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def find_root_visual(conn): """Find the xcffib.xproto.VISUALTYPE corresponding to the root visual""" default_screen = conn.setup.roots[conn.pref_screen] for i in default_screen.allowed_depths: for v in i.visuals: if v.visual_id == default_screen.root_visual: return v
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import re def creole_slugify(value): """Convert the given string to a slug consistent with heading IDs used by our creole parser. >>> creole_slugify("Only 20%!") "only-20" """ if not value: return value # Only keep alphanumeric and space characters. value = re.sub(r"[^a-zA-Z...
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def previous_line(view, sr): """sr should be a Region covering the entire hard line""" if sr.begin() == 0: return None else: return view.full_line(sr.begin() - 1)
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def predecessor_to_forwarding(predecessor, source): """ Compute a forwarding table from a predecessor list. """ # Create variable to return (forwarding-table dictionary) FT = {} # Loop over all nodes that AREN'T the source for (key, value) in predecessor.items(): if (key != source)...
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def async_wraps(cls, wrapped_cls, attr_name): """Similar to wraps, but for async wrappers of non-async functions.""" def decorator(func): func.__name__ = attr_name func.__qualname__ = ".".join((cls.__qualname__, attr_name)) func.__doc__ = """Like :meth:`~{}.{}.{}`, but async. ...
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def _get_trigger(model, machine, trigger_name, *args, **kwargs): """Convenience function added to the model to trigger events by name. Args: model (object): Model with assigned event trigger. machine (Machine): The machine containing the evaluated events. trigger_name (str): Name of the ...
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import argparse def _get_parser(): """Return :class:`argparse.ArgumentParser`.""" parser = argparse.ArgumentParser( description=__doc__ ) parser.add_argument( '-f', '--force', dest='force', help='Force installation of packages.', action='store_true', ) parser...
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import os def os_cwd(): """Returns the pathlib object for the current working directory Examples: >>> os_cwd()\n '/home/cooluser/pyplay' """ return os.getcwd()
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import pandas def from_timestamp_to_datetime(timestamp, unit='ms'): """ :param timestamp: timestamp in unix format. :param unit: measurement unit used in the timestamp. :return: the timestamp in date_time format. """ return pandas.to_datetime(timestamp, unit=unit)
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from pathlib import Path import inspect def caller_module() -> Path: """Returns the name of the file containing the module from which this function was called. This ignores all modules located directly inside the parent directory of the current file (tsfile/*).""" this_file_parent = Path(__file__).par...
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def qgrams_to_char(s: list) -> str: """Converts a list of q-grams to a string. Parameters ---------- s : list List of q-grams. Returns ------- A string from q-grams. """ if len(s) == 1: return s[0] return "".join([s[0]] + [s[i][-1] for i in range(1, len(s))])
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def traverse(coord, np_mask, coord_str): """Edge case: if pixel value in mask is 0 at coord, then bounding box has captured the extreme points in this corner of the image """ x, y = coord if np_mask[y, x] == 0.0: return (x, y) height, width = np_mask.shape store_x, store_y = 0,...
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def iterate_module_func(m, module, func, converged): """Call function func() in specified module (if available) and use the result to adjust model convergence status. If func doesn't exist or returns None, convergence status will not be changed.""" module_converged = None iter_func = getattr(module,...
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import re def arguments_from_docstring(doc): """Parse first line of docstring for argument name. Docstring should be of the form ``min(iterable[, key=func])``. It can also parse cython docstring of the form ``Minuit.migrad(self[, int ncall_me =10000, resume=True, int nsplit=1])`` """ if doc...
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def _check_mod_11_2(numeric_string: str) -> bool: """ Validate numeric_string for its MOD-11-2 checksum. Any "-" in the numeric_string are ignored. The last digit of numeric_string is assumed to be the checksum, 0-9 or X. See ISO/IEC 7064:2003 and https://support.orcid.org/knowledgebase/artic...
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import json def get_stored_username(): """get stored username if available""" file_name = 'chapter_10/remember.json' try: with open(file_name) as f_o: usern = json.load(f_o) except FileNotFoundError: return None else: return usern
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def drawbox(img,bbox): """ skeleton function which draws bbox on an img :param img: :param bbox: :return: """ return img
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import os def getFileName(prompt): """Prompts the user for a valid file which it returns. """ while True: fileName = input(prompt+" ") if os.path.exists(fileName): return fileName else: print("File not found! Make sure that the file is inside this directory....
