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def create_params_str(params, key_value_separator="_", param_separator="__"): """ All ``(key, value)`` pairs/parameters in ``params`` are concatenated using a single underscore to separate ``key`` and ``value`` and a double underscore is prepended to each parameter to separate the parameters, i.e., ...
def has_palindrome(i, start, length): """Checks if the string representation of i has a palindrome. i: integer start: where in the string to start length: length of the palindrome to check for """ s = str(i)[start:start+length] return s[::-1] == s
def fill_empties(abstract): """Fill empty cells in the abstraction The way the row patterns are constructed assumes that empty cells are marked by the letter `C` as well. This function fill those in. The function also removes duplicate occurrances of ``CC`` and replaces these with ``C``. P...
def curl_field_scalar(x, y, z, noise): """calculate a 3D velocity field using scalar curl noise""" eps = 1.0e-4 def deriv(a1, a2): return (a1 - a2) / (2.0 * eps) dx = deriv(noise(x + eps, y, z), noise(x - eps, y, z)) dy = deriv(noise(x, y + eps, z), noise(x, y - eps, z)) dz = deriv(no...
def redact_desc(desc, redact): """ Redacts bio for the final hint by removing any mention of author's name, lastname, and any middle names, if present. Returns a redacted string """ redacted_desc = desc split_name = redact.split() while split_name: redacted_desc = redacted_desc.r...
def simplifyTitle(title, target): """ Simplify a given sequence title. Given a title, look for the first occurrence of target anywhere in any of its words. Return a space-separated string of the words of the title up to and including the occurrence of the target. Ignore case. E.g., # S...
def split_data(par): """ Splits the key and the value (in case they were indicated from the user in the command-line, to be used in POSTs). We had: par = "key=value"; We are returned: couple = ["key", "value"]. Args: par -- parameters to be split...
def _get_edge_attrs(edge_attrs, concat_qualifiers): """ get edge attrs, returns for qualifiers always a list """ attrs = dict() if "qualifiers" not in edge_attrs: attrs["qualifiers"] = [] elif edge_attrs["qualifiers"] is None: attrs["qualifiers"] = edge_attrs["qualifiers"] if at...
def get_docker_command(container="telemetry"): """ API to return docker container command for execution Author: Chaitanya Vella (chaitanya-vella.kumar@broadcom.com) :param container: :return: """ command = "docker exec -it {} bash".format(container) return command
def noteToColour(note): """ Converts each note to it's corresponding valid BitTune note note: Input letter (A-G | R) returns: The string of the colour that represents note """ NOTES = {'A':'red','B':'orange','C':'yellow', 'D':'green','E':'blue','F':'indigo','G':'violet' } return NO...
def shorten(k): """ k an attrname like foo_bar_baz. We return fbb, fbbaz, which we'll match startswith style if exact match not unique. """ parts = k.split('_') r = ''.join([s[0] for s in parts if s]) return r, r + parts[-1][1:]
def opdag(op): """Function that returns the string representing the conjugate transpose of the operator. """ if '*' in op: _op = op.split('*') opout = opdag(_op[-1]) for i in range(len(_op)-1): opout += '*'+opdag(_op[i-2]) elif '^' in op: _op = op.split('^...
def zstrip(chars): """Return a string representing chars with all trailing null bytes removed. chars can be a string or byte string.""" if isinstance(chars, bytes): chars = str(chars.decode('ascii', 'ignore')) if '\0' in chars: return chars[:chars.index("\0")] return chars
def check_equations_for_primes(var_a, var_b, primes): """Return the number of consecutive primes that result for variable a and b for the formula: n**2 + an + b. Starting with zero. """ counter = 0 for i in range(0, 1_000): temp = (i**2) + (i * var_a) + var_b if temp not in primes: ...
