content
stringlengths
42
6.51k
def determine_native_name(coreclr_args, base_lib_name, target_os): """ Determine the name of the native lib based on the OS. Args: coreclr_args (CoreclrArguments): parsed args base_lib_name (str) : root name of the lib target_os (str) : os to run tests on Return: (str) : nam...
def video_type(compress: bool = False, trim: bool = False, trim_compress: bool = False) -> str: """Return type of the video. The returned value is generated by conditional checks. Args: compress: Boolean value (default: False) if video to be compress. trim: Boolean...
def get_lock_filepath(filepath): """Get a lock file path for filepath. Args: filepath (str): Path. Returns: str: Lock file path. """ return f'{filepath}.lock'
def next_power(x: int, k: int = 2) -> int: """Calculate x's next higher power of k.""" y, power = 0, 1 while y < x: y = k ** power power += 1 return y
def getAngleStatus(angle): """ returns status based on the angle. Status codes: 0 - straight (-10 to +10) 1 - left or down (less than -10) 2 - right or up (greater than 10) """ if angle < -10: return 1 elif angle > 10: return 2 return 0
def transform(data, pse): """The transformer function.""" param = "payload" pos = data.find(param + "=") pos += len(param + "=") body = data[pos:] if body.endswith("\r\n"): body = body.rstrip("\r\n") elif body.endswith("\n"): body = body.rstrip("\n") elif body.endswith("...
def cpu_bound_summing_custom(number: int): """ Multiprocessing doesn't seem to like the library "deal". """ return sum(i * i for i in range(number + 1))
def use_middleware_script(container_type): """ Should the pilot use a script for the stage-in/out? Check the container_type (from queuedata) if 'middleware' is set to 'container' or 'bash'. :param container_type: container type (string). :return: Boolean (True if middleware should be containerised)...
def iou_set(set1, set2): """Calculate iou_set """ union = set1.union(set2) return len(set1.intersection(set2)) / len(union) if union else 0
def camel_case(st): """ Convert a string to camelCase. From: https://stackoverflow.com/questions/8347048/camelcase-every-string-any-standard-library """ output = ''.join(x for x in st.title() if x.isalnum()) return output[0].lower() + output[1:]
def pad(input, size=8): """ >>> pad('foo') 'foo=====' >>> pad('MZXW6YTBOJUWU23MNU') 'MZXW6YTBOJUWU23MNU======' """ quanta, remainder = divmod(len(input), size) padding = '=' * ((size - remainder) % size) return input + padding
def _merge_keys(dicts): """Return the union of the keys in the list of dicts.""" keys = [] for d in dicts: keys.extend(d.keys()) return frozenset(keys)
def fix_file(filename): """ ASCII STL file from 3D GNOME have a broken first line so we patch it into another file, leaving the original untouched """ new_filename = filename.replace('.stl','_fix.stl') # Kludgy with open(filename,'r') as f: first_line = f.readline() if '...
def duo_anonymous_ip_failure(rec): """ author: airbnb_csirt description: Alert on Duo auth logs marked as a failure due to an Anonymous IP. reference: https://duo.com/docs/policy#anonymous-networks playbook: N/A """ return rec['result'] == 'FAILURE' and rec['reason'] == 'Anonym...
def fibonacci(n): """Function that provides nth term of a fibonacci series.""" x, y = 0, 1 for i in range(n - 1): x, y = y, x + y return x
def all_equal(values: list): """ Check that all values in given list are equal """ return all(values[0] == v for v in values)
def removePenBob(data): """ Merge segments with same beginning and end """ outData = {} for pen in data: outSegments = [] outSegment = [] for segment in data[pen]: if not outSegment: outSegment = list(segment) elif outSegment[-1] == ...
def ScaleData(data, old_min, old_max, new_min, new_max): """Scale the input data so that the range old_min-old_max maps to new_min-new_max. """ def ScalePoint(x): if x is None: return None return scale * x + translate if old_min == old_max: scale = 1 else: scale = (new_max - new_min) ...
