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skimage.feature.corner_fast(image, n=12, threshold=0.15) [source]
Extract FAST corners for a given image. Parameters
image2D ndarray
Input image.
nint, optional
Minimum number of consecutive pixels out of 16 pixels on the circle that should all be either brighter or darker w.r.t testpixel. A point c on the ... | skimage.api.skimage.feature#skimage.feature.corner_fast |
skimage.feature.corner_foerstner(image, sigma=1) [source]
Compute Foerstner corner measure response image. This corner detector uses information from the auto-correlation matrix A: A = [(imx**2) (imx*imy)] = [Axx Axy]
[(imx*imy) (imy**2)] [Axy Ayy]
Where imx and imy are first derivatives, averaged with a g... | skimage.api.skimage.feature#skimage.feature.corner_foerstner |
skimage.feature.corner_harris(image, method='k', k=0.05, eps=1e-06, sigma=1) [source]
Compute Harris corner measure response image. This corner detector uses information from the auto-correlation matrix A: A = [(imx**2) (imx*imy)] = [Axx Axy]
[(imx*imy) (imy**2)] [Axy Ayy]
Where imx and imy are first deriv... | skimage.api.skimage.feature#skimage.feature.corner_harris |
skimage.feature.corner_kitchen_rosenfeld(image, mode='constant', cval=0) [source]
Compute Kitchen and Rosenfeld corner measure response image. The corner measure is calculated as follows: (imxx * imy**2 + imyy * imx**2 - 2 * imxy * imx * imy)
/ (imx**2 + imy**2)
Where imx and imy are the first and imxx, imxy, im... | skimage.api.skimage.feature#skimage.feature.corner_kitchen_rosenfeld |
skimage.feature.corner_moravec(image, window_size=1) [source]
Compute Moravec corner measure response image. This is one of the simplest corner detectors and is comparatively fast but has several limitations (e.g. not rotation invariant). Parameters
imagendarray
Input image.
window_sizeint, optional
Window ... | skimage.api.skimage.feature#skimage.feature.corner_moravec |
skimage.feature.corner_orientations(image, corners, mask) [source]
Compute the orientation of corners. The orientation of corners is computed using the first order central moment i.e. the center of mass approach. The corner orientation is the angle of the vector from the corner coordinate to the intensity centroid in... | skimage.api.skimage.feature#skimage.feature.corner_orientations |
skimage.feature.corner_peaks(image, min_distance=1, threshold_abs=None, threshold_rel=None, exclude_border=True, indices=True, num_peaks=inf, footprint=None, labels=None, *, num_peaks_per_label=inf, p_norm=inf) [source]
Find peaks in corner measure response image. This differs from skimage.feature.peak_local_max in t... | skimage.api.skimage.feature#skimage.feature.corner_peaks |
skimage.feature.corner_shi_tomasi(image, sigma=1) [source]
Compute Shi-Tomasi (Kanade-Tomasi) corner measure response image. This corner detector uses information from the auto-correlation matrix A: A = [(imx**2) (imx*imy)] = [Axx Axy]
[(imx*imy) (imy**2)] [Axy Ayy]
Where imx and imy are first derivatives,... | skimage.api.skimage.feature#skimage.feature.corner_shi_tomasi |
skimage.feature.corner_subpix(image, corners, window_size=11, alpha=0.99) [source]
Determine subpixel position of corners. A statistical test decides whether the corner is defined as the intersection of two edges or a single peak. Depending on the classification result, the subpixel corner location is determined base... | skimage.api.skimage.feature#skimage.feature.corner_subpix |
skimage.feature.daisy(image, step=4, radius=15, rings=3, histograms=8, orientations=8, normalization='l1', sigmas=None, ring_radii=None, visualize=False) [source]
Extract DAISY feature descriptors densely for the given image. DAISY is a feature descriptor similar to SIFT formulated in a way that allows for fast dense... | skimage.api.skimage.feature#skimage.feature.daisy |
skimage.feature.draw_haar_like_feature(image, r, c, width, height, feature_coord, color_positive_block=(1.0, 0.0, 0.0), color_negative_block=(0.0, 1.0, 0.0), alpha=0.5, max_n_features=None, random_state=None) [source]
