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ParseError: not well-formed (invalid token) using cElementTree
13,046,240
6
2012-10-24T09:18:51Z
13,046,348
12
2012-10-24T09:25:11Z
[ "python", "parsing", "elementtree" ]
I receive xml strings from an external source that can contains unsanitized user contributed content. The following xml string gave a ParseError in `cElementTree`: ``` >>> print repr(s) '<Comment>dddddddd\x08\x08\x08\x08\x08\x08_____</Comment>' >>> import xml.etree.cElementTree as ET >>> ET.XML(s) Traceback (most re...
It seems to complain about `\x08` you will need to escape that. **Edit:** Or you can have the parser ignore the errors using `recover` ``` from lxml import etree parser = etree.XMLParser(recover=True) etree.fromstring(xmlstring, parser=parser) ```
ParseError: not well-formed (invalid token) using cElementTree
13,046,240
6
2012-10-24T09:18:51Z
20,204,635
12
2013-11-25T22:24:57Z
[ "python", "parsing", "elementtree" ]
I receive xml strings from an external source that can contains unsanitized user contributed content. The following xml string gave a ParseError in `cElementTree`: ``` >>> print repr(s) '<Comment>dddddddd\x08\x08\x08\x08\x08\x08_____</Comment>' >>> import xml.etree.cElementTree as ET >>> ET.XML(s) Traceback (most re...
I was having the same error (with ElementTree). In my case it was because of encodings, and I was able to solve it without having to use an external library. Hope this helps other people finding this question based on the title. ([reference](http://stackoverflow.com/a/9209547/2697658)) ``` import xml.etree.ElementTree...
Efficient ways to duplicate array/list in Python
13,047,895
7
2012-10-24T11:02:01Z
13,048,047
9
2012-10-24T11:10:39Z
[ "python", "ruby", "arrays" ]
Note: I'm a Ruby developer trying to find my way in Python. When I wanted to figure out why some scripts use `mylist[:]` instead of `list(mylist)` to duplicate lists, I made a quick benchmark of the various methods to duplicate `range(10)` (see code below). **EDIT:** I updated the tests to make use of Python's `timei...
Use the [`timeit`](http://docs.python.org/library/timeit.html) module in python for testing timings. ``` from copy import * a=range(1000) def cop(): b=copy(a) def func1(): b=list(a) def slice(): b=a[:] def slice_len(): b=a[0:len(a)] if __name__=="__main__": import timeit print "copy(a)"...
pandas: apply function to DataFrame that can return multiple rows
13,050,003
7
2012-10-24T13:14:11Z
13,052,373
8
2012-10-24T15:25:40Z
[ "python", "pandas", "data-analysis" ]
I am trying to transform DataFrame, such that some of the rows will be replicated a given number of times. For example: ``` df = pd.DataFrame({'class': ['A', 'B', 'C'], 'count':[1,0,2]}) class count 0 A 1 1 B 0 2 C 2 ``` should be transformed to: ``` class 0 A 1 C 2 ...
You could use groupby: ``` def f(group): row = group.irow(0) return DataFrame({'class': [row['class']] * row['count']}) df.groupby('class', group_keys=False).apply(f) ``` so you get ``` In [25]: df.groupby('class', group_keys=False).apply(f) Out[25]: class 0 A 0 C 1 C ``` You can fix the inde...
Encrypt data with python, decrypt in php
13,051,293
4
2012-10-24T14:27:03Z
13,051,720
11
2012-10-24T14:50:22Z
[ "php", "python", "encryption" ]
I am looking for two fitting code snippets to encode some text with python, which is to be decoded in php. I am looking for something "easy" and compatible, and I have not much encryption experience myself. If someone could give a working example that would be great!
python encrypt ``` from Crypto.Cipher import AES import base64 import os # the block size for the cipher object; must be 16, 24, or 32 for AES BLOCK_SIZE = 32 BLOCK_SZ = 14 # the character used for padding--with a block cipher such as AES, the value # you encrypt must be a multiple of BLOCK_SIZE in length. This char...
Tastypie : Authentication for GET and Anonymous for POST
13,051,544
10
2012-10-24T14:40:50Z
13,202,569
17
2012-11-02T20:24:49Z
[ "python", "django", "api", "rest", "tastypie" ]
I use Django/Tastypie to manage my user collection. Is it possible to allow anonymous users to POST in the API (when creating a new user at some endpoint) and restrict authenticated users to GET only their own user, but not all the users ? Thanks for your help.
I found the easiest thing to do was subclass the Authentication class I'm using. Just override the `is_authenticated` method to return `True` when the method is POST. ``` class AnonymousPostAuthentication(BasicAuthentication): """ No auth on post / for user creation """ def is_authenticated(self, request, **k...
Tornado blocking asynchronous requests
13,051,591
10
2012-10-24T14:43:13Z
13,051,972
14
2012-10-24T15:04:19Z
[ "python", "tornado", "long-polling" ]
Using Tornado, I have a Get request that takes a long time as it makes many requests to another web service and processes the data, could take minutes to fully complete. I don't want this to block the entire web server from responding to other requests, which it currently does. As I understand it, Tornado is single th...
Here's a complete sample Tornado app that uses the Async HTTP client and the `gen.Task` module to make things simple. If you read more about `gen.Task` in the docs you'll see that you can actually dispatch multiple requests at the same time. This is using the core idea of Tornado where everything is no blocking and st...
GAE - AppEngine - DeadlineExceededError: Deadline exceeded while waiting for HTTP response from URL:
13,051,628
15
2012-10-24T14:44:52Z
13,053,175
8
2012-10-24T16:09:03Z
[ "python", "google-app-engine", "urlfetch" ]
I have a Google AppEngine application which runs great on my local machine. The app posts a image (from a url) to my facebook wall. However, when I deploy it to Google's servers, I get an error: ``` DeadlineExceededError: Deadline exceeded while waiting for HTTP response from URL: ``` The offending code is: ``` face...
Try setting the deadline for urlfetch to 30seconds or more(depending on whether you're calling urlfetch from within a task handler or request handler) More info about urlfetch:[Url Fetch Docs](http://developers.google.com/appengine/docs/python/urlfetch/)
GAE - AppEngine - DeadlineExceededError: Deadline exceeded while waiting for HTTP response from URL:
13,051,628
15
2012-10-24T14:44:52Z
22,091,200
23
2014-02-28T09:32:54Z
[ "python", "google-app-engine", "urlfetch" ]
I have a Google AppEngine application which runs great on my local machine. The app posts a image (from a url) to my facebook wall. However, when I deploy it to Google's servers, I get an error: ``` DeadlineExceededError: Deadline exceeded while waiting for HTTP response from URL: ``` The offending code is: ``` face...
Simple answer: the default deadline for url fetching is set to 5 seconds. How to fix: ``` from google.appengine.api import urlfetch urlfetch.set_default_fetch_deadline(60) ```
nested list comprehension with os.walk
13,051,785
2
2012-10-24T14:53:32Z
13,051,822
11
2012-10-24T14:55:23Z
[ "python", "list-comprehension" ]
Trying to enumerate all files in a certain directory (like 'find .' in Linux, or 'dir /s /b' in Windows). I came up with the following nested list comprehension: ``` from os import walk from os.path import join root = r'c:\windows' #choose any folder here allfiles = [join(root,f) for f in files for root,dirs,fil...
You need to reverse the nesting; ``` allfiles = [join(root,f) for root,dirs,files in walk(root) for f in files] ``` See the [list comprehension documentation](http://docs.python.org/reference/expressions.html#list-displays): > When a list comprehension is supplied, it consists of a single expression followed by at l...
python crypt in OSX
13,052,047
7
2012-10-24T15:08:07Z
13,052,999
7
2012-10-24T15:59:29Z
[ "python", "c", "encryption" ]
I have a Django application which resets unix user passwords running in an Ubuntu machine, but my development environment is OS X and I've come across this annoying situation: OS X: ``` >>> import crypt >>> crypt.crypt('test','$1$VFvON1xK$') '$1SoNol0Ye6Xk' ``` Linux: ``` >>> import crypt >>> crypt.crypt('test','$1...
This is because Linux's glibc handles passwords differently - the salt of the password on Linux corresponds to the type of hash that it generates. OSX crypt() is plain-old DES encryption, (which is horrible). glibc supports a variety of hash algorithms (MD5, Blowfish, SHA-256, etc). If we take a look at the [crypt.3]...
matplotlib: how to decrease density of tick labels in subplots?
13,052,844
11
2012-10-24T15:50:51Z
13,053,381
12
2012-10-24T16:22:22Z
[ "python", "plot", "matplotlib", "pandas" ]
I'm looking to decrease density of tick labels on differing subplot ``` import pandas as pd import matplotlib.pyplot as plt import matplotlib.gridspec as gridspec from StringIO import StringIO data = """\ a b c d z 54.65 6.27 19.53 4.54 w -1.27 4.41 11.74 3.06 d 5.51 3.39 22.98 2....
You can set the ticks to where you want just like you set the xticks. ``` import numpy as np ax0.yaxis.set_ticks(np.arange(70000,80000,2500)) ``` This will create four ticks evenly spaced for your ax0 subplot. You can do something similar for your other subplots.
matplotlib: how to decrease density of tick labels in subplots?