def get_user_video_url(user_type, key): """Compile the user videos url.""" return f'https://www.pornhub.com/{user_type}/{key}/videos'
def does_intersect_rect(p, particles, padding, rect, is_3d = False): """ Returns true if particle p is sufficiently close or outside the rectangle (in 2d) or cuboid (in 3d) Parameters ---------- p : list Coordinates of center and radius of particle [x,y,z,r] particles : list List of center + ra...
def to_string(tag): """ Creates a pretty string from any given XML tag. """ temp = tag.replace('_', ' ').title() temp = temp.replace('Fir', 'FIR') return temp
def get_numeric_columns(columns): """Identify numeric string elements in a list. Parameters ---------- columns : list List of str with column names. Returns ------- list List containing all string elements which are numeric. """ numeric_elements = [] for column...
def hyphen_last(s): """Converts '-foo' to 'foo-', so that 'foo-' comes after 'foo' which is useful for sorting.""" if s.startswith('-'): return s[1:] + '-' return s
def selected_summary(summaries: list = []): """ The gene summary selection algorithm used to select the summary that is displayed at the top of the gene report. :param summaries: An ordered list containing counts of each gene summary type. :return: The name of the summary that would be selected gi...
def decUTF8(inp): """ Recursively decode bytes as utf8 into unicode """ if isinstance(inp, bytes): return inp.decode('utf8') elif isinstance(inp, list): return [decUTF8(x) for x in inp] elif isinstance(inp, dict): return {decUTF8(key): decUTF8(val) for key, val in inp.ite...
def read_file(path: str) -> str: """ Get the content of a file """ try: return open(path, "r").read() except FileNotFoundError: return ""
def flight_time_movies_3_utilize_set(movie_lengths, flight_length): """ Solution: As we iterate through our movie lengths, store the matching movie length needed in a set for a constant time lookup on all subsequent iterations. Complexity: Time: O(n) Space: O(n) """ if len(movie_lengths) < 2: raise ValueEr...
def remove_path_segments(segments, remove): """ Removes the path segments of <remove> from the end of the path segments <segments>. Examples: # '/a/b/c' - 'b/c' == '/a/' remove_path_segments(['','a','b','c'], ['b','c']) == ['','a',''] # '/a/b/c' - '/b/c' == '/a' remove_path_segm...
def tokenize(source): """ Splits an input string into meaningful tokens (left parens, right parens, other whitespace-separated values). Returns a list of strings. Arguments: source (str): a string containing the source code of a carlae expression """ # Separate al...
def retriable_error(exception): """Return True if test should be re-run based on the Exception""" return isinstance(exception, (AssertionError,))
def _maybe_right_split(s, splitter): """If we can, split the string `s` by `splitter` and take the right-hand component (the second item in the returned tuple). """ if splitter and splitter in s: return s.split(splitter)[1] else: return s
def flatten(d, sep='_', parent_key=''): """Flattens a nested map. Adapted from https://stackoverflow.com/a/6027615/254190""" items=dict() for k, v in d.items(): new_key = parent_key + sep + k if parent_key else k if v and isinstance(v, dict): items = {**items, **flatten(v, s...
def path_shift(script_name, path_info, shift=1): """ Shift path fragments from PATH_INFO to SCRIPT_NAME and vice versa. :return: The modified paths. :param script_name: The SCRIPT_NAME path. :param script_name: The PATH_INFO path. :param shift: The number of path fragments to shift....
def pascal_row(n): """ Returns n-th row of Pascal's triangle """ result = [1] x, numerator = 1, n for denominator in range(1, n // 2 + 1): x *= numerator x /= denominator result.append(x) numerator -= 1 if n & 1 == 0: result.extend(reversed(result[:-1])) ...
