repo_id stringclasses 409
values | prefix large_stringlengths 34 36.3k | target large_stringlengths 1 498 | assertion_type stringclasses 31
values | difficulty stringclasses 8
values | test_file stringlengths 10 121 | test_function stringlengths 1 104 | test_class stringlengths 0 51 | lineno int32 2 11.3k | commit_idx int32 |
|---|---|---|---|---|---|---|---|---|---|
pyranges/pyranges | from io import StringIO
import numpy as np
import pandas as pd
import pytest
import pyranges as pr
def string_to_df(c):
return pd.read_csv(
StringIO(c),
sep=r"\s+",
dtype={
"Chromosome": "category",
"Start": np.int32,
"End": np.int32,
"Start... | result_k_nearest_first2) | assert_* | variable | tests/unit/k_nearest.py | test_k_nearest_first | 151 | null | |
pyranges/pyranges | import pickle
from pandas.testing import assert_frame_equal
import pyranges as pr
def test_pickle():
gr = pr.data.f1()
pickle.dump(gr, open("hi", "wb+"))
gr2 = pickle.load(open("hi", "rb"))
assert_frame_equal(gr.df, | gr2.df) | assert_* | complex_expr | tests/unit/test_pickle.py | test_pickle | 12 | null | |
pyranges/pyranges | from pandas.testing import assert_series_equal
import pyranges as pr
def test_join_without_reordering():
f1 = pr.from_dict(
{
"Chromosome": ["chr1", "chr1", "chr1"],
"Start": [3, 8, 5],
"End": [6, 9, 7],
"Name": ["interval1", "interval3", "interval2"],
... | ["-1", "-1", "b", "a"] | assert | collection | tests/unit/join/test_join.py | test_join_without_reordering | 36 | null | |
pyranges/pyranges | import pandas as pd
import pyranges as pr
by_to_id = {"gene": "gene_id", "transcript": "transcript_id"}
def compute_introns_single(df, by):
id_column = by_to_id[by]
df = df.sort_values("Start End".split())
g = df[df.Feature == by]
x = pr.PyRanges(df[df.Feature == "exon"]).merge(by=id_column, strand=F... | list(actual.Start) | assert | func_call | tests/unit/test_genomicfeatures.py | test_introns_single | 114 | null | |
pyranges/pyranges | from pandas.testing import assert_series_equal
import pyranges as pr
def test_join_without_reordering():
f1 = pr.from_dict(
{
"Chromosome": ["chr1", "chr1", "chr1"],
"Start": [3, 8, 5],
"End": [6, 9, 7],
"Name": ["interval1", "interval3", "interval2"],
... | ["interval1", "interval3", "interval2", "-1"] | assert | collection | tests/unit/join/test_join.py | test_join_without_reordering | 35 | null | |
pyranges/pyranges | import os
import numpy as np
import pandas as pd
from natsort import natsorted # type: ignore
import pyranges as pr
ray = None
def get_n_args(f):
import inspect
nparams = len(inspect.signature(f).parameters)
return nparams
def call_f(f, nparams, df, odf, kwargs):
if nparams == 3:
return f... | ["same", "opposite", False, None] | assert | collection | pyranges/multithreaded.py | pyrange_apply | 204 | null | |
pyranges/pyranges | import numpy as np
import pyranges as pr
from tests.helpers import assert_df_equal
a = """Chromosome Start End Strand
chr1 6 12 +
chr1 10 20 +
chr1 22 27 -
chr1 24 30 -"""
b = """Chromosome Start End Strand
chr1 12 32 +
chr1 14 30 +"""
c = """Chromosome Start End Strand
chr1 8 ... | expected_result.df) | assert_* | complex_expr | tests/unit/test_count_overlaps.py | test_strand_vs_strand_same | 45 | null | |
pyranges/pyranges | import pandas as pd
import pyranges as pr
by_to_id = {"gene": "gene_id", "transcript": "transcript_id"}
def compute_introns_single(df, by):
id_column = by_to_id[by]
df = df.sort_values("Start End".split())
g = df[df.Feature == by]
x = pr.PyRanges(df[df.Feature == "exon"]).merge(by=id_column, strand=F... | list(expected.End) | assert | func_call | tests/unit/test_genomicfeatures.py | _introns_correct | 85 | null | |
pyranges/pyranges | import pyranges as pr
def assert_equal_length_before_after(gr1, gr2):
print("in test")
l1 = len(gr1)
l2 = len(gr2)
c = pr.concat([gr1, gr2])
if not gr1.stranded or not gr2.stranded:
assert not c.stranded
lc = len(c)
assert l1 + l2 == lc
def test_concat_unstranded_unstranded(f1, f... | f2.unstrand()) | assert_* | func_call | tests/unit/test_concat.py | test_concat_unstranded_unstranded | 24 | null | |
pyranges/pyranges | import numpy as np
import pyranges as pr
np.random.seed(0)
def test_stranded():
cpg = pr.data.cpg()
exons = pr.data.exons()
j = cpg.join(exons)
assert j.stranded
j.Strand = "."