Visualization of Haar-like features. Parameters
image(M, N) ndarray
The region of an integral ... | skimage.api.skimage.feature#skimage.feature.draw_haar_like_feature |
skimage.feature.draw_multiblock_lbp(image, r, c, width, height, lbp_code=0, color_greater_block=(1, 1, 1), color_less_block=(0, 0.69, 0.96), alpha=0.5) [source]
Multi-block local binary pattern visualization. Blocks with higher sums are colored with alpha-blended white rectangles, whereas blocks with lower sums are c... | skimage.api.skimage.feature#skimage.feature.draw_multiblock_lbp |
skimage.feature.greycomatrix(image, distances, angles, levels=None, symmetric=False, normed=False) [source]
Calculate the grey-level co-occurrence matrix. A grey level co-occurrence matrix is a histogram of co-occurring greyscale values at a given offset over an image. Parameters
imagearray_like
Integer typed i... | skimage.api.skimage.feature#skimage.feature.greycomatrix |
skimage.feature.greycoprops(P, prop='contrast') [source]
Calculate texture properties of a GLCM. Compute a feature of a grey level co-occurrence matrix to serve as a compact summary of the matrix. The properties are computed as follows: ‘contrast’: \(\sum_{i,j=0}^{levels-1} P_{i,j}(i-j)^2\)
‘dissimilarity’: \(\sum_... | skimage.api.skimage.feature#skimage.feature.greycoprops |
skimage.feature.haar_like_feature(int_image, r, c, width, height, feature_type=None, feature_coord=None) [source]
Compute the Haar-like features for a region of interest (ROI) of an integral image. Haar-like features have been successfully used for image classification and object detection [1]. It has been used for r... | skimage.api.skimage.feature#skimage.feature.haar_like_feature |
skimage.feature.haar_like_feature_coord(width, height, feature_type=None) [source]
Compute the coordinates of Haar-like features. Parameters
widthint
Width of the detection window.
heightint
Height of the detection window.
feature_typestr or list of str or None, optional
The type of feature to consider:... | skimage.api.skimage.feature#skimage.feature.haar_like_feature_coord |
skimage.feature.hessian_matrix(image, sigma=1, mode='constant', cval=0, order='rc') [source]
Compute Hessian matrix. The Hessian matrix is defined as: H = [Hrr Hrc]
[Hrc Hcc]
which is computed by convolving the image with the second derivatives of the Gaussian kernel in the respective r- and c-directions. Param... | skimage.api.skimage.feature#skimage.feature.hessian_matrix |
skimage.feature.hessian_matrix_det(image, sigma=1, approximate=True) [source]
Compute the approximate Hessian Determinant over an image. The 2D approximate method uses box filters over integral images to compute the approximate Hessian Determinant, as described in [1]. Parameters
imagearray
The image over which... | skimage.api.skimage.feature#skimage.feature.hessian_matrix_det |
skimage.feature.hessian_matrix_eigvals(H_elems) [source]
Compute eigenvalues of Hessian matrix. Parameters
H_elemslist of ndarray
The upper-diagonal elements of the Hessian matrix, as returned by hessian_matrix. Returns
eigsndarray
The eigenvalues of the Hessian matrix, in decreasing order. The eigenval... | skimage.api.skimage.feature#skimage.feature.hessian_matrix_eigvals |
skimage.feature.hog(image, orientations=9, pixels_per_cell=(8, 8), cells_per_block=(3, 3), block_norm='L2-Hys', visualize=False, transform_sqrt=False, feature_vector=True, multichannel=None) [source]
Extract Histogram of Oriented Gradients (HOG) for a given image. Compute a Histogram of Oriented Gradients (HOG) by (... | skimage.api.skimage.feature#skimage.feature.hog |
skimage.feature.local_binary_pattern(image, P, R, method='default') [source]
Gray scale and rotation invariant LBP (Local Binary Patterns). LBP is an invariant descriptor that can be used for texture classification. Parameters
image(N, M) array
Graylevel image.