def format_runtime(runtime): """Formats the given running time (in seconds).""" if runtime < 60: # Just seconds. return '{:.2f}s'.format(runtime) # Minutes and seconds. return '{}m {}s'.format(int(runtime // 60), int(runtime % 60))
def printable_glyph_list(glyph_list, quote=False): """Returns a printable form for a list of glyphs.""" if quote: suffix = "'" else: suffix = "" if len(glyph_list) == 1: return glyph_list[0] + suffix else: glyph_list = [glyph + suffix for glyph in glyph_list] ...
def filter_by_value(dct, func=lambda val: val): """ filter dictionary entries by their values """ return {key: val for key, val in dct.items() if func(val)}
def create_final_top_msg(top_songs: list) -> str: """ Function, that create top command response message. """ msg = f"TOP {len(top_songs)} songs\n" for song in top_songs: msg += f"{song['artist']} - {song['title']} ---- {len(song['voted_users'])}\n" return msg
def get_strs_in_cats(str_list, cats, compl=False): """ str_list is the general list of strings, usually the list of all cell names cats is a selection of strings, it is usually a list for any x in str_list, if x is part of any y (y is an element of cats) then x is chosen. Example of str_list: all th...
def contigs_n_bases(contigs): """Returns the sum of all n_bases of contigs.""" return sum(c.n_bases for c in contigs)
def classToExceptionCode(cls): """ return C++ enum exception code for class Args: cls: an exception class, must be inheriting from Exception Returns: integer encoding exception type """ lookup = {BaseException : 100, Exception : 101, ArithmeticError : 102, ...
def get_env_logname(name): """ get_env_logname """ modname = name.split('.')[0].upper() envname = f"{modname}_LOGLEVEL" # print(envname) return envname
def _getname(infile): """ Get file names only. Examples -------- >>> _getname("drop/path/filename.txt") 'filename.txt' >>> _getname(["drop/path/filename.txt", "other/path/filename2.txt"]) ['filename.txt', 'filename2.txt'] """ from pathlib import Path if isinstance(infile,...
def _generate_params(kwargs): """ Generate JSON based on the arguments passed to this function """ params = {} for key in kwargs: if kwargs[key] != None: params[key] = kwargs[key] return params
def compute_max_shape(shapes, max_dims=None): """Computes the maximum shape combination from the given shapes. Parameters ---------- shapes : iterable of tuple Shapes to coombine. max_dims : int, optional Pre-computed maximum dimensions of the final shape. If None, is comput...
def eliminate(problem, location, listOfLocations): """ Given a list of locations, eliminate from the problem the number that is present at the `location`. :param list problem: Two-dimensional list of sets :param tuple location: Location with the number to be removed :param list<tuple> listOfLoc...
def sqlchar_encode(encvalue): """ SQL char encode the specified value. Example Format: CHAR(72)+CHAR(101)+CHAR(108)+CHAR(108)+CHAR(111)""" charstring = "" for item in encvalue: val = "CHAR(" + str(ord(item)) + ")+" charstring += val return(charstring.rstrip("+"))
def normalize(text, *, title_case: bool = True, underscores: bool = True, **kwargs): """Attempts to normalize a string Parameters ----------- text: Any The string or object to attempt to normalize title_case: bool Returns the formatted string as a Title Case string. Any substitution...
def elipses(long_string,max_length=40,elipses='...'): """!Returns a shortened version of long_string. If long_string is longer than max_length characters, returns a string of length max_length that starts with long_string and ends with elipses. Hence, the number of characters of long_string that w...
def runnable_validator(language, options): """Options validator for runnable codemirror code blocks.""" okay = True if 'lang' not in options: okay = False return okay
def get_tool_info(whitelist, tool_name): """ Search the whitelist by tool name. :returns: A dictionary , or none if no tool matching that name was found. :rtype: dict or None """ for category, category_tools in whitelist.items(): for tool_info in category_tools: if tool_info...
