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def flatten_list(lst): """ this is the fastest """ out = [] for sublist in lst: out.extend(sublist) return out
def join_sequence_of_dicts(seq): """ Joins a sequence of dicts into a single dict Parameters ---------- seq: sequence Sequence of dicts to join Returns ------- dict Raises ------ RuntimeError if a duplicate key is encountered. """ r = {} for d in seq: ...
def _is_variable_argument(argument_name): """Return True if the argument is a runtime variable, and False otherwise.""" return argument_name.startswith('$')
def rem_file_ext(filename): """Returns the filename without extension.""" pos = filename.rfind('.') if pos > -1: return filename[:pos] else: return filename
def tarjan_scc(graph): """ Tarjan's partitioning algorithm for finding strongly connected components in a graph. """ index_counter = [0] stack = [] lowlinks = {} index = {} result = [] def strongconnect(node): index[node] = index_counter[0] lowlinks[node] = index_co...
def compare_dict(lhs, rhs): """Implements dictionary comparison for Python 2 and 3 alike""" lhs_sorted = sorted(lhs, key=lambda x:sorted(x.keys())) rhs_sorted = sorted(rhs, key=lambda x:sorted(x.keys())) return (lhs_sorted > rhs_sorted) - (lhs_sorted < rhs_sorted)
def UrlEscape(url): """Scapes XML entities. Args: url: potentially with XML invalid characters. Returns: same URL after replacing those with XML entities. """ return url.replace("'", "&apos;").replace("'", "&quot;")
def format_hex(hex_num, num_digits): """Formats hex numbers with set number of digits and upper case letters""" return "{0:#0{1}X}".format(hex_num, num_digits + 2)
def substr_surrounded_by_chars(full_str, char_pair, offset=0): """ Extract substring surrounded by open & close chars. For example, 'value: { k1: v1, k2: v2 }' :param full_str: target string. :param char_pair: a tuple contains open & close tag. :param offset: Start point to search substring. ...
def model_potentialtranspiration(evapoTranspiration = 830.958, tau = 0.9983): """ - Name: PotentialTranspiration -Version: 1.0, -Time step: 1 - Description: * Title: PotentialTranspiration Model * Author: Pierre Martre * Reference: Modelling ener...
def non_basemap_layers(layers): """Retrieve all map layers which are not basemaps""" return [layer for layer in layers if not layer.is_basemap]
def interp(start, end, frac): """2D linear interpolation""" # diff = end - start # return start + (frac * diff) diff = (end[0] - start[0], end[1] - start[1]) return ( start[0] + frac * diff[0], start[1] + frac * diff[1])
def get_login_post_result_form(uuid): """ Assemble form for get_login_post_result :param uuid: UUID from get_login_result :return: Form in dict """ post_data_dict = dict() post_data_dict['act'] = '2' post_data_dict['ret'] = '0' post_data_dict['message'] = "" post_data_dict['uid']...
def update_sequence(s, n, x): """Return a tuple copy of s with the nth element replaced by x.""" t = tuple(s) if -len(t) <= n < len(t): return t[0:n] + (x,) + t[n + 1 : 0 if n == -1 else None] else: raise IndexError("sequence index out of range")
def add_brackets_around_string(word: str): """Adds square brackets for single character strings and round the rest. """ if len(word) == 1 or (len(word) == 2 and word.startswith('\\')): return word return '(?:' + word + ')'
def check_user_sync_agent_type(json): """ Check type of incoming user statement. :param json: A user statement. :type json: dict(str, NoneType) :return: The type of the verb of the statement. :rtype: str """ obj_type = json['statement']['verb']['display']['en'] return obj_type
def find_not_in_icd_set(lenoforginalset, numbers_set): """This function will find all the icd codes (represented as numbers) not in a given set.""" originalset = [str(i) for i in range(1, lenoforginalset+1, 1)] numbers_not_in_set = list(set(originalset)-set(numbers_set)) numbers_not_in_set = sorte...
def __copy__(self) : """Return a copy of self""" return type(self)(self);
def formatsource(value, endangerment=False): """ >>> formatsource({'bibfile': 'hh', 'bibkey': '23'}) '**hh:23**' >>> formatsource({'bibfile': 'hh', 'bibkey': '23', 'pages': '1-23'}) '**hh:23**:1-23' >>> formatsource({'bibfile': 'hh', 'bibkey': '23', ... 'pages': '1-23', 'tri...
def precision(overlap_count, guess_count): """Compute the precision in a zero safe way. :param overlap_count: `int` The number of true positives. :param guess_count: `int` The number of predicted positives (tp + fp) :returns: `float` The precision. """ if guess_count == 0: return 0.0 retur...