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def gen_cookie(username, hash_password): """ Build secure cookie content as a string containing: - content length (excluding length itself) - role_name - 16 first chars of the hash password Part of hash password is there for 2 main reasons: 1/ If the cookie secret key is st...
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def str_to_state(str_state): """ Reads a sequence of 9 digits and returns the corresponding state. """ assert len(str_state) == 9 and sorted(str_state) == list('012345678') return tuple(int(c) for c in str_state)
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import argparse def parse_args(): """parsing and configuration""" parser = argparse.ArgumentParser(description="Generate ImageNet10 using BigGAN") # for training generative model parser.add_argument('--gan_type', type=str, default='BigGAN', help='The type of GAN') parser.add_argument('--dataset',...
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def get_collection_table_name(node, intermine_model): """ Get the table name for this collection :param node: :param intermine_model: :return: (table-name, reference-column-name). table-name will be null if there isn't a collection table for this node """ if 'reverse-reference' in ...
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def _readdir(DIR): """Implementation of perl readdir in scalar context""" try: result = (DIR[0])[DIR[1]] DIR[1] += 1 return result except IndexError: return None
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def compute_normalization(data): """ Write a function to take in a dataset and compute the means, and stds. Return 6 elements: mean of s_t, std of s_t, mean of (s_t+1 - s_t), std of (s_t+1 - s_t), mean of actions, std of actions """ l = [] for a in [data['observations'], (data['next_observatio...
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def dictize(aniter, mode, initial=None): """iter must contain (key,value) pairs. mode is a string, one of: replace, keep, tally, sum, append, or a custom function that takes two arguments. replace: default dict behavior. New value overwrites old if key exists. This is essentially a pass-thru. ...
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def find_replace_line_endings(fp_readlines): """ special find and replace function to clean up line endings in the file from end or starttag characters """ clean = [] for line in fp_readlines: if line.endswith("=<\n"): line = line.replace("<\n", "lt\n") clean.appe...
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def read_txt_file(file_path, n_num=-1, code_type='utf-8'): """ read .txt files, get all text or the previous n_num lines :param file_path: string, the path of this file :param n_num: int, denote the row number decided by \n, but -1 means all text :param code_type: string, the code of this file ...
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import math def pow(x, y): """Return the logarithm of x with base y (default to e)""" if x <= 0 and not isinstance(y, int): raise ValueError(f"Exponent must be an integer if negative base. Received base {x} with exponent {y}.") return math.pow(x, y)
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def sum_while_same(xs, x): """Sum points for same date representation""" if not xs: return [x] if xs[-1][0] == x[0]: return xs[:-1] + [(xs[-1][0], xs[-1][1] + x[1])] else: return xs + [x]
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import torch def l1_loss(pred_traj, pred_traj_gt): """ Input: :param pred_traj: Tensor of shape (batch, seq_len)/(batch, seq_len). Predicted trajectory along one dimension. :param pred_traj_gt: Tensor of shape (batch, seq_len)/(batch, seq_len). Groud truth predictions along on...
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import time def splitting_division_semi(f, group, table, sample_indices, splitting_fold): """Saving indices of each splitting group to a list that will be fed later to the deep learning model. Specific for the semi_resampling strategy, since there only training and validation need to be splitted.""" t0 = ...
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def get_short_description(dict, value): """Get layout class based on value.""" return dict.get(value, {}).get('short_description')
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def _is_subexpansion_optional(query_metadata, parent_location, child_location): """Return True if child_location is the root of an optional subexpansion.""" child_optional_depth = query_metadata.get_location_info(child_location).optional_scopes_depth parent_optional_depth = query_metadata.get_location_info(...
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def _filter_labels(text, labels, allowed_labels): """Keep examples with approved labels. :param text: list of text inputs. :param labels: list of corresponding labels. :param allowed_labels: list of approved label values. :return: (final_text, final_labels). Filtered version of text and labels ...
