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import textwrap import yaml def fio_job_dict(): """ Job template for fio workloads. """ template = textwrap.dedent(""" apiVersion: batch/v1 kind: Job metadata: name: fio spec: template: metadata: name: fio spec: ...
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def sieve_of_eratosthene(num): """ Computes prime numbers using sieve of Eratosthenes. :param num: The number to which you need to find prime numbers. :returns: List of prime numbers. """ sieve = list(range(num)) sieve[1] = 0 # All non-prime nums we'll replace by zeros. for checked_n...
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def _format_range_unified(start, stop): """Convert range to the "ed" format""" beginning = start + 1 length = stop - start if length == 1: return '{}'.format(beginning) if not length: beginning -= 1 return '{},{}'.format(beginning, length)
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def greeting(name: str) -> str: """ Construct a greeting. :param name: name of the person or object to greet :return: greeting """ return f"Hello, {name}!" if name else "Hello!"
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def is_literal_value_packet(type: int) -> bool: """Check if the `type` corresponds to a literal value packet""" return type == 4
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def changes_between_snapshots(before_dict, after_dict): """Given two 'snapshots' of an artifacts structure -- 'before' and 'after' -- return a tuple specifying which artifacts have been added, which have been removed, which have been modified, and which have remained unchanged. Both these dictionaries have arti...
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def kernel_name(): """Unless manually modified, python3 should be the name of the current jupyter kernel that runs on the activated conda environment""" return "python3"
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def filename2frame(fn): """Make two lists a shorthand CSV. In other words, unroll the CSV. It's a slightly unusual CSV in that column 0 is always a date, and then there are a *variable* number of subsequent columns that you can think of as word0, word1, ... wordn. This compact / rolled-up structure...
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def transform(dict_, typed_dict) -> dict: """ Convert values in given dictionary to corresponding types in TypedDict . """ fields = typed_dict.__annotations__ try: data = {name: fields[name](value) for name, value in dict_.items()} except ValueError as ve: print(f'Go ValueError for {dict...
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def check_error(error_code): """Converts the UCLCHEM integer result flag to a simple messaging explaining what went wrong" Args: error_code (int): Error code returned by UCLCHEM models, the first element of the results list. Returns: str: Error message """ errors={ -1:"...
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import torch def inference_collate_batch(batch): """Collate a batch of data.""" feat_paths, mels = zip(*batch) return feat_paths, torch.stack(mels)
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def createOrderList(wantedOrder, currentOrder): """ Create an order list that can transform currentOrder to wantedOrder by applying applyOrderList function. An order list is a list that specifies the position of the desired element in a list in the correct order, e.g: order of [3,1,2,4,6]->[1,2,3] which is got by ...
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def track_closed(cls): """Wraps a queue class to track down if close() method was called""" class TrackingClosed(cls): def __init__(self, *a, **kw): super(TrackingClosed, self).__init__(*a, **kw) self.closed = False def close(self): super(TrackingClosed, se...
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def add_vectors(vector_1, vector_2): """Example function. Sums the same index elements of two list of numbers. Parameters ---------- v1 : list List of ints or floats v2 : list List of ints or floats Returns ------- list Sum of lists Notes ----- Thi...
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def parse_scoped_project_queue(scoped_name): """Returns the project and queue name for a scoped catalogue entry. :param scoped_name: a project/queue as given by :scope_queue_name: :type scoped_name: str :returns: (project, queue) :rtype: (str, six.text_type) """ return scoped_name.split('/'...
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def scan_row(row): """get the first and last shaded columns in a row""" start = 0 end = 0 for c, value in enumerate(row): if value: if start == 0: start = c end = c return (start, end)
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def Flickr30k_sentence_data(fn): """ Parses a sentence file from the Flickr30K Entities dataset. :param fn: full file path to the sentence file to parse. :return: a list of dictionaries for each sentence with the following fields: sentence - the original sentence phrases ...
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def convert_to_base(decimal_number, base, fill=0): """" Transform a decimal number to any basis. """ remainder_stack = [] DIGITS = '0123456789abcdef' while decimal_number > 0: remainder = decimal_number % base remainder_stack.append(remainder) decimal_number = decimal_num...
