppa.i).click(); } hideAc(); return false; } /* ignoring 38:up and 40:down */ else if ( event.keyCode == 38 || event.keyCode == 40 ) { ...
function autocompleteCallback() { var name = this.attr('name'); var select = this.parent().parent().find('select[name ^= field]'); if (select) { return select.val(); } else return 'noparam';
function autocompleteCallback(node, params) { var name = node.attr('name'); var select = node.parent().parent().find('select[name ^= field]'); if (select.length == 1) { params.field = select.val(); }
function autocompleteCallback() { var name = this.attr('name'); var select = this.parent().parent().find('select[name ^= field]'); if (select) { return select.val(); } else return 'noparam';}
this.relayEvents(k, ['done']);
this.relayEvents(k, ['done', 'fail']);
autoTag : function(id) { var callParams = []; callParams.push(id); callParams.push({ callback : function(data) { var k = new Gemma.WaitHandler(); this.relayEvents(k, ['done']); k.handleWait(data, false); k.on('done', function(payload) { this.fireEvent('tagsUpdated', payload); ...
alert("Hi, this isn't set up yet!");
AnnotationController.autoTag.apply(this, callParams);
autoTag : function(id) { /* * TODO: call AnnotationController.annotate(id). Need a progress bar of some sort. */ alert("Hi, this isn't set up yet!"); },
if (settings.fixed_height == 0) { var $ht = $(this).height(); $(this).parent().animate({height: $ht}); }
before:function(current, next) { var currId = (currId=$(current).attr('id')).substring(currId.lastIndexOf('_')+1) var nextId = (nextId=$(next).attr('id')).substring(nextId.lastIndexOf('_')+1) $('#views_slideshow_thumbnailhover_div_breakout_teaser_' + settings.id + '_' + currId).removeClass('a...
firstInitDone = true;
this.firstInitDone = true;
Gemma.BioMaterialEditor = function(config) { return { firstInitDone : false, originalConfig : config, expressionExperiment : { id : config.eeId, classDelegatingFor : "ExpressionExperiment" }, /** * We make two ajax calls; the first gets the biomaterials, the second gets the experimentalfactors. These are *...
return {
this.originalConfig = config; this.expressionExperiment = { id : config.eeId, classDelegatingFor : "ExpressionExperiment" };
Gemma.BioMaterialEditor = function(config) { return { firstInitDone : false, originalConfig : config, expressionExperiment : { id : config.eeId, classDelegatingFor : "ExpressionExperiment" }, /** * We make two ajax calls; the first gets the biomaterials, the second gets the experimentalfactors. These are *...
firstInitDone : false, originalConfig : config, expressionExperiment : { id : config.eeId, classDelegatingFor : "ExpressionExperiment" }, firstCallback : function(data) { ExperimentalDesignController.getExperimentalFactors(this.expressionExperiment, function(factorData) { config = { factors : factorData, bioMateria...
Gemma.BioMaterialEditor.superclass.constructor.call(this, config); }
Gemma.BioMaterialEditor = function(config) { return { firstInitDone : false, originalConfig : config, expressionExperiment : { id : config.eeId, classDelegatingFor : "ExpressionExperiment" }, /** * We make two ajax calls; the first gets the biomaterials, the second gets the experimentalfactors. These are *...
var link = "http: + "&hgt.customText=" + Gemma.GEMMA_BASE_URL + "blatTrack.html?id=" + d.id;
var link = UCSC_TRACKS + "?org=" + organism + "&pix=850&db=" + database + "&hgt.customText=" + Gemma.BASEURL + "blatTrack.html?id=" + d.id;
blatResRender : function(d, metadata, record, row, column, store) { if (!d.targetChromosome) { return ""; } var res = "chr" + d.targetChromosome.name + " (" + d.strand + ") " + d.targetStart + "-" + d.targetEnd; var organism = d.targetChromosome.taxon; var database = this.getDb(organism); if (database) { var...
if (!d.targetChromosome) {
if (!d.targetChromosomeName) {
blatResRender : function(d, metadata, record, row, column, store) { if (!d.targetChromosome) { return ""; } var res = "chr" + d.targetChromosome.name + " (" + d.strand + ") " + d.targetStart + "-" + d.targetEnd; var organism = d.targetChromosome.taxon; var database = this.getDb(organism); if (database) { var...
var res = "chr" + d.targetChromosome.name + " (" + d.strand + ") " + d.targetStart + "-" + d.targetEnd;
var res = "chr" + d.targetChromosomeName + " (" + d.strand + ") " + d.targetStart + "-" + d.targetEnd;
blatResRender : function(d, metadata, record, row, column, store) { if (!d.targetChromosome) { return ""; } var res = "chr" + d.targetChromosome.name + " (" + d.strand + ") " + d.targetStart + "-" + d.targetEnd; var organism = d.targetChromosome.taxon; var database = this.getDb(organism); if (database) { var...