def text_case_convert(text): """ By default, use lower case """ return text.lower()
def oneline(sentence): """Replace CRs and LFs with spaces.""" return sentence.replace("\n", " ").replace("\r", " ")
def __assert_sorted(collection): """Check if collection is ascending sorted, if not - raises :py:class:`ValueError` :param collection: collection :return: True if collection is ascending sorted :raise: :py:class:`ValueError` if collection is not ascending sorted """ if collection != sorted(coll...
def fn_Z_squid(omega, L_squid, R_squid): """Dynamic squid impedance as a function of angular frequency omega and dynamical inductance L_squid and resistance R_squid.""" return ((1j * omega * L_squid)**-1 + (R_squid)**-1)**-1
def get_value(parent, match_address, match_value): """terraform 12 return json value""" data = parent['resource_changes'] for x in range(len(data)): if data[x]['address'] == match_address: return data[x]['change']['after'][match_value] return None
def validate_sample_name(query_name: str, sample_list): """ Function will validate the query name with a sample list of defined names and aliases """ verified_sample_name = [key for key, value in sample_list.items() if query_name.lower() in value['aliases']] if verified_sample_name: return...
def get_html_attrs_tuple_attr(attrs, attrname): """Returns the value of an attribute from an attributes tuple. Given a list of tuples returned by an ``attrs`` argument value from :py:meth:`html.parser.HTMLParser.handle_starttag` method, and an attribute name, returns the value of that attribute. A...
def pad_hexdigest(s, n): """Pad a hex string with leading zeroes Arguments: s (str): input hex string n (int): number of expected characters in hex string Returns: (str): hex string padded with leading zeroes, such that its length is n """ return "0" * (n - len(s)) + ...
def my_squares(iters): """list comprehension on squaring function""" out=[i**2 for i in range(iters)] return out
def scoreSolution( args, solution ) : """ Quantitatively rank a single solution. Parameters: args - the returned arguments from initAnnealer solution - the solution to be measured Higher scores are better. Returns: A quantitative measure of goodness of the proposed solutio...
def cycle_check(classes): """ Checks for cycle in clazzes, which is a list of (class, superclass) Based on union find algorithm """ sc = {} for clazz, superclass in classes: class_set = sc.get(clazz, clazz) superclass_set = sc.get(superclass, superclass) if class_set !=...
def valid_input(instructions): """ Validate input to be a multi-line string containing directions [UDLR]+ :param instructions: Multiline string input :return: Boolean value whether input is valid """ from re import match m = match(r'[UDLR]+', ''.join(instructions)) return m is not None a...
def mitad_doble(num1,num2): """ Entra un numero y se revisa si el primero es el doble del segundo Num -> Str :param num1: Numero a ser operado :param num2: Numero a ser revisado :return: Mensaje si uno es el doble del otro >>> mitad_doble(7,14) 'Si es el doble de un impar' >>> mi...
def std_chr_name(chrom_str): """Standardize chromosome name so it starts with 'chr'""" if chrom_str.startswith("chr"): return chrom_str else: if chrom_str.startswith("Chr"): return "chr" + chrom_str[3:] else: return "chr" + chrom_str
def hex_color_for(rgb): """ Convert a 3-element rgb structure to a HTML color definition """ opacity_shade = 0.3 return "rgba(%d,%d,%d,%f)" % (rgb[0], rgb[1], rgb[2], opacity_shade)
def isnumber(obj): """ Tests if the argument is a number (complex, float or integer) :param obj: Object :type obj: any :rtype: boolean """ return ( (((obj is not None) and (not isinstance(obj, bool)) and (isinstance(obj, int) or isinstance(obj, float) or ...
def _to_list(a): """convert value `a` to list Args: a: value to be convert to `list` Returns (list): """ if isinstance(a, (int, float)): return [a, ] else: # expected to be list or some iterable class return a
def actions_by_behavior(actions): """ Gather a dictionary grouping the actions by behavior (not SubBehaviors). The actions in each list are still sorted by order of their execution in the script. @param actions (list) of Action objects @return (dict) where the keys are behaviors and the values are...
