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def split_by_unicode_char(input_strs): """ Split utf-8 strings to unicode characters """ out = [] for s in input_strs: out.append([c for c in s]) return out
def GetBgpRoutingMode(network): """Returns the BGP routing mode of the input network.""" return network.get('routingConfig', {}).get('routingMode')
def removeWhitespaceChars(s): """ Removes whitespace characters @ In, s, string, to remove characters from @ Out, s, string, removed whitespace string """ s = s.replace(" ","") s = s.replace("\t","") s = s.replace("\n","") #if this were python3 this would work: #removeWhitespaceTrans = "".make...
def _parameters_exists_in_docstring(docstring: str) -> bool: """ Get boolean of whether Parater part exists in docstring or not. Parameters ---------- docstring : str Docstring to be checked. Returns ------- result_bool : bool If exists, True will be set. """ ...
def cutadapt_cut(s, cut_para=True): """ recognize para: cut for cutadapt eg: cut=6, cut=-3, cut=6,-3 """ if ',' in s: n = s.split(',') if len(n) > 2: raise ValueError('illegal ad_cut: %s' % s) else: c1, c2 = (int(n[0]), int(n[1])) if c1 < 0...
def vector_subtraction(p1, p2): """ Returns the difference between 2 vectors p1 and p2 are vectors in 2d space @param: tuple: (int,int), tuple: (int,int) @return: tuple(int, int) """ return ( p1[0] - p2[0], p1[1] - p2[1] )
def trapmf(x, a, b, c, d): """ Trapezoidal membership function generator. Parameters ======== x : single element array like abcd : 1d array, length 4 Four-element vector. Ensure a <= b <= c <= d. Returns ======== y : 1d array Trapezoidal membership function. """ ...
def variation_string_to_dict(variation_string, separator="="): """Helper function to convert a list of "="-separated strings into a dictionary Returns ------- dict """ var_data = variation_string.split() variation_dict = {} for var in var_data: pos_eq = var.find("=") var...
def merge_fields(*fields): """ Provided as a convenience to merge multiple groups of fields. Equivalent to: `fields.update(**other_fields)`. Dictionaries are processed in order and overwrite fields that are already present. Parameters ---------- fields : *args Field dictionaries ...
def merge(a, b): """ merge two already sorted lists """ s = [] index_a = 0; index_b = 0; while index_a < len(a) and index_b < len(b): if a[index_a] < b[index_b]: s.append(a[index_a]) index_a += 1 else: s.append(b[index_b]) index_b += 1...
def parse_gff_attributes( attr_str ): """ Parses a GFF/GTF attribute string and returns a dictionary of name-value pairs. The general format for a GFF3 attributes string is name1=value1;name2=value2 The general format for a GTF attribute string is name1 "value1" ; name2 "value2" The ...
def to_pc(val): """Convert float value in [0, 1] to percentage""" return r'%.2f\%%' % (val * 100)
def find_dupes(facts): """Find hosts with duplicate SSH host keys from PuppetDB output""" hosts_by_key = {} for fact in facts: hosts_by_key.setdefault( fact['value'], set(), ).add(fact['certname']) return { k: v for k, v in hosts_by_key.items() ...
def isblankstr(line): """ check for blank string :param line: :return bool: """ return len(line.strip()) == 0
def mean_free_path(T, P, lamb_0=67.3, T_0=296.15, P_0=101325, S=110.4): """ calculates mean free path of the aerosol particles Parameters ---------- T : float measurement temperature P : float measurement pressure lamb_0 : float reference mean free path T_0 ...
def fpack(f,*args,**kwargs): """ Pack a function and its arguments into the format: Tuple#2: f Tuple#2: arguments,keyword arguments """ return (f,args,kwargs)
def _remove_none_from_post_data_additional_rules_list(json): """ removes hidden field value from json field "additional_rules" list, which is there to ensure field exists for editing purposes :param json: this is data that is going to be posted """ data = json additional_rules = json.get...
def _merge_majorana_terms(left_term, right_term): """Merge two Majorana terms. Args: left_term (Tuple[int]): The left-hand term right_term (Tuple[int]): The right-hand term Returns: Tuple[Tuple[int], int]. The first object returned is a sorted list representing the indices ...
