content
stringlengths
35
416k
sha1
stringlengths
40
40
id
int64
0
710k
def get_language(file_path): """Return the language a file is written in.""" if file_path.endswith(".py"): return "python3" elif file_path.endswith(".js"): return "node" elif file_path.endswith(".rb"): return "ruby" elif file_path.endswith(".go"): return "go run" elif file_path.endswith(".c") or file_...
2f34390227932c7add58967dbe9bfc3834526b8e
685,639
def make_iter_method(method_name, *model_names): """Make a page-concatenating iterator method from a find method :param method_name: The name of the find method to decorate :param model_names: The names of the possible models as they appear in the JSON response. The first found is used. """ def ite...
67623ab63930a899a1e6ce91c80e49ec41779079
685,640
def get_vector11(): """ Return the vector with ID 11. """ return [ 0.6194425, 0.5000000, 0.3805575, ]
f45a1e4f7351c9455e67e98cbe6a40f15aee3440
685,641
def getGalaxyData(hd_gal, galaxy_SMHMR_mass, redshift_limit): """ Function to get relavant data for galaxies """ if isinstance(galaxy_SMHMR_mass, (int, float)): downsample_gal = (hd_gal['galaxy_SMHMR_mass']>galaxy_SMHMR_mass) & (hd_gal['redshift_R']<redshift_limit) else: downsam...
54eca309c270905e45bdf9de5553c73cf66e99be
685,642
def parr_to_pdict(arr, measures_optimized): """Convert BO parameter tensor to parameter dict""" if measures_optimized: d = { 'p_stay_home': arr[0].tolist(), } return d else: d = { 'betas': { 'education': arr[0].tolist(), ...
50623f2aae87a5326b4524f249bf28eb093aa7c0
685,643
def trapply_calib(trin): """Apply calibration values to data-points in a trace object""" return trin.apply_calib()
cf19889be308fa8ad86a4a822202aa76185357e6
685,644
def make_my_controller_match(): """Function to generate an ACL match for access to controllers specific to this device Returns: dict: A dictionary representing the my-controller match. """ return {'my-controller': []}
27a76362b5a9abda456db71b423ea8152d798430
685,645
def all_names(command): """Return a list of all possible names in a command""" return [command.name, *command.aliases]
53460c0b93adf0c9ea80a67a2362c841e90da258
685,646
import string def get_printable(text): """ Return string if printable, else None """ try: if all(c in string.printable for c in text): return text except TypeError: if all(chr(c) in string.printable for c in text): return text return None
e6b14e2c59b1d90dfcfbdda82298c6a4624aee6c
685,647
import array import math def get_entropy(data): """ learn Entropy calculated across various sections & resources """ if len(data) == 0: return 0.0 occurences = array.array('L', [0]*256) for x in data: occurences[x if isinstance(x, int) else ord(x)] += 1 entropy = 0 for x in occurences: if x: p_x = ...
e99f584a43291a6c6fa5c7bbc5adb3a6f0c453e6
685,648
import time def is_noncomplex(obj): """Returns True if *obj* is a special (weird) class, that is complex than primitive data types, but is not a full object. Including: * :class:`~time.struct_time` """ if type(obj) is time.struct_time: return True return False
c5066e98af5556d331b64ff997d124f4e8110983
685,649
def split_index(index, n=8): """Split a conversions index, which is a list of tuples (file position, number of lines, alignment position), one for each read, into `n` approximately equal parts. This function is used to split the conversions CSV for multiprocessing. :param index: index :type ind...