def probability_to_odds(prop): """Convert proportion to odds. Returns the corresponding odds Returns odds prop: -proportion that is desired to transform into odds """ return prop / (1 - prop)
def _check_var_type(var_value, var_name, row): """ Function for check variable type and return dictionary in the format { "name": String, "value": String } var_value: Input variable value var_name: Input variable name row: data return: Variable dictionary. """ # ...
def headers(token): """so far all headers are same. DRYs that up slightly.""" headers_obj = { 'Authorization': f'Bearer {token}', 'Content-Type': 'application/json' } return headers_obj
def generate_instructions(instruction_info): """Generates an instruction string from a dictionary of instruction info given. :params instruction_info: Dictionary :returns: String of instructions """ return f"""Give {instruction_info['amount_per_dose']} {'tablets' if instruction_info['form'] ==...
def rad3d2(xyz): """ Calculate radius to x,y,z inputted Assumes the origin is 0,0,0 Parameters ---------- xyz : Tuple or ndarray Returns ------- rad3d : float or ndarray """ return xyz[0]**2 + xyz[1]**2 + xyz[-1]**2
def partition(message): """ Takes in a decoded message (presumably passed through prepare()) and returns a list of all contained messages. The messages are strings Example: >>> partition("5 Hello6 World!") ['Hello', 'World!'] """ messages = [] while len(message) ...
def hamming_dist(puzzle): """Return the number of misplaced tiles.""" return len([i for i, v in enumerate(puzzle) if v != i+1 and v != len(puzzle)])
def walsh_iob_curve(t, insulin_action_duration): """Returns the fraction of a single insulin dosage remaining at the specified number of minutes after delivery; also known as Insulin On Board (IOB). This is a Walsh IOB curve, and is based on an algorithm that first appeared in GlucoDyn See: https://gi...
def waterGmKgDryToPpmvDry(q): """ Convert water vapor Grams H2o / Kg dry air to ppmv dry air. """ Mair = 28.9648 Mh2o = 18.01528 return (q*1e3*Mair)/Mh2o
def mention_channel_by_id(channel_id): """ Mentions the channel by it's identifier. Parameters ---------- channel_id : `int` The channel's identifier. Returns ------- channel_mention : `str` """ return f'<#{channel_id}>'
def sum_numbers(seq_seq): """ Returns the sum of the numbers in the given sequence of subsequences. For example, if the given argument is: [(3, 1, 4), (10, 10), [1, 2, 3, 4]] then this function returns 38 (which is 3 + 1 + 4 + 10 + 10 + 1 + 2 + 3 + 4). Preconditions: the given argum...
def success_response(data): """ When an API call is successful, the function is used as a simple envelope for the results, using the data key, as in the following: { status : "success", data : { "posts" : [ { "id" : 1, "title" : "A blog post", "body" : "Some useful content"...
def unpack(iter): """ Input: List of multiple comma seperated values as string. Returns: list of unique values from the string. """ unique = [] for i in iter: unique.extend(i.split(',')) return list(set(unique))
def remove_softclipped_reads(left, right, read_seq): """ Returns the read after removing softclipped bases. :param left: int left softclip :param right: int right softclip :param read_seq: string read sequence :return softclipped_read_sequence: string """ if rig...
def _format_list(elems): """Formats the given list to use as a BUILD rule attribute.""" elems = ["\"{}\"".format(elem) for elem in elems] if not elems: return "[]" if len(elems) == 1: return "[{}]".format(elems[0]) return "[\n {},\n ]".format(",\n ".join(elems))
def accel_within_limits(v, a, v_range): """ Accelerate the car while clipping to a velocity range Args: v (int): starting velocity a (int): acceleration v_range (tuple): min and max velocity Returns: (int): velocity, clipped to min/max v_range """ v = v + a ...
def to_node_label(label: str) -> str: """k8s-ifies certain special node labels""" if label in {"instance_type", "instance-type"}: return "node.kubernetes.io/instance-type" elif label in { "datacenter", "ecosystem", "habitat", "hostname", "region", "sup...