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def is_avcs_table(table): """ True if table of AVC notifications """ phrase = 'attribute value change' return phrase == table.short_title[:len(phrase)].lower()
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import math def pos_transform_resize(angle, x, y, w, h): """ return new coordinates after rotating the image with expandison. :param angle: the rotate angle :param x: coordinate x of any point in the original image :param y: coordinate y of any point in the original image :param w: width of th...
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def valid_conversion(val, type_to_convert): """ Checking whether it is possible to convert val to the specified type :param val: value :param type_to_convert: type :return: boolean """ if isinstance(type_to_convert, type): try: type_to_convert(val) res = True...
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import struct def unpack_ibm32(bytearray_: bytearray, endian: str) -> float: """ Unpacks a bytearray containing the 4 byte IBM floating point value. Works by unpacking a value as an unsigned long and disassembling it bit by bit. `""" # It is 32 bits long. First bit is a sign, then go 7 bits of ...
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def extract_id_from_href(href): """Extract id from an href. 'https://vmware.com/api/admin/user/123456' will return 123456 :param str href: an href :return: id """ if not href: return None if '/' in href: return href.split('/')[-1] return href
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from typing import List def validate(passport_list: List[str]) -> int: """Validate passports. All passports must contain the following parameters. Parameters: - byr (Birth Year) - iyr (Issue Year) - eyr (Expiration Year) - hgt (Height) - hcl (Hair Color) - ecl (Eye Color) - pid (P...
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import argparse def arg_parser(): """ Arg parser for command line arguments. """ parser = argparse.ArgumentParser(prog='update_template') parser.add_argument('nxsfile', help='The nexus file') parser.add_argument('plugin', help='Plugin name') parser.add_argument('param', help='plugin parameter ...
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import math def variation_distance(data1, data2): """ Returns the total variation distance between the distributions represented by data1 and data2 """ union_keys = list(set(data1.keys()) | set(data2.keys())) distance = 0 for key in union_keys: if key in data1: val1 = d...
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def zip_author(author): """ Give a list of author and its affiliation keys in this following format [first_name, last_name, [key1, key2]] and return the output in [[first_name, last_name, key1], [first_name, last_name, key2]] instead """ author_zipped = list(zip([[author[0], auth...
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def hsv_to_rgb(h, s, v): """ Convert HSV to RGB (based on colorsys.py). Args: h (float): Hue 0 to 1. s (float): Saturation 0 to 1. v (float): Value 0 to 1 (Brightness). """ if s == 0.0: return v, v, v i = int(h * 6.0) f = (h * 6.0) - i p =...
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import shutil def teardown_tempdir(path_to_dir): """Removes directory even if not empty.""" shutil.rmtree(path_to_dir) return None
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def flatten(dict_in, delim="__", loc=[]): """Un-nests the dict by combining keys, e.g. {'a': {'b': 1}} -> {'a_b': 1}""" loc = loc or [] output = {} if not dict_in and loc: output[delim.join(loc)] = {} for key in dict_in: if isinstance(dict_in[key], dict): nest_out = flatt...
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def split_message(message, lines): """Given a message to display and the number of lines to display on, return a list of the substrings from the message to display for each line. Param: message(str) lines(int) Return: sublines(list): """ sublines = list() messag...
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import json def isolate_hit(JSON: bytes, URI: str) -> dict: """ Isolate the proper URI section from JSON bytes """ hit = json.loads(JSON) metadata = {} for item in hit.items(): if item[0] == URI: metadata = item[1] return metadata
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def check_number_edges(ugraph): """ dict -> int Just a sanity check to find the number of nodes on a undirected graph. """ directed_edges = 0 for node in ugraph: directed_edges += len(ugraph[node]) if directed_edges % 2 == 0: return directed_edges / 2 else: return "No...
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import os def find_all_files(directory_path, recursive): """ Finds all files in a directory. :param directory_path: :param recursive: if True looks in the subdirectories too :return: list with file paths """ all_files = [] for root, directories, files in os.walk(directory_path): ...