61e783c1fe15fc12727f3fca4059735f6d7f78da
685,650
from typing import Counter import pickle def build_dict(examples, filepath, max_words=50000): """ Build a dictionary for the words in `sentences` and a dictionary for the entities. Only the max_words ones are kept and the remaining will be mapped to <UNK>. """ documents, questions, answers...
c9fd84f7c574249c6e9d250cd403de68594aa41e
685,651
def get_value(input: int) -> str: """Given an int it return Fizz, Buzz or FizzBuzz if it is a multiple of 3, 5 or both""" if input % 15 == 0: return "FizzBuzz" elif input % 3 == 0: return "Fizz" elif input % 5 == 0: return "Buzz" else: return f"{input}"
4121f16d70f3890e986ffee5a7e677e580f28120
685,652
import collections import json def diff_between_policies(old_policy, new_policy): """Returns the difference between two policies. Args: old_policy: Old policy new_policy: New policy """ old_bindings = collections.defaultdict(set) for b in old_policy["bindings"]: if "condition" in b: ...
ec07a89e777b1b913afc0d2a8ba9c89529aa0d65
685,653
from datetime import datetime import os def iaga_fname(path, stn, date, cutoff_date=datetime(2007, 1, 1)): """ """ if date >= cutoff_date.date(): ext = 'dmin.min' else: ext = 'd.min' return os.path.join(path, '{stn}{date:%Y%m%d}{ext}'.format(stn=stn.lower(), ...
b355d805a196ae41aab1def08c5f6dad4059a05d
685,655
import os def scoop(source, target, offset, size): """ copy a specified portion of a binary file """ truncated = False try: source_size = os.path.getsize(source) except FileNotFoundError: return 1, f'Invalid source: {source}' if offset > source_size: return 1, f"offset: {...
a3d9225195d5e16688666951426aed02508c6bbb
685,656
import copy def get_topic_with_children(prefix, children): """ Reuse the three-nodes sequence form sample_children to create a topic node. Modify `node_id`s and `content_id`s to make sure nodes are different. """ topic = { "title": "Topic " + prefix, "node_id": prefix, "con...
a6797e400d044f82700d0b4c25ca0886cde441a2
685,657
def camel_case_to_readable(text): """ 'camelCase' -> 'Camel Case' """ if text == 'id': return 'ID' return ''.join(' ' + char if char.isupper() else char.strip() for char in text).strip().title()
f80b3fae61d9553bcdbee0930cc3b17168fd1b23
685,659
def check_box(grid, supp): """ search box for unusable numbers and delete them""" box_num = [] for x in range(9): for y in range(9): if grid[x][y] != 0: box_num.append(grid[x][y]) for z in box_num: for a in range(9): supp[x][a][z] = 0 ...
1255ee80e767b8a19087b4d9a824aa8c0c944416
685,660
def split_smiles(smiles: str) -> list: """Splits a SMILES string into individual tokens. This will split a SMILES string into tokens representing individual parts of the SMILES string. Each individual token will be one of the following, - A single atom (including hydrogens or charge if specified) ...
a9e82d19375502a62155d952f230c583c50c059c
685,661
def main(*, data_1, data_2): """entrypoint function for this component""" # ***** DO NOT EDIT LINES ABOVE ***** # write your function code here. common_index = data_1.index.intersection(data_2.index) return { "data_1_restricted": data_1.loc[common_index], "data_2_restricted": data_...
591dbabb178eaae46b3486ae3e00db115a7f29db
685,663
def chi2fn_2outcome_wfreqs(N, p, f): """ Computes chi^2 for a 2-outcome measurement using frequency-weighting. The chi-squared function for a 2-outcome measurement using the observed frequency in the statistical weight. Parameters ---------- N : float or numpy array Number of sampl...
a9975542d26aa17f08e57730b4ad71c9e1dbb020
685,664
def get_wikidata_id(wikidata_uri): """ Returns Wikidata ID (e.g. "Q92212") given Wikidata entity URI, or None. """ wikidata_base_uri = "http://www.wikidata.org/entity/" if wikidata_uri.startswith(wikidata_base_uri): wikidata_id = wikidata_uri[len(wikidata_base_uri):] else: wikida...