def flatten(x): """Returns the flattened list or tuple.""" if len(x) == 0: return x if isinstance(x[0], list) or isinstance(x[0], tuple): return flatten(x[0]) + flatten(x[1:]) return x[:1] + flatten(x[1:])
def _fix_unicode(text): """Convert a partial unicode string to full unicode""" return text.encode('utf-8', 'surrogateescape').decode('utf-8')
def rgb_to_hex(r, g, b): """Turn an RGB float tuple into a hex code. Args: r (float): R value g (float): G value b (float): B value Returns: str: A hex code (no #) """ r_int = round((r + 1.0) / 2 * 255) g_int = round((g + 1.0) / 2 * 255) b_int = round((b + 1...
def hard(first, *args, x, **kwargs): """A harder test of how command-line args are mapped to parameters.""" return first, args, x, sorted(kwargs.items())
def _get_limit(order_field, start=None, end=None): """ Produces a SQL condition the order_filed to be between start and end.""" query = "" if start is None and end is None: return None if start: query+="{0}>={1}".format(order_field, start) if end: if start: q...
def check_lenght_message_complete_with_dont_care(message,fixed_lenght = 245): """ This function check the lenght a message(bytes), and if the lengh it's not equal to fixed_lenght,the message it's modified, append 'X' character, until have the specific lenght @param message: (bytes) bytes coded at utf-8 @param fi...
def gentaglist(sublist, checkname, hostname): """Generate a tag list for passing to tag checking.""" # Constants taglist = ["all"] # remove domain names from hostname hostname = hostname.split('.')[0] # Build our taglist taglist += sublist taglist.append(hostname) taglist.append(chec...
def filter_ending(registration_number: str, items: list): """ Get a subset of the provided list that excludes items that were not removed for the specified registration number :param registration_number: The registration number to filter out items for :param items: A list of items to be filtered. Must ...
def validate_domain_to_record(domain): """ remove TLD part of validate domain record Args: domain: validate domain(include _acme-challenge.[input_domain] Returns: _acme-challenge.[input_domain_without_TLD] """ domain_list = domain.split('.')[:-2] if len(domain_list) > 0 and d...
def luhn(card): """ Credit Card Validator with Mod 10, or Luhn algorithm refering to it's creator 'Hans Peter Luhn' """ # return sum(map(int, str(card)[1::2]+str(card)[0::2]*2))%10==0 card=str(card).replace(' ','') return (sum(map(int, str(card)[1::2])) + \ sum(sum(map(int, str(i*2))) fo...
def to_text(string): """Ensure that the string is text.""" if callable(getattr(string, 'decode', None)): return string.decode('utf-8') return string
def coding_problem_49(arr): """ Given an array of numbers, find the maximum sum of any contiguous subarray of the array. For example, given the array [34, -50, 42, 14, -5, 86], the maximum sum would be 137, since we would take elements 42, 14, -5, and 86. Given the array [-5, -1, -8, -9], the maximum su...
def compare_integers(first, second): """ Returns the greater of the two integers :param first: :param second: :return: int """ return max(int(first), int(second))
def in_percent(value, total, round_at=2): """ given input in percent and round to given value :param value: number of some ratings :param total: total number of all ratings :param round_at: value to round at :return: float: rounded value in percent """ return round((value / total) * 100, round_at)
def filter_not_none(iterable): """Filter out None values in given iterable collection. Parameters ---------- iterable : collections.Iterable The iterable collection to be filtered. Returns ------- list Returns the list of non-None elements. """ return [i for i in it...
def escape_cdata(cdata): """Escape a string for an XML CDATA section""" return cdata.replace(']]>', ']]>]]&gt;<![CDATA[')
def reverse_json_ambi( json_ambi: dict, ids: set) -> dict: """ Reverse a dict (values as keys, keys as list values). Parameters ---------- json_ambi : dict A dict having one string value per key. ids : set sample IDs from the biom table. Returns ------- ...
def __pair_maximizer(alpha_pairs, pair): """ Helping method, maximizing pairs """ for alt in alpha_pairs: if pair != alt and pair[0].issubset(alt[0]) and pair[1].issubset(alt[1]): return False return True
def string_concatenator(string1, string2): """Combines strings together by adding them and returning the combination as an output. Parameters ---------- string1 : string String that will be added to another string. string2 : string String that will be added to anot...
def get_full_tag(repository, target, version_tag, os_tag): """ Constructs a tag, excluding the OS_TAG if it is empty. Additionally ignores the target when it is the default target "kudu". Examples: get_tag "kudu" "latest" "" = apache/kudu:latest get_tag "base" "1.8.0" "" = a...