13,052,844
11
2012-10-24T15:50:51Z
13,053,967
27
2012-10-24T16:55:56Z
[ "python", "plot", "matplotlib", "pandas" ]
I'm looking to decrease density of tick labels on differing subplot ``` import pandas as pd import matplotlib.pyplot as plt import matplotlib.gridspec as gridspec from StringIO import StringIO data = """\ a b c d z 54.65 6.27 19.53 4.54 w -1.27 4.41 11.74 3.06 d 5.51 3.39 22.98 2....
An improvement over the approach suggestion by [Aman](http://stackoverflow.com/users/484596/aman) is the following: ``` import matplotlib.pyplot as plt fig = plt.figure() ax = fig.add_subplot(1, 1, 1) # ... plot some things ... # Find at most 101 ticks on the y-axis at 'nice' locations max_yticks = 100 yloc = plt.M...
Comparing two lists using the greater than or less than operator
13,052,857
11
2012-10-24T15:51:55Z
13,052,908
18
2012-10-24T15:54:27Z
[ "python", "list" ]
I noticed a piece of code recently directly comparing two lists of integers like so: ``` a = [10,3,5, ...] b = [5,4,3, ...,] if a > b: ... ``` which seemed a bit peculiar, but I imagined it would return `True` if all of `list_a`'s elements are larger then `list_b`'s and False if each element is equal or `list_b`...
From [Comparing Sequences and Other Types](http://docs.python.org/tutorial/datastructures.html#comparing-sequences-and-other-types) in the Python tutorial: > The comparison uses lexicographical ordering: first the first two items are compared, and if they differ this determines the outcome of the comparison; if they a...
drawing a line on an image with PIL
13,053,443
18
2012-10-24T16:26:14Z
13,053,545
26
2012-10-24T16:31:37Z
[ "python", "python-imaging-library" ]
I want to draw a line and show it. assume I have a PIL image. ``` draw = ImageDraw.Draw(pilImage) draw.line((100,200, 150,300), fill=128) ``` How can I show the image? Before drawing the line I could do: ``` imshow(pilImage) ``` but `imshow(draw)` does not show the image. How do I convert this back to a PIL image?
This should work: ``` from PIL import Image, ImageDraw im = Image.new('RGBA', (400, 400), (0, 255, 0, 0)) draw = ImageDraw.Draw(im) draw.line((100,200, 150,300), fill=128) im.show() ``` Basically using `ImageDraw` draw over the image, then display that image after changes, to draw a thick line pass width ``` draw....
Confused with python lists: are they or are they not iterators?
13,054,057
32
2012-10-24T17:00:47Z
13,054,102
12
2012-10-24T17:03:23Z
[ "python", "list", "iterator" ]
I am studying [Alex Marteli's Python in a Nutshell](http://rads.stackoverflow.com/amzn/click/0596100469) and the book suggests that any object that has a `next()` method is (or at least can be used as) an **iterator**. It also suggests that most iterators are built by implicit or explicit calls to a method called `iter...
You need to convert list to an iterator first using `iter()`: ``` In [7]: x = [0, 1, 2, 3, 4, 5, 6, 7, 8, 9] In [8]: it=iter(x) In [9]: for i in range(10): it.next() ....: ....: Out[10]: 0 Out[10]: 1 Out[10]: 2 Out[10]: 3 Out[10]: 4 Out[10]: 5 Out[10]: 6 Out[10]: 7 Out[10]: 8 Out[10]: 9 In [12]:...
Confused with python lists: are they or are they not iterators?
13,054,057
32
2012-10-24T17:00:47Z
13,054,109
46
2012-10-24T17:03:44Z
[ "python", "list", "iterator" ]
I am studying [Alex Marteli's Python in a Nutshell](http://rads.stackoverflow.com/amzn/click/0596100469) and the book suggests that any object that has a `next()` method is (or at least can be used as) an **iterator**. It also suggests that most iterators are built by implicit or explicit calls to a method called `iter...
They are *iterable*, but they are not *iterators*. They can be passed to `iter()` to get an iterator for them either implicitly (e.g. via `for`) or explicitly, but they are not iterators in and of themselves.
Confused with python lists: are they or are they not iterators?
13,054,057
32
2012-10-24T17:00:47Z
13,054,770
10
2012-10-24T17:44:34Z
[ "python", "list", "iterator" ]
I am studying [Alex Marteli's Python in a Nutshell](http://rads.stackoverflow.com/amzn/click/0596100469) and the book suggests that any object that has a `next()` method is (or at least can be used as) an **iterator**. It also suggests that most iterators are built by implicit or explicit calls to a method called `iter...
Just in case you are confused about what the difference between iterables and iterators is. An iterator is an object representing a stream of data. It implements the iterator protocol: * `__iter__` method * `next` method Repeated calls to the iterator’s next() method return successive items in the stream. When no m...
Python: Finding multiple roots of nonlinear equation
13,054,758
6
2012-10-24T17:43:41Z
13,055,843
8
2012-10-24T18:54:30Z
[ "python", "optimization", "scipy" ]
Assume the following function: `f(x) = x * cos(x-4)` With `x = [-2.5, 2.5]` this function crosses `0` at `f(0) = 0` and `f(-0.71238898) = 0`. This was determined with the following code: ``` import math from scipy.optimize import fsolve def func(x): return x*math.cos(x-4) x0 = fsolve(func, 0.0) # returns [0.] x...
I once wrote a module for this task. It's based on chapter 4.3 from the book [Numerical Methods in Engineering with Python by Jaan Kiusalaas](http://www.amazon.de/Numerical-Methods-Engineering-Python-Kiusalaas/dp/0521191327/ref=sr_1_1?ie=UTF8&qid=1351104745&sr=8-1): ``` import math def rootsearch(f,a,b,dx): x1 = ...
How to print module documentation in Python
13,054,970
7
2012-10-24T17:56:08Z
13,054,992
7
2012-10-24T17:57:33Z
[ "python", "python-2.7" ]
I know this question is very simple, I know it must have been asked a lot of times and I did my search on both SO and Google but I could not find the answer, probably due to my lack of ability of putting what I seek into a proper sentence. I want to be able to read the docs of what I import. For example if I import x...
`pydoc foo.bar` from the command line or `help(foo.bar)` or `help('foo.bar')` from Python.
How to print module documentation in Python
13,054,970
7
2012-10-24T17:56:08Z
13,055,021
7
2012-10-24T18:00:01Z
[ "python", "python-2.7" ]
I know this question is very simple, I know it must have been asked a lot of times and I did my search on both SO and Google but I could not find the answer, probably due to my lack of ability of putting what I seek into a proper sentence. I want to be able to read the docs of what I import. For example if I import x...
try `.__doc__` ``` In [14]: import itertools In [15]: print itertools.__doc__ Functional tools for creating and using iterators.......... In [18]: print itertools.permutations.__doc__ permutations(iterable[, r]) --> permutations object Return successive r-length permutations of elements in the iterable. permutatio...
HTTPError: HTTP Error 403: Forbidden
13,055,208
7
2012-10-24T18:12:37Z
13,055,444
17
2012-10-24T18:29:32Z
[ "python", "python-2.7", "beautifulsoup" ]
I making a python script for personal use but it's not working for wikipedia... This work: ``` import urllib2, sys from bs4 import BeautifulSoup site = "http://youtube.com" page = urllib2.urlopen(site) soup = BeautifulSoup(page) print soup ``` This not work: ``` import urllib2, sys from bs4 import BeautifulSoup s...
Within the current code ``` import urllib2, sys from BeautifulSoup import BeautifulSoup site= "http://en.wikipedia.org/wiki/StackOverflow" hdr = {'User-Agent': 'Mozilla/5.0'} req = urllib2.Request(site,headers=hdr) page = urllib2.urlopen(req) soup = BeautifulSoup(page) print soup ``` The reason modified version work...
Python parsing log file for IP address and Protocol
13,056,858
6
2012-10-24T20:05:53Z
13,056,942
7
2012-10-24T20:12:46Z
[ "python", "parsing", "loops", "hash" ]
this is my first question asked here at stackoverflow and am really looking forward to being part of this community. I am new to program and python was the most recommended first program by many people. **Anyways**. I have a log file which looks like this: ``` "No.","Time","Source","Destination","Protocol","Info" "1"...
You can parse the file using the [`csv` module](http://docs.python.org/library/csv.html): ``` import csv with open('logfile.txt') as logfile: for row in csv.reader(logfile): no, time, source, dest, protocol, info = row # do stuff with these ``` I can't quite tell what you're asking, but I thin...
Google App Engine NDB custom key id
13,058,327
22
2012-10-24T21:50:01Z
13,058,461
28
2012-10-24T21:58:25Z
[ "python", "google-app-engine", "app-engine-ndb", "djangoappengine" ]
When I create an object with ndb's method put it creates the key automatically of the type Key(kind, id) where id is a number. All over the documentation it shows that you can use a string for the key's id but I couldn't find out how to do this automatically when an object is created. I have a User model and I was thi...
``` class UserModel(ndb.Model): ... user_model_entity = UserModel(id='some_string', ...) ``` If these IDs are subject to change, this may be a bad idea. If it's your own system and you can react to potential changes, it is a fine idea, but you need make sure the IDs will be unique and relatively stable before decid...
Google App Engine NDB custom key id
13,058,327
22
2012-10-24T21:50:01Z
13,058,736
13
2012-10-24T22:23:09Z
[ "python", "google-app-engine", "app-engine-ndb", "djangoappengine" ]
When I create an object with ndb's method put it creates the key automatically of the type Key(kind, id) where id is a number. All over the documentation it shows that you can use a string for the key's id but I couldn't find out how to do this automatically when an object is created. I have a User model and I was thi...