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import math def Q(fastev,lagev,fastrc,lagrc): """Following Wuestefeld et al. 2010""" omega = math.fabs((fastev - fastrc + 3645)%90 - 45) / 45 delta = lagrc / lagev dnull = math.sqrt(delta**2 + (omega-1)**2) * math.sqrt(2) dgood = math.sqrt((delta-1)**2 + omega**2) * math.sqrt(2) if dnull < dgo...
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def array_check(lst): """ Function to check whether 1,2,3 exists in given array """ for i in range(len(lst)-2): if lst[i] == 1 and lst[i+1] == 2 and lst[i+2] == 3: return True return False
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from typing import List from typing import Any def list_difference(list_1: List[Any], list_2: List[Any]) -> List[Any]: """ This Function that takes two lists as parameters and returns a new list with the values that are in l1, but NOT in l2""" differ_list = [values for values in list_1 if values no...
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def format_feedback(feedback_row, study): """Updates the feedback dict with the new information.""" formatted_feedback_row = { "success": { study.get_single_field(field["field_id"]).field_name: field["field_value"] for field in feedback_row["success"] }, "failed":...
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def correlation(self, column_a, column_b): """ Calculate correlation for two columns of current frame. Parameters ---------- :param column_a: (str) The name of the column from which to compute the correlation. :param column_b: (str) The name of the column from which to compute the correlation....
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import numpy as np def uv2spd_dir(u,v): """ converts u, v meteorological wind components to speed/direction where u is velocity from N and v is velocity from E (90 deg) usage spd, dir = uv2spd_dir(u, v) """ spd = np.zeros_like(u) dir = np.zeros_like(u) spd = np.sqrt(u**2 + v**2) ...
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from typing import List from typing import Dict def parse_idf(content: str) -> dict: """Parse an IDF file into a dictionary.""" sections = content.rstrip().split(';') sub_sections: List[List[str]] = [] obj_dict: Dict[str, List[List[str]]] = {} for sec in sections: sec_lines = sec.splitline...
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import pkg_resources def get_version(): """Returns version""" return pkg_resources.get_distribution("rosetta-cipher").version
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def good_fft_number(goal): """pick a number >= goal that has only factors of 2,3,5. FFT will be much faster if I use such a number""" assert goal < 1e5 choices = [2**a * 3**b * 5**c for a in range(17) for b in range(11) for c in range(8)] return min(x for x in choic...
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def connect_to_ecs(env): """ Return boto connection to the ecs in the specified environment's region. """ rh = env.resource_handler.cast() wrapper = rh.get_api_wrapper() client = wrapper.get_boto3_client( 'ecs', rh.serviceaccount, rh.servicepasswd, env.aws_region ...
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def infotodict(seqinfo): """Heuristic evaluator for determining which runs belong where allowed template fields - follow python string module: item: index within category subject: participant id seqitem: run number during scanning subindex: sub index within group """ info = {'test':[]...
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def rotated_array_search(input_list, number): """ Find the index by searching in a rotated sorted array """ high = len(input_list) - 1 low = 0 while low <= high: mid = (low + high) // 2 if input_list[mid] == number: return mid elif input_list[mid] < number <= ...
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from typing import Optional def has_at_least_one_share_class(filing_json, filing_type) -> Optional[str]: # pylint: disable=too-many-branches """Ensure that share structure contain at least 1 class by the end of the alteration or IA Correction filing.""" if filing_type in filing_json['filing'] and 'shareStruc...
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import builtins def no_matplotlib(monkeypatch): """ Mock an import error for matplotlib""" import_orig = builtins.__import__ def mocked_import(name, globals, locals, fromlist, level): """ """ if name == 'matplotlib.pyplot': raise ImportError("This is a mocked import error") ...
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import tqdm def create_tqdm_reader(reader, max_reads=None): """Wrap an iterable in a tqdm progress bar. Args: reader: The iterable to wrap. max_reads: Max number of items, if known in advance. Returns: The wrapped iterable. """ return tqdm.tqdm(reader, total=max_r...