def binaryPlusOne(operand): """ Adds 1 to the binary string operand. No safety,i.e.: operand is assumed to be a string, with only binary content 9i.e.: 0s or 1s), however a string may be returened only if it has the same length as operand. """ #print(str(operand)) length = len(o...
def element_product(x): """ Return the product of all the element in list x Parameters ---------- x (list): list of int numbers Return ------ product (float): the greatest product of size n """ if not x: return None if 0 in x: return 0 product = 1 for ele...
def get_parameters_options(tuple_options): """ :param tuple_options: List of tuples of option name and value :return: Dictionary of parameters key and value :rtype: dict """ return {k: v for k, v in tuple_options if v is not None}
def remove_duplicates(nonunique): """Remove duplicate values in a list. Args: nonunique (list) - a list of values Returns: a list of the unique values in the nonunique list Example: unique_values(['a', 'a', 'b', 'c']) --> ['a', 'b', 'c'] """ un...
def read_template_source(filename): """Read the source of a RiveScript template, returning the Unicode text.""" try: # v0.2.0: Issue #3 with open(filename, 'r', encoding='utf-8') as f: text = f.read() except Exception: # v0.2.0: Issue #3 text = '' ...
def is_a_match(input_string, guess_word): """ input_string: string, the user input to be spellchecked guess_word: string, the word from the wordlist to be checked against input_string returns: bool, True if every letter in guess_word is in input_string in order with double characters being given for...
def hasmethod(obj, method_name): """Return True if obj.method_name exists and is callable. Otherwise, return False.""" obj_method = getattr(obj, method_name, None) return callable(obj_method) if obj_method else False
def pixel_perf_metrics(tp, fp, tn, fn, performanceMetricType): """ A function that calculates the performance metric for a pixel-based problem. """ n = tp + fp + tn + fn pre = ((tp+fp)*(tp+fn) + (fn+tn)*(tn+fp)) / (n*n) pcc = (tp + tn) / n prec = tp / (tp + fp) recall =...
def find_seq_rec(block, name, case_sensitive=True): """Given part of a sequence ID, find the first matching record.""" if case_sensitive: def test(name, rec): return name in rec['id'] else: def test(name, rec): return name.upper() in rec['id'].upper() for rec in ...
def get_checked_sites(df): """ Returns list of sites that have already been analyzed :param df: pandas dataframe containing results from reports or parameter study. :return: List with sites that have already been analyzed. """ if df is not None: checked_sites = df['site'].unique().tolis...
def box_params(dict_filters, dict_pagination, maybe_sort=None): """Mash all the disparate params together into one dict.""" boxed_filters = {} for key, value in dict_filters.items(): boxed_filters['filter[{0}]'.format(key)] = value boxed_pagination = {} for key, value in dict_pagination.it...
def validate_eyr(field): """ eyr (Expiration Year) - four digits; at least 2020 and at most 2030. """ return field.isdigit() and 2020 <= int(field) <= 2030
def add_include_in_ports(step_json: dict, included_ids: list): """Add sbg:includeInPorts key to d2 apps for inputs included in ports""" if step_json['cwlVersion'] == 'sbg:draft-2': for j, inp in enumerate(step_json['inputs']): if inp['id'] in included_ids: step_json['inputs']...
def shiftdialogs(dialogs, offset): """Shifts dialogs ((from, to), txt) by the given amount of offset""" ret = [((a+offset,b+offset), txt) for (a, b), txt in dialogs] return ret
def split(str, delimiters, joiner=None): """Split a string into pieces by a set of delimiter characters. The resulting list is delimited by joiner, or the original delimiter if joiner is not specified. Examples: >>> split('192.168.0.45', '.') ['192', '.', '168', '.', '0', '.', '45'] >>> s...
def write_rex_file(bytes, path: str): """Write to disk a rexfile from its binary format""" new_file = open(path + ".rex", "wb") new_file.write(bytes) return True
def typename(obj, docp=False, qualp=False): """Typename of the obj object retval-> module:obj<doc> when obj is callable and qualp=False module:class.obj<doc> when obj is callable and qualp=True module:class<doc> when obj is a class or an instance of a class ...