def first_in_dict(d): """Grabs the value returned by the first value in d.keys()""" if len(d) > 0: k = d.keys()[0] return d[k] return None
def makes10(a: int, b: int) -> bool: """Determine if the sum or if either a,b is 10.""" return (a + b == 10 or a == 10 or b == 10)
def ytb_rss(user): """Return the url for the rss format.""" return "http://gdata.youtube.com/feeds/base/users/{0}/uploads?alt=rss".format(user)
def format_obj_value(obj, default='-'): """common formatting object field""" if not obj: return default return obj
def clean_url(url, leading_slash=False): """ remove trailing slash if it exists :param url: :return: url without training slash """ new_url = url[:-1] if url.endswith("/") else url if leading_slash: new_url = new_url[1:] if new_url.startswith("/") else new_url return new_url
def filter_credit_score(credit_score, bank_list): """Filters the bank list by the mininim allowed credit score set by the bank. Args: credit_score (int): The applicant's credit score. bank_list (list of lists): The available bank loans. Returns: A list of qualifying bank loans. ...
def aggregate_customers_sessions(sessions): """ Receives as input what products customers interacted with and returns their final aggregation. Args ---- sessions: list of list of dicts. List where each element is a list of dict of type: [{'action': '', 'sku': ''}] ...
def str2bool(s): """Convert string to bool.""" return s.strip().lower() == "true"
def change_speed(body, speed=1): """Change the voice speed of the wave body.""" if speed == 1: return body length = int(len(body) * speed) rv = bytearray(length) step = 0 for v in body: i = int(step) while i < int(step + speed) and i < length: rv[i] = v ...
def parse_throttle_response(event, resp, key_name): """ Parse the get_metric_statistics() response. Adds the key specified by key_name to the event dictionary. The value is True if write throttles detected in the last minute. Args: event (dict): Event dictionary passed to lambda function...
def replace_xml(content_list): """Replaces XML entities in notes with HTML tags.""" return [c.replace("extref", "a") for c in content_list]
def get_project_variant_rules(config, variant, rule): """The rules we want to check are specified in nested dictionaries. They all follow the same structure, so this is a short helper to fetch a list of functions, corresponding to the rules evaluated for a given project and variant. :type project...
def complex_delete(a_dictionary, value): """Delete keys with a specific value in a dictionary.""" while value in a_dictionary.values(): for k, v in a_dictionary.items(): if v == value: del a_dictionary[k] break return (a_dictionary)
def short_information(title, index=0): """ Takes in track information and returns everything as a short formatted String. Args: title (str): track title string index (str): optional track number string Returns: A short formatted string of all track information. """ if ...
def filter_data(data_, flag): """ Set flag = False for oxygen generator & flag = True for CO2 scrubber """ data = data_.copy() ind = 0 while len(data) > 1: count_zero = 0 for s in data: count_zero += s[ind] == '0' ch = '0' if count_zero > len(data) - count_zer...
def download_speed(kbytes_per_second): """Returns HTML markup for KB/s.""" if not kbytes_per_second: # includes None and 0 intentionally. return 'N/A' if kbytes_per_second < 1024: return '%s KB/s' % kbytes_per_second else: return '%.2f MB/s' % (float(kbytes_per_second) / 1024)
def to_bits(_bytes: bytes) -> list: """Convert bytes to a bit list""" bits = [] offset = 0 for byte in _bytes: for i in range(8): bits.insert(0+offset,(byte >> i) & 1) offset += 8 return bits
def human_size(bytes, units=[' bytes','KB','MB','GB','TB', 'PB', 'EB']): """ Returns a human readable string reprentation of bytes""" return str(bytes) + units[0] if bytes < 1024 else human_size(bytes>>10, units[1:])
def to_camel_case(snake_case_str: str) -> str: """ Convert snake_case_str to camelCaseStr """ parts = snake_case_str.split('_') return parts[0] + ''.join(w.capitalize() or '_' for w in parts[1:])
def fill_template(params, structure, template): """ Fill template using structured params. :param params: :param structure: :param template: :return: """ try: structured_params = structure(*params) except TypeError: # params may be a single value structured_params = ...
def date_formats(request): """ date_formats """ return { 'date_format_long': 'l j F Y', }
def label_map(x): # pylint: disable=function-redefined """Mapping the original labels.""" if x == 1: return 1 else: return -1
def try_string_to_number(string_in): """This function attempts to convert a string to either an integer or a float. If both conversions fail, the string is simply returned unmodified.""" try: myout = int(string_in) except: try: myout = float(string_in) except: ...
def split_role(role): """ Return a tuple of cluster, type, and id If no cluster is included in the role, the default cluster, 'ceph', is used """ cluster = 'ceph' if role.count('.') > 1: cluster, role = role.split('.', 1) type_, id_ = role.split('.', 1) return cluster, type_, id_
def is_valid(username: str) -> bool: """ Return True if specified username is valid, False otherwise. >>> is_valid("BarackObama") True >>> is_valid("b.23") False >>> is_valid("Helloworld ") False """ for char in username: if (97 <= ord(char) <= 122) or (65 <= ord(char) ...