9b505dfb65a48ae4ca515483733f3f732aa88aac
685,665
def get_feature_code(properties, yearsuffix): """ Get code from GeoJSON feature """ code = None if 'code' in properties: code = properties['code'] elif ('lau1' + yearsuffix + 'cd') in properties: code = properties['lau1' + yearsuffix + 'cd'] return code
1c068245e2551a2b35824c526a7b491538b387f0
685,666
def is_tank_asset(filepath, tk): """ Args: filepath: tk: Returns: """ templ = tk.template_from_path(filepath) return True if templ else False
2a398ee66d2e9b70ef36e400ac569cd89c003bc6
685,667
def strid_to_opts(strid): """ Given model id as string, extract parameter dictionary. Reverse of config_loader.opts2strid :param strid: :return: """ raise NotImplementedError #Method not finished parts = strid.split("_") param_keys=",".split("thr,win,dim,neg,dim,size,eig,neg,d...
643394fb7d0964942611be1eb07e2fabf15aab5d
685,668
def convert_type(type_string): """Coverts the typing version of the type to the basic python type (list or dict) :param type_string: :type type_string: str :return: type """ if type_string.startswith('List'): return list elif type_string.startswith('Dict'): return di...
e3c68cbf4fd1bae5ac9f438ab16b0b56a9b09eca
685,669
def is_draw(state): """Returns True if no boxes are empty but nobody has won. If not returns False.""" for i in state: for s in i: if s == 0: return False return True
c34d0e04217069decc2af5189214a689e9770039
685,670
def key_check(line,keyword): """ For ARGS, checks if a line of the input file has a keyword on it """ if keyword in line: return True ...
9d0698d84648bab263b2b676ad2ef9838dce89bd
685,671
def leiaInt(txt): """ Aceitando apenas que o usuário adicione um valor inteiro, caso não seja inserido um valor inteiro, é soliciado novamente que o Usuário digite um número que não está na lista o menu é recarregado adicione um valor inteiro. :param txt: Texto a ser exibido solicitando os dados do Usuá...
ea01b79b7e11ab1e7b4bcbc91341af8ef1f07199
685,672
def validate_vector(obj, throwerr=False): """ Given an object obj, check if it is a valid raw representation of a real mathematical vector. An accepted object would: 1. be a Python list or Python tuple 2. be 2 or 3 items in length :param obj: Test subject :param throwerr: Raise an e...
dc223fe1541458d5b77d4cbf71284a06365cc2b5
685,673
def worldtidesinfo_unique_id(lat, long): """give a unique id for sensor""" return "lat:{}_long:{}".format(lat, long)
771ec01eb4bc45bdbfbf3ca58e09cf78889842d2
685,674
import math def dist(x1, y1, x2, y2): """ Returns the euclidean distance. Keyword arguments: >>> x1: float value for X for first point (ft.) >>> y1: float value for Y for first point (ft.) >>> x2: float value for X for 2nd point (ft.) >>> y2: float value for Y for 2nd point (ft.) RETU...
4e72efce9d04338f3729bfc4f854c795ca0aa44a
685,675
def standardize_static(X_lst): """ Standardize static features """ mean = X_lst[-1].mean(0) std = X_lst[-1].std(0) std[std == 0] = 1 X_lst[-1] = (X_lst[-1] - mean)/std return(X_lst)
24f7eb045fbeb33e8b35cde3f2100e9c38727a94
685,676
def handle_index(headers, resources={}): """Create an index of the subsections (with max depth of 2)""" top_section = "" index = [] last_level = -1 for id, level, title in headers: if level > 3: continue if not top_section: top_section = id elif level...
90afb1b6423c55a5d5b77955f450b4aab49abede
685,677
import io import os def get_filetext(rootdir, filename): """ Get the text of a local file """ with io.open(os.path.join(rootdir, filename), encoding='utf-8') as f: return f.read()
82f85d6ed7f9c7964d920e90d8d71db56c3e3e03
685,678
import inspect def bokeh_no_input_update_function(update_function, doc): """return a function that adds a callback to the bokeh server queue.""" if inspect.iscoroutinefunction(update_function): return lambda data: doc.add_next_tick_callback(update_function) else: async def async_update_fun...