def join_arg(arg_name, arg_type, mode='i'): """make string with procedure arguments""" if mode == 'o': out_s = 'OUT ' else: out_s = '' return '%s%s %s' % (out_s, arg_name, arg_type)
def intersect2Lists(l1, l2): """AND 2 posting lists --> return a list""" p1 = p2 = 0 resultDocs = [] while p1 < len(l1) and p2 < len(l2): if l1[p1] == l2[p2]: resultDocs.append(l1[p1]) p1 = p1 + 1 p2 = p2 + 1 elif (l1[p1]) < (l2[p2]): p1 = p1 + 1 else: p2 = p2 + 1 return resultDocs
def dict_deep_merge(source: dict, destination: dict) -> dict: """Deep merges source dict into destination dict.""" # https://stackoverflow.com/a/20666342 for key, value in source.items(): if isinstance(value, dict): # get node or create one node = destination.setdefault(key, ...
def chr_length(chr_id): """ Return the chromosome length for a given chromosome, based on the reference genome hg38.""" #The data of chromosome length was taken from https://www.ncbi.nlm.nih.gov/grc/human/data?asm=GRCh38 length_dict = {'chr1': 248956422, 'chr2': 242193529, 'chr3': 198295559, 'chr4': 1902145...
def btw(inputString, lh, rh): """Extract a string between two other strings.""" return inputString.split(lh, 1)[1].split(rh, 1)[0]
def strip_parens(s): """Strip parentheses around string""" if not s: return s if s[0] == "(" and s[-1] == ")": return strip_parens(s[1:-1]) else: return s
def ListToString(alist, useAssert=False): """Convert a list of strings into a single string alist is the list to be converted into a string if useAssert is True, then the function checks whether all elements of alist are strings before proceeding""" if useAssert: assert all([isinstance(x, str) for x in alist]), "...
def is_block(node: dict) -> bool: """Check whether a node is a block node.""" return node.get('_type') == 'block'
def to_hass_level(level): """Convert the given Vantage (0.0-100.0) level to HASS (0-255).""" return int((level * 255) / 100)
def jumpTable(prefix, *args): """ Return a string consisting of a series of <a href='#prefix-xxx'>xxx</a>. Include <font size='1'></font> around all of it. """ header = "<font size='1'>" sep = "" for table in args: header = header + sep + "<a href='#" + prefix + "-" + table + "'>" + ...
def normalise_two_digit_year(y): """ Given a year string, which could be 2 digits, try and get a 4 digit year out of it as a string """ if y[0] == "'": y = y[1:] if int(y) < 39: return '%04d' % (int(y) + 2000) elif int(y) < 100: return '%04d' % (int(y) + 1900) els...
def superclass(cls): """ Return the super class of the given class. NOTE: This breaks for multiple inheritance, but we don't support that. """ mro = cls.__mro__ if len(mro) > 1: return mro[1] return None
def get_string_names(elems, names, label): """ Transform the list of values into a string to write elems is a dictionary with the values names is the selected keys we want for the output label is the model label """ # Start to write the output string ss = "" for name in names: ...
def get_newest(fromlist): """ get_newest(fromlist) where fromlist is a list of DataObjects Get the newest timestamp out of all the timestamps in the DataObject list. """ newest_timestamp = 0 for obj in fromlist: if obj.newest_sample > newest_timestamp: newest_timestamp = obj.newest_sample return...
def escape_latex_characters(line): """ Replace a string with the escaped LaTeX version of reserved characters :param line: a string to be used in a LaTeX template :return: a string with the escaped LaTeX version of reserved characters """ line = line.replace('\\', '\\textbackslash') line = l...
def contfrac_to_rational(frac): """ Convert Continued Fraction to Rational Args: frac: Continued Fraction List Return: x : numerator y : denominator """ if len(frac) == 0: return (0, 1) num, denom = 1, 0 frac = frac[::-1] while True: t = num num = frac[0] * num + denom deno...
def slow_swap(A, B): """ This is a N(O^2) solution """ n = len(A) sumA = sum(A) sumB = sum(B) for i in range(n): for j in range(n): change = B[j] - A[i] sumA += change sumB -= change if sumA == sumB: return True, A[i],...
def sort_with_noise(key_values, key_values_noisy, reverse=True): """order clean key values with the order sorted by noisy key values""" idx = [i[0] for i in sorted(enumerate(key_values_noisy), key=lambda x:x[1], reverse=reverse)] key_values_resorted = [key_values[i] for i in ...
def get_full_class_name(obj, limit=2): """Gets full class name of any python object. Used for error names""" module = obj.__class__.__module__ if module is None or module == str.__class__.__module__: name = obj.__class__.__name__ else: name = module + "." + obj.__class__.__name__ ret...
def instanceof(obj, classinfo): """Wrap isinstance to only return True/False""" try: return isinstance(obj, classinfo) except TypeError: # pragma: no cover # No coverage since we never call this without a class, # type, or tuple of classes, types, or such tuples. return Fals...