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import math def front_knee_acute(x, y, min_angle=100, side='right'): """ 10:"RKnee", 11:"RAnkle", 13:"LKnee", 14:"LAnkle" """ if side == 'right': degrees = math.degrees(math.atan2(y[14]-y[13], x[14]-x[13])) else: degrees = math.degrees(math.atan2(y[11]-y[10], x[11]-x[10...
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def loadHostDefaults(config): """ Load the defaults in "host" key of the configuration. """ if not config or not config.get("host") or not config["host"].get("url"): return [] urls = config["host"]["url"].split(",") return [{"key": "host", "src": url} for url in urls]
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def event_count(events): """Returns the total number of events in multiple events lists.""" return sum([len(e) for e in events])
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def run_sim_episode(sim, policy): """ Given a sim and a policy, step through some iterations of the simulator, returning the history of states. Args: sim: a PointSimulator policy: a function (SimState -> action dictionary) """ k = 0 # Count steps, break out of infinite loop...
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def format_memory_size(size): """ Returns formatted memory size. :param size: Size in bytes :type size: Number :returns: Formatted size string. :rtype: String """ if not size: return 'N/A GB' if size >= 1099511627776: sizestr = '%.1f TB' % (float(size) / 109951162777...
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def turn_into_list(object): """Returns a list containing the object passed. If a list is passed to this function, this function will not create a nested list, it will instead just return the list itself.""" if isinstance(object, list): return object else: return [object]
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def filter_by_control(df, threshold=0.6): """Find subjectNo where the CONTROL was rated greater than threshold.""" tmp1 = df[df['condition'] == 'CONTROL'].groupby(['subjectNo'])[ 'response'].min() > threshold tmp2 = tmp1[tmp1] print(f"N = {len(tmp2)}") return df[df['subjectNo'].isin(t...
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import os def get_file_in_directory(path): """ Retrieves file names from a directory \ \n\nInput: path = directory \ \n\nOutput: list of subdirectories """ # The last conditional here is in order to ignore the /DS_store file in macs return [os.path.join(path, name) for name in os.listdi...
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def mapSqr(L): """returns the map of sqr and L""" power = 2 lst = [] # have to make a new list so old is not mutated # cannot do better for x in L: #lst += [x ** power] # faster lst.append(x ** power) return lst
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def get_bounds_from_values(values): """Get list of bounds from given list of numeric values. :param values: List of numeric values :type values: list[int or float] :return: List of bounds :rtype: list[float] """ bounds = [] for i in range(len(values)): if i < len(values) - 1: ...
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async def is_document_exists(collection, id): """Determine if a document with a specific id exist in a collection or not""" return await collection.count_documents({'_id': id}, limit=1)
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import re def extract_rules(input_file): """Get rules out of an input Comprehensive Rules doc. At the moment this does intentionally leave some things off, most notably rule '808.' This is not a feature, it's a hack. Keyword arguments: input_file -- the CR file you want to strip rules from "...
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from typing import List def _solve_tridiagonal_matrix(a: List[float], b: List[float], c: List[float], r: List[float]) -> List[float]: """ Solves the linear equation system given by a tri-diagonal Matrix(a, b, c) . x = r. Matrix configuration:: [[b0, c0, 0, 0, ...], [a1, b1, c1, 0, ...], ...
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from re import VERBOSE def is_verbose(): """Encapsulate the module global for clean access from scripts that import this one. Returns: the value of the VERBOSE variable """ return VERBOSE
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def compare_surveys(surv1, surv2, alpha): """Event rate surv1 / Event rate surv2 for an alpha.""" omega = surv1.beam_size_fwhm/surv2.beam_size_fwhm T_rec = surv1.T_rec/surv2.T_rec gain = surv1.gain/surv2.gain beta = surv1.beta/surv2.beta SEFD = T_rec*beta/gain bw = surv1.bw/surv2.bw S_mi...
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from typing import List def permutar(arr: List[int]) -> List[List[int]]: """Devuelve todas las permutaciones del array. :param arr: Lista de enteros únicos. :arr type: List[int] :return: Lista de permutaciones. :rtype: List[List[int]] """ if len(arr) == 0: return [] if len...