3ffc644e1d0be17c2881127678b703c6528c85d3
685,679
from typing import Callable import inspect def get_function_name(function: Callable) -> str: """Get the proper name of a function as string Parameters ---------- function : Callable function to get the name from Returns ------- name : str """ name = function.__module__ + ...
cd07a328dacf96de51738230b98f5db7f8ca2f7a
685,680
def check_member_in_project(project, user): """ Check user whether or not in project. """ if user.is_staff: return True if user in project.members.all(): return True return False
2c55b3980bf84a2302f8ce64d938c332248d5540
685,681
def factor_n(n): """ Converts input n to the form 2^exp * mult + 1, where mult is the greatest odd divisor of n - 1, and returns mult and exp. """ assert n >= 3 and n % 2 != 0, "n must be an odd integer > 2" mult = n - 1 exp = 0 while mult % 2 == 0: mult //= 2 exp += ...
ff5ef9da757934dfe98eff62a1614a4d9567b777
685,682
def get_sym(pair): """ reformats a tuple of (team, rival) so that the first element is smaller than the other (by convention, this is how we represent a match without home-away status). """ if pair[0] > pair[1]: return pair[1], pair[0] else: return pair
7ab7edbfe2aebf3c76bf7182511a3a4896130278
685,683
def is_outgoing(reaction, scc): """ bool: the reaction leads out of the passed scc. """ return not (set(reaction.products) <= scc)
544ad3929597a783360161d9067d7c9fb92b5c56
685,684
def is_afs_path(path): """R """ if path.startswith("afs") or path.startswith("hdfs"): return True return False
e5129b085b90cd39b6aff19093d88d71bc0d05db
685,685
def fromPoint3d( pt ): """Converts a Point3d to a tuple""" if pt is None: return None return (pt.x, pt.y, pt.z)
834a73fb04c0d66932dc4897f7083ff88efc3dfd
685,686
def is_valid_patch(xs,ys,patch_size,purple_mask,intensity_threshold,threshold=0.5): """Deprecated, computes whether patch is valid.""" print(xs,ys) return (purple_mask[xs:xs+patch_size,ys:ys+patch_size]>=intensity_threshold).mean() > threshold
bfd3e26f336b9cdf71dd9fb861569c5832dde51b
685,687
def get_rpkm_mean_filter(kl, min_rpkm_mean): """ Mask kl to filter on the estimated means. """ m_min_rpkm_mean_1 = kl['mean_1'] > min_rpkm_mean m_min_rpkm_mean_2 = kl['mean_2'] > min_rpkm_mean m_min_rpkm_mean = m_min_rpkm_mean_1 & m_min_rpkm_mean_2 return m_min_rpkm_mean
60e0ddc8f3205a5bb480ed3739cb6a1796748508
685,688
from datetime import datetime def replace_date_format(date_string): """ Return date in format without the year """ date = datetime.strptime(date_string, '%d.%m. | %H:%M') return date
ed0e597015ef49231ce2681a0a8e44910c188484
685,689
import os def eval_dp(filename, outfile, threads, points_file, model_name='ghhc', dataset_name='dataset'): """Evaluate dendrogram purity with shell script using xcluster DP code.""" os.system("sh bin/score_tree.sh {} {} {} {} {} > {}" .format(filename, model_name, dataset_name, threads, points_...
29837fa89d5a378c98b50757f57d2a31094ad759
685,691
import os as _os import bz2 as _bz2 import tempfile as _tempfile def compress(inputfile=None, outputfile=None, inputdata=None, compression_type="bz2"): """Compress either the passed filename or filedata using the specified compression type. This will compress either to the file called 'outputfile', or to ...
c030145a61e53de6d9720abc677fb596cc9a1643
685,692
import threading def threadsafe_function(fcn): """decorator making sure that the decorated function is thread safe""" lock = threading.RLock() def new(*args, **kwargs): """Lock and call the decorated function Unless kwargs['threadsafe'] == False """ threadsafe = kwargs...