You specify the id of the entity at the time of creation. When you define the model, you don't set an id attribute there. Thus, for example you have: ``` class User(ndb.Model): # fields here ``` When you create the model, you have: ``` user = User(id='username', ...) ``` Since the username is unique and you val...
Is there a way to detect when a python program is going to end?
13,058,739
4
2012-10-24T22:23:37Z
13,058,766
7
2012-10-24T22:25:48Z
[ "python", "callback", "python-2.7", "python-2.x" ]
Is there a way to detect when a python program is going to end? Something like a callback I can connect to? I have a class thats keeping a [cache](http://stackoverflow.com/questions/13054250/python-object-cache) and I'd like to write the cache out to disk before the program ends. If I can do that then I can load it up...
[Yes, there is](http://docs.python.org/library/atexit.html): ``` import atexit @atexit.register def writecache(): # etc ```
Is there a way to detect when a python program is going to end?
13,058,739
4
2012-10-24T22:23:37Z
13,058,767
7
2012-10-24T22:25:57Z
[ "python", "callback", "python-2.7", "python-2.x" ]
Is there a way to detect when a python program is going to end? Something like a callback I can connect to? I have a class thats keeping a [cache](http://stackoverflow.com/questions/13054250/python-object-cache) and I'd like to write the cache out to disk before the program ends. If I can do that then I can load it up...
You can use [`atexit.register(some_function)`](http://docs.python.org/library/atexit.html#atexit.register) or simply decorate your function with `@atexit.register`. It will be called when the interpreter terminates. Example: ``` import atexit @atexit.register def save_cache(): print 'save cache' ``` or ``` impo...
Using Flask-SQLAlchemy in Blueprint models without reference to the app
13,058,800
41
2012-10-24T22:28:25Z
13,364,932
7
2012-11-13T16:46:10Z
[ "python", "design", "flask", "flask-sqlalchemy" ]
I'm trying to create a "modular application" in Flask using Blueprints. When creating models, however, I'm running into the problem of having to reference the app in order to get the `db`-object provided by Flask-SQLAlchemy. I'd like to be able to use some blueprints with more than one app (similar to how Django apps ...
Blueprints are more of a logical separation of concerns than actual applications. The database instance should be setup by the application and not a Blueprint to allow things like background processing and other modules to be configured in one spot. If a Blueprint setup the database, it is then a dependency to the res...
Using Flask-SQLAlchemy in Blueprint models without reference to the app
13,058,800
41
2012-10-24T22:28:25Z
13,432,373
18
2012-11-17T16:22:06Z
[ "python", "design", "flask", "flask-sqlalchemy" ]
I'm trying to create a "modular application" in Flask using Blueprints. When creating models, however, I'm running into the problem of having to reference the app in order to get the `db`-object provided by Flask-SQLAlchemy. I'd like to be able to use some blueprints with more than one app (similar to how Django apps ...
I believe the truest answer is that modular blueprints shouldn't concern themselves directly with data access, but instead rely on the application providing a compatible implementation. So given your example blueprint. ``` from flask import current_app, Blueprint, render_template flat_pages = Blueprint('flat_pages',...
Is there any python function/library for calculate binomial confidence intervals?
13,059,011
12
2012-10-24T22:48:20Z
13,061,491
10
2012-10-25T04:15:26Z
[ "python", "statistics" ]
I need to calculate binomial confidence intervals for large set of data within a script of python. Do you know any function or library of python that can do this? Ideally I would like to have a function like this <http://statpages.org/confint.html> implemented on python. Thanks for your time.
I would say that R (or another stats package) would probably serve you better if you have the option. That said, if you only need the binomial confidence interval you probably don't need an entire library. Here's the function in my most naive translation from javascript. ``` def binP(N, p, x1, x2): p = float(p) ...
Is there any python function/library for calculate binomial confidence intervals?
13,059,011
12
2012-10-24T22:48:20Z
25,196,394
8
2014-08-08T05:06:22Z
[ "python", "statistics" ]
I need to calculate binomial confidence intervals for large set of data within a script of python. Do you know any function or library of python that can do this? Ideally I would like to have a function like this <http://statpages.org/confint.html> implemented on python. Thanks for your time.
Just noting because it hasn't been posted elsewhere here that [`statsmodels.stats.proportion.proportion_confint`](http://statsmodels.sourceforge.net/devel/generated/statsmodels.stats.proportion.proportion_confint.html) lets you get a binomial confidence interval with a variety of methods. It only does symmetric interva...
Using Python, reverse an integer, and tell if palindrome
13,059,540
3
2012-10-24T23:42:44Z
13,059,602
22
2012-10-24T23:51:07Z
[ "python", "string", "list", "main", "function" ]
Using Python, reverse an integer and determine if it is a palindrome. Here is my definition of reverse and palindrome. Do I have a correct logic? ``` def reverse(num): s=len(num) newnum=[None]*length for i in num: s=s-1 newnum[s]=i return newnum def palindrome(num): a=str(num) ...
``` def palindrome(num): return str(num) == str(num)[::-1] ```
Fast algorithm to detect main colors in an image?
13,060,069
7
2012-10-25T00:50:51Z
13,061,716
9
2012-10-25T04:46:52Z
[ "python", "algorithm", "colors", "python-imaging-library" ]
Does anyone know a fast algorithm to detect main colors in an image? I'm currently using k-means to find the colors together with Python's PIL but it's very slow. One 200x200 image takes 10 seconds to process. I've several hundred thousand images.
One fast method would be to simply divide up the color space into bins and then construct a histogram. It's fast because you only need a small number of decisions per pixel, and you only need one pass over the image (and one pass over the histogram to find the maxima). **Update:** here's a rough diagram to help explai...
Why Tor cant access localhost pages
13,060,096
5
2012-10-25T00:54:26Z
13,061,245
9
2012-10-25T03:45:47Z
[ "python", "proxy", "socks", "tor" ]
I have Tor running and a python script to get web pages: ``` socks.setdefaultproxy(socks.PROXY_TYPE_SOCKS5, "127.0.0.1", 9050) socket.socket = socks.socksocket print urllib2.urlopen(URL).read() ``` However, if the URL is ``` http://localhost/some_page.html ``` I get the following error: ``` raise Socks5Error(ord(...
It is the way protocol is designed. When you send a request, it is transported to another machine on Internet with Socks5 envelope. So actual request is made from external server, thus accessing 127.0.0.1 is not possible.
Efficiently find the range of an array in python?
13,060,458
5
2012-10-25T01:45:19Z
13,060,519
10
2012-10-25T01:55:08Z
[ "python", "performance", "range", "max", "min" ]
Is there an accepted efficient way to find the range (ie. max value - min value) of a list of numbers in python? I have tried using a loop and I know I can use the `min` and `max` functions with subtraction. I am just wondering if there is some kind of built-in that is faster.
If you really need high performance, try Numpy. The function [`numpy.ptp`](http://docs.scipy.org/doc/numpy/reference/generated/numpy.ptp.html) computes the range of values (i.e. `max - min`) across an array.
Getting values with the right type in Redis
13,060,632
13
2012-10-25T02:13:02Z
13,060,733
7
2012-10-25T02:30:19Z
[ "python", "types", "redis", "type-conversion" ]
I'm using redis in my python application to store simple values like counters and time stamp lists, but trying to get a counter and comparing it with a number i came across a problem. If i do: ``` import redis ... myserver = redis.Redis("localhost") myserver.set('counter', 5) ``` and then try to get that value like ...
Technically speaking you need to take care of that on your own. However, have a look at [this link](https://github.com/andymccurdy/redis-py), especially at the part of their README that refers to parsers and response callbacks, maybe that's something you can use. Question would be whether this is an overkill for you o...
Getting values with the right type in Redis
13,060,632
13
2012-10-25T02:13:02Z
17,635,214
9
2013-07-13T23:48:53Z
[ "python", "types", "redis", "type-conversion" ]
I'm using redis in my python application to store simple values like counters and time stamp lists, but trying to get a counter and comparing it with a number i came across a problem. If i do: ``` import redis ... myserver = redis.Redis("localhost") myserver.set('counter', 5) ``` and then try to get that value like ...
As @favoretti said, response callbacks will do the trick. It's not complicate at all, just one line and all will be taken care of. ``` In [2]: import redis In [3]: r = redis.Redis() In [10]: r.set_response_callback('HGET', float) In [11]: r.hget('myhash', 'field0') Out[11]: 4.6 ``` for `hmget`, it returns a list of s...
psycopg - INSERT gzipped data into bytea column
13,061,358
5
2012-10-25T03:59:18Z
13,061,402
14
2012-10-25T04:05:15Z
[ "python", "postgresql", "psycopg2" ]
I'm trying to gzip a string and then write it into a `bytea` column using [psycopg2](http://www.initd.org/psycopg/). **table:** ``` CREATE TABLE test ( data bytea ) ``` **insert:** ``` import psycopg2 data = "some string".encode("zlib") # 'x\x9c+\xce\xcfMU(.)\xca\xccK\x07\x00\x1ak\x04l' conn = psycopg2.connect(...