assert not j.stranded
j.Strand = np.random.choice("+ -".split(), size=len(j))
assert j.stranded
f... | 1 | assert | numeric_literal | tests/unit/test_stranded.py | test_stranded | 25 | null | |
pyranges/pyranges | import numpy as np
from pandas.testing import assert_frame_equal
import pyranges as pr
ensembl_gtf = "tests/unit/test_data/ensembl.gtf"
def test_read_gtf():
gr = pr.read_gtf(ensembl_gtf, full=True)
assert len(gr.columns) == 26
df = gr.df
transcript = df.iloc[1]
assert transcript["tag"] == | "basic" | assert | string_literal | tests/unit/test_io.py | test_read_gtf | 16 | null | |
pyranges/pyranges | from io import StringIO
import numpy as np
import pandas as pd
import pytest
import pyranges as pr
def string_to_df(c):
return pd.read_csv(
StringIO(c),
sep=r"\s+",
dtype={
"Chromosome": "category",
"Start": np.int32,
"End": np.int32,
"Start... | result_k_nearest_different) | assert_* | variable | tests/unit/k_nearest.py | test_k_nearest_different | 80 | null | |
pyranges/pyranges | import subprocess # nosec
import tempfile
from io import StringIO
import numpy as np
import pandas as pd
import pytest
from hypothesis import reproduce_failure # noqa: F401
from hypothesis import HealthCheck, given, settings
from natsort import natsorted # type: ignore
import pyranges as pr
from tests.helpers impo... | expected.drop("Cluster", axis=1)) | assert_* | func_call | tests/property_based/test_unary.py | test_cluster_by | 199 | null | |
pyranges/pyranges | from itertools import product
import numpy as np
import pytest
from hypothesis import HealthCheck, given, settings
from tests.property_based.hypothesis_helper import deadline, dfs_no_min, max_examples
strandedness = [False, "same", "opposite"]
binary_methods = [
"set_union",
"set_intersect",
"overlap",
... | np.int64 | assert | complex_expr | tests/property_based/test_do_not_error.py | test_three_in_a_row | 61 | null | |
pyranges/pyranges | import subprocess # nosec
import tempfile
from io import StringIO
import numpy as np
import pandas as pd
import pytest
from hypothesis import reproduce_failure # noqa: F401
from hypothesis import HealthCheck, given, settings
from natsort import natsorted # type: ignore
import pyranges as pr
from tests.helpers impo... | result.df.empty | assert | complex_expr | tests/property_based/test_unary.py | test_merge | 88 | null | |
pyranges/pyranges | from io import StringIO
import pandas as pd
import pytest
import pyranges as pr
def expected_result():
c = """Chromosome Start End Name Score Strand
0 chr1 0 10 interval1 0 +
1 chr1 0 10 interval3 0 +
2 chr1 0 10 interval2 0 -"""
... | [10200, 10400, 51400, 51600, 51800] | assert | collection | tests/unit/windows/test_windows.py | test_windows2 | 55 | null | |
pyranges/pyranges | import subprocess # nosec
import tempfile
from io import StringIO
import numpy as np
import pandas as pd
import pytest
from hypothesis import reproduce_failure # noqa: F401
from hypothesis import HealthCheck, given, settings
from natsort import natsorted # type: ignore
import pyranges as pr
from tests.helpers impo... | expected) | assert_* | variable | tests/property_based/test_unary.py | test_merge_by | 224 | null | |
pyranges/pyranges | from io import StringIO
import pandas as pd
import pytest
import pyranges as pr
def expected_result():
c = """Chromosome Start End Name Score Strand
0 chr1 0 10 interval1 0 +
1 chr1 0 10 interval3 0 +
2 chr1 0 10 interval2 0 -"""
... | [2, 4, 8, 4, 6] | assert | collection | tests/unit/windows/test_windows.py | test_windows | 32 | null | |
pyranges/pyranges | import pandas as pd
import pyranges as pr
by_to_id = {"gene": "gene_id", "transcript": "transcript_id"}
def compute_introns_single(df, by):
id_column = by_to_id[by]
df = df.sort_values("Start End".split())
g = df[df.Feature == by]
x = pr.PyRanges(df[df.Feature == "exon"]).merge(by=id_column, strand=F... | list(actual.End) | assert | func_call | tests/unit/test_genomicfeatures.py | test_introns_single | 115 | null | |
pyranges/pyranges | from io import StringIO
import numpy as np
import pandas as pd
import pytest
import pyranges as pr
def string_to_df(c):
return pd.read_csv(
StringIO(c),
sep=r"\s+",
dtype={
"Chromosome": "category",
"Start": np.int32,
"End": np.int32,
"Start... | result_k_nearest_last2) | assert_* | variable | tests/unit/k_nearest.py | test_k_nearest_last | 211 | null | |
pyranges/pyranges | from io import StringIO
import pandas as pd
import pytest
import pyranges as pr
def expected_result():
c = """Chromosome Start End Name Score Strand
0 chr1 0 10 interval1 0 +
1 chr1 0 10 interval3 0 +
2 chr1 0 10 interval2 0 -"""
... | [4, 6, 10, 6, 8] | assert | collection | tests/unit/windows/test_windows.py | test_windows | 33 | null | |
pyranges/pyranges | import numpy as np
from pandas.testing import assert_frame_equal
import pyranges as pr