07ce73d55caed45cefe72bf9c7ace6d6de71d60e
685,693
import argparse def init_argparse() -> argparse.ArgumentParser: """Initialize an arguments parser, to parse the command line's arguments Returns ------- argparse.ArgumentParser arguments parser to be used to process command line arguments """ parser = argparse.ArgumentParser( ...
4147736d3fd8b8b95cf58a86a0a282f63d6d8d43
685,694
def acidity (NaOH_volume, NaOH_molarity, NaOH_fc, honey_solution_concentration, honey_solution_volume): """ Function to get acidity in honey - meq/kg """ mili_eq_NaOH = NaOH_volume * NaOH_molarity * NaOH_fc grams_of_honey = (honey_solution_concentration * honey_solution_volume) / 100 acidity = (...
d8854838939569a8f74db33cec73c46d9f487200
685,695
import torch def linear_to_exact_solve_shape(self, x, z_updated, W, b): """ Suitable reshape for the exact solve method. """ Z = torch.cat((W.t(),torch.unsqueeze(b,0).type_as(W)),0) A = torch.cat((x, torch.ones(x.size(0),1).type_as(x)),1) return A, z_updated, Z
0fba7e6410aee90f92cb54c3585913f5b29282fc
685,696
import os def expand_restart_files(basename): """Returns expanded restart files based on basename""" top = os.path.abspath(basename + '.top') crds = os.path.abspath(basename + '.gro') vels = '' # dummy file for cross-package interface return top, crds, vels
7759f6f06e8721ba69e3c92bdd63287e55a941df
685,697
def construct_graph_from_nodes(parent_g, nodes, outputs, shapes, dtypes): """Construct Graph from nodes and outputs with specified shapes and dtypes.""" # pylint: disable=protected-access g = parent_g.create_new_graph_with_same_config() g.parent_graph = parent_g nodes = set(nodes) all_outputs = ...
e44b11ff78a648fd9825f5466c836aaa1121c1eb
685,698
import io import re def extract_urls(fname, encoding="utf8"): """ extract URLs from a file and return the result in a list """ with io.open(fname, "rt", encoding=encoding) as f: return re.findall('http[s]?://(?:[a-zA-Z]|[0-9]|[$-_@.&+]|[!*\(\),]|(?:%[0-9a-fA-F][0-9a-fA-F]))+', f.read())
90ad4f9e184e0a57034e9b0b7421989ec29e5e9e
685,699
def parse_node_coverage(line): # S s34 CGTGACT LN:i:7 SN:Z:1 SO:i:122101 SR:i:0 dc:f:0 # "nodeid","nodelen","chromo","pos","rrank",assemb """ Parse the gaf alignment Input: line from gaf alignment Output: tuple of nodeid, nodelen, start_chromo, start_pos, coverage """ l...
b8d2c5eaad33fdee0e9f004982ec9a27f2a40726
685,700
def atr_apply_nb(high_ts, low_ts, close_ts, window, ewm, adjust, tr, cache_dict): """Apply function for `vectorbt.indicators.basic.ATR`.""" h = hash((window, ewm)) return tr, cache_dict[h]
5dfe393f0251d206c95131ebaad617947c362cb5
685,701
def fft_parameters(fft_para,source_params,locs,component,Nfft,data_t): """ Creates parameter dict for cross-correlations and header info to ASDF. :type fft_para: python dictionary. :param fft_para: useful parameters used for fft :type source_params: `~np.ndarray` :param source_params: max_mad,...
6452c117d68316aaf27c535d165c10e428eab51f
685,702
import re def apply_formatting(locator, args): """Apply formatting to the locator If there are no named fields in the locator this is just a simple call to .format. However, some locators have named fields, and we don't support named arguments to keep the syntax simple, so we need to map position...