def unify_linebreaks(text): """Helper to return a string with all line breaks converted to LF. Args: text: a string. Returns: A string with all line breaks converted to LF. """ return text.replace('\r\n', '\n').replace('\r', '\n')
def replace_nth_column_of_matrix(column_vector, M, column_num): """ Replace a column in an existing matrix :param column_vector: The new column vector :param M: The matrix needing column update :param column_num: The location of the column in M :return: The matrix with the colum...
def get_indicator_type_value_pair(field): """ Extracts the type/value pair from a generic field. This is generally used on fields that can become indicators such as objects or email fields. The type/value pairs are used in indicator relationships since indicators are uniquely identified via their ty...
def split_url_path(path): """ Separates URL path to repository name and path. # Parameters path (str): The path from URL. # Return tuple (str, str): The repository name and the path to be listed. """ separator = "/" parts = path.split(separator) return separator.join(parts[0:2...
def GetAlleleString(allele): """Get string representation of allele If it is a sequence, return upper case sequence If _SV type, return string representation Parameters ---------- allele : ALT allele from vcf.Record Returns ------- str_allele : str String representa...
def text_var(name, value, desc=None): """Create a variable NAME with a given VALUE. Primarily for output to LaTeX. Returns a string.""" return "".join(['Note: ', str(name), ' is ', str(value)] + ([' (', desc, ')'] if desc else []))
def fp(obj): """render_formula parameters""" return { "const_separator": ".", "repeat_type_name_for_enums": True, "enum_separator": ".", "inhibit_fqn_for_parent": obj, }
def sec2year(seconds): """ Convert seconds into decimal Julian years. Julian years have 365.25 days. Parameters: * seconds : float Time in seconds Returns: * years : float Time in years Example:: >>> print sec2year(31557600) 1.0 """ return ...
def get_var(data, var_name, not_found=None): """Gets variable value from data dictionary.""" try: for key in str(var_name).split('.'): try: data = data[key] except TypeError: data = data[int(key)] except (KeyError, TypeError, ValueError): ...
def _get_type_to_speed(cfs): """Given a list of charging functions, returns an object whose keys are the CS types and values are speed rank. Speed rank is a CS type's (0-indexed) position in the ordered list of fastest CS types. """ # compute max charge rates by type result = [{ 'cs_ty...
def parabolic_backtrack(f0, g0, x1, f1, b1=0.1, b2=0.5): """ Safeguarded parabolic backtracking function Equation provided in Nocedal & Wright, 2006 ?? :type f0: float :param f0: initial misfit function value :type g0: float :param g0: slope :type x1: float :param x1: step length va...
def is_int(val): """Checks if type can be cast to numeric value""" try: if float(val).is_integer(): return True else: return False except ValueError: return False
def nestifyMatrix(listeddata, rowcount, colcount): """ Performs the inverse function of listifymatrix() method. """ clist = listeddata nested = [] for _i in range(rowcount): nested.append(clist[0:colcount]) del clist[0:colcount] return nested
def match_list_class(a_list, a_base): """ Every element of `a_list' that start with the same character of `a_base'. """ result = [] for element in a_list: if a_base.upper() == element[:len(a_base)].upper(): result.append(element) return result
def validate_bibleplay_address_format(address): """ ensures that the address given looks like a valid biblepay address """ # the addresses are always 34 chars long if len(address) != 34: return False # real addresses start with a B, testnet with an y if not address[0] in ['B'...
def product(numbers): """Return the product of the numbers, e.g. product([2, 3, 10]) == 60""" result = 1 for x in numbers: result *= x return result
def check_tag_exist(tags: list, tag_key: str, tag_value: str = '') -> bool: """ Checks whether a specified tag is in the list of given tags. """ for tag in tags: if tag_value: if tag.get('Key') == tag_key and tag.get('Value') == tag_value: return True else: ...
def is_kind_of_class(obj, a_class): """returns True if the object is an instance of, or if the object is an instance of a class that inherited from, the specified class ; otherwise False. Arguments: obj (obj) -- obj. a_class (class) -- class. Returns: boolean -- True / ...