ensembl_gtf = "tests/unit/test_data/ensembl.gtf"
def test_read_gtf():
gr = pr.read_gtf(ensembl_gtf, full=True)
assert len(gr.columns) == | 26 | assert | numeric_literal | tests/unit/test_io.py | test_read_gtf | 12 | null | |
pyranges/pyranges | import pandas as pd
import pyranges as pr
by_to_id = {"gene": "gene_id", "transcript": "transcript_id"}
def compute_introns_single(df, by):
id_column = by_to_id[by]
df = df.sort_values("Start End".split())
g = df[df.Feature == by]
x = pr.PyRanges(df[df.Feature == "exon"]).merge(by=id_column, strand=F... | list(expected.Start) | assert | func_call | tests/unit/test_genomicfeatures.py | _introns_correct | 84 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
from snake.solver import PathSolver
def test_shortest():
m = Map(7, 7)
m.create_food(Pos(5, 5))
s = Snake(
m,
Direc.RIGHT,
[Pos(2, 3), Pos(2, 2), Pos(2, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
... | 5 | assert | numeric_literal | tests/solver/test_path.py | test_shortest | 21 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_init():
m = Map(5, 5)
s = Snake(
m,
Direc.RIGHT,
[Pos(1, 3), Pos(1, 2), Pos(1, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
)
assert not s.dead
assert s.direc is Direc.RIGHT
ass... | Pos(1, 2) | assert | func_call | tests/base/test_snake.py | test_init | 16 | null | |
chuyangliu/snake | import numpy as np
import pytest
from snake.util.sumtree import SumTree
def test_sumtree():
tree = SumTree(8)
data = (
("a", 3),
("b", 10),
("c", 12),
("d", 4),
("e", 1),
("f", 2),
("g", 8),
("h", 2),
)
for dat in data:
tree.inser... | 1 | assert | numeric_literal | tests/util/test_sumtree.py | test_sumtree | 24 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
from snake.solver import PathSolver
def test_shortest():
m = Map(7, 7)
m.create_food(Pos(5, 5))
s = Snake(
m,
Direc.RIGHT,
[Pos(2, 3), Pos(2, 2), Pos(2, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
... | expect_path[i] | assert | complex_expr | tests/solver/test_path.py | test_shortest | 20 | null | |
chuyangliu/snake | import pytest
from snake.base import Map, PointType, Pos
def test_init():
with pytest.raises( | TypeError) | pytest.raises | variable | tests/base/test_map.py | test_init | 7 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_move_eat():
m = Map(5, 5)
s = Snake(
m, Direc.RIGHT, [Pos(1, 2), Pos(1, 1)], [PointType.HEAD_R, PointType.BODY_HOR]
)
assert s.len() == 2
m.create_food(Pos(1, 3))
assert m.has_food()
s.move(Direc.RIGHT)
assert not... | PointType.HEAD_L | assert | complex_expr | tests/base/test_snake.py | test_move_eat | 46 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_move_eat():
m = Map(5, 5)
s = Snake(
m, Direc.RIGHT, [Pos(1, 2), Pos(1, 1)], [PointType.HEAD_R, PointType.BODY_HOR]
)
assert s.len() == 2
m.create_food(Pos(1, 3))
assert m.has_food()
s.move(Direc.RIGHT)
assert not... | PointType.HEAD_R | assert | complex_expr | tests/base/test_snake.py | test_move_eat | 36 | null | |
chuyangliu/snake | import pytest
from snake.base import Map, PointType, Pos
def test_copy():
m = Map(5, 5)
m.point(Pos(1, 1)).type = PointType.FOOD
m_copy = m.copy()
assert id(m) != | id(m_copy) | assert | func_call | tests/base/test_map.py | test_copy | 24 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_move_eat():
m = Map(5, 5)
s = Snake(
m, Direc.RIGHT, [Pos(1, 2), Pos(1, 1)], [PointType.HEAD_R, PointType.BODY_HOR]
)
assert s.len() == 2
m.create_food(Pos(1, 3))
assert m.has_food()
s.move(Direc.RIGHT)
assert not... | PointType.HEAD_D | assert | complex_expr | tests/base/test_snake.py | test_move_eat | 41 | null | |
chuyangliu/snake | import numpy as np
import pytest
from snake.util.sumtree import SumTree
def test_sumtree():
tree = SumTree(8)
data = (
("a", 3),
("b", 10),
("c", 12),
("d", 4),
("e", 1),
("f", 2),
("g", 8),
("h", 2),
)
for dat in data:
tree.inser... | 2 | assert | numeric_literal | tests/util/test_sumtree.py | test_sumtree | 62 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_copy():
m = Map(5, 5)
s = Snake(
m,
Direc.RIGHT,
[Pos(1, 3), Pos(1, 2), Pos(1, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
)
s.move(Direc.DOWN)
s.move(Direc.LEFT)
s_copy, _ = s... | s_copy.bodies[i] | assert | complex_expr | tests/base/test_snake.py | test_copy | 203 | null | |
chuyangliu/snake | import pytest
from snake.base import Map, PointType, Pos
def test_copy():
m = Map(5, 5)
m.point(Pos(1, 1)).type = PointType.FOOD
m_copy = m.copy()
assert id(m) != id(m_copy)
assert m.num_rows == | m_copy.num_rows | assert | complex_expr | tests/base/test_map.py | test_copy | 25 | null | |
chuyangliu/snake | import pytest
from snake.base import Map, PointType, Pos
def test_food():
m = Map(5, 5)
assert not m.has_food()
m.create_food(Pos(1, 1))
assert m.has_food()
m.rm_food()
assert not m.has_food()
food = m.create_rand_food()
assert m.has_food()