var organism = d.targetChromosome.taxon;
var organism = d.taxon;
blatResRender : function(d, metadata, record, row, column, store) { if (!d.targetChromosome) { return ""; } var res = "chr" + d.targetChromosome.name + " (" + d.strand + ") " + d.targetStart + "-" + d.targetEnd; var organism = d.targetChromosome.taxon; var database = this.getDb(organism); if (database) { var...
var link = UCSC_TRACKS + "?org=" + organism + "&pix=850&db=" + database + "&hgt.customText=" + Gemma.BASEURL + "blatTrack.html?id=" + d.id;
var link = UCSC_TRACKS + "?org=" + organism.commonName + "&pix=850&db=" + database + "&hgt.customText=" + Gemma.BASEURL + "/blatTrack.html?id=" + d.id;
blatResRender : function(d, metadata, record, row, column, store) { if (!d.targetChromosome) { return ""; } var res = "chr" + d.targetChromosome.name + " (" + d.strand + ") " + d.targetStart + "-" + d.targetEnd; var organism = d.targetChromosome.taxon; var database = this.getDb(organism); if (database) { var...
var link = "http: + "&hgt.customText=" + Gemma.GEMMA_BASE_URL + "blatTrack.html?id=" + d.id; res = res + "&nbsp;<a title='Genome browser view (opens in new window)' target='_blank' href='" + link + "'><img src='" + Gemma.UCSC_ICON + "' /></a>";
var link = "http: "&hgt.customText=" + Gemma.GEMMA_BASE_URL + "blatTrack.html?id=" + d.id; res = res + "&nbsp;<a title='Genome browser view (opens in new window)' target='_blank' href='" + link + "'><img src='" + Gemma.UCSC_ICON + "' /></a>";
blatResRender : function(d, metadata, record, row, column, store) { if (!d.targetChromosome) { return ""; } var res = "chr" + d.targetChromosome.name + " (" + d.strand + ") " + d.targetStart + "-" + d.targetEnd; var organism = d.targetChromosome.taxon; var database = this.getDb(organism); if (database) { var...
if (onSuccessFn) onSuccessFn(r.getResult().Item);
if (onSuccessFn) onSuccessFn(r.Item);
blockingDequeueItemFromList: function(id, timeOut, onSuccessFn, onErrorFn) { this.gateway.getFromService('BlockingDequeueItemFromList', { Id: id || null, TimeOut: timeOut || null }, function(r) { if (onSuccessFn) onSuccessFn(r.getResult().Item); }, onErrorFn || RedisClient.errorFn); },
if (onSuccessFn) onSuccessFn(r.getResult().Item);
if (onSuccessFn) onSuccessFn(r.Item);
blockingPopItemFromList: function(id, timeOut, onSuccessFn, onErrorFn) { this.gateway.getFromService('BlockingPopItemFromList', { Id: id || null, TimeOut: timeOut || null }, function(r) { if (onSuccessFn) onSuccessFn(r.getResult().Item); }, onErrorFn || RedisClient.errorFn); },
if (onSuccessFn) onSuccessFn(r.getResult().Item);
if (onSuccessFn) onSuccessFn(r.Item);
blockingRemoveStartFromList: function(id, timeOut, onSuccessFn, onErrorFn) { this.gateway.getFromService('BlockingRemoveStartFromList', { Id: id || null, TimeOut: timeOut || null }, function(r) { if (onSuccessFn) onSuccessFn(r.getResult().Item); }, onErrorFn || RedisClient.errorFn); },
this.button.blur();
if (this.button) { this.button.blur(); }
blur: function() { this.button.blur(); }
}
},
blur: function() { this.button.blur(); }
if (book.asin && book.asin.length == 10) return text + ' <a target="_blank" title="explore this book @ amazon" href="'+amz_url.replace("asin", book.asin)+'">'+'&#187;'+'</a>';
if (book.asin && book.asin.length == 10) return text + ' <a target="_blank" title="explore this book @ amazon" href="'+amz_url.replace("asin", book.asin)+'">'+'&#187;&#187;'+'</a>';
function book_link(book){ text = book.title; if(book.author != "unknown") text = text + " by " + book.author; if (book.asin && book.asin.length == 10) return text + ' <a target="_blank" title="explore this book @ amazon" href="'+amz_url.replace("asin", book.asin)+'">'+'&#187;'+'</a>'; return text; }
if (not_to_be_shown(this)) return; $("#borrowed_table").append("<tr id=" + this.key + "><td>" + this.owner + "</td><td>" + book_link(this) +
$("#borrowed_table").append("<tr id=" + this.key + "\" class=\""+ toggleOddEven() + "\"><td>" + this.owner + "</td><td>" + book_link(this) +
borrowedBookrow: function(){ if (not_to_be_shown(this)) return; $("#borrowed_table").append("<tr id=" + this.key + "><td>" + this.owner + "</td><td>" + book_link(this) + "</td><td></td><td class='action'>" + return_link(this, "return", "return book to owner") + "</td></tr>");}
html : '<div id="downloads"> ' + e.processedExpressionVectorCount + '&nbsp;&nbsp; <a title="click to download the tab delimited data" href="#" onClick="fetchData(true,' + e.id + ', \'text\', null, null)">Filtered</a> &nbsp;&nbsp;'
html : '<div id="downloads"> ' + this.renderProcessedExpressionVectorCount(e) + '&nbsp;&nbsp;' + '<i>Downloads:</i> &nbsp;&nbsp; <a title="click to download the tab delimited data" href="#" onClick="fetchData(true,' + e.id + ', \'text\', null, null)">Filtered</a> &nbsp;&nbsp;'
