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def expand_prefix(prefix): """Expand prefix string by adding a trailing period if needed. expandPrefix(p) should be used instead of p+'.' in most contexts. """ if prefix and not prefix.endswith('.'): return prefix + '.' return prefix
def get_optimal_value(capacity, weights, values): """knapsack problem: get the optimal fractional configuration of values/weights that fills the capacity. """ assert len(weights) == len(values) value = 0. weights_values = list(zip(weights, values)) weights_values.sort(key=lambda x: x[1]...
def _adjust_kinds(value): """Ensure kind is lowercase with a default of "metric". Rewrite deprecated field definitions for DivideMetirc, WtdAvgMetric, IdValueDimension, LookupDimension. """ if isinstance(value, dict): kind = value.get("kind", "metric").lower() # measure is a synonym...
def convex_hull_graham_scan(points): """ Adapted from Tom Switzer """ from functools import reduce TURN_LEFT, TURN_RIGHT, TURN_NONE = 1, -1, 0 def cmp(a, b): return (a > b) - (a < b) def turn(p, q, r): vectorial_product = (q[0] - p[0]) * (r[1] - p[1]) - (r[0] - p[0]) * ( ...
def mul_of_3_or_5(limit: int) -> int: """Computes the sum of all the multiples of 3 or 5 below the given limit, using filter and range. :param limit: Limit of the values to sum (exclusive). :return: Sum of all the multiples of 3 or 5 below the given limit. """ return sum(filter( lambda ...
def linked_embeddings_name(channel_id): """Returns the name of the linked embedding matrix for some channel ID.""" return 'linked_embedding_matrix_%d' % channel_id
def list_pad(l, pad_tok, max_length): """ Args: sequences: a generator of list or tuple pad_tok: the char to pad with max_seq_len: max len for padding Returns: a list of list where each sublist has same length """ result = [l[x] if x < len(l) else pad_tok for x in ran...
def get_Deborah_number(flow_rate, beam_size, q_vector, diffusion_coefficient): """May 10, 2019, Y.G.@CHX get Deborah_number, the ratio of transit time to diffusion time, (V/beam_size)/ ( D*q^2) flow_rate: ul/s beam_size: ul q_vector: A-1 diffusion_coefficient: A^2/s return Deborah_numb...
def _remove_none(**kwargs): """Drop optional (None) arguments.""" return {k: v for k, v in kwargs.items() if v is not None}
def isItPublic(stringIp): """ Is this IP address public? Parameters: string IP address of format "0.0.0.0" - "255.255.255.255" If IPv4, public, and not reserved return True, else return False. """ # Private IPs if stringIp[0:3] == "10.": return False for i in range(16, 32): ...
def annotations_to_ytbb_labels(annotations, label_list, reverse_ytbb_map): """Convert annotations from labeling UI to match YTBB index labels. Args: annotations (List[Dict]): Contains list of annotation objects with keys 'key', 'notes', 'labels'. label_list (List[str]): List of label...
def _space_all_but_first(s: str, n_spaces: int) -> str: """Pad all lines except the first with n_spaces spaces""" lines = s.splitlines() for i in range(1, len(lines)): lines[i] = ' ' * n_spaces + lines[i] return '\n'.join(lines)
def _format_ligand_dict(json_dict): """ Format ligand dictionary. Parameters ---------- json_dict : dict Dictionary with JSON file information. Returns ------- dict Formatted dictionary as needed to initialize a Ligand object using **kwargs. """ ligand_dict = {...
def decompose_fields(fields: list): """ Auxiliary func to check if 'fields' has a relationship expressed as <rel_name.rel_property> :return Tuple (A, B) where A is the list of fields divided into possible relations and its subproperties, and B is a boolean expressing if there is at least one rel...