assert m.point(food).type == PointType.FO... | PointType.EMPTY | assert | complex_expr | tests/base/test_map.py | test_food | 73 | null | |
chuyangliu/snake | from snake.base import Direc
def test_opposite():
assert Direc.opposite(Direc.UP) == Direc.DOWN
assert Direc.opposite(Direc.DOWN) == Direc.UP
assert Direc.opposite(Direc.LEFT) == Direc.RIGHT
assert Direc.opposite(Direc.RIGHT) == | Direc.LEFT | assert | complex_expr | tests/base/test_direc.py | test_opposite | 8 | null | |
chuyangliu/snake | import pytest
from snake.base import Map, PointType, Pos
def test_copy():
m = Map(5, 5)
m.point(Pos(1, 1)).type = PointType.FOOD
m_copy = m.copy()
assert id(m) != id(m_copy)
assert m.num_rows == m_copy.num_rows
assert m.num_cols == m_copy.num_cols
assert m.capacity == | m_copy.capacity | assert | complex_expr | tests/base/test_map.py | test_copy | 27 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_copy():
m = Map(5, 5)
s = Snake(
m,
Direc.RIGHT,
[Pos(1, 3), Pos(1, 2), Pos(1, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
)
s.move(Direc.DOWN)
s.move(Direc.LEFT)
s_copy, _ = s... | id(s_copy) | assert | func_call | tests/base/test_snake.py | test_copy | 197 | null | |
chuyangliu/snake | from snake.base import Direc
def test_opposite():
assert Direc.opposite(Direc.UP) == | Direc.DOWN | assert | complex_expr | tests/base/test_direc.py | test_opposite | 5 | null | |
chuyangliu/snake | import numpy as np
import pytest
from snake.util.sumtree import SumTree
def test_sumtree():
tree = SumTree(8)
data = (
("a", 3),
("b", 10),
("c", 12),
("d", 4),
("e", 1),
("f", 2),
("g", 8),
("h", 2),
)
for dat in data:
tree.inser... | 42 | assert | numeric_literal | tests/util/test_sumtree.py | test_sumtree | 22 | null | |
chuyangliu/snake | from snake.base import Direc, Pos
def test_adj():
p = Pos(0, 0)
adjs = p.all_adj()
assert len(adjs) == 4
hit = [False] * 4
assert hit.count(False) == 4
for adj in adjs:
if adj == Pos(-1, 0):
assert p.direc_to(adj) == Direc.UP
hit[0] = True
elif adj == Pos... | Direc.DOWN | assert | complex_expr | tests/base/test_pos.py | test_adj | 45 | null | |
chuyangliu/snake | from snake.base import Direc
def test_opposite():
assert Direc.opposite(Direc.UP) == Direc.DOWN
assert Direc.opposite(Direc.DOWN) == | Direc.UP | assert | complex_expr | tests/base/test_direc.py | test_opposite | 6 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_init():
m = Map(5, 5)
s = Snake(
m,
Direc.RIGHT,
[Pos(1, 3), Pos(1, 2), Pos(1, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
)
assert not s.dead
assert s.direc is Direc.RIGHT
ass... | Pos(1, 3) | assert | func_call | tests/base/test_snake.py | test_init | 15 | null | |
chuyangliu/snake | import pytest
from snake.base import Map, PointType, Pos
def test_food():
m = Map(5, 5)
assert not m.has_food()
m.create_food(Pos(1, 1))
assert m.has_food()
m.rm_food()
assert not m.has_food()
food = m.create_rand_food()
assert m.has_food()
assert m.point(food).type == | PointType.FOOD | assert | complex_expr | tests/base/test_map.py | test_food | 69 | null | |
chuyangliu/snake | from snake.base import Direc, Pos
def test_dist():
p1 = Pos(-5, 20)
p2 = Pos(10, 8)
assert Pos.manhattan_dist(p1, p2) == | 27 | assert | numeric_literal | tests/base/test_pos.py | test_dist | 31 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
from snake.solver import HamiltonSolver
def test_cycle():
m = Map(6, 6)
s = Snake(
m, Direc.RIGHT, [Pos(1, 2), Pos(1, 1)], [PointType.HEAD_R, PointType.BODY_HOR]
)
solver = HamiltonSolver(s, False)
table = solver.table
cnt = 0
... | table[head.x][head.y].idx | assert | complex_expr | tests/solver/test_hamilton.py | test_cycle | 16 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
from snake.solver import PathSolver
def test_shortest():
m = Map(7, 7)
m.create_food(Pos(5, 5))
s = Snake(
m,
Direc.RIGHT,
[Pos(2, 3), Pos(2, 2), Pos(2, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
... | solver.table[5][5].dist | assert | complex_expr | tests/solver/test_path.py | test_shortest | 22 | null | |
chuyangliu/snake | import numpy as np
import pytest
from snake.util.sumtree import SumTree
def test_sumtree():
tree = SumTree(8)
data = (
("a", 3),
("b", 10),
("c", 12),
("d", 4),
("e", 1),
("f", 2),
("g", 8),
("h", 2),
)
for dat in data:
tree.inser... | 20 | assert | numeric_literal | tests/util/test_sumtree.py | test_sumtree | 61 | null | |
chuyangliu/snake | from snake.base import Direc, Pos
def test_init():
p = Pos(-5, 5)
assert p == | Pos(-5, 5) | assert | func_call | tests/base/test_pos.py | test_init | 6 | null | |
chuyangliu/snake | from snake.base import Direc, Pos
def test_arithmetic():
p1 = Pos(-5, 10)
p2 = Pos(5, -10)
p3 = p1 + p2
p4 = p1 - p2
p5 = p2 - p1
assert p3 == Pos(0, 0)
assert p3 - p1 == | p2 | assert | variable | tests/base/test_pos.py | test_arithmetic | 20 | null | |