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
width : 200
width : 400
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
taxon : e.taxon
taxon : e.parentTaxon
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
manager.on('differential', function() { window.location.reload(true); });
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
+ ')"><img src="/Gemma/images/icons/pencil.png" alt="view tags" title="view tags"/></a>';
+ ',' + e.taxonId +')"><img src="/Gemma/images/icons/pencil.png" alt="view tags" title="view tags"/></a>';
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
name : factors[i],
name : cleanName(fn),
build : function(rows) { var factors = rows[0].factors; var record = []; var columns = []; columns.push({ header : "Assays", dataIndex : "count", sortable : "true", tooltip : "How many assays are in this group" }); for (var i = 0; i < factors.length; ++i) { record.push({ name : factors[i...
header : factors[i], dataIndex : factors[i],
header : fn, dataIndex : cleanName(fn),
build : function(rows) { var factors = rows[0].factors; var record = []; var columns = []; columns.push({ header : "Assays", dataIndex : "count", sortable : "true", tooltip : "How many assays are in this group" }); for (var i = 0; i < factors.length; ++i) { record.push({ name : factors[i...
tooltip : factors[i]
tooltip : fn
build : function(rows) { var factors = rows[0].factors; var record = []; var columns = []; columns.push({ header : "Assays", dataIndex : "count", sortable : "true", tooltip : "How many assays are in this group" }); for (var i = 0; i < factors.length; ++i) { record.push({ name : factors[i...
e.taxonId + ',' + this.editable +
e.taxonId + ',' + this.editable + ',' + (e.validatedAnnotations !== null) +
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
var taggerurl = '<a href="#" onClick="return Ext.getCmp(\'eemanager\').tagger(' + e.id + ',' + e.taxonId
var taggerurl = '<a href="#" onClick="return Ext.getCmp(\'eemanager\').tagger(' + e.id + ',' + e.taxonId+ ',' + this.editable
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
collapsible : true,
collapsible : false,
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
html : e.processedExpressionVectorCount, width : 60
html : '<div id="downloads"> ' + e.processedExpressionVectorCount + '&nbsp;&nbsp; <a title="click to download the tab delimited data" href="#" onClick="fetchData(true,' + e.id + ', \'text\', null, null)">Filtered</a> &nbsp;&nbsp;' + '<a href="#" title="click to download the tab delimited data" onClick="fetchData(false...
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
adminLinks = '<a href="#" onClick="Ext.getCmp(\'eemanager\').updateEEReport(' +
adminLinks = '<span style="cursor:pointer" onClick="Ext.getCmp(\'eemanager\').updateEEReport(' +
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
')"><img src="/Gemma/images/icons/arrow_refresh_small.png" ext:qtip="Refresh statistics" title="refresh"/></a>' +
',\'admin-links\'' + ')"><img src="/Gemma/images/icons/arrow_refresh_small.png" ext:qtip="Refresh statistics" title="refresh"/></span>' +
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
'" ><img src="/Gemma/images/icons/wrench.png" ext:qtip="Go to editor page for this experiment" title="edit"/></a>&nbsp;';
'" ><img src="/Gemma/images/icons/wrench.png" ext:qtip="Go to editor page for this experiment" title="edit"/></span>&nbsp;';
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
'<a href="#" onClick="return Ext.getCmp(\'eemanager\').deleteExperiment(' +
'<span style="cursor:pointer" onClick="return Ext.getCmp(\'eemanager\').deleteExperiment(' +
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
')"><img src="/Gemma/images/icons/cross.png" ext:qtip="Delete the experiment from the system" title="delete" /></a>&nbsp;';
')"><img src="/Gemma/images/icons/cross.png" ext:qtip="Delete the experiment from the system" title="delete" /></span>&nbsp;';
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
var taggerurl = '<a href="#" onClick="return Ext.getCmp(\'eemanager\').tagger(' + e.id + ',' + e.taxonId + ',' + this.editable + ')"><img src="/Gemma/images/icons/pencil.png" alt="view tags" title="view tags"/></a>';
var taggerurl = '<span style="cursor:pointer" onClick="return Ext.getCmp(\'eemanager\').tagger(' + e.id + ',' + e.taxonId + ',' + this.editable + ')"><img src="/Gemma/images/icons/pencil.png" alt="view tags" title="view tags"/></span>';
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
manager.on('pubmedUpdated', function(e) { var html = this.getPubMedHtml(e); Ext.getCmp('pubmed-region-wrap').remove(Ext.getCmp('pubmed-region')); Ext.DomHelper.append('pubmed-region-wrap', html); }.createDelegate(this)); manager.on('pubmedRemove', function(success) { if (success) { var r = Ext.getCmp('pubmed-region-wr...