def millions(x, pos): """The two args are the value and tick position""" if x: return '%1.0f\\,M' % (x * 1e-6) else: return '0'
def get_next_locations(cur_x, cur_y): """Get next locations from (cur_x, cur_y) location.""" changes = ( (-1, 0), (1, 0), (0, 1), (0, -1), ) return [(cur_x + change_x, cur_y + change_y) for change_x, change_y in changes]
def resolve_boolean_attribute_val(val): """ To avoid boolean values to be handled as strings, this function returns the boolean value of a string. If the provided parameter is not resolvable it will be returned as it was. Args: val: Returns: val """ try: val = bool(in...
def hsv_to_rgb(h, s, v): """ Taken from stackoverflow 24852345 """ if s == 0.0: return (v, v, v) i = int(h*6.) f = (h*6.)-i; p,q,t = v*(1.-s), v*(1.-s*f), v*(1.-s*(1.-f)); i%=6 if i == 0: return (v, t, p) if i == 1: return (q, v, p) if i == 2: return (p, v, t) if i == 3: return (...
def appendPasswordAsRootCommand(Command: str, Password: str) -> str: """Pipe 'process as SUDO' Command to the given Command.\n Password might is a correct Sudopassword.\n Return type: String. """ suffix = f"echo {Password} | sudo -S " __Command = f'{suffix}{Command}' return __Command
def is_number(num): """Checks if num is a number""" try: int(num) except ValueError: return False return True
def _get_first_if_all_equal(lst): """ Get the first element of a list if all the elements of the list are equivalent. :param lst: The list of elements. :type lst: list """ first = lst[0] for el in lst[1:]: if el != first: return None return first
def days_per_month(leap=False): """Return array with number of days per month.""" ndays = [31, 28, 31, 30, 31, 30, 31, 31, 30, 31, 30, 31] if leap: ndays[1]+= 1 return ndays
def find_index(text, pattern): """Return the starting index of the first occurrence of pattern in text, or None if not found. O(n*m) where n is the length of the pattern and m is the length of the text""" assert isinstance(text, str), 'text is not a string: {}'.format(text) assert isinstance(pattern...
def is_float(s): """ :param s: s is a string :return: True if string s can be cast to a float """ try: x = float(s) return True except: return False
def spechum2mixr(q): """ Calculate mixing ratio from specific humidity. **Inputs/Outputs** Variable I/O Description Units -------- --- ----------- ----- q I Specific humidity kg/kg r O Mixing ratio kg/kg """ return q/(1-q)
def index_to_alg(cnt): """ Convert a bit index to algebraic notation """ column = "abcdefgh" [int(cnt % 8)] rank = "12345678" [int(cnt // 8)] return column + rank
def round_mean(avg_bias, sentences, k=4): """Compute the average and round to k places""" avg_bias = round(float(avg_bias) / float(len(sentences)), k) return avg_bias
def findUniformStruct(sourceText): """ Return uniform structures dict from glsl source code. Args: sourceText (str): glsl source code Returns: dict: uniform structures """ # Find uniform structure structures = {} index = sourceText.find('struct') start =...
def next(some_list, current_index): """ Returns the next element of the list using the current index if it exists. Otherwise returns an empty string. https://docs.djangoproject.com/en/3.0/howto/custom-template-tags/#writing-custom-template-filters """ try: return some_list[int(current_i...
def fzmatch(haystack, needle, casesensitive=None): """Very simple fuzzy match, checks to see if all the characters in needed are in the haystack in left-to-right order. The function will attempt to match a space character, if no match is found space is ignored and moves on to matching the next characte...
def float_in_filename(num): """ Function to remove the "." of the float to avoid it in filenames. It convert the Numeric input into a str If the input is simply an int, it just converts it into str Parameters ---------- num: Numeric Returns: str the string "dot" will replace the ...
def breakWords(str): """This function will break up words for us.""" words = str.split(' ') return words
def add_header_field16(field_name, field_width): """ This method returns header field declaration :param field_name: the name of the field :type field_name: str :param field_width: the size in bit of the field :type field_width: int :returns: str -- the code in plain text :raises: None...