chuyangliu/snake | import pytest
from snake.base import Map, PointType, Pos
def test_copy():
m = Map(5, 5)
m.point(Pos(1, 1)).type = PointType.FOOD
m_copy = m.copy()
assert id(m) != id(m_copy)
assert m.num_rows == m_copy.num_rows
assert m.num_cols == | m_copy.num_cols | assert | complex_expr | tests/base/test_map.py | test_copy | 26 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
from snake.solver import PathSolver
def test_shortest():
m = Map(7, 7)
m.create_food(Pos(5, 5))
s = Snake(
m,
Direc.RIGHT,
[Pos(2, 3), Pos(2, 2), Pos(2, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
... | len(expect_path) | assert | func_call | tests/solver/test_path.py | test_shortest | 18 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_move_eat():
m = Map(5, 5)
s = Snake(
m, Direc.RIGHT, [Pos(1, 2), Pos(1, 1)], [PointType.HEAD_R, PointType.BODY_HOR]
)
assert s.len() == | 2 | assert | numeric_literal | tests/base/test_snake.py | test_move_eat | 28 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
from snake.solver import PathSolver
def test_longest():
m = Map(6, 6)
m.create_food(Pos(4, 4))
s = Snake(
m,
Direc.RIGHT,
[Pos(1, 3), Pos(1, 2), Pos(1, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
... | PointType.BODY_HOR | assert | complex_expr | tests/solver/test_path.py | test_longest | 55 | null | |
chuyangliu/snake | import pytest
from snake.base import Map, PointType, Pos
def test_init():
with pytest.raises(TypeError):
m = Map(5, 1.5)
with pytest.raises( | ValueError) | pytest.raises | variable | tests/base/test_map.py | test_init | 9 | null | |
chuyangliu/snake | from snake.base import Point, PointType
def test_init():
p = Point()
assert p.type == PointType.EMPTY
p.type = PointType.FOOD
assert p.type == | PointType.FOOD | assert | complex_expr | tests/base/test_point.py | test_init | 8 | null | |
chuyangliu/snake | from snake.base import Direc, Pos
def test_adj():
p = Pos(0, 0)
adjs = p.all_adj()
assert len(adjs) == 4
hit = [False] * 4
assert hit.count(False) == 4
for adj in adjs:
if adj == Pos(-1, 0):
assert p.direc_to(adj) == Direc.UP
hit[0] = True
elif adj == Pos... | 0 | assert | numeric_literal | tests/base/test_pos.py | test_adj | 55 | null | |
chuyangliu/snake | from snake.base import Direc, Pos
def test_adj():
p = Pos(0, 0)
adjs = p.all_adj()
assert len(adjs) == | 4 | assert | numeric_literal | tests/base/test_pos.py | test_adj | 37 | null | |
chuyangliu/snake | import numpy as np
import pytest
from snake.util.sumtree import SumTree
def test_sumtree():
tree = SumTree(8)
data = (
("a", 3),
("b", 10),
("c", 12),
("d", 4),
("e", 1),
("f", 2),
("g", 8),
("h", 2),
)
for dat in data:
tree.inser... | 12 | assert | numeric_literal | tests/util/test_sumtree.py | test_sumtree | 23 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_init():
m = Map(5, 5)
s = Snake(
m,
Direc.RIGHT,
[Pos(1, 3), Pos(1, 2), Pos(1, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
)
assert not s.dead
assert s.direc is | Direc.RIGHT | assert | complex_expr | tests/base/test_snake.py | test_init | 13 | null | |
chuyangliu/snake | from snake.base import Direc, Map, PointType, Pos, Snake
def test_init():
m = Map(5, 5)
s = Snake(
m,
Direc.RIGHT,
[Pos(1, 3), Pos(1, 2), Pos(1, 1)],
[PointType.HEAD_R, PointType.BODY_HOR, PointType.BODY_HOR],
)
assert not s.dead
assert s.direc is Direc.RIGHT
ass... | Pos(1, 1) | assert | func_call | tests/base/test_snake.py | test_init | 17 | null | |
nipunsadvilkar/pySBD | import pytest
from pysbd.languages import LANGUAGE_CODES, Language
def test_lang_code2instance_mapping():
for code, language_module in LANGUAGE_CODES.items():
assert Language.get_language_code(code) == | language_module | assert | variable | tests/test_languages.py | test_lang_code2instance_mapping | 7 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
def test_segmenter_doesnt_mutate_input(pysbd_default_en_no_clean_no_span_fixture,
text='My name is Jonas E. Smith. Please turn to p. 55.'):
segments = pysbd_default_en_no_clean_no_span_fixture.segment(text)
segme... | 'My name is Jonas E. Smith. Please turn to p. 55.' | assert | string_literal | tests/test_segmenter.py | test_segmenter_doesnt_mutate_input | 22 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_AR_RULES_TEST_CASES = [
("سؤال وجواب: ماذا حدث بعد الانتخابات الايرانية؟ طرح الكثير من التساؤلات غداة ظهور نتائج الانتخابات الرئاسية الايرانية التي أججت مظاهرات واسعة واعمال عنف بين المحتجين على النتائج ورجال الامن. يقول معارضو الرئيس الإيراني إن الطريقة التي اعلنت بها النتائج كانت مثيرة للاست... | expected_sents | assert | variable | tests/lang/test_arabic.py | test_ar_sbd | 24 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
def test_exception_with_doc_type_pdf_and_clean_false():
"""
Test to force clean=True when doc_type="pdf"
"""
with pytest.raises(ValueError) as e:
seg = pysbd.Segmenter(language="en", clean=False, doc_type='pdf')