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
Ext.getCmp('update-button-region').show();
Ext.getCmp('update-button-region').show(true);
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
Ext.getCmp('update-button-region').hide();
Ext.getCmp('update-button-region').hide(true);
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
html : '<a href="#" onClick="Ext.getCmp(\'ee-details-panel\').save(' +
html : '<span style="cursor:pointer" onClick="Ext.getCmp(\'ee-details-panel\').save(' +
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
',[\'shortname\',\'name\',\'description\'])" ><img src="/Gemma/images/icons/database_save.png" title="Click to save changes" alt="Click to save changes"/></a>',
',[\'shortname\',\'name\',\'description\'])" ><img src="/Gemma/images/icons/database_save.png" ext:qtip="Click to save changes" alt="Click to save changes"/></span>',
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
'<i>Downloads:</i> &nbsp;&nbsp; <a title="click to download the tab delimited data" href="#" onClick="fetchData(true,' +
'<i>Downloads:</i> &nbsp;&nbsp; <span class="link" ext:qtip="Download the tab delimited data" onClick="fetchData(true,' +
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
', \'text\', null, null)">Filtered</a> &nbsp;&nbsp;' + '<a href="#" title="click to download the tab delimited data" onClick="fetchData(false,' +
', \'text\', null, null)">Filtered</span> &nbsp;&nbsp;' + '<span class="link" ext:qtip="Download the tab delimited data" onClick="fetchData(false,' +
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
', \'text\', null, null)">Unfiltered</a> &nbsp;&nbsp;' +
', \'text\', null, null)">Unfiltered</span> &nbsp;&nbsp;' +
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
width : 200
width : 700
build : function(e) { var manager = new Gemma.EEManager({ editable : this.editable, id : "eemanager" }); this.manager = manager; // // /* // * Create a store with one record. // */ // var store = new Ext.data.Store({ // proxy : new Ext.data.MemoryProxy([e]), // reader : new Ext.data.ListRangeReader...
var DesignMatrixRow = Ext.data.Record.create(record);
var designMatrixRow = Ext.data.Record.create(record);
build : function(rows) { var factors = rows[0].factors; var record = []; var columns = []; columns.push({ header : "Assays", dataIndex : "count", sortable : "true", tooltip : "How many assays are in this group" }); for (var i = 0; i < factors.length; ++i) { var fn = factors[i] ; record.p...
reader : new Ext.data.ArrayReader({}, DesignMatrixRow),
reader : new Ext.data.ArrayReader({}, designMatrixRow),
build : function(rows) { var factors = rows[0].factors; var record = []; var columns = []; columns.push({ header : "Assays", dataIndex : "count", sortable : "true", tooltip : "How many assays are in this group" }); for (var i = 0; i < factors.length; ++i) { var fn = factors[i] ; record.p...
th.insert(new Element('span').update(h.title));
th.insert(new Element('span').update(h.title || ''));
buildHeaders : function(headers) { this.head.update(); this.columns = []; var tr = new Element('tr'); this.head.insert(tr); headers.each(function(h,i) { var th = new Element('th'); if (h.width) { th.setStyle({width:h.width+'%'}); } if (h.sortable) { th.observe('click',function() {this.sort(i)}.bind(...
th.insert(new Element('span').update(h.title || ''));
th.insert(new Element('span').update(h.title));
buildHeaders : function(headers) { this.head.update(); this.columns = []; var tr = new Element('tr'); this.head.insert(tr); headers.each(function(h,i) { var th = new Element('th'); if (h.width) { th.setStyle({width:h.width+'%'}); } if (h.sortable) { th.observe('click',function() {this.sort(i)}.bind(...
axis.c2p = function (p) { return axis.max - p / axis.scale; };
axis.c2p = function (c) { return it(m - c / s); };
axis.c2p = function (p) { return axis.max - p / axis.scale; };
var s = row.getMarginBoxSize();
var s = row.getContentBoxSize();
calculateHeights : function () { //grab all rows in the grid body document.id(this.grid.gridTableBody).getChildren().each(function(row){ row = document.id(row); var data = row.retrieve('jxRowData'); var s = row.getMarginBoxSize(); this.heights[data.row] = s.height; },this);...
if (Browser.Engine.webkit) { this.heights[data.row] -= 1; }
calculateHeights : function () { //grab all rows in the grid body document.id(this.grid.gridTableBody).getChildren().each(function(row){ row = document.id(row); var data = row.retrieve('jxRowData'); var s = row.getMarginBoxSize(); this.heights[data.row] = s.height; },this);...