def XYToInd(location, width, height): """Location (x,y) to index""" return location[1] * width + location[0]
def stringify_value(value): """Convert any value to string. """ if value is None: return u'' isoformat = getattr(value, 'isoformat', None) if isoformat is not None: value = isoformat() return type(u'')(value)
def code_to_str(code,alphabet): """ Takes a code list/tensor and gets the corresponding sentence using the alphabet. Alphabet must have has blank(0) at index zero, each symbol is an idx. """ return "".join([alphabet[symbol] for symbol in code])
def to_bool(value: str) -> bool: """ Convert a string to a boolean. Arguments: value: The string to convert. Returns: True or False. """ return value.lower() not in {"", "0", "no", "n", "false", "off"}
def sunset_float(solar_noon_float, hour_angle_sunrise): """Returns Sunset as float with Solar Noon Float, solar_noon_float and Hour Angle Deg, hour_angle_deg""" sunset_float = (solar_noon_float * 1440 + hour_angle_sunrise * 4) / 1440 return sunset_float
def get_user(user_id=None): """ Return object representing the logged in user Keyword Parameters: user_id -- String, identifier representing the logged in user (Default: None, representing an public/anonymous user session) >>> # Check public/Anonymous user >>> from pprint import pprint ...
def get_lake_abbrev(record): """A helper function used by get_latlon() Arguments: - `record`: """ lake = record.get("lake") if lake: lake = lake.strip() if len(lake) > 2: return lake[:2].upper() else: return lake.upper() else: return N...
def go_up_right(x: int, y: int) -> tuple: """ Go 1 unit in both positive x and y directions :param x: x-coordinate of the node :param y: y-coordinate of the node :return: new coordinates of the node after moving diagonally up-right """ return x + 1, y + 1
def make_pairs(I, mid): """ We take pairs as [ [9, 1], [8, 2], [7, 3], [6, 4]] :param I: :param mid: :return: """ h = 0 t = len(I) - 1 pairs = [] while h < mid-1: pairs.append([I[h], I[t]]) h += 1 t -= 1 return pairs
def sample_bounded_Pareto(alpha = 1., L = 1., H = 100., size=None, seed=None): """ Use: sample_bounded_Pareto(alpha = 1., L = 1., H = 100., size=None, seed=None) random samples drawn from the bounded Pareto distribution, p_X(x) ~ x^(-alpha-1), L<x<H 0, else S...
def create_zero_matrix(rows: int, columns: int) -> list: """ Creates a matrix rows * columns where each element is zero :param rows: a number of rows :param columns: a number of columns :return: a matrix with 0s e.g. rows = 2, columns = 2 --> [[0, 0], [0, 0]] """ matrix = [] if n...
def calories(snacks): """ >>> calories(0) 0 >>> calories(1) 5 >>> calories(2) 55 >>> calories(3) 60 >>> calories(4) 110 """ unhealthy = 50 healthy = 5 if snacks % 2 == 0 and snacks != 0: return calories(snacks - 1) + unhealthy elif (snacks % 2 ...
def complete_english(string): """ >>> complete_english('dont do this') "don't do this" >>> complete_english('doesnt is matched as well') "doesn't is matched as well" """ for x, y in [("dont", "don't"), ("doesnt", "doesn't"), ("wont", "won't"), ...
def is_float_like(val): """Check if a value looks like a float.""" try: return str(float(val)) == str(val) except Exception: return False
def equation(operation, firstnum, secondnum): """ Solve a simple maths equation manually """ if operation == 'plus': return firstnum + secondnum elif operation == 'minus': return firstnum - secondnum elif operation == 'multiply': return firstnum * secondnum elif opera...
def get_bold_token(token): """Apply bold formatting to a given token. https://api.slack.com/docs/message-formatting#message_formatting Args: token (str): String sequence with a specific definition (for parser). Returns: str: bold formatted version of a token. """ return "*{}*"...
def cdf_points(marginal_hist): """ Generate the points for a CDF of a distribution from its marginal histogram. """ cumulative = 0 total = sum(x[1] for x in marginal_hist) points = [] for (val, count) in marginal_hist: cumulative += count points.append((val, cumulative / ...