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def calc_U_slip_quasisteady(eps, E, x, mu): """ Slip velocity (quasi-steady limit) """ u_slip_quasisteady = -eps*E**2*x/(2*mu) return u_slip_quasisteady
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import math def get_sequence_of_considered_visits(max_num_considered_actions, num_simulations): """Returns a sequence of visit counts considered by Sequential Halving. Sequential Halving is a "pure exploration" algorithm for bandits, introduced in "Almost Optimal Explorati...
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def two_node_diff(a): """Calculate and return diffs over two nodes instead of one.""" N = len(a) return a[2:] - a[:(N-2)]
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import datetime import os def make_savedir(parent_dir='./'): """ make directory to save results Params ---------- parent_dir : str parent directory to save results """ if parent_dir[-1] != '/': parent_dir += '/' orig_dirname = datetime.datetime.now().strftime('%y%m%d_...
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def _get_timeout(payload_len): """Conservatively assume min 5 seconds or 3 seconds per 1MB.""" return max(3 * payload_len / 1024 / 1024, 5)
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def _validate_int( setting, value, option_parser, config_parser=None, config_section=None ) -> int: """Validate an integer setting.""" return int(value)
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def get_best_name(phenomena): """ Create a best_name field which takes the best name as defined by the preference order :param phenomena: phenomena attributes in form [{"name":"standard_name","value":"time"},{"name":"---","value":"---"},{}...] :return: best_name(string) """ preference_order = ["...
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def get_global_evidence(a): """ PyMultiNest's Analyzer has a get_stats() method, but it's a bit too sluggish if all we want is to get the global evidence out. This is a hack around the issue. """ stats_file = open(a.stats_file) lines = stats_file.readlines() stats = {} a._read_error_...
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def buildRecorderDicts(energyInterval, powerInterval, voltageInterval, energyPowerMeter, triplexGroup, recordMode, query_buffer_limit): """Helper function to construct dictionaries to be used by individuals to add recorders to their own models. Note that th...
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def sub(arg1, arg2): """ Function that subtracts two arguments. """ return arg1 - arg2
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def query_for_data(driver): """Grab all relevant data on a jobs page. Return: ------ job_titles: list job_locations: list posting_companies: list dates: list hrefs: list """ job_titles = driver.find_elements_by_xpath( "//span[@itemprop='tit...
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import typing def split_line(line: str) -> typing.Tuple[str, str]: """ Separates the raw line string into two strings: (1) the command and (2) the argument(s) string :param line: :return: """ index = line.find(' ') if index == -1: return line.lower(), '' return line[:ind...
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from typing import List def matrix_transpose(mat: List[List]) -> List[List]: """ >>> matrix_transpose([[1, 2], [3, 4], [5, 6]]) [[1, 3, 5], [2, 4, 6]] """ if len(mat) == 0: raise ValueError("Matrix is empty") return [[mat[j][i] for j in range(len(mat))] for i in range(len(mat[0]))]
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def split_nvr_epoch(nvre: str): """Split nvre to N-V-R and E. This function is backported from `kobo.rpmlib.split_nvr_epoch`. @param nvre: E:N-V-R or N-V-R:E string @type nvre: str @return: (N-V-R, E) @rtype: (str, str) """ if ":" in nvre: if nvre.count(":") != 1: ...
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def findMergeNode(head1, head2): """ Go forward the lists every time till the end, and then jumps to the beginning of the opposite list, and so on. Advance each of the pointers by 1 every time, until they meet. The number of nodes traveled from head1 -> tail1 -> head2 -> intersection point and ...
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import functools import os def cached(producer): """Calls to a function wrapped with this decorator are cached using ``self.cache.lookup``""" @functools.wraps(producer) def wrapper(self): return self.cache.lookup(data_path=os.path.join(self.category_name, producer.__name__), ...
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from dateutil.parser import parse def is_datetime_string(string: str) -> bool: """ Check if the string is date-like. Parameters ---------- string : str Returns ------- is_date: bool """ try: parse(string) return True except ValueError: return Fal...
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def is_valid_perioddata(data): """Check that a dictionary of period data has enough information (based on key names) to set up stress periods. Perlen must be explicitly input, or 3 of start_date_time, end_date_time, nper and/or freq must be specified. This is analogous to the input requirements for ...