If you want to insert binary data into the database, you will need to use the psycopg2.Binary() wrapper. Using a string like you've done will cause the data to be treated as text, which will either be rejected due to encoding issues, or accepted but mangled when you try to read it again. Try replacing the last execute...
error of install numpy on linux red hat
13,061,379
12
2012-10-25T04:01:11Z
14,002,944
13
2012-12-22T12:45:00Z
[ "python", "linux", "numpy", "scipy" ]
I am trying to install numpy from <http://www.scipy.org/Download> . by `git clone git://github.com/numpy/numpy.git numpy` But, when I ran `python setup.py install` I got: `SystemError: Cannot compile 'Python.h'. Perhaps you need to install python-dev|python-devel` Where to get python-dev ? I tried: ``` $ easy_in...
If you are in Ubuntu(e.g. Ubuntu 12.04), it is very easy, ``` sudo apt-get install python-numpy ``` or you can compile from source through pip(I think on RedHat almost the same): ``` sudo apt-get install python-dev sudo apt-get install python-pip pip install numpy ```
Change a pandas DataFrame column value based on another column value
13,061,478
3
2012-10-25T04:13:43Z
13,062,410
9
2012-10-25T05:54:10Z
[ "python", "dataframe", "pandas" ]
I have a dataframe with two columns each of which represents an organism. They are called ORG1 and ORG2 I want to move the values of ORG2 into ORG1 for the corresponding index value. So, if ORG1 is 'A' and ORG2 is 'B' I want ORG1 to take the value 'B' from ORG2. I have already started work to identify indexes of the ...
``` In [13]: df Out[13]: ORG1 ORG2 0 A ESBL 1 B P 2 C Q 3 D R 4 E ESBL In [14]: cond = df.ORG2 == 'ESBL' In [15]: df.ORG1[cond] = df.ORG2[cond] In [16]: df Out[16]: ORG1 ORG2 0 ESBL ESBL 1 B P 2 C Q 3 D R 4 ESBL ESBL ```
convert a dict to sorted dict in python
13,062,300
4
2012-10-25T05:45:02Z
13,062,357
10
2012-10-25T05:49:36Z
[ "python", "pandas", "sorteddictionary" ]
I want to convert a dict into sorted dict in python ``` data = pandas.read_csv('D:\myfile.csv') for colname, dtype in data.dtypes.to_dict().iteritems(): if dtype == 'object': print colname count = data[colname].value_counts() d = dict((str(k), int(v)) for k, v in count.iteritems()) ...
You cannot sort a `dict` because dictionary has no ordering. Instead, use [`collections.OrderedDict`](http://docs.python.org/library/collections.html#collections.OrderedDict): ``` >>> from collections import OrderedDict >>> d = {'Gears of war 3': 6, 'Batman': 5, 'gears of war 3': 4, 'Rocksmith': 5, 'Madden': 3} >>> ...
Is making in-place operations return the object a bad idea?
13,062,423
19
2012-10-25T05:55:12Z
13,574,153
8
2012-11-26T22:20:40Z
[ "python", "coding-style", "mutable", "mutability" ]
I'm talking mostly about Python here, but I suppose this probably holds for most languages. If I have a mutable object, is it a bad idea to make an in-place operation also return the object? It seems like most examples just modify the object and return `None`. For example, `list.sort`.
Returning the modified object from the method that modified it can have some benefits, but is not recommended in Python. Returning `self` after a modification operation will allow you to perform [method chaining](https://en.wikipedia.org/wiki/Method_chaining) on the object, which is a convenient way of executing severa...
Is making in-place operations return the object a bad idea?
13,062,423
19
2012-10-25T05:55:12Z
13,574,259
23
2012-11-26T22:29:09Z
[ "python", "coding-style", "mutable", "mutability" ]
I'm talking mostly about Python here, but I suppose this probably holds for most languages. If I have a mutable object, is it a bad idea to make an in-place operation also return the object? It seems like most examples just modify the object and return `None`. For example, `list.sort`.
Yes, it is a bad idea. The reason is that if in-place and non-in-place operations have apparently identical output, then programmers will frequently mix up in-place operations and non-in-place operations (`List.sort()` vs. `sorted()`) and that results in hard-to-detect errors. In-place operations returning themselves ...
How to show the whole image when using OpenCV warpPerspective
13,063,201
13
2012-10-25T06:57:17Z
20,355,545
20
2013-12-03T15:46:56Z
[ "python", "image-processing", "opencv", "numpy", "computer-vision" ]
I have 2 test images here. My is question is, how to map the square in first image to the quadrilateral in the second image without cropping the image. Image 1: ![image 1](http://i.stack.imgur.com/yfod7.png) Image 2: ![image 2](http://i.stack.imgur.com/Fe3Ug.png) Here is my current code using openCV warpPerspective ...
My solution is to calculate the result image size, and then do a translation. ``` def warpTwoImages(img1, img2, H): '''warp img2 to img1 with homograph H''' h1,w1 = img1.shape[:2] h2,w2 = img2.shape[:2] pts1 = float32([[0,0],[0,h1],[w1,h1],[w1,0]]).reshape(-1,1,2) pts2 = float32([[0,0],[0,h2],[w2,h...
DeprecationWarning: BaseException.message has been deprecated as of Python 2.6 exception.__class__, exception.message,
13,063,212
9
2012-10-25T06:58:19Z
13,063,924
21
2012-10-25T07:46:42Z
[ "python", "exception", "python-2.6", "deprecation-warning" ]
Can anyone tell me the actual reason behind the warning I am getting in this Django middleware, and how can I solve this? I am getting this message "*DeprecationWarning: BaseException.message has been deprecated as of Python 2.6 exception.**class**, exception.message,*" ``` class GeneralMiddleware(object): def pr...
If I remember correctly, when Python switched to the new raise syntax in 2.5(?), they got rid of the `message` member in favor of an `args` tuple. For backward compatibility, `BaseException.message` is effectively the same thing as `BaseException.args[0] if BaseException.args else None`, but you shouldn't use it in new...
Downloading the files from s3 recursively using boto python.
13,063,474
14
2012-10-25T07:16:00Z
13,063,610
20
2012-10-25T07:25:57Z
[ "python", "amazon-s3", "amazon-web-services", "boto" ]
I have a bucket in s3, which has deep directory structure. I wish I could download them all at once. My files look like this : ``` foo/bar/1. . foo/bar/100 . . ``` Are there any ways to download these files recursively from the s3 bucket using boto lib in python? Thanks in advance.
You can download all files in a bucket like this (untested): ``` from boto.s3.connection import S3Connection conn = S3Connection('your-access-key','your-secret-key') bucket = conn.get_bucket('bucket') for key in bucket.list(): try: res = key.get_contents_to_filename(key.name) except: logging.i...
Applying a function to values in dict
13,063,691
18
2012-10-25T07:31:49Z
13,063,716
25
2012-10-25T07:33:48Z
[ "python", "dictionary" ]
I want to apply a function to all values in dict and store that in a separate dict. I am just trying to see how I can play with python and want to see how I can rewrite something like this ``` for i in d: d2[i] = f(d[i]) ``` to something like ``` d2[i] = f(d[i]) for i in d ``` The first way of writing it is of ...
If you're using Python 2.7 or 3.x: ``` d2 = {k: f(v) for k, v in d1.items()} ``` Which is equivalent to: ``` d2 = {} for k, v in d1.items(): d2[k] = f(v) ``` Otherwise: ``` d2 = dict((k, f(v)) for k, v in d1.items()) ```
Python bottle runs initialization method twice
13,064,490
4
2012-10-25T08:23:08Z
13,064,594
7
2012-10-25T08:30:09Z
[ "python", "web-applications", "bottle" ]
I've got a problem with bottle, the `_initialize` function is run twice. Example app: ``` @route("/index") def index(): return "bang" def _initialize(): print("bam") if __name__ == "__main__": _initialize() run(reloader=True, host="localhost", port = 8990) ``` The output is: ``` bam bam B...
The problem is the `reloader=True` argument for the `run` function. See <http://bottlepy.org/docs/dev/tutorial.html#auto-reloading> for the sentence: > All module-level code is executed at least twice! Be careful.
Double-indexed dictionary
13,065,426
9
2012-10-25T09:21:34Z
13,065,439
16
2012-10-25T09:22:42Z
[ "python", "dictionary" ]
I want to be able to store and look up values in a dictionary based on two integer values. So when I look up a value I want to use the keys `read_length` and `min_size` to access the element, like so: ``` number_of_read_lengths[read_length][min_size] ``` I know I can create nested dictionaries, but that is a slight ...
You can use any immutable and hashable object as key, including tuples ``` number_of_read_lengths = {} number_of_read_lengths[14,3] = "Your value" ```
Is there a way to secure strings for Python's eval?
13,066,594
7
2012-10-25T10:28:10Z
13,066,657
8
2012-10-25T10:31:45Z
[ "python", "security", "eval" ]
There are many questions on SO about using Python's eval on **insecure strings** (eg.: [Security of Python's eval() on untrusted strings?](http://stackoverflow.com/questions/661084/security-of-pythons-eval-on-untrusted-strings), [Python: make eval safe](http://stackoverflow.com/questions/3513292/python-make-eval-safe) ...
No, there isn't, or at least, not a sensible, truly secure way. Python is a highly dynamic language, and the flipside of that is that it's very easy to subvert any attempt to lock the language down. You either need to write your own parser for the subset you want, or use something existing, like `ast.literal_eval()`, ...
Is there a way to secure strings for Python's eval?