Pint
Number of circularly symmetric neighbour ... | skimage.api.skimage.feature#skimage.feature.local_binary_pattern |
skimage.feature.masked_register_translation(src_image, target_image, src_mask, target_mask=None, overlap_ratio=0.3) [source]
Deprecated function. Use skimage.registration.phase_cross_correlation instead. | skimage.api.skimage.feature#skimage.feature.masked_register_translation |
skimage.feature.match_descriptors(descriptors1, descriptors2, metric=None, p=2, max_distance=inf, cross_check=True, max_ratio=1.0) [source]
Brute-force matching of descriptors. For each descriptor in the first set this matcher finds the closest descriptor in the second set (and vice-versa in the case of enabled cross... | skimage.api.skimage.feature#skimage.feature.match_descriptors |
skimage.feature.match_template(image, template, pad_input=False, mode='constant', constant_values=0) [source]
Match a template to a 2-D or 3-D image using normalized correlation. The output is an array with values between -1.0 and 1.0. The value at a given position corresponds to the correlation coefficient between t... | skimage.api.skimage.feature#skimage.feature.match_template |
skimage.feature.multiblock_lbp(int_image, r, c, width, height) [source]
Multi-block local binary pattern (MB-LBP). The features are calculated similarly to local binary patterns (LBPs), (See local_binary_pattern()) except that summed blocks are used instead of individual pixel values. MB-LBP is an extension of LBP th... | skimage.api.skimage.feature#skimage.feature.multiblock_lbp |
skimage.feature.multiscale_basic_features(image, multichannel=False, intensity=True, edges=True, texture=True, sigma_min=0.5, sigma_max=16, num_sigma=None, num_workers=None) [source]
Local features for a single- or multi-channel nd image. Intensity, gradient intensity and local structure are computed at different sca... | skimage.api.skimage.feature#skimage.feature.multiscale_basic_features |
class skimage.feature.ORB(downscale=1.2, n_scales=8, n_keypoints=500, fast_n=9, fast_threshold=0.08, harris_k=0.04) [source]
Bases: skimage.feature.util.FeatureDetector, skimage.feature.util.DescriptorExtractor Oriented FAST and rotated BRIEF feature detector and binary descriptor extractor. Parameters
n_keypoint... | skimage.api.skimage.feature#skimage.feature.ORB |
detect(image) [source]
Detect oriented FAST keypoints along with the corresponding scale. Parameters
image2D array
Input image. | skimage.api.skimage.feature#skimage.feature.ORB.detect |
detect_and_extract(image) [source]
Detect oriented FAST keypoints and extract rBRIEF descriptors. Note that this is faster than first calling detect and then extract. Parameters
image2D array
Input image. | skimage.api.skimage.feature#skimage.feature.ORB.detect_and_extract |
extract(image, keypoints, scales, orientations) [source]
Extract rBRIEF binary descriptors for given keypoints in image. Note that the keypoints must be extracted using the same downscale and n_scales parameters. Additionally, if you want to extract both keypoints and descriptors you should use the faster detect_and_... | skimage.api.skimage.feature#skimage.feature.ORB.extract |
__init__(downscale=1.2, n_scales=8, n_keypoints=500, fast_n=9, fast_threshold=0.08, harris_k=0.04) [source]
Initialize self. See help(type(self)) for accurate signature. | skimage.api.skimage.feature#skimage.feature.ORB.__init__ |
skimage.feature.peak_local_max(image, min_distance=1, threshold_abs=None, threshold_rel=None, exclude_border=True, indices=True, num_peaks=inf, footprint=None, labels=None, num_peaks_per_label=inf, p_norm=inf) [source]
Find peaks in an image as coordinate list or boolean mask. Peaks are the local maxima in a region o... | skimage.api.skimage.feature#skimage.feature.peak_local_max |
skimage.feature.plot_matches(ax, image1, image2, keypoints1, keypoints2, matches, keypoints_color='k', matches_color=None, only_matches=False, alignment='horizontal') [source]
Plot matched features. Parameters
axmatplotlib.axes.Axes
Matches and image are drawn in this ax.
image1(N, M [, 3]) array
First gray... | skimage.api.skimage.feature#skimage.feature.plot_matches |
skimage.feature.register_translation(src_image, target_image, upsample_factor=1, space='real', return_error=True) [source]
Deprecated function. Use skimage.registration.phase_cross_correlation instead. | skimage.api.skimage.feature#skimage.feature.register_translation |
skimage.feature.shape_index(image, sigma=1, mode='constant', cval=0) [source]
Compute the shape index. The shape index, as defined by Koenderink & van Doorn [1], is a single valued measure of local curvature, assuming the image as a 3D plane with intensities representing heights. It is derived from the eigen values o... | skimage.api.skimage.feature#skimage.feature.shape_index |
skimage.feature.structure_tensor(image, sigma=1, mode='constant', cval=0, order=None) [source]
Compute structure tensor using sum of squared differences. The (2-dimensional) structure tensor A is defined as: A = [Arr Arc]
[Arc Acc]
which is approximated by the weighted sum of squared differences in a local windo... | skimage.api.skimage.feature#skimage.feature.structure_tensor |
skimage.feature.structure_tensor_eigenvalues(A_elems) [source]
Compute eigenvalues of structure tensor. Parameters
A_elemslist of ndarray
The upper-diagonal elements of the structure tensor, as returned by structure_tensor. Returns
ndarray
The eigenvalues of the structure tensor, in decreasing order. The ... | skimage.api.skimage.feature#skimage.feature.structure_tensor_eigenvalues |
skimage.feature.structure_tensor_eigvals(Axx, Axy, Ayy) [source]
Compute eigenvalues of structure tensor. Parameters
Axxndarray
Element of the structure tensor for each pixel in the input image.