795912b5378819fe2dc4d2bb9c4f59b33e4efd2f
685,703
def direction_name(angle): """ Returns a name for a direction given in degrees. Example: direction_name(0.0) returns "N" direction_name(90.0) returns "E" direction_name(152.0) returns "SSE". """ direction_names = ["N", "NNE", "NE", "ENE", "E", "ESE", "SE", "SSE", "S", ...
419a4d3fec9e977c84fad84bd6d09441f66e9ca9
685,704
def figure_to_html(figure, prefix=None, max_in_a_row=None, true_break_between_rows=False): """ Turns filepaths to nice html-figures Parameters ---------- figure: Union[List[str], str] path or list of paths prefix: Union[None, str] if set, the length of this string will be clipped fr...
e939541455edac60cda1e680f1b74d3eddbb4265
685,706
def make_query(specific_table, offset): """ Generate a query to retrieve data from database. :param specific_table: Name of table to retrieve data from. :param offset: Optional offset to start from. """ query = 'select DISTINCT * from `{}`'.format(specific_table) if isinstance(offset, int):...
e039ecb8fe340c51a80bc919bf368f0b4ceda508
685,707
def notification( alert=None, ios=None, android=None, amazon=None, web=None, wns=None, actions=None, interactive=None, in_app=None, open_platform=None, sms=None, email=None, ): """Create a notification payload. :keyword alert: A simple text alert, applicable for ...
1de5ece1569001cdefdffba8967bcfc7d1cee35c
685,708
import random def mutation(ind, fr_mut = 0.1): """ С заданной вероятностью изменяет случайный символ в последовательности из 1 и 0 на противоположенный. При подаче пустой последовательности выдаёт 00 """ if random.random() < fr_mut: if ind == '': return '00' else: ...
fee41c069addeb2a29299e3362d945e04f255d8a
685,710
from typing import List import random def generate_artificial_reads( genome: str, number_of_reads: int, read_length: int ) -> List[str]: """Generate a set of reads randomly from a genome""" reads = [] for _ in range(number_of_reads): start_position = random.randint(0, len(genome) - read_length...
30ff2b25c141a548a4f8c1945725e3941f27ef6e
685,711
import random def start_food(): """Creates random starting food from 5-10.""" food = random.randint(5,10) return food
a44194ab1090d11c2c481e85d03e5cdb6adb335c
685,712
def get_api_url(for_repository): """ Get the api url for GET request to obtain tags :param for_repository: :return: """ api_url = 'https://api.github.com/repos/{}/git/refs/tags'.format(for_repository) return api_url
00769ba24bf2af38c87d3c989463ee40b9bdb6be
685,713
import platform import os import subprocess def user_home(user): """ Return user home path for all kind of users """ if platform.system().lower() == 'windows': return os.getenv('HOME') else: return subprocess.check_output('echo ~' + user, shell=True).strip().decode('utf')
fbc339c4d404da82fdce4d60d54806f30ed712be
685,714
def is_builtin_reducer(fn_reducer): """ Returns True if fn_reducer specifies the built-in reducer. """ return (fn_reducer == 'aggregate')
0133273062d1661a7e60be1c11eb336825008ce6
685,715
def format_code(entry): """ Formats the viewing of code and errors """ code = "" for line in entry.split('\n'): code += "\n|G>>>|n %s" % line return code.strip()
dfcc4482493333a91e0877a30dd04adc10edd00e
685,716
def addmixconstraints256(model, config, var_x, current_round): """ Adds the mix layer. Note that this layer is only defined if there are exactly two AES states. """ assert(config["aesstates"] == 2) # Columnwise permutation permutation = [0, 4, 1, 5, 2, 6, 3, 7] state...