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def print_menu(): """ Fonction qui permet à l'utilisateur de choisir une des options """ menu = """Que voulez vous faire? 1 - Ajouter un user à la liste 2 - Parcourir tous les users 3 - Récupérer un user via un ID q - quitter """ return input(menu)
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def smiles_in_training(smiles, data): """ Determines if a SMILES is a dataset. Parameters ---------- smiles : str SMILES string describing a compound. dataframe : pd.Pandas A pandas dataframe with a "smiles" column. Returns ------- bool : If the SMILES is in...
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def strFormatter(text: str) -> str: """Return a string by parsing and escaping latex reserved chars""" text = str(text) for x in range(len(text)): if x == 0 and text[x] == "&": text = "\\" + text elif text[x] == "&" and text[x - 1] != "\\": text = text[:x] + "\\" + ...
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def polygon2pathd(polyline_d): """converts the string from a polygon points-attribute to a string for a Path object d-attribute. Note: For a polygon made from n points, the resulting path will be composed of n lines (even if some of these lines have length zero).""" points = polyline_d.replace(',...
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def build_compound(compound): """Build a compound Args: compound(dict) Returns: compound_obj(dict) dict( # This must be the document_id for this variant variant = str, # required=True # This is the variant id display_name = str, # required combi...
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import os def check_exist(arg_filename): """" Helper function that checks if file exists and returns the result. :param: arg_filename :return: append_write """ if os.path.exists(arg_filename): append_write = "a" else: append_write = "w" return append_write
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def isiterable(iterable): """ https://stackoverflow.com/a/36407550/3356840 """ if isinstance(iterable, (str, bytes)): return False try: _ = iter(iterable) except TypeError: return False else: return True
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import requests import time def get_results_with_retry(wdt_sparql_url, query): """ Run SPARQL query multiple times until the results are there. """ while True: try: r = requests.get(wdt_sparql_url, params = {'format': 'json', 'query': query}) # res_t...
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def print_palindromes(palindrome_dict): """ Given a dictionary with palindrome positions as keys, and lengths as first element of the value, print the positions and lengths separated by a whitespace, one pair per line. """ for key, value in palindrome_dict.items(): print(key, value[0]) ...
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import math def trailingZeroes(self, n): # ! 这个解法太妙了 """ :type n: int :rtype: int """ zeroCnt = 0 while n > 0: n = math.floor(n/5) zeroCnt += n return zeroCnt
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def formatTuples(tuples): """ Renders a list of 2-tuples into a column-aligned string format. tuples (list of (any, any): The list of tuples to render. Returns: A new string ready for printing. """ if not tuples: return "" tuples = [(str(x), str(y)) for (x, y) in tuples] width...
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def normalized_thread_name(thread_name): """ Simplifies a long names of thread (for Zafira UI), e.g. MainThread -> MT, ThreadPoolExecutor -> TPE, etc. :param thread_name: thread name from Log Record object :return: simplified thread name """ normalized = '' for symb in thread_name: ...
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def _subexon_ranks(strand, transcript_len): """ Return a list of the subexon ranks. NOTE: Rank starts in 0 to make this compatible with end_phase_previous_exon that expect exon_pos(ition) to start in 0. >>> _subexon_ranks(-1, 10) [9, 8, 7, 6, 5, 4, 3, 2, 1, 0] >>> _subexon_ranks(1, 10) ...
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def check_not_mnist_files(path): """Filters some bad files in NotMNIST dataset.""" bad_paths = [ "RGVtb2NyYXRpY2FCb2xkT2xkc3R5bGUgQm9sZC50dGY=.png", "Q3Jvc3NvdmVyIEJvbGRPYmxpcXVlLnR0Zg==.png", ] for bad_path in bad_paths: if bad_path in path: return False return T...
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def best_alignment(seq1, seq2, S, P): """ The function aligns seq1 to seq2 using P matrix. The score will be extracted from the matrix S, which stores all the maxima of the alignment. "best_alignment" returns the template (seq1), target (seq2) including eventual gaps in the two AND best score""" i = l...