def internal_server_error(error): """Error to catch internal server error""" return {"status": 500, "error": "Internal error!"}, 500
def aq_ods_color(*args) -> str: """ Return a color from a hexadecimal value. @param color. Hexadecimal value. """ if len(args) == 1: return hex(args[0])[2:] else: return "%02x%02x%02x" % (args[0], args[1], args[2])
def price_average(lst): """ Returns the average price of the given book :param lst: :return: """ return sum(lst) / len(lst)
def packHexStrings(valueDict): """Converts a dictionary of lists of floats into a dictionary of lists of hex values arrays""" hexes = {} for entry in valueDict: # uglier loop done for compatability with cython hexes[entry] = [" ".join(float.hex(float(value)) for value in valueDict[entry])] retu...
def compile_customization(data): """Compile input string for resolution customization. Args: data (str): A sentence with customization data. Returns: dict: A dict contains customization info. """ data=data.split(" ") optional_data...
def undecorated_component(component): """Returns the given component string without leading/trailing whitespace and quotation marks.""" return component.strip(" \t\r\n\"'")
def my_function(my_list): """ | change format | | Args: | my_list(list): vector list | | Returns: | list: new format """ return list(dict.fromkeys(my_list))
def rotate(s, n): """ Circularly rotate s by n positions. """ return s[n:] + s[:n]
def is_vowel(letter): """Return True if the letter is a vowel, False otherwise >>> is_vowel("a") True >>> is_vowel("b") False """ return letter in "aeiou"
def strip_unsupported_schema(base_data, schema): """ Strip keys/columns if not in SCHEMA """ return [ {key: value for key, value in place.items() if key in schema} for place in base_data ]
def add_namespace(element): """ Adds the namespace to the quakeml xml elements. """ return "{http://quakeml.org/xmlns/bed/1.2}" + element
def make_keys_multicol(columns_to_update_lst): """ returns keys to be updated and new names of columns to be updated :param columns_to_update_lst: :return joined_str: part of postgres query with keys. E.g. "col1=c.updatecol1 , col2=c.updatecol2" update_lst: list of new column...
def dict_key_or_default(d, key, default=None): """Avoid if key in d d[key] else None """ if key in d: return d[key] return default
def compatibility(i, j, i_n, j_n): """ Defines the compatibility function """ distance = ((i - i_n)**2.0 + (j - j_n)**2.0)**0.5 return 1 if distance > 0 else 0 # return distance > 0
def limit(requestContext, seriesList, n): """ Takes one metric or a wildcard seriesList followed by an integer N. Only draw the first N metrics. Useful when testing a wildcard in a metric. Example: .. code-block:: none &target=limit(server*.instance*.memory.free,5) Draws only the first 5 instance'...
def selection_sort(arr: list) -> list: """ Sort a list to non-decreasing order using selection sort :param arr: random list or array :return: sorted list """ n = len(arr) for i in range(n): min_item = i for j in range(i+1, n): if arr[j] < arr[min_item]: ...
def cell_to_sites(p): """Turn a cell ``((i0, j0, k0), (di, dj, dk))`` into the sites it contains. Examples -------- >>> cell_to_sites([(3, 4), (2, 2)]) ((3, 4), (3, 5), (4, 4), (4, 5)) """ (i0, j0, k0), (di, dj, dk) = p return tuple((i, j, k) for i in range(i0,...
def isEqual(lhs, rhs): """types should be a either a list, tuple, etc""" for x,y in zip(lhs, rhs): if x == y: continue else: return False return True
def __convertLevel(level, table): """ Convert yum logging levels using a lookup table. """ # Look up level in the table. try: new_level = table[level] except KeyError: keys = sorted(table.keys()) # We didn't find the level in the table, check if it's smaller # than the sm...
def elf_hash(some_bytes: bytes): """The ELF hash (Extremely Lossy Function - also used in ELF format). unsigned long ElfHash(const unsigned char *s) { unsigned long h = 0, high; while (*s) { h = (h << 4) + *s++; if (high = h & 0xF0000000) h ^= high >> 24;...
def to_address(ptr: int): """Convert a ROM pointer to an address.""" if ptr < 0x8000000 or ptr > 0x9FFFFFF: return -1 return ptr - 0x8000000
def _escape_filename(filename): """Turns a file into a string representation with correctly escaped backslashes""" repr = str(filename) repr = repr.replace('\\', '\\\\') return repr
def distance(point1, point2): """ Distance between two points :param tuple point1: first point coordinates (1, 2) :param tuple point2: second point coordinates (3.0, 4) :return: line segment length :rtype: float >>> distance((0, 0) (3, 4.0)) 5.0 """ x1, y1 = point1 x2, y2 =...