assert str(e.value... | "`doc_type='pdf'` should have `clean=True` & " "`char_span` should be False since original" "text will be modified." | assert | string_literal | tests/test_segmenter.py | test_exception_with_doc_type_pdf_and_clean_false | 80 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_NL_RULES_TEST_CASES = [
("Hij schoot op de JP8-brandstof toen de Surface-to-Air (sam)-missiles op hem af kwamen. 81 procent van de schoten was raak.",
["Hij schoot op de JP8-brandstof toen de Surface-to-Air (sam)-missiles op hem af kwamen.", "81 procent van de schoten was raak."]),
("... | expected_sents | assert | variable | tests/lang/test_dutch.py | test_nl_sbd | 17 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_EN_RULES_TEST_CASES = [
("Hello World. My name is Jonas.", ["Hello World.", "My name is Jonas."]),
("What is your name? My name is Jonas.", ["What is your name?", "My name is Jonas."]),
("There it is! I found it.", ["There it is!", "I found it."]),
("My name is Jonas E. Smith.", ["... | expected_sents | assert | variable | tests/lang/test_english.py | test_en_sbd | 170 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_UR_RULES_TEST_CASES = [
("کیا حال ہے؟ ميرا نام ___ ەے۔ میں حالا تاوان دےدوں؟",
["کیا حال ہے؟", "ميرا نام ___ ەے۔", "میں حالا تاوان دےدوں؟"]),
]
@pytest.mark.parametrize('text,expected_sents', GOLDEN_UR_RULES_TEST_CASES)
def test_ur_sbd(ur_default_fixture, text, expected_sents):
"""Urdu langu... | expected_sents | assert | variable | tests/lang/test_urdu.py | test_ur_sbd | 14 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_HY_RULES_TEST_CASES = [
("Ի՞նչ ես մտածում: Ոչինչ:",
["Ի՞նչ ես մտածում:", "Ոչինչ:"]),
("Ապրիլի 24-ին սկսեց անձրևել...Այդպես էի գիտեի:",
["Ապրիլի 24-ին սկսեց անձրևել...Այդպես էի գիտեի:"]),
("Այսպիսով` մոտենում ենք ավարտին: Տրամաբանությյունը հետևյալն է. պարզություն և աշխատանք:... | expected_sents | assert | variable | tests/lang/test_armenian.py | test_hy_sbd | 87 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_SK_RULES_TEST_CASES = [
("Ide o majiteľov firmy ABTrade s. r. o., ktorí stoja aj za ďalšími spoločnosťami, napr. XYZCorp a.s.",
["Ide o majiteľov firmy ABTrade s. r. o., ktorí stoja aj za ďalšími spoločnosťami, napr. XYZCorp a.s."]),
("„Prieskumy beriem na ľahkú váhu. V podstate ma to... | expected_sents | assert | variable | tests/lang/test_slovak.py | test_pl_sbd | 23 | null | |
nipunsadvilkar/pySBD | import pytest
from pysbd.cleaner import Cleaner
from pysbd.languages import Language
TEST_TOBE_CLEANED_DATA = [
("It was a cold \nnight in the city.", "It was a cold night in the city."),
("This is the U.S. Senate my friends. <em>Yes.</em> <em>It is</em>!",
"This is the U.S. Senate my friends. Yes. It is!"... | "It was a cold \nnight in the city." | assert | string_literal | tests/test_cleaner.py | test_cleaner_doesnt_mutate_input | 19 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
def test_same_sentence_different_char_span(en_no_clean_with_span_fixture):
"""Test same sentences with different char offsets & check for non-destruction"""
text = """From the AP comes this story :
President Bush on Tuesday nominated two individuals t... | "".join([seg.sent for seg in segments_w_spans]) | assert | string_literal | tests/test_segmenter.py | test_same_sentence_different_char_span | 64 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_PL_RULES_TEST_CASES = [
("To słowo bałt. jestskrótem.",
["To słowo bałt. jestskrótem."]),
]
@pytest.mark.parametrize('text,expected_sents', GOLDEN_PL_RULES_TEST_CASES)
def test_pl_sbd(pl_default_fixture, text, expected_sents):
"""Polish language SBD tests"""
segments = pl_default_fixture... | expected_sents | assert | variable | tests/lang/test_polish.py | test_pl_sbd | 14 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_HI_RULES_TEST_CASES = [
("सच्चाई यह है कि इसे कोई नहीं जानता। हो सकता है यह फ़्रेन्को के खिलाफ़ कोई विद्रोह रहा हो, या फिर बेकाबू हो गया कोई आनंदोत्सव।",
["सच्चाई यह है कि इसे कोई नहीं जानता।", "हो सकता है यह फ़्रेन्को के खिलाफ़ कोई विद्रोह रहा हो, या फिर बेकाबू हो गया कोई आनंदोत्सव।"])
]
... | expected_sents | assert | variable | tests/lang/test_hindi.py | test_hi_sbd | 14 | null | |
nipunsadvilkar/pySBD | import pytest
from pysbd.languages import LANGUAGE_CODES, Language
def test_exception_on_no_lang_code_provided():
with pytest.raises(ValueError) as e:
Language.get_language_code('')
assert "Provide valid language ID i.e. ISO code." in | str(e.value) | assert | func_call | tests/test_languages.py | test_exception_on_no_lang_code_provided | 12 | null | |
nipunsadvilkar/pySBD | import pytest
from pysbd.cleaner import Cleaner
from pysbd.languages import Language
TEST_TOBE_CLEANED_DATA = [
("It was a cold \nnight in the city.", "It was a cold night in the city."),