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import platform def get_OS(): """ Returns the operating system. """ if "Windows" in platform.platform(): return "Windows" elif "macOS" in platform.platform(): return "Mac" else: return "Linux"
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def get_diff_dict(d1, d2): """ return common dictionary of d1 and d2 """ diff_keys = set(d2.keys()).difference(set(d1.keys())) ret = {} for d in diff_keys: ret[d] = d2[d] return ret
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from typing import Dict from typing import List from typing import Tuple from typing import Optional def deconstruct_entry(entry: Dict[str, str], username_fields: List[str], sightings_fields: List[str]) -> Tuple[Optional[str], ...
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def get_computername(): """ Returns a Computer name from text file which is then iterated over in powershell() """ with open (r'f:\Windows_10_Refresh\Powershell\NoBOM.txt', 'r') as f: x = f.read().splitlines() return x
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def _vrtWrapBand(vrtDataset, sourceBand): """ Wraps a GDAL raster band in a VRT band. """ # Retrieve the width and height from the source band width = sourceBand.XSize height = sourceBand.YSize # Create the new VRT raster band vrtDataset.AddBand(sourceBand.DataType) vrtBand = vrtDataset.GetRasterBand(vrtDa...
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def utcstr(ts): """ Format UTC timestamp in ISO 8601 format. :param ts: The timestamp to format. :type ts: instance of :py:class:`datetime.datetime` :returns: Timestamp formatted in ISO 8601 format. :rtype: unicode """ if ts: return ts.strftime("%Y-%m-%dT%H:%M:%S.%f")[:-3] + "Z...
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import sqlite3 def conectionDB(func): """This is a decorator to open and close the database""" def wrapper(*args, **kwargs): global myConection global myCursor myConection = sqlite3.connect("PasswordsDB") myCursor = myConection.cursor() result = func(*args, **kwargs) ...
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from datetime import datetime def current_year(): """ Return current year. """ now = datetime.now() return now.strftime('%Y')
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def get_strikes(df, strike, dte): """Get strike closest to underlying price""" # Sort df by DTE df = df[(df['daysToExpiration'] <= dte)] #Sort df by strike df =df.iloc[(df['strikePrice'] - strike).abs().argsort()[:1]] df.reset_index(drop=True, inplace=True) strike_price = df['strikePrice'][0...
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import requests def init_session(refresh_token, base_search_url): """Helper method to create a requests Session""" post_body = {"refresh_token": refresh_token} response = requests.post( "{}/tokens/".format(base_search_url), json=post_body) response.raise_for_status() token = response.json(...
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import os def file_exists(file_name): """ Check if file or folder exists :param file_name: Path of the file :return: True/False """ return os.path.exists(file_name)
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import inspect def _get_args_from_config(from_config_func, *args, **kwargs): """ Use `from_config` to obtain explicit arguments. Returns: dict: arguments to be used for cls.__init__ """ signature = inspect.signature(from_config_func) if list(signature.parameters.keys())[0] != "cfg": ...
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def my_vocab(x_tokens): """Create vocabulary""" vocab = dict() vocab['unk'] = 0 # token desconhecido cont=1 for tokens in x_tokens: for t in tokens: if vocab.get(t) == None: vocab[t] = cont cont+=1 return vocab
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import argparse from pathlib import Path def handle_args(): """ :return: """ parser = argparse.ArgumentParser() parser.add_argument( "-o", "--object-model", help="The path to the object model file", ) parser.add_argument( "--vendor", help="The vend...
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import json def load_dict(x, transformer=None): """ convert to dict :param x: :return: """ if x is None or isinstance(x, dict): return x try: data = json.loads(x) if not transformer: transformer = lambda x: x data = {k: transformer(v) for k, v i...