var oldPos = model.getPosition(); maxWidth = 0;
calculateWidth : function (rowHeader) { //if this gets called then we assume that we want to calculate the width rowHeader = $defined(rowHeader) ? rowHeader : false; var maxWidth; //calculate the width var model = this.grid.getModel(); var oldPos = model.getPosition();...
while (model.valid()) { this.options.renderer.render(); var text = $(this.options.renderer); var klass = 'jxGridCell'; if (this.grid.row.useHeaders() && this.options.name === this.grid.row .getRowHeaderColumn()) { klass = 'jxGridRowHead';
if (this.options.renderMode == 'fixed' && model.valid) { var t = new Element('span', { 'class': 'jxGridCellContent', html: 'a', styles: { width: this.options.width
calculateWidth : function (rowHeader) { //if this gets called then we assume that we want to calculate the width rowHeader = $defined(rowHeader) ? rowHeader : false; var maxWidth; //calculate the width var model = this.grid.getModel(); var oldPos = model.getPosition();...
var s = this.measure(text, klass, rowHeader, model.getPosition()); if (s.width > maxWidth) { maxWidth = s.width;
}); var s = this.measure(t,'jxGridCell'); maxWidth = s.content.width; maxCellWidth = s.cell.width; } else { var oldPos = model.getPosition(); maxWidth = maxCellWidth = 0; while (model.valid()) { this.options.renderer.render(); var text = $(this.options.renderer); var klass = 'jxGridCell'; if (this.grid.row.useHeaders...
calculateWidth : function (rowHeader) { //if this gets called then we assume that we want to calculate the width rowHeader = $defined(rowHeader) ? rowHeader : false; var maxWidth; //calculate the width var model = this.grid.getModel(); var oldPos = model.getPosition();...
if (model.hasNext()) { model.next(); } else { break;
if (!(this.grid.row.useHeaders() && this.options.name === this.grid.row.getRowHeaderColumn())) { klass = 'jxGridColHead'; if (this.isEditable()) { klass += ' jxColEditable'; } if (this.isResizable()) { klass += ' jxColResizable'; } if (this.isSortable()) { klass += ' jxColSortable'; } s = this.measure(this.domObj.clone...
calculateWidth : function (rowHeader) { //if this gets called then we assume that we want to calculate the width rowHeader = $defined(rowHeader) ? rowHeader : false; var maxWidth; //calculate the width var model = this.grid.getModel(); var oldPos = model.getPosition();...
if (!(this.grid.row.useHeaders() && this.options.name === this.grid.row .getRowHeaderColumn())) { klass = 'jxGridColHead'; if (this.isEditable()) { klass += ' jxColEditable'; } if (this.isResizable()) { klass += ' jxColResizable'; } if (this.isSortable()) { klass += ' jxColSortable'; } s = this.measure(this.domObj.clon...
calculateWidth : function (rowHeader) { //if this gets called then we assume that we want to calculate the width rowHeader = $defined(rowHeader) ? rowHeader : false; var maxWidth; //calculate the width var model = this.grid.getModel(); var oldPos = model.getPosition();...
this.cellWidth = maxCellWidth;
calculateWidth : function (rowHeader) { //if this gets called then we assume that we want to calculate the width rowHeader = $defined(rowHeader) ? rowHeader : false; var maxWidth; //calculate the width var model = this.grid.getModel(); var oldPos = model.getPosition();...
totalWidth += Jx.getNumber(col.getWidth()); if (rowHeader) { rowHeaderWidth = col.getWidth();
if (!col.isHidden() && !(col.name == this.grid.row.options.headerColumn)) { totalWidth += Jx.getNumber(col.getWidth()); if (rowHeader) { rowHeaderWidth = col.getWidth(); }
calculateWidths: function () { //to calculate widths we loop through each column var expand = null; var totalWidth = 0; var rowHeaderWidth = 0; this.columns.each(function(col,idx){ //are we checking the rowheader? var rowHeader = false; if (col.name == this.grid.row.opt...
var containerWidth = this.grid.gridObj.getParent().getContentBoxSize(); var gridSize = this.grid.gridObj.getMarginBoxSize(); if (containerWidth.width > totalWidth) {
var gridSize = this.grid.gridObj.getContentBoxSize(); if (gridSize.width > totalWidth) {
calculateWidths: function () { //to calculate widths we loop through each column var expand = null; var totalWidth = 0; var rowHeaderWidth = 0; this.columns.each(function(col,idx){ //are we checking the rowheader? var rowHeader = false; if (col.name == this.grid.row.opt...
var expand = null; var totalWidth = 0; this.columns.each(function(col,idx){ var rowHeader = false; if (col.name == this.grid.row.options.headerColumn) { rowHeader = true; } if (col.options.renderMode == 'fixed') { col.setWidth(col.options.width); } else if (col.options.renderMode == 'fit') { col.calculateWidth(rowHe...