def get_remote_url(app_name): """Return the git remote address on Heroku.""" return "git@heroku.com:%s.git" % app_name
def perform_step(polymer: str, rules: dict) -> str: """ Performs a single step of polymerization by performing all applicable insertions; returns new polymer template string """ new = [polymer[i] + rules[polymer[i:i+2]] for i in range(len(polymer)-1)] new.append(polymer[-1]) return "".join(...
def make_wildcard(title, *exts): """Create wildcard string from a single wildcard tuple.""" return "{0} ({1})|{1}".format(title, ";".join(exts))
def GetExtension(filename): """Determine a filename's extension.""" return filename.lower().split('.')[-1]
def secondes(num_seconds: int) -> str: """Convert a number of seconds in human-readabla format.""" human_readable = [] if num_seconds >= 86400: human_readable.append(f"{num_seconds//86400} days") num_seconds %= 86400 if num_seconds >= 3600: human_readable.append(f"{num_seconds//3...
def hybrid_algorithm(avg, nearest, slope, silence=False): """hybrid algorithm based on average rating, nearest neighbour and slope one I don't use slope one because it's hard to find the similar movie, so the performance of slope one is poor. """ sign = (nearest - avg) / abs(nearest - avg) rati...
def remove_unicode(string): """ Removes unicode characters in string. Parameters ---------- string : str String from which to remove unicode characters. Returns ------- str Input string, minus unicode characters. """ return ''.join([val for val in string if 31 <...
def opp(c): """ >>> opp('x'), opp('o') ('o', 'x') """ return 'x' if c == 'o' else 'o'
def left_bisect(sorted_list, element): """Find an element in a list (from left side) """ idxLeft = 0 idxRight = len(sorted_list) - 1 while idxLeft < idxRight: # the middle is like taking the average of the left and right # since we create an integer / truncate, this is a left bisecti...
def rename(imgName, char): """ Helper function for renaming output files """ title = imgName.split(".jpg")[0] newTitle = "{}_{}.jpg".format(title, char) return newTitle
def to_coord(width, height, coord): """ returns the coordinate for a pixel in a list of pixels """ x = coord % width y = coord // width assert (y < height) return (coord % width, coord // width)
def extract_lng(geocode): """Extract longitude from geocode result. Extracts longitude from the geocode result (given by the google api). Parameters ---------- geocode: dict Dictionary of geocode results """ return geocode['geometry']['location']['lng']
def mapping_to_list(mapping): """Convert a mapping to a list""" output = [] for key, value in mapping.items(): output.extend([key, value]) return output
def alleviate_cohorte(cohorte, threshold_alleviate): """ -> alleviate patient vector in cohorte : check the discrete value of all parameter, if the count of "normal" value is above the threshold_alleviate the variable is deleted from all patient vector. -> cohorte is a list of patient vector (i.e a list...
def sort_phrases(phrases): """Orders phrases alphabetically by their original text.""" def _sort_phrase(phrase): original = phrase['original'] try: # Phrase numbers specified numerically for ordering purposes int_val = int(original) return str(int_val).zfill(4) ...
def clip_vertex(vertex, x_bounds, y_bounds): """Clips `Polygon` vertex within x_bounds and y_bounds. Args: vertex: 2-tuple, the x and y-coorinates of `Polygon` vertex. x_bounds: 2-tuple, the min and max bounds in the x-dimension of the original image. y_bounds: 2-tuple, the ...
def pplummer(r, d0=1., rp=1.): """Derive a plummer sphere on r""" return d0 / (1. + (r / rp)**2)**2
def no_filtering( dat: str, thresh_sam: int, thresh_feat: int) -> bool: """Checks whether to skip filtering or not. Parameters ---------- dat : str Dataset name thresh_sam : int Samples threshold thresh_feat : int Features threshold Returns ...