def Cumfreq(symbol, dictionary): """ This Function Takes as inputs a symbol and a dictionary containing all the symbols that exists in our stream and their frequencies and returns the cumulative frequency starting from the very beginning of the Dictionary until that Symbol. Arguments: symbol {[t...
def auto_example(x): """Docstring""" print('Called example function: ' + str(x)) return x
def hsv2rgb(hue, saturation, value): """Transform a HSV color to a RGB color.""" c = value * saturation x = c * (1 - abs((hue / 60) % 2 - 1)) m = value - c if 0 <= hue < 60: return c + m, x + m, m elif 60 <= hue < 120: return x + m, c + m, m elif 120 <= hue < 180: ret...
def unit_interval(x, xmin, xmax, scale_factor=1.): """ Rescale tensor values to lie on the unit interval. If values go beyond the stated xmin/xmax, they are rescaled in the same way, but will be outside the unit interval. Parameters ---------- x : Tensor Input tensor, of a...
def primary_container_name(names, default=None, strip_trailing_slash=True): """ From the list of names, finds the primary name of the container. Returns the defined default value (e.g. the container id or ``None``) in case it cannot find any. :param names: List with name and aliases of the container. ...
def YCbCrtoRGB(Y, Cb, Cr): """ convert YUV to RGB color :param Y: Y value (0;255) :param Cb: Cb value (0;255) :param Cr: Cr value (0;255) :return: RGB tuple (0;255) """ cb = Cb - 128.0 cr = Cr - 128.0 R = Y + (1.402 * cr) G = Y - (0.34414 * cb) - (0.71414 * cr) B = Y + (1.772 * ...
def get_probabilistic_loss_weight(current_step, annealing_step): """ Tiny function to get adaptive probabilistic loss weight for consistency across all methods. """ probabilistic_loss_weight = min(1.0, current_step / annealing_step) probabilistic_loss_weight = (100 ** probabilistic_loss_weight - 1.0...
def is_cjk(ch): """ """ code = ord(ch) return 0x4E00 <= code <= 0x9FFF or \ 0x3400 <= code <= 0x4DBF or \ 0x20000 <= code <= 0x2A6DF or \ 0x2A700 <= code <= 0x2B73F or \ 0x2B740 <= code <= 0x2B81F or \ 0x2B820 <= code <= 0x2CEAF or \ 0xF900 <= code <= 0xFA...
def zaid2za(zaid): """ Convert ZZAAA to (Z,A) tuple. """ # Ignores decimal and stuff after decimal. zaid = str(int(zaid)) Z = int(zaid[:-3]) A = int(zaid[-3:]) return (Z, A)
def parse_env_latex(key, value): """Parse paragraph opening to extract environment name.""" if key == 'Para': if len(value) >= 1: content = value[0]['c'] if content[:6] == 'begin+' or content[:6] == 'begin-': return 'begin', content[6:] if content[:4] ...
def translate(seq): """Translate a string containing a nucleotide sequence into a string containing the corresponding sequence of amino acids . Nucleotides are translated in triplets using the table dictionary; each amino acid 4 is encoded with a string of length 1. """ table = { 'ATA': 'I',...
def attrib(name, type, doc=None, objectpath=None, filepath=None, extra=None): """ Helper function for codecompletion tree. """ return (name, type, doc, objectpath, filepath, extra)
def respond_raw(request, template, context=None, args=None, headers=None): """Sends a raw response, that is the parameters passed to the respond function that is mentioned in corresponding stubout.Set """ return { 'request': request, 'template': template, 'context': context, 'args': arg...
def urljoin(*pieces): """Join componenet of url into a relative url Use to prevent double slash when joining subpath """ striped = [s.strip('/') for s in pieces] return '/'.join(s for s in striped if s)
def counter_table(sai_id): """ :param if_name: given sai_id to cast. :return: COUNTERS table key. """ return b'COUNTERS:oid:0x' + sai_id
def bbh_keys_from_simulation_keys(simulation_keys): """Extract BBH simulations from a list of all simulations Note that this function is maintained here for precise backwards-compatibility. More useful functions may be found in `sxs.utilities`. """ return [simulation_key for simulation_key in simu...