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import os def index_file_path(base_dir, index_name, date_string): """ Create path to index file. The arg date_string can be in one of two forms: yyyymmdd or yyyymmdd.hh. """ ifp = os.path.join(base_dir, "%s.%s" % (index_name, date_string)) return ifp
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import argparse def get_args(): """ desc: get cli arguments returns: args: dictionary of cli arguments """ parser = argparse.ArgumentParser(description="this script creates tf record files", formatter_class=argparse.ArgumentDefaultsHelpFormatter) parser.add_argument...
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def getkey(pstring): """Strips units and argument lists from a property/trajectory keyword. Args: pstring: The string input by the user that specifies an output, which in general will specify units and argument lists. Returns: A string giving the keyword for the property, stripped of the ...
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from pathlib import Path import hashlib def get_hash(path: Path) -> str: """Get the SHA256 hash digest of a file.""" m = hashlib.sha256() m.update(path.read_bytes()) return m.hexdigest()
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import re def is_line_function_definition(line: str) -> bool: """Returns true if the corresponding line (of a python file) is the start of a function definition. Excludes functions that start with `__` which indicates a private function. Args: line: a line in a python file """ return boo...
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def sum_BinTNode(t): """ 二叉树节点求和 """ if t is None: return 0 else: return t.data + sum_BinTNode(t.left) + sum_BinTNode(t.right)
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def salt_cloud_cli(salt_master_factory): """ The ``salt-cloud`` CLI as a fixture against the running master """ return salt_master_factory.salt_cloud_cli()
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def retrieve_search_terms(): """Open a text file. Store each line in a set. Return the set.""" with open('search_terms.txt', 'r') as infile: search_terms = {line.strip().lower() for line in infile} return search_terms
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def logged_in_user(testapp, user): """Pytest fixture to produce a user that is correctly logged in.""" res = testapp.get('/login') # Fills out login form in navbar form = res.forms['login_user_form'] form['email'] = user.email form['password'] = 'myprecious' # Submits res = form.submit()...
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def get_answers_for_question(current_user, question): """ Get the answers for a given question :param question: neomodel room with answers :return answers[]: array of answers """ answers_array = [] answers = question.answers for a in answers: answer = a.json() if(a.user...
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def get_tool_dependency(app, id): """Get a tool_dependency from the database via id""" return app.install_model.context.query(app.install_model.ToolDependency).get(app.security.decode_id(id))
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def is_numpy(value): """ Determines whether the specified value is a NumPy value, i.e. an numpy.ndarray or a NumPy scalar, etc. Parameters: ----------- value: The value for which is to be determined if it is a NumPy value or not. Returns: -------- boolean: Returns T...
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from datetime import datetime def parse_time(argument): """ Time parser to be used as type argument for argparser options. """ return datetime.strptime(argument, "%H:%M")
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def open_tdump(filename): """Opens the tdump file Parameters ---------------- filename: string Full file path for tdump file Returns ----------- tdump: _io.TextIOWrapper tdump file opened in read mode, encoding UTF-8 ready to be used by other functions in this co...
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def methods_equivalent(meth1, meth2): """Return True if the two methods are the same implementation.""" return getattr(meth1, '__func__', meth1) is getattr(meth2, '__func__', meth2)
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import os import shutil def which_executable(environment_variable, executable_name): """ Determine the path of an executable. An environment variable can be used to override the location instead of relying on searching the PATH. :param str environment_variable: The name of the environment variable...
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def in_region(val, x_ranges, lines, eps=1e-14) -> bool: """ checks if val is in region with boundary determined by x_ranges, lines x_ranges and lines are returned from pm_boundary(n) """ for i in range(len(x_ranges)): x1, x2 = x_ranges[i] if val.real >= x1-eps and val...
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from functools import reduce def union(sets): """ Returns the union of multiple sets. """ return reduce(lambda x, y: x | y, sets)
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def get_task_no(job_id): """Extract the task number from the full job/job step ID""" task_info = job_id.split('_')[1] task_no = task_info.split('.')[0] if '.batch' in task_info else task_info return int(task_no)
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import os def process_args(args): """ Process the options got from get_args() """ if not os.path.exists(args.input_file): raise Exception("This scripts expects input scores file [ {0} ] exist.".format(args.input_file)) if not os.path.exists(args.trials_file): raise Exception("This scr...
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