Axyndarray
Element of the structure tensor for each pixel in the input image.
Ayyndarray
Element of the struc... | skimage.api.skimage.feature#skimage.feature.structure_tensor_eigvals |
Module: filters
skimage.filters.apply_hysteresis_threshold(…) Apply hysteresis thresholding to image.
skimage.filters.correlate_sparse(image, kernel) Compute valid cross-correlation of padded_array and kernel.
skimage.filters.difference_of_gaussians(…) Find features between low_sigma and high_sigma in size.
ski... | skimage.api.skimage.filters |
skimage.filters.apply_hysteresis_threshold(image, low, high) [source]
Apply hysteresis thresholding to image. This algorithm finds regions where image is greater than high OR image is greater than low and that region is connected to a region greater than high. Parameters
imagearray, shape (M,[ N, …, P])
Graysca... | skimage.api.skimage.filters#skimage.filters.apply_hysteresis_threshold |
skimage.filters.correlate_sparse(image, kernel, mode='reflect') [source]
Compute valid cross-correlation of padded_array and kernel. This function is fast when kernel is large with many zeros. See scipy.ndimage.correlate for a description of cross-correlation. Parameters
imagendarray, dtype float, shape (M, N,[ …... | skimage.api.skimage.filters#skimage.filters.correlate_sparse |
skimage.filters.difference_of_gaussians(image, low_sigma, high_sigma=None, *, mode='nearest', cval=0, multichannel=False, truncate=4.0) [source]
Find features between low_sigma and high_sigma in size. This function uses the Difference of Gaussians method for applying band-pass filters to multi-dimensional arrays. The... | skimage.api.skimage.filters#skimage.filters.difference_of_gaussians |
skimage.filters.farid(image, *, mask=None) [source]
Find the edge magnitude using the Farid transform. Parameters
image2-D array
Image to process.
mask2-D array, optional
An optional mask to limit the application to a certain area. Note that pixels surrounding masked regions are also masked to prevent maske... | skimage.api.skimage.filters#skimage.filters.farid |
skimage.filters.farid_h(image, *, mask=None) [source]
Find the horizontal edges of an image using the Farid transform. Parameters
image2-D array
Image to process.
mask2-D array, optional
An optional mask to limit the application to a certain area. Note that pixels surrounding masked regions are also masked ... | skimage.api.skimage.filters#skimage.filters.farid_h |
skimage.filters.farid_v(image, *, mask=None) [source]
Find the vertical edges of an image using the Farid transform. Parameters
image2-D array
Image to process.
mask2-D array, optional
An optional mask to limit the application to a certain area. Note that pixels surrounding masked regions are also masked to... | skimage.api.skimage.filters#skimage.filters.farid_v |
skimage.filters.frangi(image, sigmas=range(1, 10, 2), scale_range=None, scale_step=None, alpha=0.5, beta=0.5, gamma=15, black_ridges=True, mode='reflect', cval=0) [source]
Filter an image with the Frangi vesselness filter. This filter can be used to detect continuous ridges, e.g. vessels, wrinkles, rivers. It can be ... | skimage.api.skimage.filters#skimage.filters.frangi |
skimage.filters.gabor(image, frequency, theta=0, bandwidth=1, sigma_x=None, sigma_y=None, n_stds=3, offset=0, mode='reflect', cval=0) [source]
Return real and imaginary responses to Gabor filter. The real and imaginary parts of the Gabor filter kernel are applied to the image and the response is returned as a pair of... | skimage.api.skimage.filters#skimage.filters.gabor |
skimage.filters.gabor_kernel(frequency, theta=0, bandwidth=1, sigma_x=None, sigma_y=None, n_stds=3, offset=0) [source]
Return complex 2D Gabor filter kernel. Gabor kernel is a Gaussian kernel modulated by a complex harmonic function. Harmonic function consists of an imaginary sine function and a real cosine function.... | skimage.api.skimage.filters#skimage.filters.gabor_kernel |
skimage.filters.gaussian(image, sigma=1, output=None, mode='nearest', cval=0, multichannel=None, preserve_range=False, truncate=4.0) [source]
Multi-dimensional Gaussian filter. Parameters
imagearray-like
Input image (grayscale or color) to filter.