def first_one(n): """Replace each digit in a number with its distance -- in digits -- from the first 1 to come *after* it. Any number that does not have a 1 after it will be replaced by a 0, and two digits side-by-side have a distance of 1. For example, 5312 would become 2100. '5' is 2 away from 1, and ...
def unconvert_from_RGB_255(colors): """ Return a tuple where each element gets divided by 255 Takes a (list of) color tuple(s) where each element is between 0 and 255. Returns the same tuples where each tuple element is normalized to a value between 0 and 1 """ return (colors[0]/(255.0), ...
def format_ucx(name, idx): """ Formats a name and index as a collider """ # one digit of zero padding idxstr = str(idx).zfill(2) return "UCX_%s_%s" % (name, idxstr)
def is_sha1(instring): """Check if instring is sha1 hash.""" if instring.endswith("-f"): instring = instring[:-2] if len(instring) != 40: return False try: int(instring, 16) except ValueError: return False return True
def time_to_min(time): """Convert time in this format hhmm into minutes passed sind 0000 0830->510 1345->825 """ minutes = time%100 hours = time//100 return hours*60+minutes
def get_objects_names(xml_object_list): """ Method that returns a list with all object aliases/names from object's list """ object_name_list = [] # Create the xml [object_name (and object_alias)] list for xml_object in xml_object_list: object_name_list.append(xml_object.name) tr...
def describe_weather(degrees_fahrenheit): """ Describes the weather (according to Marc) Uses conditional logic to return a string description of the weather based on degrees fahrenheit. Parameters ---------- degrees_fahrenheit : int The temperature in degrees fahrenheit. Used to reaso...
def _get_parent(child_index, parent_diff, parent_indices): """Private function to find the parent of the given child peak. At child peak index, follow the slope of parent scale upwards to find parent Parameters ---------- child_index: int Index of the current child peak parent_diff: lis...
def find_gc(seq: str) -> float: """ Calculate GC content """ if not seq: return 0 gc = len(list(filter(lambda base: base in 'CG', seq.upper()))) return (gc * 100) / len(seq)
def cmps(s1, s2): """ helper to compare two strings :param s1: left string :param s2: right string :return comparison result as -1/0/1 """ if (s1 == s2): return 0 if (s1 < s2): return -1 return 1
def sum_numbers(*values: float) -> float: """ calculates the sum of all the numbers passed as arguments """ sum = 0 for value in values: sum += value return sum # return sum(values)
def index_restrict(i, arr): """ Quick Internal Function - ensure that index i is appropriately bounded for the given arr; i.e. 0 <= i < len(arr) :param i: :param arr: :return: """ if i < 0: i = 0 elif i > len(arr) - 1: i = len(arr) - 1 return i
def calculate_q_c1n(qc, CN): """ qc1n from CPT, Eq 2.4 """ q_c1n = CN * qc * 1000 / 100 return q_c1n
def is_multiple_of(a: int, b: int): """Check if a is a multiple of b""" return a % b == 0
def to_huf(amount: int) -> str: """ Amount converted to huf with decimal marks, otherwise return 0 ft e.g. 1000 -> 1.000 ft """ if amount == "-": return "-" try: decimal_marked = format(int(amount), ',d') except ValueError: return "0 ft" return f"{decimal_marked....
def unf_gas_density_kgm3(t_K, p_MPaa, gamma_gas, z): """ Equation for gas density :param t_K: temperature :param p_MPaa: pressure :param gamma_gas: specific gas density by air :param z: z-factor :return: gas density """ m = gamma_gas * 0.029 p_Pa = 10 ** 6 * p_MPaa rho_gas =...
def flatten(_list): """Flatten a 2D list to 1D""" # From http://stackoverflow.com/a/952952 return [item for sublist in _list for item in sublist]
def subreddit_idx_to_subreddit(idx): """ Warning: temporarily hardcoded for convenience. Beware! :param idx: :return: """ subreddits = {0: '100DaysofKeto', 1: 'AskMen', 2: 'AskMenOver30', 3: 'AskWomen', 4: 'AskWomenOver30',...