13,066,594
7
2012-10-25T10:28:10Z
13,284,815
9
2012-11-08T07:58:50Z
[ "python", "security", "eval" ]
There are many questions on SO about using Python's eval on **insecure strings** (eg.: [Security of Python's eval() on untrusted strings?](http://stackoverflow.com/questions/661084/security-of-pythons-eval-on-untrusted-strings), [Python: make eval safe](http://stackoverflow.com/questions/3513292/python-make-eval-safe) ...
Here you have a working "exploit" with your restrictions in place - only contains lower case ascii chars or any of the signs +-\*/() . It relies on a 2nd eval layer. ``` def mask_code( python_code ): s="+".join(["chr("+str(ord(i))+")" for i in python_code]) return "eval("+s+")" bad_code='''__import__("os").ge...
Read a local file in django
13,067,107
4
2012-10-25T10:58:25Z
13,067,290
13
2012-10-25T11:09:17Z
[ "python", "django", "path" ]
I'm quite stuck on this one! I am writing a Django view that reads data from an external database. To do this, I am using the standard MySQLdb library. Now, to load the data, I must do a very long and complex query. I can hard code that query in my view and that works just fine. But I think that is not practical; I wan...
Keep the file in django project root and add the following in the settings.py file. ``` PROJECT_ROOT = os.path.abspath(os.path.dirname(__file__)) ``` Then in the view do this. ``` import os from django.conf.settings import PROJECT_ROOT file_ = open(os.path.join(PROJECT_ROOT, 'filename')) ```
Python: Getting the max value of y from a list of objects
13,067,615
11
2012-10-25T11:29:54Z
13,067,638
7
2012-10-25T11:31:20Z
[ "python", "list", "max" ]
I have this list of objects wich have a x and a y parameter (and some other stuff). ``` path.nodes = ( <GSNode x=535.0 y=0.0 GSLINE GSSHARP>, <GSNode x=634.0 y=0.0 GSLINE GSSHARP>, <GSNode x=377.0 y=706.0 GSLINE GSSHARP>, <GSNode x=279.0 y=706.0 GSLINE GSSHARP>, <GSNode x=10.0 y=0.0 GSLINE GSSHARP>...
There's a built-in to help with this case. ``` import operator print max(path.nodes, key=operator.attrgetter('y')) ``` Alternatively: ``` print max(path.nodes, key=lambda item: item.y) ``` Edit: But Mark Byers' answer is most Pythonic. ``` print max(node.y for node in path.nodes) ```
Python: Getting the max value of y from a list of objects
13,067,615
11
2012-10-25T11:29:54Z
13,067,652
20
2012-10-25T11:32:29Z
[ "python", "list", "max" ]
I have this list of objects wich have a x and a y parameter (and some other stuff). ``` path.nodes = ( <GSNode x=535.0 y=0.0 GSLINE GSSHARP>, <GSNode x=634.0 y=0.0 GSLINE GSSHARP>, <GSNode x=377.0 y=706.0 GSLINE GSSHARP>, <GSNode x=279.0 y=706.0 GSLINE GSSHARP>, <GSNode x=10.0 y=0.0 GSLINE GSSHARP>...
To get just the maximum value and not the entire object you can use a generator expression: ``` print max(node.y for node in path.nodes) ```
Python SyntaxError :'return' outside function
13,068,043
4
2012-10-25T11:56:18Z
13,068,072
9
2012-10-25T11:58:24Z
[ "python" ]
Compiler showed: ``` File "temp.py", line 56 return result SyntaxError: 'return' outside function ``` Where was I wrong? ``` class Complex (object): def __init__(self, realPart, imagPart): self.realPart = realPart self.imagPart = imagPart def __str__(self): if type(se...
I would check my indentation, it looks off. Are you possibly mixing tabs and spaces? The [PEP8 (Python Style Guide)](http://www.python.org/dev/peps/pep-0008/) recommends using [4 spaces only](http://www.python.org/dev/peps/pep-0008/#tabs-or-spaces). Unlike other languages, whitepace makes a big difference in Python, so...
Multiprocessing scikit-learn
13,068,257
9
2012-10-25T12:10:03Z
13,082,746
12
2012-10-26T07:36:25Z
[ "python", "multithreading", "numpy", "machine-learning", "scikit-learn" ]
I got linearsvc working against training set and test set using `load_file` method i am trying to get It working on Multiprocessor enviorment. How can i get multiprocessing work on `LinearSVC().fit()` `LinearSVC().predict()`? I am not really familiar with datatypes of scikit-learn yet. I am also thinking about splitt...
I think using SGDClassifier instead of LinearSVC for this kind of data would be a good idea, as it is much faster. For the vectorization, I suggest you look into the [hash transformer PR](https://github.com/scikit-learn/scikit-learn/pull/909). For the multiprocessing: You can distribute the data sets across cores, do ...
Multiprocessing scikit-learn
13,068,257
9
2012-10-25T12:10:03Z
13,084,224
10
2012-10-26T09:24:50Z
[ "python", "multithreading", "numpy", "machine-learning", "scikit-learn" ]
I got linearsvc working against training set and test set using `load_file` method i am trying to get It working on Multiprocessor enviorment. How can i get multiprocessing work on `LinearSVC().fit()` `LinearSVC().predict()`? I am not really familiar with datatypes of scikit-learn yet. I am also thinking about splitt...
For linear models (`LinearSVC`, `SGDClassifier`, `Perceptron`...) you can chunk your data, train independent models on each chunk and build an aggregate linear model (e.g. `SGDClasifier`) by sticking in it the average values of `coef_` and `intercept_` as attributes. The `predict` method of `LinearSVC`, `SGDClassifier`...
Parallelise python loop with numpy arrays and shared-memory
13,068,760
14
2012-10-25T12:37:24Z
13,093,515
16
2012-10-26T19:52:48Z
[ "python", "numpy", "parallel-processing", "multiprocessing", "shared-memory" ]
I am aware of several questions and answers on this topic, but haven't found a satisfactory answer to this particular problem: What is the easiest way to do a simple shared-memory parallelisation of a python loop where numpy arrays are manipulated through numpy/scipy functions? I am not looking for the most efficient...
With Cython parallel support: ``` # asd.pyx from cython.parallel cimport prange import numpy as np def foo(): cdef int i, j, n x = np.zeros((200, 2000), float) n = x.shape[0] for i in prange(n, nogil=True): with gil: for j in range(100): x[i,:] = np.cos(x[i,:]) ...
Efficient implementation for: "Python For Else Loop" in Java
13,069,402
15
2012-10-25T13:13:03Z
13,069,441
10
2012-10-25T13:15:49Z
[ "java", "python", "if-statement", "for-loop" ]
In Python there is an efficient for else loop implementation described [here](http://docs.python.org/tutorial/controlflow.html#break-and-continue-statements-and-else-clauses-on-loops) Example code: ``` for x in range(2, n): if n % x == 0: print n, 'equals', x, '*', n/x break else: # loop fell ...
When I need to do something like this, I typically try to break it out into a separate method - which can then return `true`/`false` if no extra information is needed, or possibly "the value found, or null if it's not found". It doesn't *always* work - it's very context-specific - but it's something worth trying. Then...
Efficient implementation for: "Python For Else Loop" in Java
13,069,402
15
2012-10-25T13:13:03Z
17,281,801
34
2013-06-24T17:51:53Z
[ "java", "python", "if-statement", "for-loop" ]
In Python there is an efficient for else loop implementation described [here](http://docs.python.org/tutorial/controlflow.html#break-and-continue-statements-and-else-clauses-on-loops) Example code: ``` for x in range(2, n): if n % x == 0: print n, 'equals', x, '*', n/x break else: # loop fell ...
It's done like this: ``` class A { public static void main(String[] args) { int n = 13; found: { for (int x : new int[]{2,3,4,5,6,7,8,9,10,11,12}) if (n % x == 0) { System.out.println("" + n + " equals " + x + "*" + (n/x)); break f...
Python daemon and systemd service
13,069,634
27
2012-10-25T13:25:10Z
13,082,597
13
2012-10-26T07:25:18Z
[ "python", "python-daemon", "systemd" ]
I have simple Python script with works as a daemon. I am trying to create systemd script to be able to start this script during startup. Current systemd script: ``` [Unit] Description=Text After=syslog.target [Service] Type=forking User=node Group=node WorkingDirectory=/home/node/Node/ PIDFile=/var/run/zebra.pid Exe...
You're not creating the PID file. systemd expects your program to write its PID in `/var/run/zebra.pid`. As you don't do it, systemd probably thinks that your program is failing, hence deactivating it. To add the PID file, install [lockfile](http://pypi.python.org/pypi/lockfile/) and change your code to this: ``` im...
Python daemon and systemd service
13,069,634
27
2012-10-25T13:25:10Z
21,388,697
12
2014-01-27T18:28:31Z
[ "python", "python-daemon", "systemd" ]
I have simple Python script with works as a daemon. I am trying to create systemd script to be able to start this script during startup. Current systemd script: ``` [Unit] Description=Text After=syslog.target [Service] Type=forking User=node Group=node WorkingDirectory=/home/node/Node/ PIDFile=/var/run/zebra.pid Exe...
It is possible to daemonize like Schnouki and Amit describe. But with systemd this is not necessary. There are two nicer ways to initialize the daemon: socket-activation and explicit notification with sd\_notify(). Socket activation works for daemons which want to listen on a network port or UNIX socket or similar. Sy...