def getattribute(value, arg): """ Gets an attribute of an object dynamically from a string name Example: {{ variable|getattribute:"name" }} Example: {{ variable|getattribute:variable }} """ if hasattr(value, str(arg)): return getattr(value, arg) elif hasattr(value, 'has_key'): ...
def tab_to(num_tabs, line): """Append tabs to a line of text to reach a tab stop. Args: num_tabs (int): Tab stop to obtain (0 = column 0, 1 = column 8, etc.) line (str): Line of text to append to Returns: str: line with the correct number of tabs appeneded. If the line already ...
def split_input_target(chunk): """[summary] Define the function for splitting x & y Args: chunk ([type]): [description] Returns: [type]: [description] """ input_seq = chunk[:-1] output_seq = chunk[1:] return input_seq, output_seq
def str_choices(choices): """Returns {choice1, ..., choiceN} or the empty string""" if choices: return '{%s}' % ', '.join(choices) return ''
def crit_lt(val, tol): """Less than criterion.""" return val < 0 and -val < tol
def dot3(v1, v2): """ dot3 """ return v1[0] * v2[0] + v1[1] * v2[1] + v1[2] * v2[2]
def _is_unquoted(s): """Check whether this string is an unquoted identifier.""" s = s.replace('_', 'a') return s.isalnum() and not s[:1].isdigit()
def IdentityLayer(inp, inp_dim, outp_dim, vs, name="identity_layer", use_bias=True, initializer=None): """An identity function that takes the same parameters as the above layers.""" assert inp_dim == outp_dim, "Identity layer requires inp_dim == outp_dim." return inp
def get_list_labels(paths, num_classes): """ create a list with all labels from paths :param paths: path to all images :param num_classes: number of classes considered (an be either 10 or 50) :return: the list of labels """ # ex : paths[0] -> 's11/o1/C_11_01_000.png' # [o1, ..., o5] ->...
def map_to_twinmaker_data_type(attr_name, data_type): """ DATA_TYPE Type ------------------- 6 Int16 8 Int32 11 Float16 12 Float32 13 Float64 101 Digital 104 Timestamp 105 String 102 Blob """ ...
def address_string(content, labels=False): """content is a dict of the form:: {u'private': [{u'version': 4, u'addr': u'10.35.23.30', u'OS-EXT-IPS:kind':u'fixed'}, {u'version': 4, u'addr': u'198.202.120.194', ...
def palindrome(word : str) -> int: """ Given a string, calculates the amount of palindromes that exist within that string Parameters ---------- word : str String that may contain palindrome sub-strings Returns ------- int number of palindromes in string """ ...
def _spark_calc_values_chunk(points): """ Compute some basic information about the chunk points values The returned information are : * count : the number of points in chunk * max : the maximum value in chunk * min : the minimum value in chunk * sum : the sum of the values in chunk * sq...
def baseQ(n, b): """ Convert base 10 into base b. """ if n == 0: return [0] digits = [] while n: digits.append(int(n % b)) n //= b return digits[::-1]
def getData (tup): """ argument: tuple with tuple of int[0] and string[1] inside return: int for smallest int, largest int, number of unique strings """ numbers = () words = () for elem in tup: if elem[0] not in numbers and (type(elem[0])==int): numbers = numbers + (elem...
def invoke(collection, method_name, *args, **kargs): """Invokes the method named by `method_name` on each element in the `collection` returning a list of the results of each invoked method. Args: collection (list|dict): Collection to iterate over. method_name (str): Name of method to invoke...
def merge_location(lng, lat): """ merge location to amap str >>> merge_location(111.1, 22.22) == u'111.100000,22.220000' True >>> merge_location(111.11111123242, 22.22222212) == u'111.111111,22.222222' True :param lng: longitude, :param lat: latitude :return formatted location """ ...