sigmascalar or sequence of scalars, optional
Standard deviat... | skimage.api.skimage.filters#skimage.filters.gaussian |
skimage.filters.hessian(image, sigmas=range(1, 10, 2), scale_range=None, scale_step=None, alpha=0.5, beta=0.5, gamma=15, black_ridges=True, mode=None, cval=0) [source]
Filter an image with the Hybrid Hessian filter. This filter can be used to detect continuous edges, e.g. vessels, wrinkles, rivers. It can be used to ... | skimage.api.skimage.filters#skimage.filters.hessian |
skimage.filters.inverse(data, impulse_response=None, filter_params={}, max_gain=2, predefined_filter=None) [source]
Apply the filter in reverse to the given data. Parameters
data(M,N) ndarray
Input data.
impulse_responsecallable f(r, c, **filter_params)
Impulse response of the filter. See LPIFilter2D.__init... | skimage.api.skimage.filters#skimage.filters.inverse |
skimage.filters.laplace(image, ksize=3, mask=None) [source]
Find the edges of an image using the Laplace operator. Parameters
imagendarray
Image to process.
ksizeint, optional
Define the size of the discrete Laplacian operator such that it will have a size of (ksize,) * image.ndim.
maskndarray, optional
... | skimage.api.skimage.filters#skimage.filters.laplace |
class skimage.filters.LPIFilter2D(impulse_response, **filter_params) [source]
Bases: object Linear Position-Invariant Filter (2-dimensional)
__init__(impulse_response, **filter_params) [source]
Parameters
impulse_responsecallable f(r, c, **filter_params)
Function that yields the impulse response. r and c ar... | skimage.api.skimage.filters#skimage.filters.LPIFilter2D |
__init__(impulse_response, **filter_params) [source]
Parameters
impulse_responsecallable f(r, c, **filter_params)
Function that yields the impulse response. r and c are 1-dimensional vectors that represent row and column positions, in other words coordinates are (r[0],c[0]),(r[0],c[1]) etc. **filter_params are ... | skimage.api.skimage.filters#skimage.filters.LPIFilter2D.__init__ |
skimage.filters.median(image, selem=None, out=None, mode='nearest', cval=0.0, behavior='ndimage') [source]
Return local median of an image. Parameters
imagearray-like
Input image.
selemndarray, optional
If behavior=='rank', selem is a 2-D array of 1’s and 0’s. If behavior=='ndimage', selem is a N-D array of... | skimage.api.skimage.filters#skimage.filters.median |
skimage.filters.meijering(image, sigmas=range(1, 10, 2), alpha=None, black_ridges=True, mode='reflect', cval=0) [source]
Filter an image with the Meijering neuriteness filter. This filter can be used to detect continuous ridges, e.g. neurites, wrinkles, rivers. It can be used to calculate the fraction of the whole im... | skimage.api.skimage.filters#skimage.filters.meijering |
skimage.filters.prewitt(image, mask=None, *, axis=None, mode='reflect', cval=0.0) [source]
Find the edge magnitude using the Prewitt transform. Parameters
imagearray
The input image.
maskarray of bool, optional
Clip the output image to this mask. (Values where mask=0 will be set to 0.)
axisint or sequence... | skimage.api.skimage.filters#skimage.filters.prewitt |
skimage.filters.prewitt_h(image, mask=None) [source]
Find the horizontal edges of an image using the Prewitt transform. Parameters
image2-D array
Image to process.
mask2-D array, optional
An optional mask to limit the application to a certain area. Note that pixels surrounding masked regions are also masked... | skimage.api.skimage.filters#skimage.filters.prewitt_h |
skimage.filters.prewitt_v(image, mask=None) [source]
Find the vertical edges of an image using the Prewitt transform. Parameters
image2-D array
Image to process.