Python daemon and systemd service
13,069,634
27
2012-10-25T13:25:10Z
30,189,540
30
2015-05-12T11:29:02Z
[ "python", "python-daemon", "systemd" ]
I have simple Python script with works as a daemon. I am trying to create systemd script to be able to start this script during startup. Current systemd script: ``` [Unit] Description=Text After=syslog.target [Service] Type=forking User=node Group=node WorkingDirectory=/home/node/Node/ PIDFile=/var/run/zebra.pid Exe...
The reason, it does not complete the startup sequence is, that for Type `forking` your startup process is expected to fork and exit (see $ man systemd.service - search for forking). # Simply use only the main process, do not daemonize One option is to do less. With systemd, there is often no need to create daemons an...
Get index of the top n values of a list in python
13,070,461
19
2012-10-25T14:08:25Z
13,070,505
37
2012-10-25T14:10:51Z
[ "python" ]
I have a list say `a = [5,3,1,4,10]`. I need to get a index of top two values of the list viz 5 and 10. Is there a one-liner that python offers for such a case?
``` sorted(range(len(a)), key=lambda i: a[i])[-2:] ``` or ``` sorted(range(len(a)), key=lambda i: a[i], reverse=True)[:2] ``` or ``` zip(*sorted(enumerate(a), key=operator.itemgetter(1)))[0][-2:] ``` or (for long lists) ``` zip(*heapq.nlargest(2, enumerate(a), key=operator.itemgetter(1)))[0] ```
flask jinja macros variable in url_for
13,071,275
3
2012-10-25T14:50:31Z
13,071,388
7
2012-10-25T14:56:38Z
[ "python", "flask", "jinja2", "jinja" ]
I have a flask app with a jinja macro that looks like that ``` {% macro icon(site, title="") %} <img src="{{ url_for('static', filename="icons/XXX.png") }}" alt="{{ title }}" class="img-icon"> {% endmacro %} ``` What I need to do is have the filename equals to the `site` variable passed to the macro. so instead o...
This should work: ``` {% macro icon(site, title="") %} <img src="{{ url_for('static', filename='icons/%s.png' % site) }}" alt="{{ title }}" class="img-icon"> {% endmacro %} ```
Python - Ceil a datetime to next quarter of an hour
13,071,384
11
2012-10-25T14:56:25Z
13,071,569
7
2012-10-25T15:05:24Z
[ "python", "math", "datetime", "ceil" ]
Let's imagine this datetime ``` >>> import datetime >>> dt = datetime.datetime(2012, 10, 25, 17, 32, 16) ``` I'd like to ceil it to the next quarter of hour, in order to get ``` datetime.datetime(2012, 10, 25, 17, 45) ``` I imagine something like ``` >>> quarter = datetime.timedelta(minutes=15) >>> import math >>>...
``` def ceil(dt): if dt.minute % 15 or dt.second: return dt + datetime.timedelta(minutes = 15 - dt.minute % 15, seconds = -(dt.second % 60)) else: return dt ``` This gives you: ``` >>> ceil(datetime.datetime(2012,10,25, 17,45)) datetime.datetime(2012, 10,...
Python - Ceil a datetime to next quarter of an hour
13,071,384
11
2012-10-25T14:56:25Z
13,071,613
12
2012-10-25T15:07:46Z
[ "python", "math", "datetime", "ceil" ]
Let's imagine this datetime ``` >>> import datetime >>> dt = datetime.datetime(2012, 10, 25, 17, 32, 16) ``` I'd like to ceil it to the next quarter of hour, in order to get ``` datetime.datetime(2012, 10, 25, 17, 45) ``` I imagine something like ``` >>> quarter = datetime.timedelta(minutes=15) >>> import math >>>...
This one takes microseconds into account! ``` import math def ceil_dt(dt): # how many secs have passed this hour nsecs = dt.minute*60 + dt.second + dt.microsecond*1e-6 # number of seconds to next quarter hour mark # Non-analytic (brute force is fun) way: # delta = next(x for x in xrange(0,36...
Transforming Pandas dataframe
13,072,259
6
2012-10-25T15:41:32Z
13,072,686
11
2012-10-25T16:06:06Z
[ "python", "pandas" ]
I'm having a little trouble with this maybe someone could direct me in the right direction here. Suppose I have a data frame that looks as follows (actual dataset has many more entries and idents): ``` open ident 2011-01-01 00:00:00 -1.252090 df1 2011-01-01 01:00:00 -1.427444 df1 2011-01-...
You can use the `pivot` function: ``` df.pivot(index='date', columns='variable', values='value') ``` For more info see: <http://pandas.pydata.org/pandas-docs/stable/reshaping.html>
How to mock python's datetime.now() in a class method for unit testing?
13,073,281
21
2012-10-25T16:41:23Z
13,073,350
16
2012-10-25T16:46:01Z
[ "python", "django", "unit-testing", "testing", "mocking" ]
I'm trying to write tests for a class that has methods like: ``` import datetime import pytz class MyClass: def get_now(self, timezone): return datetime.datetime.now(timezone) def do_many_things(self, tz_string='Europe/London'): tz = pytz.timezone(tz_string) localtime_now = self.get_n...
You'd create a function that returns a specific datetime, localized to the timezone passed in: ``` import mock def mocked_get_now(timezone): dt = datetime.datetime(2012, 1, 1, 10, 10, 10) return timezone.localize(dt) @mock.patch('path.to.your.models.MyClass.get_now', side_effect=mocked_get_now) def your_test...
How to mock python's datetime.now() in a class method for unit testing?
13,073,281
21
2012-10-25T16:41:23Z
30,169,148
14
2015-05-11T13:36:22Z
[ "python", "django", "unit-testing", "testing", "mocking" ]
I'm trying to write tests for a class that has methods like: ``` import datetime import pytz class MyClass: def get_now(self, timezone): return datetime.datetime.now(timezone) def do_many_things(self, tz_string='Europe/London'): tz = pytz.timezone(tz_string) localtime_now = self.get_n...
You could use [freezegun](https://github.com/spulec/freezegun) : ``` from freezegun import freeze_time def test(): assert datetime.datetime.now() != datetime.datetime(2012, 01, 14) with freeze_time("2012-01-14"): assert datetime.datetime.now() == datetime.datetime(2012, 01, 14) assert datetime.dat...
Java and python ^ operator
13,073,957
3
2012-10-25T17:25:13Z
13,073,997
15
2012-10-25T17:27:45Z
[ "java", "python", "operators" ]
For a CompSci class, we were reviewing the Java Math class. Being the foolish programmer that I am, I tried using the ^ operator instead of the Math.pow function. Surprise, Surprise, it did not work. But, what Java spit out, is my question. I am trying to figure out the operation that is being done with the numbers. Yo...
This is a *bitwise* operation, and thus it operates on the binary bits of your numbers. 6 is `110` in binary form. 5 is `101` in binary form. ``` 110 101 === (^ xor) 011 ``` `011` is 3 in binary. Read up on <https://en.wikipedia.org/wiki/Exclusive_or>
TypeError 'x' object has no attribute '__getitem__'
13,074,331
12
2012-10-25T17:51:11Z
13,074,385
29
2012-10-25T17:54:17Z
[ "python", "django", "typeerror" ]
Im getting the error > ``` > 'CampSite' object has no attribute '__getitem__' > ``` when I save a new CampCon entry in the admin interface. I have one application called campsites that handles the database of campsites, and I have another application called content that handles reviews. I am very new to Django and th...
Your issue is that your `__unicode__` functions are returning model objects when they need to be returning unicode strings. You can achieve this by adding the `unicode()` function to your `__unicode__` methods: ``` class CampCon(models.Model): campsite = models.ForeignKey(CampSite) trip = models.ForeignKey('T...
Extracting selected columns from a table using BeautifulSoup
13,074,586
7
2012-10-25T18:08:24Z
13,074,920
16
2012-10-25T18:30:49Z
[ "python", "html-parsing", "beautifulsoup" ]
I am trying to extract the first and third columns of [this data table](http://www.samhsa.gov/data/NSDUH/2k10State/NSDUHsae2010/NSDUHsaeAppC2010.htm#tabC.7) using BeautifulSoup. From looking at the HTML the first column has a `<th>` tag. The other column of interest has as `<td>` tag. In any case, all I've been able to...
You can try this code: ``` import urllib2 from BeautifulSoup import BeautifulSoup url = "http://www.samhsa.gov/data/NSDUH/2k10State/NSDUHsae2010/NSDUHsaeAppC2010.htm" soup = BeautifulSoup(urllib2.urlopen(url).read()) for row in soup.findAll('table')[0].tbody.findAll('tr'): first_column = row.findAll('th')[0].con...
Catching exception in context manager __enter__()
13,074,847
13
2012-10-25T18:25:56Z
13,075,071
11
2012-10-25T18:38:44Z
[ "python", "exception", "python-2.7", "with-statement", "contextmanager" ]
Is it possible to ensure the `__exit__()` method is called even if there is an exception in `__enter__()`? ``` >>> class TstContx(object): ... def __enter__(self): ... raise Exception('Oops in __enter__') ... ... def __exit__(self, e_typ, e_val, trcbak): ... print "This isn't running" ... >>> with...
Like this: ``` import sys class Context(object): def __enter__(self): try: raise Exception("Oops in __enter__") except: # Swallow exception if __exit__ returns a True value if self.__exit__(*sys.exc_info()): pass else: ...
default value of parameter as result of instance method
13,075,044
8
2012-10-25T18:37:47Z
13,075,096
15
2012-10-25T18:40:28Z
[ "python" ]
I would like to initialize method parameter by some default value, if explicit value was not passing in the method. Something like this: ``` class Example def __init__(self, data = self.default_data()): self.data = data def default_data(): # .... return something ``` But I get the error: ```...