a2d203179bfddcccb3484862f4d71a6892132f6e
685,717
def reverse_list(head): """ :type head: Node :rtype: Node """ if not head and not head._next: return head prev = None while head: current = head head = head._next current._next = prev prev = current return prev
02e4aa372199cc8ce8b5be479abc4d934430d6bb
685,718
from typing import Union def _is_dict(data: Union[dict, list]) -> bool: """ Checks whether provided data structure is a dictionary or not. :param data: The data to check :return: true if is dict, false otherwise """ if isinstance(data, dict): return True return False
77ff0ac36c85700e0b9a32172ccd8f426419c848
685,719
def flatten(data): """Returns a flattened version of a list. Courtesy of https://stackoverflow.com/a/12472564 Args: data (`tuple` or `list`): Input data Returns: `list` """ if not data: return data if type(data[0]) in (list, tuple): return list(flatten(dat...
f105493b23bdd08560e5a6a60bb59966a462f69a
685,720
from typing import List from typing import FrozenSet def minimize_cutsets(cutsets: List[FrozenSet]): """ Inefficient method used for testing. Assumes all in cutsets are valid but some are not minimal.""" cutsets.sort(key=lambda c: len(c)) results = set() for c in cutsets: minimal = True ...
fdb5e8447ac5fbe7c629c5ff1cba7013e7291a52
685,721
def detect_cycle(variable, substitutions): """check whether variable has been substituted before""" # cycle detection if not isinstance(variable, list) and variable in substitutions: return True elif tuple(variable) in substitutions: return True else: has_cycle = False ...
1ae00b9ea6ad85905bde4541908d807a4c92a3f0
685,723
def operation(scaled_embeddings, approach, dim = -1): """ defines the operation over the scaled embedding """ assert approach in ["sum-over", "max-pool", "mean-pool"] if approach == "sum-over": return scaled_embeddings.sum(dim) elif approach == "max-pool": ...
cb675d6fbbd5346e855cca8e46c3a71ffd5ecf49
685,724
def clip(min, val, max): """ Returns `val` clipped to `min` and `max`. """ return min if val < min else max if val > max else val
b80e8e79e6ae8e0eea25e221c3bee13097da240c
685,725
def solution(): """ The prime factors of 13195 are 5, 7, 13 and 29. What is the largest prime factor of the number 600851475143 ? """ i, n = 2, 600851475143 while i * i <= n: if n % i: i += 1 else: n //= i return n
f024dc931293c8b4d9afdc468e39c5a3ebcfcce8
685,729
def unique(lst): """ Returns a list made up of the unique values found in lst. i.e., it removes the redundant values in lst. """ lst = lst[:] unique_lst = [] # Cycle through the list and add each value to the unique list only once. for item in lst: if unique_lst.count(item) <= ...
ea7da0316b397147b1f32f59e8bca14a2d861b47
685,730
def h_f(v): """"humanize float""" return "{:.1f}".format(v)
d8a7796330ed1e271697c92a8e6a6332b557f2e4
685,731
def reorder_commontracks_by_tag_connections(reconstruction, common_tracks, tag_graph): """Sort by number of connected tags to current reconstruction, then by number of common tracks""" # triplet that include number of tag connections common_tracks_with_tags = [] # iterate through tracks, for each i...
7a5dbd29413192676628bdd81fa423d8119f1bc2
685,732
import numpy import time import copy def mutation(offspring_crossover): """ :param offspring_crossover: the population :return: the new population with a gene of each individual mutated """ numpy.random.seed(seed=int(time.time())) # define chromosomes limits limits = [[-0.0008, 0.0008], [...
89a9c9cdd7dfadb14e302cd02d5090a5566cf658
685,733
def _from_data_nist(data_raw): """Convert a NIST data format to an internal format.""" for point in data_raw: point.pop('species_data') return data_raw
53160b26106587e2cfb2bd4a9cfd5201ed507418
685,734
def fetch(pars, fun): """ Fetch a parameter from a parameter set, computing it first if necessary. """ if not pars._has(fun.__name__): fun(pars) return pars._.__getattribute__(fun.__name__)
8c8b16d083bb40d9a7200adb52dd5fc06593a75b
685,735
from typing import List def linear_search(arr: List[int], target: int) -> int: """ :param arr: Array of integers (may be sorted or unsorted) :param target: integer we want to find :return: position of the target in the array, -1 if not found """ for i in range(0, len(arr)): if arr[i] =...
f6019243aa777d541ff1c1dfeccae6ba90b30590
685,736
import yaml def load_local_paths(path): """ Load local paths .yaml file. Parameters ========== path : str Path to .env file. Returns ======= local_paths : dict Dictionary with environmental variables from .yaml file. """ with open(path, 'r') as f: try...