def get_max_len(in_string, max_len): """Gets current length of string and returns it if it exceeds the provided max_len. Otherwise, returns the provided max_len. """ curr_len = len(in_string) if curr_len > max_len: return curr_len return max_len
def chunkIt(seq, num): """ Divide a sequence seq into num roughly equal pieces. :param seq: :param num: :return: """ avg = len(seq) / float(num) out = [] last = 0.0 while last < len(seq): out.append(seq[int(last):int(last + avg)]) last += avg return out
def uncap_sentence(sent): """ Workaround for tweets: sometimes the entire sentence is in upper case. If more than 99% of the sentence is in upper case, this function will convert it to lower case. :param sent: the tweet :return: the sentence, lower cased if it is all in upper case """ ...
def ext(name): """Extracts the filename extension.""" dot = name.rfind(".") if -1 != dot: return name[dot:] return ""
def hash_function_2(key: str) -> int: """ Sample Hash function #2 to be used with A5 HashMap implementation DO NOT CHANGE THIS FUNCTION IN ANY WAY """ hash, index = 0, 0 index = 0 for letter in key: hash += (index + 1) * ord(letter) index += 1 return hash
def street_not_in_use(street, items): """ Check if elements of street are not in use already. For example [[(2, 'black'), (3, 'black'), (4, 'black'),(5, 'black)],[(3, 'black'), (4, 'black'), (5, 'black')]] would return false, because 3, 4 and 5 are already used :param street: List of elements that w...
def prime_factors(n): """Returns all the prime factors of a positive integer""" factors = [] d = 2 while n > 1: while n % d == 0: factors.append(d) n /= d d = d + 1 if d*d > n: if n > 1: factors.append(n) break retur...
def escape_for_tsv(text: str) -> str: """Changes double-quotes to single-quotes, and adds double-quotes around the text if it has newlines/tabs.""" text.replace("\"", "'") if "\n" in text or "\t" in text: return "\"{}\"".format(text) return text
def pixel_pos_to_game_grid(x_pixel, y_pixel): """ input: position in pixels, touple return: position in gridtouple """ grid_nx = x_pixel // 100 # integere division grid_ny = y_pixel // 100 return(grid_nx, grid_ny)
def unnormalize_parameters(normed_parameters, minvals, maxvals): """takes in a list of parameters and undoes simple min/max normalization according to min/max values INPUTS normed_parameters: length n, containing parameters for a star minvals: length n, minimum parameter values maxvals: length n, ma...
def checkio(array): """ sums even-indexes elements and multiply at the last """ res = 0 if len(array)>0: sum = 0 for i in range(0,len(array)): if i % 2 == 1: continue print ('Selecting ', i , '->', array[i]) sum += array[i] ...
def get_pp_line(cv, vals): """ Return a point that gives a particular CV, when the collective variables are defined through a line. Parameters ---------- cv : array The target cv. vals : list A list of the line defining the CV. Returns ------- pp : array Th...
def c2scToSmcpName( c2scname ): """Turns 'Aacute.c2sc' into 'aacute.smcp'.""" glyphname = c2scname[:c2scname.find(".")].lower() suffix = c2scname[c2scname.find("."):].replace("c2sc", "smcp") return glyphname + suffix
def format_tweet_url(tweet: dict) -> str: """ Construct tweet link url :param tweet: :return: """ tweet_url = "https://twitter.com/{}/status/{}".format(tweet['user']['screen_name'], tweet['id_str']) return tweet_url
def make_tuple_fromstr(s, value_type): """ Create a tuple from a string. :param str s: string to convert to a tuple :param value_type: type of values to be contained within tuple :return: tuple from string :rtype: tuple """ # remove tuple braces and strip commands and space from all val...
def convert_row_to_dict(row): """ Convert a list of fields in the CloudFlare CSV file into a dict with field names. """ cf_dict = dict() cf_dict['hostname'] = row[0] cf_dict['clientIp'] = row[1] # CloudFlare Placeholder, always a hyphen cf_dict['col3'] = row[2] # CloudFlare Plac...