The common idiom here is to set the default to some sentinel value (`None` is typical, although [some have suggested `Ellipsis`](http://stackoverflow.com/questions/6185475/custom-placeholder-like-none-in-python/6186450#6186450) for this purpose) which you can then check. ``` class Example(object): #inherit from object...
Move "help" to a different Argument Group in python argparse
13,075,241
18
2012-10-25T18:50:05Z
13,075,485
19
2012-10-25T19:06:17Z
[ "python", "argparse" ]
Currently I'm creating a directory reader program using Python. I'm using 'argparse' to parse the arguments from command line. I have the following code: ``` parser = argparse.ArgumentParser(prog = "LS.py", usage = "%(prog)s [options] [path1 [path2 [...pathN]]]\nThe paths are optional;...
You can use `add_help=False` to disable the built-in help command and add your own instead, using `action="help"` (thanks @mgilson!) To get rid of the spaces, don't set `metavar` to an empty string. Your options should be specified using `action="store_true"` to make them true (argument-less) options: ``` import argp...
typeerror 'builtin_function_or_method' object has no attribute '__getitem__'
13,075,632
15
2012-10-25T19:16:59Z
13,075,688
46
2012-10-25T19:20:02Z
[ "python", "typeerror" ]
Here's the code: ``` The_Start = [1,1] The_End = [1, 1] for z in range(20): for x in range(len(The_Start) - 1): y = The_Start[x] + The_Start[x + 1] The_End.insert[x + 1, y] print The_End The_Start = The_End The_End = [1, 1] ``` This code is supposed to make a Pascal's triangle. The er...
You need to change the brackets in `The_End.insert[x + 1, y]` to parenthesis. ``` The_End.insert(x + 1, y) ``` It's good practice in Python to use lowercase variable names. Uppercase is generaly used for classes.
typeerror 'builtin_function_or_method' object has no attribute '__getitem__'
13,075,632
15
2012-10-25T19:16:59Z
13,075,703
10
2012-10-25T19:21:09Z
[ "python", "typeerror" ]
Here's the code: ``` The_Start = [1,1] The_End = [1, 1] for z in range(20): for x in range(len(The_Start) - 1): y = The_Start[x] + The_Start[x + 1] The_End.insert[x + 1, y] print The_End The_Start = The_End The_End = [1, 1] ``` This code is supposed to make a Pascal's triangle. The er...
You need parenthesis instead of `[]`: ``` The_End.insert(x + 1, y) ```
ASCII art in Python [UPDATED]
13,076,194
16
2012-10-25T19:54:35Z
13,076,368
13
2012-10-25T20:05:03Z
[ "python", "ascii" ]
I'm pretty new to python, picked it up as an hobby interest, and through some searching found myself a bunch of exercises from "*The Practice of computing*", one of them asks about writing an ASCII figure, like the one denoted below. ![ascii cross](http://i.stack.imgur.com/aVNGc.png) It all seems like an easy enough ...
Think about the difference between 1 and 2. Try to draw by hand what 3 and 4 should look like to make the sequence work. Think about it like one of those problems where you are given the start of a sequence and you have to work our the rest. Like: 0 1 1 2 3 5 8 13 If you don't recognize that right off, it is the Fib...
Get the indexes of truthy elements of a boolean list as a list/tuple
13,076,560
5
2012-10-25T20:16:21Z
13,076,574
11
2012-10-25T20:17:44Z
[ "python", "json", "list" ]
Given a boolean list such as `[True, False, False, True, False, True]`, what is the *quickest* way to get a list/tuple containing the indexes (starting from 1, not zero-indexed) of the Truthy elements in the original list? So for the list above, it should returns `[1, 4, 6]` or `(1, 4, 6)`. I was using a generator lik...
``` [i for i, elem in enumerate(bool_list, 1) if elem] ```
How do I create a Tiling layout / Flow layout in TkInter?
13,076,668
5
2012-10-25T20:24:01Z
13,076,829
7
2012-10-25T20:35:05Z
[ "python", "tkinter", "tk", "flowlayout" ]
I want to to fill my window with, say, labels and I want them to wrap once the column would be bigger than the current window (or rather parent frame) size. I've tried using the `grid` layout, but then I have to calculate the size of the content of each row myself, to know when to put the next element in the next row....
What I do when I want something like this is use the text widget for a container. The text widget can have embedded widgets, and they wrap just like text. As long as your widgets are all the same height the effect is pretty nice. For example (cut and pasted from the question at the author's request): ``` textwidget =...
PyMongo import Connection - causes ImportError
13,077,446
4
2012-10-25T21:18:49Z
13,085,050
12
2012-10-26T10:19:46Z
[ "python", "mongodb", "import", "pymongo" ]
I'm calling the following simple script to connect to a mongo database via Python. This is an example from the [10gen education course M101 - MongoDB for Developers](https://education.10gen.com/courses/10gen/M101/2012_Fall/about), and according to the forums I'm not the only person who has this issue. ``` import pymo...
Make sure there are no files called `pymongo.py` or `pymongo.pyc` in the path you are executing the script from. I named my test script `pymongo.py`, which caused Python to try and import Connection from that same file. Renaming it to `pymongo-test.py` and removing the automatically created `pymongo.pyc` solved the iss...
Is there a numpy.delete() equivalent for sparse matrices?
13,077,527
13
2012-10-25T21:24:32Z
13,078,768
11
2012-10-25T23:21:58Z
[ "python", "numpy", "scipy" ]
Let's say I have a 2-dimensional matrix as a numpy array. If I want to delete rows with specific indices in this matrix, I use [`numpy.delete()`](http://docs.scipy.org/doc/numpy/reference/generated/numpy.delete.html?highlight=delete#numpy.delete). Here is an example of what I mean: ``` In [1]: my_matrix = numpy.array(...
For CSR, this is probably the most efficient way to do it in-place: ``` def delete_row_csr(mat, i): if not isinstance(mat, scipy.sparse.csr_matrix): raise ValueError("works only for CSR format -- use .tocsr() first") n = mat.indptr[i+1] - mat.indptr[i] if n > 0: mat.data[mat.indptr[i]:-n] =...
How do I remove the last character of an R-T-L string in python?
13,078,327
6
2012-10-25T22:31:12Z
13,078,474
8
2012-10-25T22:45:52Z
[ "python", "string", "unicode", "right-to-left" ]
I am trying to remove the last character of a string in a "right-to-left" language. When I do, however, the last character wraps to the beginning of the string. e.g. `ותֵיהֶם]׃` becomes `ותֵיהֶם]` I know that this is a fundamental issue with how I'm handling the R-T-L paradigm, but if someone could help...
Some characters in Unicode are always LTR, some are always RTL, and some can be either depending on their surrounding context. In addition, the display context for bidirectional text will have a "predominant" directionality (e.g. a text editor configured for mainly-English text would be predominantly LTR and have a rag...
Merge Columns within a DataFrame that have the Same Name
13,078,751
5
2012-10-25T23:19:21Z
13,083,900
10
2012-10-26T09:02:36Z
[ "python", "pandas" ]
If I have a dataframe that has columns that include the same name, is there a way to combine the columns that have the same name with some sort of function (i.e. sum)? For instance with: ``` In [186]: df["NY-WEB01"].head() Out[186]: NY-WEB01 NY-WEB01 DateTime 2012-10-18 16:00:00 5.6 2.8 2012-10-18 17...
I believe this does what you are after: ``` df.groupby(lambda x:x, axis=1).sum() ``` Alternatively, between 3% and 15% faster depending on the length of the df: ``` df.groupby(df.columns, axis=1).sum() ``` EDIT: To extend this beyond sums, use `.agg()` (short for `.aggregate()`): ``` df.groupby(df.columns, axis=1)...
Switching user in Fabric
13,080,643
17
2012-10-26T04:16:49Z
13,092,755
10
2012-10-26T18:56:00Z
[ "python", "fabric" ]
I have a problem when using Fabric to mimic my SSH workflow to deploy my web application. Here's my usual flow of commands when I SSH to a server: 1. SSH using root user. ssh root@1.2.3.4 2. Switch to web user: su - web 3. Change directory: cd /srv/web/prod/abc\_project 4. Start virtualenv: workon abc\_env 5. Perform...
First of all, you should use `sudo` when executing commands under another user. Second, `workon` sets environment variables for current shell. Since fabric invokes new shell for every command, you should run `workon rhino_env` in every command, where you need virtualenv (i.e. as prefix). With this edits yor code should...
The difference between three single quote'd and three double quote'd docstrings in python
13,081,178
4
2012-10-26T05:22:53Z
13,081,214
7
2012-10-26T05:26:19Z
[ "python" ]
I was just wondering what is the difference between two ways of writing python docstrings (`__doc__`): 1. three single quotes: ``` ''' Comment goes here ''' ``` 2. three double quotes: ``` """ Comment goes here """ ``` Is there any subtle difference in the way doc string could be forma...
No. They are the same. The only difference is that the first one can contain a sequence of three unescaped double quotes, while the second can contain a sequence of three unescaped single quotes. (In other words, because the delimiters are different, there is a slight difference in what characters you can use inside th...