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def get_instance_ips(): """ Function to get instance IPs of your servers. Sometimes you'd want to do this, if your IPs are allocated dynamically, e.g. an auto-scaling group within AWS. if you have only one system. you can simpley use localhost or its ip for that. Returns: None """ r...
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from typing import List from typing import Union def __parse_db(db_exp: str) -> List[Union[str, int]]: """ Parse a DB directive returning its contents as a list. :param db_exp: DB directive command. :return: Contents of the db as the directive. """ db_exp_ = db_exp.split(" ", 1)[1] db_para...
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def _fspath(path): """Return the path representation of a path-like object. If str or bytes is passed in, it is returned unchanged. Otherwise the os.PathLike interface is used to get the path representation. If the path representation is not str or bytes, TypeError is raised. If the provided path i...
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def hcolor(data, thresholds): """ Multicolor a graph according to thresholds :param data: the data :type data: list of tuples (info, value) :param thresholds: dict of thresholds, format {<threshold>: <color>,} :type thresholds: dict :return: the colored graph :rtype: list of arrays ...
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def euler_problem_6(n=100): """ The sum of the squares of the first ten natural numbers is, 1^2 + 2^2 + ... + 10^2 = 385 The square of the sum of the first ten natural numbers is, (1 + 2 + ... + 10)^2 = 55^2 = 3025 Hence the difference between the sum of the squares of the first ten natural numb...
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def _parse_http_429_5xx_retry_after(result=None, **ignored): """Return seconds to throttle""" assert result is not None, """ The signature defines it with a default value None, only because the its shape is already decided by the IndividualCache's.__call__(). In actual code path,...
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def inject_local_assets(): """only ever run from forge-generate""" return [ {'when': {'platform_is': 'ios'}, 'do': {'inject_local_assets': ()}}, {'when': {'platform_is': 'android'}, 'do': {'inject_local_assets': ()}}, ]
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def freedom(L=5): """ DOES NOT DO ANYTHING """ return -1
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def get_num_classes(dataset_name: str) -> int: """ Get the number of supervised loss given a dataset name. :param dataset_name: dataset name :return: number of supervised class. """ if dataset_name == "cifar10": return 10 elif "cifar100" in dataset_name: return 100 else: ...
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def get_bsse_section(natoms_a, natoms_b, mult_a=1, mult_b=1, charge_a=0, charge_b=0): """Get the &FORCE_EVAL/&BSSE section.""" bsse_section = { 'FORCE_EVAL': { 'BSSE' : { 'FRAGMENT': [{ 'LIST': '1..{}'.format(natoms_a) }, { ...
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import re def load_placement(placement_file): """ Loads VPR placement file. Returns a tuple with the grid size and a dict indexed by locations that contains top-level block names. """ RE_PLACEMENT = re.compile( r"^\s*(?P<net>\S+)\s+(?P<x>[0-9]+)\s+(?P<y>[0-9]+)\s+(?P<z>[0-9]+)" ) ...
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import os import glob def find_matching_geoloc_file(radiance_filename, myd03_dir): """ :param radiance_filename: the filename for the radiance .hdf, demarcated with "MYD02". :param myd03_dir: root directory of MYD03 geolocational files :return geoloc_filename: the path to the corresponding geolocation...
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def license_path(licenses): """Get license path.""" # return license if there is exactly one license return licenses[0] if len(licenses) == 1 else None
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import glob import os def get_next_run(exp_dir): """ get run id by looking at current exp_dir """ next_run = 0 files = glob.glob(os.path.join(exp_dir, "*.log")) for file in files: filename = os.path.basename(file) run = filename.split('.')[0] id = int(run[3:]) i...
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from datetime import datetime def complete_month(year, month): """ Return a string with the month number padded with zero if the month has only one digit. It is also necessary to provide a year. :param year: :param month: :return: Month number padded with zero. :rtype: str """ return ...