mask2-D array, optional
An optional mask to limit the application to a certain area. Note that pixels surrounding masked regions are also masked t... | skimage.api.skimage.filters#skimage.filters.prewitt_v |
Module: filters.rank
skimage.filters.rank.autolevel(image, selem) Auto-level image using local histogram.
skimage.filters.rank.autolevel_percentile(…) Return greyscale local autolevel of an image.
skimage.filters.rank.bottomhat(image, selem) Local bottom-hat of an image.
skimage.filters.rank.enhance_contrast(im... | skimage.api.skimage.filters.rank |
skimage.filters.rank.autolevel(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Auto-level image using local histogram. This filter locally stretches the histogram of gray values to cover the entire range of values from “white” to “black”. Parameters
image([P,] M, N) ndarra... | skimage.api.skimage.filters.rank#skimage.filters.rank.autolevel |
skimage.filters.rank.autolevel_percentile(image, selem, out=None, mask=None, shift_x=False, shift_y=False, p0=0, p1=1) [source]
Return greyscale local autolevel of an image. This filter locally stretches the histogram of greyvalues to cover the entire range of values from “white” to “black”. Only greyvalues between p... | skimage.api.skimage.filters.rank#skimage.filters.rank.autolevel_percentile |
skimage.filters.rank.bottomhat(image, selem, out=None, mask=None, shift_x=False, shift_y=False) [source]
Local bottom-hat of an image. This filter computes the morphological closing of the image and then subtracts the result from the original image. Parameters
image2-D array (integer or float)
Input image.
se... | skimage.api.skimage.filters.rank#skimage.filters.rank.bottomhat |
skimage.filters.rank.enhance_contrast(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Enhance contrast of an image. This replaces each pixel by the local maximum if the pixel gray value is closer to the local maximum than the local minimum. Otherwise it is replaced by the loca... | skimage.api.skimage.filters.rank#skimage.filters.rank.enhance_contrast |
skimage.filters.rank.enhance_contrast_percentile(image, selem, out=None, mask=None, shift_x=False, shift_y=False, p0=0, p1=1) [source]
Enhance contrast of an image. This replaces each pixel by the local maximum if the pixel greyvalue is closer to the local maximum than the local minimum. Otherwise it is replaced by t... | skimage.api.skimage.filters.rank#skimage.filters.rank.enhance_contrast_percentile |
skimage.filters.rank.entropy(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Local entropy. The entropy is computed using base 2 logarithm i.e. the filter returns the minimum number of bits needed to encode the local gray level distribution. Parameters
image([P,] M, N) nda... | skimage.api.skimage.filters.rank#skimage.filters.rank.entropy |
skimage.filters.rank.equalize(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Equalize image using local histogram. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarray of 1’s and 0’s.
out([P,] M, N)... | skimage.api.skimage.filters.rank#skimage.filters.rank.equalize |
skimage.filters.rank.geometric_mean(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return local geometric mean of an image. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarray of 1’s and 0’s.
out([... | skimage.api.skimage.filters.rank#skimage.filters.rank.geometric_mean |
skimage.filters.rank.gradient(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return local gradient of an image (i.e. local maximum - local minimum). Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarra... | skimage.api.skimage.filters.rank#skimage.filters.rank.gradient |
skimage.filters.rank.gradient_percentile(image, selem, out=None, mask=None, shift_x=False, shift_y=False, p0=0, p1=1) [source]
Return local gradient of an image (i.e. local maximum - local minimum). Only greyvalues between percentiles [p0, p1] are considered in the filter. Parameters
image2-D array (uint8, uint16... | skimage.api.skimage.filters.rank#skimage.filters.rank.gradient_percentile |
skimage.filters.rank.majority(image, selem, *, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Majority filter assign to each pixel the most occuring value within its neighborhood. Parameters
imagendarray
Image array (uint8, uint16 array).
selem2-D array (integer or float)
The nei... | skimage.api.skimage.filters.rank#skimage.filters.rank.majority |
skimage.filters.rank.maximum(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return local maximum of an image. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarray of 1’s and 0’s.
out([P,] M, N) arra... | skimage.api.skimage.filters.rank#skimage.filters.rank.maximum |
skimage.filters.rank.mean(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return local mean of an image. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarray of 1’s and 0’s.