How to return json using Flask web framework
13,081,532
107
2012-10-26T05:56:47Z
13,081,686
56
2012-10-26T06:11:55Z
[ "python", "json", "flask", "web-frameworks" ]
My aim is to do data summary in python using Pandas and return the summary in the form of JSON. I am using the Flask web framework to return JSON. My code to get JSON is as follows:(excluding libraries) ``` data = pandas.read_csv('D:\myfile.csv') for colname, dtype in data.dtypes.to_dict().iteritems(): if dtype =...
See the documentation of: [flask.jsonify](http://flask.pocoo.org/docs/0.10/api/#flask.json.jsonify) ``` @app.route('/_get_current_user') def get_current_user(): return jsonify(username=g.user.username, email=g.user.email, id=g.user.id) ``` Returns: ``` { "username": "adm...
How to return json using Flask web framework
13,081,532
107
2012-10-26T05:56:47Z
13,089,975
166
2012-10-26T15:33:57Z
[ "python", "json", "flask", "web-frameworks" ]
My aim is to do data summary in python using Pandas and return the summary in the form of JSON. I am using the Flask web framework to return JSON. My code to get JSON is as follows:(excluding libraries) ``` data = pandas.read_csv('D:\myfile.csv') for colname, dtype in data.dtypes.to_dict().iteritems(): if dtype =...
If `f` is your dictionary, you can just do ``` return flask.jsonify(**f) ```
How to return json using Flask web framework
13,081,532
107
2012-10-26T05:56:47Z
20,405,740
8
2013-12-05T16:44:35Z
[ "python", "json", "flask", "web-frameworks" ]
My aim is to do data summary in python using Pandas and return the summary in the form of JSON. I am using the Flask web framework to return JSON. My code to get JSON is as follows:(excluding libraries) ``` data = pandas.read_csv('D:\myfile.csv') for colname, dtype in data.dtypes.to_dict().iteritems(): if dtype =...
It looks like no one answered how to identify the filename in your /summary route. It looks like you want the user to input a csv file and return a summary via json. The Flask [Quickstart](http://flask.pocoo.org/docs/quickstart/) guide shows how to get files from users and access them. Briefly, you need to use the requ...
How to return json using Flask web framework
13,081,532
107
2012-10-26T05:56:47Z
26,961,568
53
2014-11-16T20:16:47Z
[ "python", "json", "flask", "web-frameworks" ]
My aim is to do data summary in python using Pandas and return the summary in the form of JSON. I am using the Flask web framework to return JSON. My code to get JSON is as follows:(excluding libraries) ``` data = pandas.read_csv('D:\myfile.csv') for colname, dtype in data.dtypes.to_dict().iteritems(): if dtype =...
`jsonify` is the right way of doing this but if you want to have full control of how your data will be serialized to JSON you can build yourself response (with `status=200` and `mimetype="application/json"`) ``` from flask import Flask, Response, dat = ... # your JSON serialized data resp = Response(response=dat, ...
Is there any benefit to pyc files in a WSGI app where deployments happen several times per week?
13,081,659
2
2012-10-26T06:09:31Z
13,081,746
7
2012-10-26T06:16:29Z
[ "python", "django", "wsgi", "pyc" ]
Seems like with ever increasing frequency, I am bit by pyc files running outdated code. This has led to deployment scripts scrubbing \*.pyc each time, otherwise deployments don't seem to take effect. I am wondering, what benefit (if any) is there to pyc files in a long-running WSGI application? So far as I know, the ...
The best strategy for doing deployments is to write the deployed files into a new directory, and then use a symlink or similar to swap the codebase over in a single change. This has the side-benefit of also automatically clearing any old `.pyc` files. That way, you get the best of both worlds - clean and atomic deploy...
How can I print a float with thousands separators?
13,082,620
8
2012-10-26T07:26:58Z
13,082,684
13
2012-10-26T07:31:47Z
[ "python", "format", "decimal" ]
How can I format a decimal number so that `32757121.33` will display as `32.757.121,33`?
Use [`locale.format()`](http://docs.python.org/library/locale.html#locale.format): ``` >>> import locale >>> locale.setlocale(locale.LC_ALL, 'German') 'German_Germany.1252' >>> print(locale.format('%.2f', 32757121.33, True)) 32.757.121,33 ``` You can restrict the locale changes to the display of numeric values (when ...
Rounding down integers to nearest multiple
13,082,698
8
2012-10-26T07:32:36Z
13,082,705
25
2012-10-26T07:33:21Z
[ "python" ]
Is there a function in Python that allows me to round down to the nearest multiple of an integer? ``` round_down(19,10)=10 round_down(19,5)=15 round_down(10,10)=10 ``` I conscientiously looked at SO and found nothing related to rounding ***down*** to a nearest base. Please keep this in mind before you post links to r...
``` def round_down(num, divisor): return num - (num%divisor) In [2]: round_down(19,10) Out[2]: 10 In [3]: round_down(19,5) Out[3]: 15 In [4]: round_down(10,10) Out[4]: 10 ```
Slicing a string repeatedly
13,083,681
8
2012-10-26T08:47:33Z
13,083,741
12
2012-10-26T08:51:26Z
[ "python" ]
Repeated slicing works on tuples and lists just fine: ``` >>> tuple = ("nav", "yad") >>> tuple[0] 'nav' >>> tuple[0][0] 'n' ``` But with strings: ``` >>> name="university" >>> name[0] 'u' ``` The weird thing here is, when I try repeated slicing over string name variable, there is nothing at `name[0][0]` or `name[0]...
String is a sequence. String of one character is still a sequence with one element. So with a string you can do `name[0][0][0][0]...` and it will work fine. Same with index `-1`, that returns last element of a sequence: ``` >>> name[0][0] 'u' >>> name[0][0][-1] 'u' >>> name[0][0][-1][-1] 'u' ``` `name[0][1]` obviousl...
First items in inner list efficiently as possible
13,084,619
4
2012-10-26T09:50:22Z
13,084,647
7
2012-10-26T09:52:04Z
[ "python", "list", "optimization", "performance" ]
I have a coordinated storage list in python `A[row,col,value]` for storing non-zeros values. How can I get the list of all the row indexes? I expected this `A[0:][0]` to work as `print A[0:]` prints the whole list but `print A[0:][0]` only prints `A[0]`. The reason I ask is for efficient calculation of the number of ...
This should do it: ``` c = [x[0] for x in A] ``` It's a list comprehension that takes the first (sub-)element of every element of `A`.
df.head() sometimes doesn't work in Pandas, Python
13,085,709
13
2012-10-26T11:02:58Z
13,086,305
14
2012-10-26T11:43:09Z
[ "python", "pandas" ]
I'm a beginner in Python and the Pandas library, and I'm rather confused by some basic functionality of data frame. I've got a pandas dataframe as below: ``` >>>df.head() X Y unixtime 0 652f5e69fcb3 1 1346689910622 1 400292 1 1346614723542 2 1c9d02e4f14e 1 1346862070161 3 6...
`df.head(n)` returns a `DataFrame` holding the first n rows of df. Now to display a `DataFrame` pandas checks by default the width of the terminal, if this is too small to display the `DataFrame` a summary view will be shown. Which is what you get in the second case. Could you increase the size of your terminal, or di...
Is it a good practice to create a new `virtualenv` each time I start building a new Flask app?
13,086,960
2
2012-10-26T12:30:50Z
13,089,693
9
2012-10-26T15:17:41Z
[ "python", "flask", "virtualenv" ]
This is how I started my first `virtualenv` for my Flask app: ``` $ virtualenv flask_env $ source flask_env/bin/activate (flask_env) $ pip install Flask ``` This is my first time working with this. Is it a good practice to create a new `virtualenv` each time I start building a new Flask app?
Short answer: Yes. Longer answer: It's a bit of personal question as to how you want to work. I think you'll find that as you build more apps, each one will have different dependencies. Maybe for one app you'll want to use wtforms. Maybe for another app you'll use requests. Maybe for a third, you'll need flask-sqlalch...
python function default parameter is evaluated only once?
13,087,344
12
2012-10-26T12:56:11Z
13,087,455
10
2012-10-26T13:03:25Z
[ "python", "function", "parameters" ]
I am a python beginner, reading 'python tutorial', it says if we have a function: ``` def f(a, L=[]): L.append(a) return L print f(1) print f(2) print f(3) ``` This will print ``` [1] [1, 2] [1, 2, 3] ``` Because the default value is evaluated only once and list is a mutable object. I can understand it. ...
"The default value is only evaluated once" does not mean that a parameter with a default retains its value between invocations of the function. It means that the expression which you specify (the `None` part of `def f(a, L=None)`) is evaluated once, and the object it results in is stored in a hidden location and re-use...
Homebrew , python installing
13,088,998
27
2012-10-26T14:37:16Z
13,089,188
75
2012-10-26T14:47:51Z
[ "python", "osx", "osx-snow-leopard", "homebrew" ]
i got an error while trying to install python throught homebrew. brew says what it failed to link python , here is output: ``` Linking /usr/local/Cellar/python/2.7.3... Warning: Could not link python. Unlinking... Error: Could not symlink file: /usr/local/Cellar/python/2.7.3/bin/smtpd2.py /usr/local/bin/smtpd2.py may ...
Sounds like a permissions issue with /usr/local. ``` ### Makes you owner of /usr/local $ sudo chown -R `whoami` /usr/local ### Force uninstalls failed python $ brew uninstall -f python ### Clear the brew cache $ rm -rf `brew --cache` ### Recreate the brew cache $ mkdir `brew --cache` ### Cleanup - cleans up old h...