def truncate_field(content): """ Truncate a string to Discord's requirement for embed fields, i.e. a maximum length of 1024. Args: content (str): String to truncate. Returns: str: Possibly truncated string, with ellipsis if truncated. Todo: This currently uses a naive ...
def is_uninformative(index_list, max_len): """ a boolean function to determine whether an input text is informative or not. Since the index 0 is used for padding and the index 1 is used for out-of-vocabulary tokens, when all token indices for an input text is either 0 or 1 only (equivalently small t...
def isWall(mapObj, x, y): """Returns True if the (x, y) position on the map is a wall, otherwise return False.""" if x < 0 or x >= len(mapObj) or y < 0 or y >= len(mapObj[x]): return False # x and y aren't actually on the map. elif mapObj[x][y] in ('#', 'x'): return True # wall is bloc...
def compute_iou(box1, box2): """xmin, ymin, xmax, ymax""" A1 = (box1[2] - box1[0])*(box1[3] - box1[1]) A2 = (box2[2] - box2[0])*(box2[3] - box2[1]) xmin = max(box1[0], box2[0]) ymin = max(box1[1], box2[1]) xmax = min(box1[2], box2[2]) ymax = min(box1[3], box2[3]) if ymin >= ymax or xm...
def _isn(val1, val2) -> float: """Distance computation for 'is not'""" if val1 is not val2: return 0.0 return 1.0
def datestring_to_sql_parameter(datestring): """ Converting date string into a dictionary suitable for the sql parameters :param datestring (string): string that contain a start and end date in the format %Y%m%d_to_%Y%m%d :return date_sql_param (dict): dictionary with the date parameters defined to con...
def _getcontextrange(context, config): """Return the range of the input context, including the file path. Return format: [filepath, line_start, line_end] """ file_i = context['_range']['begin']['file'] filepath = config['_files'][file_i] line_start = context['_range']['begin']['line'][0] ...
def calculate_xy_coords(image_size, screen_size): """Calculates x and y coordinates used to display image centered on screen. Args: image_size as tuple (int width in pixels, int height in pixels). screen_size as tuple (int width in pixels, int height in pixels). Returns: tuple (int x...
def remove_item(inventory, item): """ Remove an item from inventory if it exists. :param inventory: dict - inventory dictionary. :param item: str - item to remove from the inventory. :return: dict - updated inventory dictionary with item removed. """ if item in inventory: del inven...
def str_to_candidates(s): """ >>> str_to_candidates("345")[4] True """ return {i: str(i) in s for i in range(10)}
def find_prime(chart): """ :param chart: :return: """ prime = [] for col in range(len(chart[0])): count = 0 pos = 0 for row in range(len(chart)): # find essential if chart[row][col] == 1: count += 1 pos = row ...
def fixture_ref_flattened_dashes(): """Flattened version of `ref` with a `.` delimiter.""" ref_flattened_dashes = {"a": 1, "b-c": 2, "d-e-f": 3} return ref_flattened_dashes
def cnt_ovlp_occur(string, sub): """ Count overlapping occurrence of `sub` in `string`. E.g. `cnt_ovlp_occur("CCC", "CC")` would return 2. Python's `str.count(word)` function does NOT count overlapping occurrence. E.g. "CCC".count("CC") only returns 1. :param string: :param sub: :return: "...
def signed(val: float) -> float: """Value might be negative.""" if val > 0x7FFF: return val - 0xFFFF return val
def internal_filter(path, parent, children): """Skip any object with "internal" in the name.""" del path del parent children = [ (name, value) for (name, value) in children if "internal" not in name ] return children
def preprocess(data, fill_value, max_value, add_offset, scale_factor): """ scale it into [0, 1] """ for v in [fill_value, max_value, add_offset, scale_factor]: #print(v, type(v)) pass return (data-add_offset)/(max_value*scale_factor - add_offset)
def _is_mmf_header(line): """Returns whether a line is a valid MMF header.""" return line.startswith('---------- ') or line.startswith('MMMMM----- ')
def get_broadcast_shape(x_shape, y_shape, prim_name): """ Doing broadcast between tensor x and tensor y. Args: x_shape (list): The shape of tensor x. y_shape (list): The shape of tensor y. prim_name (str): Primitive name. Returns: List, the shape that broadcast between ...