("This is the U.S. Senate my friends. <em>Yes.</em> <em>It is</em>!",
"This is the U.S. Senate my friends. Yes. It is!"... | expected_cleaned_sents | assert | variable | tests/test_cleaner.py | test_cleaner | 15 | null | |
nipunsadvilkar/pySBD | import pytest
from pysbd.cleaner import Cleaner
from pysbd.languages import Language
TEST_TOBE_CLEANED_DATA = [
("It was a cold \nnight in the city.", "It was a cold night in the city."),
("This is the U.S. Senate my friends. <em>Yes.</em> <em>It is</em>!",
"This is the U.S. Senate my friends. Yes. It is!"... | text | assert | variable | tests/test_cleaner.py | test_cleaner_none_input | 23 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_RU_RULES_TEST_CASES = [
("Объем составляет 5 куб.м.",
["Объем составляет 5 куб.м."]),
("Маленькая девочка бежала и кричала: «Не видали маму?».",
["Маленькая девочка бежала и кричала: «Не видали маму?»."]),
("Сегодня 27.10.14", ["Сегодня 27.10.14"])
]
RU_MORE_TEST_CASES = [("Маленькая девочка бе... | expected_sents | assert | variable | tests/lang/test_russian.py | test_ru_sbd | 97 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_KK_RULES_TEST_CASES = [
("Мұхитқа тікелей шыға алмайтын мемлекеттердің ішінде Қазақстан - ең үлкені.",
["Мұхитқа тікелей шыға алмайтын мемлекеттердің ішінде Қазақстан - ең үлкені."]),
("Оқушылар үйі, Достық даңғылы, Абай даналығы, ауыл шаруашылығы – кім? не?",
["Оқушылар үйі, Достық даңғылы, Аба... | expected_sents | assert | variable | tests/lang/test_kazakh.py | test_kk_sbd | 40 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_FA_RULES_TEST_CASES = [
("خوشبختم، آقای رضا. شما کجایی هستید؟ من از تهران هستم.",
["خوشبختم، آقای رضا.", "شما کجایی هستید؟", "من از تهران هستم."])
]
@pytest.mark.parametrize('text,expected_sents', GOLDEN_FA_RULES_TEST_CASES)
def test_fa_sbd(fa_default_fixture, text, expected_sents):
... | expected_sents | assert | variable | tests/lang/test_persian.py | test_fa_sbd | 15 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_ZH_RULES_TEST_CASES = [
("安永已聯繫周怡安親屬，協助辦理簽證相關事宜，周怡安家屬1月1日晚間搭乘東方航空班機抵達上海，他們步入入境大廳時神情落寞、不發一語。周怡安來自台中，去年剛從元智大學畢業，同年9月加入安永。",
["安永已聯繫周怡安親屬，協助辦理簽證相關事宜，周怡安家屬1月1日晚間搭乘東方航空班機抵達上海，他們步入入境大廳時神情落寞、不發一語。", "周怡安來自台中，去年剛從元智大學畢業，同年9月加入安永。"]),
("我们明天一起去看《摔跤吧！爸爸》好吗？好！",
["我们明天一起去看《摔跤吧！爸爸》好吗？", "好！"... | expected_sents | assert | variable | tests/lang/test_chinese.py | test_zsh_sbd | 16 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
GOLDEN_ES_RULES_TEST_CASES = [
("¿Cómo está hoy? Espero que muy bien.",
["¿Cómo está hoy?", "Espero que muy bien."]),
("¡Hola señorita! Espero que muy bien.",
["¡Hola señorita!", "Espero que muy bien."]),
("Hola Srta. Ledesma. Buenos días, soy el Lic. Naser Pastoriza, y... | expected_sents | assert | variable | tests/lang/test_spanish.py | test_es_sbd | 102 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_BG_RULES_TEST_CASES = [
("В първата половина на ноември т.г. ще бъде свикан Консултативният съвет за национална сигурност, обяви държавният глава.",
["В първата половина на ноември т.г. ще бъде свикан Консултативният съвет за национална сигурност, обяви държавният глава."]),
("Компютърът е устрой... | expected_sents | assert | variable | tests/lang/test_bulgarian.py | test_bg_sbd | 20 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
@pytest.mark.parametrize('text,expected',
[('My name is Jonas E. Smith. Please turn to p. 55.',
[
('My name is Jonas E. Smith. ', 0, 27),
('Pl... | "".join([seg.sent for seg in segments]) | assert | string_literal | tests/test_segmenter.py | test_sbd_char_span | 38 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
def test_no_input(pysbd_default_en_no_clean_no_span_fixture, text=""):
segments = pysbd_default_en_no_clean_no_span_fixture.segment(text)
assert segments == | [] | assert | collection | tests/test_segmenter.py | test_no_input | 8 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
@pytest.mark.parametrize('text,expected',
[('My name is Jonas E. Smith. Please turn to p. 55.',
[
('My name is Jonas E. Smith. ', 0, 27),
('Pl... | expected_text_spans | assert | variable | tests/test_segmenter.py | test_sbd_char_span | 36 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
TEST_ISSUE_DATA = [
('#27', "This new form of generalized PDF in (9) is generic and suitable for all the fading models presented in Table I withbranches MRC reception. In section III, (9) will be used in the derivations of the unified ABER and ACC express... | "".join([seg.sent for seg in segments]) | assert | string_literal | tests/regression/test_issues.py | test_issues_with_char_spans | 97 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
def test_exception_with_both_clean_and_span_true():
"""Test to not allow clean=True and char_span=True
"""
with pytest.raises( | ValueError) | pytest.raises | variable | tests/test_segmenter.py | test_exception_with_both_clean_and_span_true | 69 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_IT_RULES_TEST_CASES = [