def ByteToHex( byteStr ): """ Convert a byte string to it's hex string representation e.g. for output. """ return ''.join( [ "%02X " % ord( x ) for x in byteStr ] ).strip()
def get_min_dr(frequency): """ Returns the MIN data rate for the provided frequency.""" # if frequency in VALID_FREQ: # return 0 # else: # return 0 return 0
def lwavg(a1, a2, w1, w2): """ A linear weighted average for comparison """ return (w1*a1 + w2*a2), 0
def nemoFibonacci(n, nemo): """Recursive Fibonacci function with nemoization. """ if n <= 0: return 0 elif n ==1: return 1 elif nemo[n] == 0: nemo[n] = nemoFibonacci(n-2, nemo) + nemoFibonacci(n-1, nemo) return nemo[n]
def _api_cmd(cmd): """Prefix the container command with the docker cmd""" return f"docker exec -it mpasocial_api {cmd}"
def GetGapSequenceConsensus_old(origTopoMSASeqList, indexIDTTopo):#{{{ """Get a sequence of gap fractions of the consensus topology """ gapSeqCons =[]; apd=gapSeqCons.append lengthAlignment = len(origTopoMSASeqList[0]); numIDTTopo = len(indexIDTTopo) for i in range(0, lengthAlignment): ...
def convert_truelike_to_bool(input_item, convert_int=False, convert_float=False, convert_nontrue=False): """Converts true-like values ("true", 1, True", "WAHR", etc) to python boolean True. Taken from korbinian python package by Mark Teese. This is allowed under the permissive MIT license. Parameters ...
def idx_to_zbin_nob(idx): """ Alternative to idx_to_zbin for when shear B modes are not included. Return the z bin corresponding to a particular row or column index, assuming 2 fields per z bin. Args: idx (int): Field index. Returns: int: z-bin corresponding to field index, where 1...
def convert(names, midterm1, midterm2, final): """ Takes dictinaries and convert them to a list Args: names: dictionary keys are numbers values are names midterm1: dictionary keys are numbers values are midterm1 scores midterm2: dictionary keys are numbers values are midterm2 scores...
def idtp(df, id_global_assignment, num_objects, idfn): """ID measures: Number of true positives matches after global min-cost matching.""" del df, id_global_assignment # unused return num_objects - idfn
def zipformat(ll, header_list): """ zips together FORMAT labels, Sample name and format values into one dict """ for nr, plist in enumerate(ll[9:]): formatlist = [ header_list[nr + 9] + "_" + i for i in plist[0].split(":") ] ll[nr + 9] = dict(zip(formatlist, plist[1]....
def unpack_str(bytes): """Convert a list of bytes to a string.""" return b''.join(bytes).decode("utf-8")
def _to_mask_bits(size): """Create a 32-bit integer representing a mask of the given # of bits""" mb = 0 for bs in range(31, 31 - size, -1): mb = mb | 1 << bs return mb
def assert_that_rectangles_do_not_overlap(rectangles): """given a list of rectangles and a description (any string) verify that all the rectangles are disjoint. The rectangles list consists of tuples, containing a rectangle and a description""" def geometry_to_string(rectangle): return '%dx%d%+d...
def flatten(xs): """ Flatten any recursive list or tuple into a single list. For instance: - `flatten(x) => [x]` - `flatten([x]) => [x]` - `flatten([x, [y], [[z]]]) => `[x, y, z]` """ if isinstance(xs, (list, tuple)): return [y for ys in [flatten(x) for x in xs] for y in ys] return [xs]
def is_rejected_with_high_vaf(vaf, status, vaf_th): """Check if SNV is rejected with vaf over threshold. Args: vaf: vaf of the SNV. vaf_th: vaf threshold. status: reject/pass status of SNV. Returns: True if rejected, False otherwise """ if vaf > vaf_th and status =...