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import glob import os def list_api(file_pattern): """ return list according to file_pattern """ file_list = [f for f in glob.glob(file_pattern)] targets = [] for file in file_list: targets.append(os.path.basename(file).split(".")[0]) return targets
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import sys import os def get_lib_dir(): """ Anaconda specific """ dirname = 'DLLs' if sys.platform == 'win32' else 'lib' libdir = os.path.join(sys.prefix, dirname) return libdir
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def scrub_email(address): """ Remove the local-part from an email address for the sake of anonymity :param address: <str> :return: <str> """ if '@' in address: domain = address.split('@')[1] return 'user@{}'.format(domain) else: return address
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def modify_res(res, cur): """ Преобразует список-результат запроса в свисок словарей""" result = list() for ll in res: temp_dict = dict() for k, v in zip(cur.description, ll): temp_dict[k[0]] = bytes(v) if type(v) is memoryview else v result.append(temp_dict) return r...
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import argparse def params_args(args=None): """ Parse command line arguments :param args: command line arguments or None (default) :return: dictionary of parameters """ # parameters of model and files params = argparse.ArgumentParser(description='Run distribute model simnet bow.') para...
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def symm_area(col, n): """ returns n + (n - 1) + ... + (n - col + 1) i.e., the number of matrix elements below and including the diagonal and from column 0 to column `col` """ return col * (2 * n - col + 1) // 2
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import os def finder(scenario, multiplier, conserve_total): """yield what we can find.""" res = [] for dirname, _dirpath, filenames in os.walk("/i/0/cli"): for fn in filenames: res.append( [f"{dirname}/{fn}", scenario, multiplier, conserve_total] ) retur...
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def find_device(p, tags): """ Find an audio device to read input from """ device_index = None for i in range(p.get_device_count()): devinfo = p.get_device_info_by_index(i) print("Device %d: %s" % (i, devinfo["name"])) for keyword in tags: if keyword in devinfo["n...
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def normalize_lons(l1, l2): """ An international date line safe way of returning a range of longitudes. >>> normalize_lons(20, 30) # no IDL within the range [(20, 30)] >>> normalize_lons(-17, +17) # no IDL within the range [(-17, 17)] >>> normalize_lons(-178, +179) [(-180, -178), (179...
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def extract_list(p): """Check if there is a list after p""" for sibling in p.next_siblings: if sibling.name == 'ul': return [li.text for li in sibling.find_all('li')] if sibling.name == 'p': return None
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def find_true_link(s): """ Sometimes Google wraps our links inside sneaky tracking links, which often fail and slow us down so remove them. """ # Convert "/url?q=<real_url>" to "<real_url>". if s and s.startswith('/') and 'http' in s: s = s[s.find('http'):] return s
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from typing import Tuple def _unmerge_points( board_points: Tuple[int, ...] ) -> Tuple[Tuple[int, ...], Tuple[int, ...]]: """Return player and opponent board positions starting from their respective ace points.""" player: Tuple[int, ...] = tuple( map( lambda n: 0 if n < 0 else n, ...
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import json def from_json_string(my_str): """Returns an object (Python data structure) represented by a JSON string: Arguments: my_str (obj) -- json str Returns: obj -- object """ return json.loads(my_str)
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from typing import Any def to_str(object_: Any) -> str: """ >>> to_str(b"ass") 'ass' >>> to_str("ass") 'ass' >>> to_str(None) '' >>> to_str({"op": "oppa"}) "{'op': 'oppa'}" """ if object_ is None: return "" if isinstance(object_, bytes): return object_....
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def get_bse(da, da_peak_times): """ Takes an xarray DataArray containing veg_index values and calculates the vegetation value base (bse) for each timeseries per-pixel. The base is calculated as the mean value of two minimum values; the min of the slope to the left of peak of season, and the min of...
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def approx_2rd_deriv(f_x0,f_x0_minus_1h,f_x0_minus_2h,h): """Backwards numerical approximation of the second derivative of a function. Args: f_x0: Function evaluation at current timestep. f_x0_minus_1h: Previous function evaluation. f_x0_minus_2h: Function evaluations two timesteps ago....
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def get_dict_key_by_value(val, dic): """ Return the first appeared key of a dictionary by given value. Args: val (Any): Value of the key. dic (dict): Dictionary to be checked. Returns: Any, key of the given value. """ for d_key, d_val in dic.items(): if d_val ==...
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import json def isJson(var=''): """ Check json >>> isJson(var='') False >>> isJson('') False >>> isJson('{}') True """ result = True try: json.loads(var) except Exception as e: result = False return result
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