out([P,] M, N) array (sam... | skimage.api.skimage.filters.rank#skimage.filters.rank.mean |
skimage.filters.rank.mean_bilateral(image, selem, out=None, mask=None, shift_x=False, shift_y=False, s0=10, s1=10) [source]
Apply a flat kernel bilateral filter. This is an edge-preserving and noise reducing denoising filter. It averages pixels based on their spatial closeness and radiometric similarity. Spatial clos... | skimage.api.skimage.filters.rank#skimage.filters.rank.mean_bilateral |
skimage.filters.rank.mean_percentile(image, selem, out=None, mask=None, shift_x=False, shift_y=False, p0=0, p1=1) [source]
Return local mean of an image. Only greyvalues between percentiles [p0, p1] are considered in the filter. Parameters
image2-D array (uint8, uint16)
Input image.
selem2-D array
The neigh... | skimage.api.skimage.filters.rank#skimage.filters.rank.mean_percentile |
skimage.filters.rank.median(image, selem=None, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return local median of an image. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarray of 1’s and 0’s. If None, a full sq... | skimage.api.skimage.filters.rank#skimage.filters.rank.median |
skimage.filters.rank.minimum(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return local minimum of an image. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarray of 1’s and 0’s.
out([P,] M, N) arra... | skimage.api.skimage.filters.rank#skimage.filters.rank.minimum |
skimage.filters.rank.modal(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return local mode of an image. The mode is the value that appears most often in the local histogram. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborh... | skimage.api.skimage.filters.rank#skimage.filters.rank.modal |
skimage.filters.rank.noise_filter(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Noise feature. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarray of 1’s and 0’s.
out([P,] M, N) array (same dtype ... | skimage.api.skimage.filters.rank#skimage.filters.rank.noise_filter |
skimage.filters.rank.otsu(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Local Otsu’s threshold value for each pixel. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarray of 1’s and 0’s.
out([P,] M,... | skimage.api.skimage.filters.rank#skimage.filters.rank.otsu |
skimage.filters.rank.percentile(image, selem, out=None, mask=None, shift_x=False, shift_y=False, p0=0) [source]
Return local percentile of an image. Returns the value of the p0 lower percentile of the local greyvalue distribution. Only greyvalues between percentiles [p0, p1] are considered in the filter. Parameters ... | skimage.api.skimage.filters.rank#skimage.filters.rank.percentile |
skimage.filters.rank.pop(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return the local number (population) of pixels. The number of pixels is defined as the number of pixels which are included in the structuring element and the mask. Parameters
image([P,] M, N) ndarray ... | skimage.api.skimage.filters.rank#skimage.filters.rank.pop |
skimage.filters.rank.pop_bilateral(image, selem, out=None, mask=None, shift_x=False, shift_y=False, s0=10, s1=10) [source]
Return the local number (population) of pixels. The number of pixels is defined as the number of pixels which are included in the structuring element and the mask. Additionally pixels must have a... | skimage.api.skimage.filters.rank#skimage.filters.rank.pop_bilateral |
skimage.filters.rank.pop_percentile(image, selem, out=None, mask=None, shift_x=False, shift_y=False, p0=0, p1=1) [source]
Return the local number (population) of pixels. The number of pixels is defined as the number of pixels which are included in the structuring element and the mask. Only greyvalues between percenti... | skimage.api.skimage.filters.rank#skimage.filters.rank.pop_percentile |
skimage.filters.rank.subtract_mean(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return image subtracted from its local mean. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The neighborhood expressed as an ndarray of 1’s and 0’s.
ou... | skimage.api.skimage.filters.rank#skimage.filters.rank.subtract_mean |
skimage.filters.rank.subtract_mean_percentile(image, selem, out=None, mask=None, shift_x=False, shift_y=False, p0=0, p1=1) [source]
Return image subtracted from its local mean. Only greyvalues between percentiles [p0, p1] are considered in the filter. Parameters
image2-D array (uint8, uint16)
Input image.
sel... | skimage.api.skimage.filters.rank#skimage.filters.rank.subtract_mean_percentile |
skimage.filters.rank.sum(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Return the local sum of pixels. Note that the sum may overflow depending on the data type of the input array. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input image.