def sigmoid_derivative(x): """Derivative to the Sigmoid function""" return x * (1 - x)
def nside_for_nbsrc(nbsrc): """ Chooses the best suited NSIDE value according to the number of sources """ if nbsrc>1e8: return 256 elif nbsrc>1e7: return 128 elif nbsrc>1e6: return 64 else: return 32
def divide(data, params=None): """ Divide function aggregation. Example config: .. code-block:: python config = { ... 'fields': ['timestamp', 'energy'], 'aggregations': [ { 'func': 'divide', 'field': '...
def generate_server_args_str(server_args): """ Create a server args string to pass to the DBMS """ server_args_arr = [] for attribute, value in server_args.items(): value = str(value).lower() if isinstance(value, bool) else value value = f'={value}' if value != None else '' arg = f'-...
def circular_distance(a: int, b: int, C: int) -> int: """ Finds the shortest distance between two points along the perimeter of a circle. arguments: a: a point on a circle's circumference. b: another point on the cicrle. C: the total circumference of the circle. return: ...
def getCleanNamespace(namespace): """Clean the namespace that is inferred from a directory structure. Args: namesapce: the namespace Returns: Clean namespace """ nslevels = namespace.split(".") finalLevel = len(nslevels) for i in range(len(nslevels) - 1, -1, -1): ...
def perimeterRect(length: float, breadth: float) -> float: """Finds perimeter of rectangle""" perimeter: float = 2 * (length + breadth) return perimeter
def get_genome_build(variant_case_obj): """Find genom build in `variant_case_obj`. If not found use build #37""" build = variant_case_obj.get("genome_build") if build in ["37", "38"]: return build return "37"
def value_ordered_keys(dic): """ Return the keys of a dictionary order by its values. Useful to get the inverse mapping of an id to offset dictionary. """ return [k for k, _ in sorted(dic.items(), key=lambda p: p[1])]
def tags_from(element): """Receive element from dataset and return separated tags""" tags = list(map(lambda token: token[1], element["tags"])) return tags
def check_dup_contig_overlap(blast_start, blast_end, contig_len, threshold): """ Checks if the blast hit covers a certain amount of the contig length """ overlap = 0 blast_len = blast_end - blast_start if(contig_len != 0): overlap = float(blast_len) / float(contig_len) * 100 # I...
def _to_io_meta(shape_meta, valid_keys, key_mappings): """ Make metadata compatible with a specific IO by filtering and mapping to its valid keys. Parameters ---------- shape_meta : dict A meta attribute of a `regions.Region` object. valid_keys : list The valid keys of a pa...
def build_tweet_url(screen_name, tweet_id): """Builds the url to a tweet""" return f'https://twitter.com/{screen_name}/status/{tweet_id}'
def get_model_constructor(config): """Return default model constructor.""" default_type = 'DefaultModelConstructor' default_args = {} default_args['model_type'] = config['type'] if 'args' in config: default_args['args'] = config['args'] return {'type': default_type, 'args': default_args}
def param_name(p): """Extract parameter name from attributes. Examples -------- - ``fix_x`` -> ``x`` - ``error_x`` -> ``x`` - ``limit_x`` -> ``x`` """ prefix = ["limit_", "error_", "fix_"] for prf in prefix: if p.startswith(prf): i = len(prf) return ...
def mod_list_as_str(str_list, add=None, remove=None, prefix='', suffix='', ignore=[]): """Function to take a delimited strings, and add or remove anything in the list add or the list remove... Can also add prefixes or suffixes to items in str list. Ignore is a list of items in the list not to add a pre...
def list2cmdline(seq): """ Modified version of the original from subprocess.py """ result = [] needquote = False for arg in seq: bs_buf = [] # Add a space to separate this argument from the others if result: result.append(' ') needquote = (" " in arg) or ("\t" in arg) or (";" in arg) or not arg if ...
def set_ranks(taxonomy): """Set ranks for species/subspecies creation.""" default_ranks = [ "genus", "family", "order", "class", "subphylum", "phylum", ] taxon_rank = None if "subspecies" in taxonomy: ranks = ["species"] + default_ranks ...
def run_pipeline_on(pipeline, item, **kwargs): """ Helper function for running the pipeline on the item, returns the processed item. :param pipeline: pipeline or Pr :param item: item to be processed :param kwargs: the keyword arguments to pass on to the Prs :return: processed item """ if...
def example(data): """ example function returns string Returns: str: simple string """ return f'{data} world!'
def force_bytes(value): """ Forces a Unicode string to become a bytestring. """ if isinstance(value, str): value = value.encode("utf-8", "backslashreplace") return value
def get_data_flows(blocks): """ Given a block dictonary from bifrost.proclog.load_by_pid(), return a list of chains that give the data flow. """ # Find out what rings we have to work with and which blocks are sources # or sinks rings = [] sources, sourceRings = [], [] sinks, sinkRi...