var expand = null; var totalWidth = 0; var rowHeaderWidth = 0; this.columns.each(function(col,idx){ var rowHeader = false; if (col.name == this.grid.row.options.headerColumn) { rowHeader = true; } if (col.options.renderMode == 'fixed') { col.calculateWidth(); } else if (col.options.renderMode == 'fit') { col.calcula...
calculateWidths: function () { //to calculate widths we loop through each column var expand = null; var totalWidth = 0; this.columns.each(function(col,idx){ //are we checking the rowheader? var rowHeader = false; if (col.name == this.grid.row.options.headerColumn) { rowHeader = ...
totalWidth += Jx.getNumber(col.getWidth());
totalWidth += Jx.getNumber(col.getCellWidth());
calculateWidths: function () { //to calculate widths we loop through each column var expand = null; var totalWidth = 0; var rowHeaderWidth = 0; this.columns.each(function(col,idx){ //are we checking the rowheader? var rowHeader = false; if (col.name == this.grid.row.opt...
var leftOverSpace = gridSize.width - totalWidth;
var leftOverSpace = gridSize.width - totalWidth - 2;
calculateWidths: function () { //to calculate widths we loop through each column var expand = null; var totalWidth = 0; var rowHeaderWidth = 0; this.columns.each(function(col,idx){ //are we checking the rowheader? var rowHeader = false; if (col.name == this.grid.row.opt...
expand.setWidth(leftOverSpace);
expand.setWidth(leftOverSpace, true);
calculateWidths: function () { //to calculate widths we loop through each column var expand = null; var totalWidth = 0; var rowHeaderWidth = 0; this.columns.each(function(col,idx){ //are we checking the rowheader? var rowHeader = false; if (col.name == this.grid.row.opt...
var leftOverSpace = gridSize.width - totalWidth - 2;
var leftOverSpace = gridSize.width - totalWidth if (Browser.Engine.gecko) { leftOverSpace -= this.getColumnCount(true); } else { leftOverSpace -= 2; }
calculateWidths: function () { //to calculate widths we loop through each column var expand = null; var totalWidth = 0; var rowHeaderWidth = 0; this.columns.each(function(col,idx){ //are we checking the rowheader? var rowHeader = false; if (col.name == this.grid.row.opt...
this.grid.gridTable.setContentBoxSize({'width': totalWidth - rowHeaderWidth}); this.grid.colTable.setContentBoxSize({'width': totalWidth - rowHeaderWidth});
this.grid.gridTable.setContentBoxSize({'width': totalWidth}); this.grid.colTable.setContentBoxSize({'width': totalWidth});
calculateWidths: function () { //to calculate widths we loop through each column var expand = null; var totalWidth = 0; var rowHeaderWidth = 0; this.columns.each(function(col,idx){ //are we checking the rowheader? var rowHeader = false; if (col.name == this.grid.row.opt...
post_new_book(obj.value, obj.info, obj.id); }
showLoadingGif(); post_new_book(obj.value, obj.info, obj.id); hideLoadingGif(); }
callback: function(obj){ post_new_book(obj.value, obj.info, obj.id); }
var k = new Gemma.WaitHandler(); k.handleWait(data, true); deasw.relayEvents(k, ['done']); Ext.getBody().unmask(); k.on('done', function(payload) { this.fireEvent('differential', payload) }); }.createDelegate(this),
var k = new Gemma.WaitHandler({ throbberEl : throbberEl }); this.relayEvents(k, ['done', 'fail']); k.handleWait(data, false); k.on('done', function(payload) { this.fireEvent('reportUpdated', payload); }); }.createDelegate(this),
callback : function(data) { var k = new Gemma.WaitHandler(); k.handleWait(data, true); deasw.relayEvents(k, ['done']); Ext.getBody().unmask(); k.on('done', function(payload) { this.fireEvent('differential', payload) }); ...
Ext.getCmp('biomaterial-grid-panel').init();
callback : function() { Ext.getCmp('experimental-design-upload-form-window').close(); Ext.Msg.alert("Success", "Design imported."); Ext.getCmp('experimental-factor-grid').getStore().reload(); // Ext.getCmp('factor-value-grid').getStore().reload(); // should have started out empty anyway. Ext.get...
if (!groupId)
if (!groupId){
callback : function() { // for selecting the desired row, if given groupid given if (!groupId) return; var groupPanel = Ext.getCmp('gene-group-panel'); var row = groupPanel.getStore().findExact("id", groupId); groupPanel.getSelectionModel().selectRow(row, false); }
}
callback : function() { // for selecting the desired row, if given groupid given if (!groupId) return; var groupPanel = Ext.getCmp('gene-group-panel'); var row = groupPanel.getStore().findExact("id", groupId); groupPanel.getSelectionModel().selectRow(row, false); }
geneData.push([genes[i].id, genes[i].taxon.scientificName,
geneData.push([genes[i].id, genes[i].taxonScientificName,
callback : function(genes) { var geneData = []; var warned = false; for (var i = 0; i < genes.length; ++i) { if (i >= Gemma.MAX_GENES_PER_QUERY) { if (!warned) { Ext.Msg.alert("Too many genes", "You can only search up to " + Gemma.MAX_GENES_PER_QUERY ...