selemndarray
The ne... | skimage.api.skimage.filters.rank#skimage.filters.rank.sum |
skimage.filters.rank.sum_bilateral(image, selem, out=None, mask=None, shift_x=False, shift_y=False, s0=10, s1=10) [source]
Apply a flat kernel bilateral filter. This is an edge-preserving and noise reducing denoising filter. It averages pixels based on their spatial closeness and radiometric similarity. Spatial close... | skimage.api.skimage.filters.rank#skimage.filters.rank.sum_bilateral |
skimage.filters.rank.sum_percentile(image, selem, out=None, mask=None, shift_x=False, shift_y=False, p0=0, p1=1) [source]
Return the local sum of pixels. Only greyvalues between percentiles [p0, p1] are considered in the filter. Note that the sum may overflow depending on the data type of the input array. Parameters... | skimage.api.skimage.filters.rank#skimage.filters.rank.sum_percentile |
skimage.filters.rank.threshold(image, selem, out=None, mask=None, shift_x=False, shift_y=False, shift_z=False) [source]
Local threshold of an image. The resulting binary mask is True if the gray value of the center pixel is greater than the local mean. Parameters
image([P,] M, N) ndarray (uint8, uint16)
Input i... | skimage.api.skimage.filters.rank#skimage.filters.rank.threshold |
skimage.filters.rank.threshold_percentile(image, selem, out=None, mask=None, shift_x=False, shift_y=False, p0=0) [source]
Local threshold of an image. The resulting binary mask is True if the greyvalue of the center pixel is greater than the local mean. Only greyvalues between percentiles [p0, p1] are considered in t... | skimage.api.skimage.filters.rank#skimage.filters.rank.threshold_percentile |
skimage.filters.rank.tophat(image, selem, out=None, mask=None, shift_x=False, shift_y=False) [source]
Local top-hat of an image. This filter computes the morphological opening of the image and then subtracts the result from the original image. Parameters
image2-D array (integer or float)
Input image.
selem2-D... | skimage.api.skimage.filters.rank#skimage.filters.rank.tophat |
skimage.filters.rank.windowed_histogram(image, selem, out=None, mask=None, shift_x=False, shift_y=False, n_bins=None) [source]
Normalized sliding window histogram Parameters
image2-D array (integer or float)
Input image.
selem2-D array (integer or float)
The neighborhood expressed as a 2-D array of 1’s and ... | skimage.api.skimage.filters.rank#skimage.filters.rank.windowed_histogram |
skimage.filters.rank_order(image) [source]
Return an image of the same shape where each pixel is the index of the pixel value in the ascending order of the unique values of image, aka the rank-order value. Parameters
imagendarray
Returns
labelsndarray of type np.uint32, of shape image.shape
New array wher... | skimage.api.skimage.filters#skimage.filters.rank_order |
skimage.filters.roberts(image, mask=None) [source]
Find the edge magnitude using Roberts’ cross operator. Parameters
image2-D array
Image to process.
mask2-D array, optional
An optional mask to limit the application to a certain area. Note that pixels surrounding masked regions are also masked to prevent ma... | skimage.api.skimage.filters#skimage.filters.roberts |
skimage.filters.roberts_neg_diag(image, mask=None) [source]
Find the cross edges of an image using the Roberts’ Cross operator. The kernel is applied to the input image to produce separate measurements of the gradient component one orientation. Parameters
image2-D array
Image to process.
mask2-D array, option... | skimage.api.skimage.filters#skimage.filters.roberts_neg_diag |
skimage.filters.roberts_pos_diag(image, mask=None) [source]
Find the cross edges of an image using Roberts’ cross operator. The kernel is applied to the input image to produce separate measurements of the gradient component one orientation. Parameters
image2-D array
Image to process.
mask2-D array, optional
... | skimage.api.skimage.filters#skimage.filters.roberts_pos_diag |
skimage.filters.sato(image, sigmas=range(1, 10, 2), black_ridges=True, mode=None, cval=0) [source]
Filter an image with the Sato tubeness filter. This filter can be used to detect continuous ridges, e.g. tubes, wrinkles, rivers. It can be used to calculate the fraction of the whole image containing such objects. Defi... | skimage.api.skimage.filters#skimage.filters.sato |
skimage.filters.scharr(image, mask=None, *, axis=None, mode='reflect', cval=0.0) [source]
Find the edge magnitude using the Scharr transform. Parameters
imagearray
The input image.
maskarray of bool, optional
Clip the output image to this mask. (Values where mask=0 will be set to 0.)
axisint or sequence o... | skimage.api.skimage.filters#skimage.filters.scharr |
skimage.filters.scharr_h(image, mask=None) [source]
Find the horizontal edges of an image using the Scharr transform. Parameters
image2-D array
Image to process.
mask2-D array, optional
An optional mask to limit the application to a certain area. Note that pixels surrounding masked regions are also masked t... | skimage.api.skimage.filters#skimage.filters.scharr_h |
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