def _is_odd(num): """ Check if a number is even or odd. Returns True if odd and False if even. Parameters ---------- num : int Integer number to check Returns ------- condition : bool True if odd and False if even """ return bool(num & 0x1)
def trunc(x): """Implementation of `trunc`.""" return x.__trunc__()
def queenCanTattack(board, size, row, column): """Check if the new queen will not be able to attack an other one. Args: board (array): board on which the queen will be size (int): size of the board row (int): row position on the board column (int): column position on the board Retu...
def fix_saving_name(name): """Neutralizes backslashes in Arch-Vile frame names""" return name.rstrip('\0').replace('\\', '`')
def to_unicode_repr(_letter): """helpful in situations where browser/app may recognize Unicode encoding in the \u0b8e type syntax but not actual unicode glyph/code-point""" # Python 2-3 compatible return "u'" + "".join(["\\u%04x" % ord(l) for l in _letter]) + "'"
def insertionsort(x, count = False): """ For each element e of x, move through the array until you come to a value that is less than e, or the end of the array, then place e at the new location. """ assignments, conditionals = 0, 0 for i in range(1, len(x)): element = x[i] j = i...
def interval_str_to_int_values(s): """ Converts a string in the format '1-5,10-100:10,1000,1000' to a list ordered numbers: [1, 2, 3, 4, 5, 10, 20, 30, 40, 50, 60, 70, 80, 90, 100, 1000]. a-b will be converted to all numbers between a and b, including a and b and incrementing by 1. a-b:n will be co...
def tpatt(tag): """ Return pattern matching a tag found in comma separated string. (?i) : case-insensitive flag ^{tag}\\s*, : matches beginning ,\\s*{tag}\\s*, : matches middle ,\\s*{tag}$ : matches end ^{tag}[^\\w+] : matches single entry ( no commas ) """ ...
def actions(context, request): """ Renders the drop down menu for Actions button in editor bar. :result: Dictionary passed to the template for rendering. :rtype: dict """ actions = [] if hasattr(context, "type_info"): actions = [ a for a in context.type_info.action_links if ...
def fibonacci(n: int) -> int: """Return the nth fibonacci number >>> fibonacci(0) 0 >>> fibonacci(1) 1 >>> fibonacci(10) 55 >>> fibonacci(20) 6765 >>> fibonacci(-2) Traceback (most recent call last): ... ValueError: n must be >= 0 """ if n < 0: ra...
def pretty_size_kb(value): """ More human-readable value instead of zillions of digits """ if value < 1024: return str(value) + " KB" if value < 1024 * 1024: return str(value/1024) + " MB" return str(value/(1024*1024)) + " GB"
def find_low_index(arr, key): """Find the low index of the key in the array arr. Time: O(log n) Space: O(1) """ lo, hi = 0, len(arr) while lo < hi: mi = (lo + hi) // 2 if arr[mi] < key: lo = mi + 1 elif arr[mi] == key and (mi == 0 or arr[mi - 1] < key): ...
def adjust_edges(outer, inner): """ outer: foo bar bat ham spam inner: ar bat ha returns: bar bat ham """ # :( # assert inner in outer, f"WTF: {inner} NOT IN {outer}" orig_outer = outer outer = outer.lower() inner = inner.lower() left = outer.find(inner) right = left + le...
def get_latest_checkpoint(file_names): """Get latest checkpoint from list of file names. Only necessary if manually saving/loading Keras models, i.e., not using the tf.train.Checkpoint API. Args: file_names: List[str], file names located with the `parse_keras_models` method. Returns: str, t...
def remove_end_plus(s): """Remove plusses at the end.""" r = s[::-1] new_s = "" seen_minus = False for el in r: if not seen_minus: if el == "-": seen_minus = True new_s = el else: new_s += el return new_s[::-1]