def get_seed_nodes_json(json_node: dict, seed_nodes_control: dict) -> dict: """ We need to seed some json sections for extract_fields. This seeds those nodes as needed. """ seed_json_output = {} for node in seed_nodes_control: for key, value in node.items(): if value in json_node...
def bool_like(value, name, optional=False, strict=False): """ Convert to bool or raise if not bool_like. Parameters ---------- value : object Value to verify name : str Variable name for exceptions optional : bool Flag indicating whether None is allowed stric...
def without_last(string: str) -> str: """ >>> without_last('abc') 'ab' """ return string[:-1]
def isUrl(Path): """ Determine if the source is a URL or a file system path. """ if Path != None and ("http:" in Path or "https:" in Path): return True return False
def parse_command(command_str, valid_comms): """ valid_comms: Collection of valid commands """ command_str = command_str.strip() if command_str in valid_comms: return command_str else: raise ValueError
def _error_factory(message, error): """ Package the error info in the proper format for the marshalling function :param message: :param error: :return: ErrorResponseModel """ return { 'message': message, 'error': error }
def add_geocodes(row, **kw): """Fill up the country and region fields.""" row['beneficiary_country_code'] = kw['country_code'] row['beneficiary_country'] = kw['country'] row['beneficiary_nuts_code'] = kw['nuts_code'] row['beneficiary_nuts_region'] = kw['region'] return row
def static_regions_to_regions(static_regions): """Convert a list of static regions to ordinary regions""" return [sr.to_region() for sr in static_regions]
def new_value(start, end, frac): """Get value at a fraction of an interval Args: start (number): Start of interval end (number): End of interval frac (number): Fraction of interval Returns: number: Value at a fraction of an interval """ return (end - start) * frac +...
def normalize_run_info(run_info): """Normalize all dictionaries describing a run. Args: run_info (List[Dict]): The list of dictionaries to be normalized. Returns: List[Dict]: The input run_info but with each dictionary now having all the same keys. Note that there will be empty ...
def parse_links(this_sample_id, links, verbose=False): """ Parse the links field :param this_sample_id: :param links: :param verbose: more output :return: """ link_text="" for child in links: if 'type' in child.attrib and "entrez" == child.attrib['type']: link_te...
def normalise_dict(d): """ Recursively convert dict-like object (eg OrderedDict) into plain dict. And sorts list values. :param d: dict input """ out = {} for k, v in d.items(): if hasattr(v, 'items'): out[k] = normalise_dict(v) elif isinstance(v, list): ...
def uws(t: int, tstart: int, eps: float, alpha: int) -> float: """Unbounded-window scheduling function.""" # assert 0 <= tstart # assert 0.0 <= eps # assert 0 <= alpha t = max(t, tstart) multiplier = (1 / float(t - tstart + 1)) ** alpha multiplier = 0.0 if multiplier < eps else mu...
def laplacian_term(root_dist, weighted): """Correction term based on the training dataset distribution """ if weighted: category_map = {category[0]: 0.0 for category in root_dist} else: total = float(sum([category[1] for category in root_dist])) category_map = {category[0]: cat...
def parse_to_boolean(val): """ Convert value to boolean. """ return val in [True, 'True', 'true', 1, '1', 'Yes', 'yes']
def minMax(xs): """Calcule le minimum et le maximum d'un tableau de valeur xs (non-vide !)""" min, max = xs[0], xs[0] for x in xs[1:]: if x < min: min = x elif x > max: max = x return min,max