callback : function() { sp.destroy(); Gemma.SecurityManager.updateSecurityLink( elid, securityInfo.publiclyReadable, shared); },
callback : function(securityInfo) { showSecurityForm(securityInfo); },
callback : function() { sp.destroy(); Gemma.SecurityManager.updateSecurityLink( elid, securityInfo.publiclyReadable, shared); },
width: fWidth + 'px', height: (fHeight - 30) + 'px',
width: shimWidth + 'px', height: shimHeight + 'px',
callback: function() { urls = []; var index = 0; urls.push([options.href, options.title]); // calculate top and left offset for the lightbox var pageScroll = Ext.fly(document).getScroll(); var lightboxTop = pageScroll.top + (Ext.lib.Dom.getViewportHeight() / 10); var lightboxLeft = pageS...
this.setUrl(index, fWidth, fHeight);
this.setUrl(index, shimWidth, shimHeight);
callback: function() { urls = []; var index = 0; urls.push([options.href, options.title]); // calculate top and left offset for the lightbox var pageScroll = Ext.fly(document).getScroll(); var lightboxTop = pageScroll.top + (Ext.lib.Dom.getViewportHeight() / 10); var lightboxLeft = pageS...
this.relayEvents(k, ['done']);
this.relayEvents(k, ['done', 'fail']);
callback : function(data) { var k = new Gemma.WaitHandler({ throbberEl : throbberEl }); this.relayEvents(k, ['done']); k.handleWait(data, false); k.on('done', function(payload) { this.fireEvent('reportUpdated', payload); }); }.createDelegate(this)
callback : function(data) { if (!groupId) { return; } }
var callback = function(data) { if (data) { this.ownerCt.getStore().remove(rec); this.ownerCt.getStore().clearSelected(); this.resetBut.disable(); this.deleteBut.disable(); this.commitBut.disable(); this.ownerCt.loadMask.hide(); } }.createDelegate(this);
callback : function(data) { // for selecting the desired row, if given groupid given if (!groupId) { return; } // FIXME: this doesn't work because for data that takes awhile to load. // Callback returns prematurley, data isn't done loading, if the following code // selects an empty reco...
var k = new Gemma.WaitHandler();
var k = new Gemma.WaitHandler({ throbberEl : throbberEl });
callback : function(data) { var k = new Gemma.WaitHandler(); this.relayEvents(k, ['done']); k.handleWait(data, false); k.on('done', function(payload) { this.fireEvent('reportUpdated', payload); }); }.createDelegate(this)
width: (fWidth - 20) + 'px', height: (fHeight - 50) + 'px',
width: fWidth + 'px', height: (fHeight - 30) + 'px',
callback: function() { urls = []; var index = 0; urls.push([options.href, options.title]); // calculate top and left offset for the lightbox var pageScroll = Ext.fly(document).getScroll(); var lightboxTop = pageScroll.top + (Ext.lib.Dom.getViewportHeight() / 10); var lightboxLeft = pageS...
callback : function(){ console.log(groupId); if (!groupId){
callback : function() { if (!groupId)
callback : function(){ //for selecting the desired row console.log(groupId); if (!groupId){ return; } var groupPanel = Ext.getCmp('gene-group-panel'); var row = groupPanel.getStore().findExact(id,groupId); groupPanel.getSelectionModel().selectRow(row, false); }
}
callback : function(){ //for selecting the desired row console.log(groupId); if (!groupId){ return; } var groupPanel = Ext.getCmp('gene-group-panel'); var row = groupPanel.getStore().findExact(id,groupId); groupPanel.getSelectionModel().selectRow(row, false); }
var row = groupPanel.getStore().findExact(id,groupId);
var row = groupPanel.getStore().findExact("id", groupId);
callback : function(){ //for selecting the desired row console.log(groupId); if (!groupId){ return; } var groupPanel = Ext.getCmp('gene-group-panel'); var row = groupPanel.getStore().findExact(id,groupId); groupPanel.getSelectionModel().selectRow(row, false); }
k.handleWait(data, 'pubmedUpdated', false);
k.on('done', function(e) { window.location.reload(); }, this) k.handleWait(data, false);
callback : function(data) { var k = new Gemma.WaitHandler(); k.handleWait(data, 'pubmedUpdated', false); }.createDelegate(this)
callback : function() {
callback : function(data) {
callback : function() { // for selecting the desired row, if given groupid given if (!groupId){ return; } var groupPanel = Ext.getCmp('gene-group-panel'); var row = groupPanel.getStore().findExact("id", groupId); groupPanel.getSelectionModel().selectRow(row, false); }
var groupPanel = Ext.getCmp('gene-group-panel'); var row = groupPanel.getStore().findExact("id", groupId); groupPanel.getSelectionModel().selectRow(row, false);
callback : function() { // for selecting the desired row, if given groupid given if (!groupId){ return; } var groupPanel = Ext.getCmp('gene-group-panel'); var row = groupPanel.getStore().findExact("id", groupId); groupPanel.getSelectionModel().selectRow(row, false); }
object.attr("src", scriptUrl + "media/images/vote-accepted.png");
object.attr("src", mediaUrl("media/images/vote-accepted.png"));
var callback_accept = function(object, voteType, data){ if(data.allowed == "0" && data.success == "0"){ showMessage(object, acceptAnonymousMessage); } else if(data.allowed == "-1"){ showMessage(object, acceptOwnAnswerMessage); } else if(data.status == "1"){ ...