07923813202526eb1ecad4b636565458a6ed140c
685,737
from pathlib import Path import inspect import sys def _get_function_signature(func): """ Get a unique signature for each function. """ try: # NOTE: Unwrap function decorators because they add indirection to the actual function # filename. while hasattr(func, '__wrapped__'): ...
9a9b0b2ea3439b4908369cd33ed969ac899132e2
685,738
def mass_from_column_name(mass): """Return the PVMassSpec mass 'M<x>' given the column name '<x>_amu' as string""" return f"M{mass[:-4]}"
dc769442c3c276282f7e1ae76585677ef0b5bc10
685,739
def extract_content_text(xml_root): """ Returns all sections under a p node. After each identified p section, adds a string interpretation of a paragraph break, i.e. two line-breaks. :param xml_root: root of xml parse :return: the content as a string """ xml_par_text = '' for par in xml_...
61b0fe4ba9a4748a0d0888569c4b4a58bbd0cf2c
685,741
def gram_align_right(s, line_width: int = 20): """ Format for telegram, align right. :param s: input text :param int line_width: Width :return: str """ return '`{}`'.format(str(s).rjust(line_width))
5b317c7145d9736dff5c7df167603f018d446f47
685,742
def recurse_fib(n): """ F(n) = F(n - 1) + F(n - 2) """ if n < 2: return n else: return recurse_fib(n - 1) + recurse_fib(n - 2)
03e45b71e14d711e776233d39355f73e7b60c308
685,743
import torch from typing import Tuple def get_idxs_tuple(idxs: torch.Tensor ) -> Tuple[torch.Tensor, ...]: """ @param idxs - Shape (num indices, num dimensions that the indices index into). @returns - A tuple, which can be directly used to index into a tensor, eg tensor[idxs_tuple]. ...
b61318711c11d516295081276c11e0236a7c9520
685,744
def process_local_results(results, sensitive_species, number=10): """ Return a dictionary of processed results along with a formatted string given results from local uncertainty analysis. """ processed_results = {} for spc in sensitive_species: total_var, reaction_u, thermo_u = results[s...
7fc1c63df0d93bff37342c7ae65c8a9926412c71
685,745
def product(pmt1, pmt2): """ the product of two permutations """ nelem = len(pmt1) assert sorted(pmt1) == sorted(pmt2) == list(range(nelem)) prod = tuple(pmt2[i] for i in pmt1) return prod
3dfd288f921aa0de6b6ba4cc224a1c112a217068
685,746
from typing import Set from typing import Dict def make_indices_to_labels(labels: Set[str]) -> Dict[int, str]: """ Creates a mapping from indices to labels. """ return {index: label for index, label in enumerate(["pad"] + sorted(list(labels)))}
def903371ae37f33db1a0e4db064c4f9d68c9531
685,747
def _to_int(self) -> int: """Convert named tuples with _field_bits attribute to int.""" num = 0 for value, (_, shift) in zip(self, self._field_bits): num |= (value << shift) return num
71dd0fd8997b2508a7c41002d9a86fe79500e4b5
685,748
def pstring(state, num): """Return a nice string give a state and its count. Example: >>> pstring(X(0,-1,1),4) ( 0, *, 1) : 4 """ a,b,c = state if b == -1: b = " *" return f"({a:2},{b:2},{c:2}) : {num:2}"
3af8fe9b35d43dbca4f03b98c0f43721c6822203
685,749