def x_distance(coordinate_tuple): """Intake a coordinate tuple, return the net x vector value""" x1 = coordinate_tuple[0] x2 = coordinate_tuple[2] return x2-x1
def maximum69Number(num): """ :type num: int :rtype: int """ res = "" res_l = [] str_num = str(num) for i in range(len(str_num)): if str_num[i] == "9": res = str_num[:i] + "6" + str_num[i + 1:] elif str_num[i] == "6": res = str_num[:i] + "9" + str_...
def good_power(x,n): """Compute the value x**n for integer n.""" if n==0: return 1 else: partial = good_power(x, n // 2) result = partial *partial if n%2 == 1: result *= x return result
def josephus(n, k): """ josephus(n, k) = (josephus(n-1, k) + k) % n josephus(1, k) = 0 After the first person (kth from beginning) is killed, n-1 persons are left So we call josephus(n-1, k) to get the position with n-1 persons. But the position returned by josephus(n-1, k) will consider the po...
def get_short_module_name(module_name, obj_name): """ Get the shortest possible module name """ parts = module_name.split('.') short_name = module_name for i in range(len(parts) - 1, 0, -1): short_name = '.'.join(parts[:i]) try: exec('from %s import %s' % (short_name, obj_nam...
def _infer_casing(string): """Guesses the case of a string.""" # Acceptable cases cases = ['lower', 'title', 'capitalize', 'upper'] found_cases = [case for case in cases if getattr(str, case)(string) == string] return found_cases
def merge_dict2(d1: dict, d2: dict) -> dict: """ Merges exactly 2 dicts (For use when the syntax can't be remembered to do it inline as {**d1, **d2} NB: If the same key exists in both then d2 takes precedence :param d1: Dict 1 :param d2: Dict 2 :return: {**d1, **d2} """ return {**d1,...
def _profile_hook(name, func, *args): """ Call `func(*args)` and return its result. This function is replaced by :func:`_real_profile_hook` when :func:`enable_profiling` is called. This interface is obsolete and will be replaced by a signals-based integration later on. """ return func(*args)
def oxy_ml_to_umolkg(oxy_mL_L, sigma0): """Convert dissolved oxygen from units of mL/L to micromol/kg. Parameters ---------- oxy_mL_L : array-like Dissolved oxygen in units of [mL/L] sigma0 : array-like Potential density anomaly (i.e. sigma - 1000) referenced to 0 dbar [kg/m^3] ...
def eachAsArgs(listOfArgs, f): """eachAsArgs(f, listOfArgs) Answers [f(*args) for args in listOfArgs]""" return [f(*args) for args in listOfArgs]
def reverse(graph): """replace all arcs (u, v) by arcs (v, u) in a graph""" rev_graph = [[] for node in graph] for node, _ in enumerate(graph): for neighbor in graph[node]: rev_graph[neighbor].append(node) return rev_graph
def get_param(tess_profile:dict): """ Read the parameters for the api func call :param tess_profile: :return: """ # Set Parameters parameters = {} if 'parameters' in tess_profile: for param in tess_profile['parameters']: if param != "": if "tessdata-di...
def get_name(metadata): """Return the name of an object based on the dictionary metadata. By preference: long_name, short_name, 'Unnamed' """ name = metadata.get("long_name", None) if name is not None: return name name = metadata.get("short_name", None) if name is not None: retu...
def mapv(f, *colls): """Returns a list consisting of the result of applying f to the set of first items of each coll, followed by applying f to the set of second items in each coll, until any one of the colls is exhausted. Any remaining items in other colls are ignored. Function f should accept number-of-colls arg...
def fallbackSeries(requestContext, seriesList, fallback): """ Takes a wildcard seriesList, and a second fallback metric. If the wildcard does not match any series, draws the fallback metric. Example: .. code-block:: none &target=fallbackSeries(server*.requests_per_second, constantLine(0)) ...
def merge_mappings(m1, m2, path): """Recursively merge the contents of m2 into m1""" if type(m1) is not type(m2): raise ValueError("Cannot merge %s and %s" % (type(m1), type(m2))) if type(m1) is str: if m1 == m2: return m1 # Attempting to merge "foo" into "foo" just produces "foo" # Actually.... the Valve-provid...
def get_byte(byte_str): """ Get a byte from byte string :param byte_str: byte string :return: byte string, byte """ byte = byte_str[0] byte_str = byte_str[1:] return byte_str, byte