$(acceptedButtons).attr("src", scriptUrl + "media/images/vote-accepted.png");
$(acceptedButtons).attr("src", mediaUrl("media/images/vote-accepted.png"));
var callback_accept = function(object, voteType, data){ if(data.allowed == "0" && data.success == "0"){ showMessage(object, acceptAnonymousMessage); } else if(data.allowed == "-1"){ showMessage(object, acceptOwnAnswerMessage); } else if(data.status == "1"){ ...
object.attr("src", scriptUrl + "media/images/vote-accepted-on.png");
object.attr("src", mediaUrl("media/images/vote-accepted-on.png"));
var callback_accept = function(object, voteType, data){ if(data.allowed == "0" && data.success == "0"){ showMessage(object, acceptAnonymousMessage); } else if(data.allowed == "-1"){ showMessage(object, acceptOwnAnswerMessage); } else if(data.status == "1"){ ...
if(data.count == 0)
if(data.count === 0){
var callback_favorite = function(object, voteType, data){ if(data.allowed == "0" && data.success == "0"){ showMessage(object, favoriteAnonymousMessage.replace("{{QuestionID}}", questionId)); } else if(data.status == "1"){ object.attr("src", scriptUrl + "content/images/vote...
}
var callback_favorite = function(object, voteType, data){ if(data.allowed == "0" && data.success == "0"){ showMessage(object, favoriteAnonymousMessage.replace("{{QuestionID}}", questionId)); } else if(data.status == "1"){ object.attr("src", scriptUrl + "content/images/vote...
object.attr("src", scriptUrl + "media/images/vote-favorite-off.png");
object.attr("src", mediaUrl("media/images/vote-favorite-off.png"));
var callback_favorite = function(object, voteType, data){ if(data.allowed == "0" && data.success == "0"){ showMessage(object, favoriteAnonymousMessage.replace("{{QuestionID}}", questionId)); } else if(data.status == "1"){ object.attr("src", scriptUrl + "media/images/vote-f...
object.attr("src", scriptUrl + "media/images/vote-favorite-on.png");
object.attr("src", mediaUrl("media/images/vote-favorite-on.png"));
var callback_favorite = function(object, voteType, data){ if(data.allowed == "0" && data.success == "0"){ showMessage(object, favoriteAnonymousMessage.replace("{{QuestionID}}", questionId)); } else if(data.status == "1"){ object.attr("src", scriptUrl + "media/images/vote-f...
if (data.message.length > 0){
if (data.message && data.message.length > 0){
var callback_vote = function(object, voteType, data){ if (data.success == '0'){ showMessage(object, data.message); return; } else { if (data.status == '1'){ setVoteImage(voteType, true, object); } else { setVot...
return function() { before_func.apply(null, arguments); new_func.apply(null, arguments);
return function() { before_func.apply(null, arguments); new_func.apply(null, arguments); };
var callboth = function(before_func, new_func) { return function() { before_func.apply(null, arguments); new_func.apply(null, arguments); }; };
};
var callboth = function(before_func, new_func) { return function() { before_func.apply(null, arguments); new_func.apply(null, arguments); }; };
for (var property in options) this.options[property] = options[property];
for (var prop in options) this.options[prop] = options[prop];
callService : function(method, parameters, options) { if (options) { for (var property in options) this.options[property] = options[property]; } try { this.transport = new XMLHttpRequest();} catch(e) { try { this.transport = new ActiveXObject('Msxml2.XMLHTTP'); } catch(e) { try { this.transport = new ...
try { this.transport = new XMLHttpRequest();}
try { this.xhr = new XMLHttpRequest();}
callService : function(method, parameters, options) { if (options) { for (var property in options) this.options[property] = options[property]; } try { this.transport = new XMLHttpRequest();} catch(e) { try { this.transport = new ActiveXObject('Msxml2.XMLHTTP'); } catch(e) { try { this.transport = new ...