("Salve Sig.ra Mengoni! Come sta oggi?",
["Salve Sig.ra Mengoni!", "Come sta oggi?"]),
("Una lettera si può iniziare in questo modo «Il/la sottoscritto/a.».",
["Una lettera si può iniziare in questo modo «Il/la sottoscritto/a.»."]),
("La casa costa 170.500.000,00€!",
["L... | expected_sents | assert | variable | tests/lang/test_italian.py | test_it_sbd | 87 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_EL_RULES_TEST_CASES = [
("Με συγχωρείτε· πού είναι οι τουαλέτες; Τις Κυριακές δε δούλευε κανένας. το κόστος του σπιτιού ήταν £260.950,00.",
["Με συγχωρείτε· πού είναι οι τουαλέτες;", "Τις Κυριακές δε δούλευε κανένας.", "το κόστος του σπιτιού ήταν £260.950,00."]),
]
@pytest.mark.parametrize('text... | expected_sents | assert | variable | tests/lang/test_greek.py | test_el_sbd | 14 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
TEST_ISSUE_DATA = [
('#27', "This new form of generalized PDF in (9) is generic and suitable for all the fading models presented in Table I withbranches MRC reception. In section III, (9) will be used in the derivations of the unified ABER and ACC express... | " ".join(segments) | assert | string_literal | tests/regression/test_issues.py | test_issue | 86 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
TEST_ISSUE_DATA = [
('#27', "This new form of generalized PDF in (9) is generic and suitable for all the fading models presented in Table I withbranches MRC reception. In section III, (9) will be used in the derivations of the unified ABER and ACC express... | expected_sents | assert | variable | tests/regression/test_issues.py | test_issue | 84 | null | |
nipunsadvilkar/pySBD | import pytest
import pysbd
from pysbd.utils import TextSpan
TEST_ISSUE_DATA = [
('#27', "This new form of generalized PDF in (9) is generic and suitable for all the fading models presented in Table I withbranches MRC reception. In section III, (9) will be used in the derivations of the unified ABER and ACC express... | expected_text_spans | assert | variable | tests/regression/test_issues.py | test_issues_with_char_spans | 95 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_MR_RULES_TEST_CASES = [
("आज दसरा आहे. आज खूप शुभ दिवस आहे.",
["आज दसरा आहे.", "आज खूप शुभ दिवस आहे."]),
("ढग खूप गर्जत होते; पण पाऊस पडत नव्हता.",
["ढग खूप गर्जत होते; पण पाऊस पडत नव्हता."]),
("रमाची परीक्षा कधी आहे? अवकाश आहे अजून.",
["रमाची परीक्षा कधी आहे?", "अवकाश आ... | expected_sents | assert | variable | tests/lang/test_marathi.py | test_mr_sbd | 22 | null | |
nipunsadvilkar/pySBD | import pytest
GOLDEN_JA_RULES_TEST_CASES = [
("これはペンです。それはマーカーです。",
["これはペンです。", "それはマーカーです。"]),
("それは何ですか？ペンですか？",
["それは何ですか？", "ペンですか？"]),
("良かったね！すごい！",
["良かったね！", "すごい！"]),
("自民党税制調査会の幹部は、「引き下げ幅は３．２９％以上を目指すことになる」と指摘していて、今後、公明党と合意したうえで、３０日に決定する与党税制改正大綱に盛り込むことにしています。２％台後半を目指すとする方向で最終調整に入りました。",
["自民党税制調査会の幹部は、「引... | expected_sents | assert | variable | tests/lang/test_japanese.py | test_ja_sbd | 20 | null | |
descriptinc/audiotools | import os
import random
import tempfile
import numpy as np
import pytest
import torch
from audiotools import util
from audiotools.core.audio_signal import AudioSignal
def test_sample_dist():
state = util.random_state(0)
v1 = state.uniform(0.0, 1.0)
v2 = util.sample_from_dist(("uniform", 0.0, 1.0), 0)
... | 1.0 | assert | numeric_literal | tests/core/test_util.py | test_sample_dist | 97 | null | |
descriptinc/audiotools | import numpy as np
import pytest
import torch
import torchaudio
import audiotools
from audiotools import AudioSignal
from audiotools import metrics
from audiotools.core import audio_signal
def test_stoi():
audio_path = "tests/audio/spk/f10_script4_produced.wav"
x = AudioSignal.excerpt(audio_path, duration=1,... | loss_val_identity | assert | variable | tests/metrics/test_quality.py | test_stoi | 26 | null | |
descriptinc/audiotools | import os
import random
import tempfile
import numpy as np
import pytest
import torch
from audiotools import util
from audiotools.core.audio_signal import AudioSignal
def test_check_random_state():
# seed is None
rng_type = type(np.random.RandomState(10))
rng = util.random_state(None)
assert type(rng... | ValueError) | pytest.raises | variable | tests/core/test_util.py | test_check_random_state | 29 | null | |
descriptinc/audiotools | import os
import random
import tempfile
import numpy as np
import pytest
import torch
from audiotools import util
from audiotools.core.audio_signal import AudioSignal
def test_whisper_features():
audio_path = "tests/audio/spk/f10_script4_produced.wav"
signal = AudioSignal(audio_path, offset=10, duration=10)
... | torch.float32 | assert | complex_expr | tests/core/test_whisper.py | test_whisper_features | 19 | null |
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