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def get_answers(request): """ Function to gather the form's input values by name: 'choice' """ submitted_answers = [] for key in request.POST: if key.startswith('choice'): value = request.POST[key] choice_id = int(value) submitted_answers.append(choice_id...
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def calculate_resize_scale(oringin_image_size, cluster_image_size): """ :param oringin_image_size: 图像原本的尺度 (h, w) :param cluster_image_size: 在所需要训练的尺度下图像的大小 (h, w) :return: scale 返回需要转换为cluster_image_size需要变换的尺度 """ o_h, o_w = oringin_image_size h, w = cluster_image_size return min(h/o_h...
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def precision(c, tweets): """Computes precision for class `c` on the specified test data.""" tp = 0 fp = 0 for tweet in tweets: if c in tweet['predictions']: if c in tweet['tags']: tp+=1 else: fp+=1 if(tp+fp == 0): return floa...
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def getBondedNeighborLists(atoms, bondProxies): """ Helper function to produce a dictionary of lists that contain all bonded neighbors for each atom in a set of atoms. :param atoms: Flex array of atoms (could be obtained using model.get_atoms() if there are no chains with multiple conformations, must ...
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def format_fasta(title, sequence): """ This formats a fasta sequence Input: title - String - Title of the sequence sequence - String - Actual sequence Output: String - Fully formatted fasta sequence """ fasta_width = 70 # Number of characters in one line n_lines = 1 + le...
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def list_find(list1, list2): """在list1中寻找子串list2,如果找到,返回第一个下标; 如果找不到,返回-1。 """ n_list2 = len(list2) for i in range(len(list1)): if list1[i: i+n_list2] == list2: return i return -1
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def getLocalhostName(): """What is my name?""" return str(u'Pocket')
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def get_str_bytes_length(value: str) -> int: """ - source: https://stackoverflow.com/a/30686735/8445442 """ return len(value.encode("utf-8"))
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def site_root_site_traverser(context): """Site root ++etc++site traverser extension""" return context.getSiteManager()
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def authorize_security_group_ingress(ec2_c, sg_id, port): """ Alows us to open a TCP port. """ try: ec2_c.authorize_security_group_ingress( GroupId=sg_id.id, IpPermissions=[{ 'IpProtocol': 'tcp', 'FromPort': int(port), 'ToPort': int...
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def add_mutator_group(argparser, name): """Add a new argument group for a mutator group""" return argparser.add_argument_group('{} mutator arguments'.format(name), help_name = name, help_group = 'mutator help', help_text = 'show help for {} mutators')
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def vecBetweenBoxes(obj1, obj2): """A distance function between two TextBoxes. Consider the bounding rectangle for obj1 and obj2. Return vector between 2 boxes boundaries if they don't overlap, otherwise returns vector betweeen boxes centers +------+..........+ (x1, y1) | obj1 | ...
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def ccd_quad_to_rc(ccd: int, quad: int) -> int: """Convert ZTF CCD/QUADRANT to readout channel number :param ccd: :param quad: :return: """ if ccd not in range(1, 17): raise ValueError("Bad CCD number") if quad not in range(1, 5): raise ValueError("Bad QUADRANT number") ...
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def delete_cluster(redshift, DWH_CLUSTER_IDENTIFIER): """ Request a deletion for Redshift cluster @type redshift -- @param redshift -- Redshift resource client @type DWH_CLUSTER_IDENTIFIER -- string @param DWH_CLUSTER_IDENTIFIER -- value from config file @return -- None """ return ...
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def clip(string: str, length: int, suffix = "...") -> str: """Clip string to max length If input `string` has less than `length` characters, then return the original string. If `length` is less than the number of charecters in `suffix`, then return `string` truncated to `length`. Oth...
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import json def create_chat_config_file(path: str): """Функция "create_config_file" - создает новый конфиг.""" data = { 'chats': [{}] } with open(path, 'w', encoding='utf-8') as new_config: json.dump(data, new_config, indent=4) return data
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def args_trans(args): """Parameters transform that must be specified.""" params = {} ################################################################# params["eta"] = args["eta"] * 0.01 + 0.01 params["nrounds"] = args["nrounds"] * 10 + 80 params['max_depth'] = 2 + args["max_depth"] params[...
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def normalize(string): """Returns a string without outer quotes or whitespace.""" return string.strip("'\" ")
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import ast def is_ast_equal(node_a: ast.AST, node_b: ast.AST) -> bool: """ Compare two ast tree using ast dump """ return ast.dump(node_a) == ast.dump(node_b)
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def decode_text_field(buf): """ Convert char[] string in buffer to python str object :param buf: bytearray with array of chars :return: string """ return buf.decode().strip(b'\x00'.decode())
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def is_prime(number): """Check if a number is prime.""" if number < 2: return False if number == 2: return True if number % 2 == 0: return False for _ in range(3, int(number ** 0.5) + 1, 2): if number % _ == 0: return False return True
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import torch def subtract_pose(pose_a, pose_b): """ Compute pose of pose_b in the egocentric coordinate frame of pose_a. Inputs: pose_a - (bs, 3) --- (x, y, theta) pose_b - (bs, 3) --- (x, y, theta) Conventions: The origin is at the center of the map. X is upward with ...
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from pathlib import Path import os def convert_to_svg(dvi_file, extension, page=1): """Converts a .dvi, .xdv, or .pdf file into an svg using dvisvgm. Parameters ---------- dvi_file : :class:`str` File name of the input file to be converted. extension : :class:`str` String containi...
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from pathlib import Path def setup(opts): """Set up directory for this GenomeHubs instance and handle reset.""" Path(opts["hub-path"]).mkdir(parents=True, exist_ok=True) return True
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def accuracy(true_positives, true_negatives, false_positives, false_negatives, description=None): """Returns the accuracy, calculated as: (true_positives+true_negatives)/(true_positives+false_positives+true_negatives+false_negatives) """ true_positives = float(true_positives) true_...
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def effective_stiffness(mass_eff, t_eff): """ Calculates the effective period based on the mass and period :param mass_eff: effective mass :param t_eff: effective period :return: """ return (4 * 3.141 ** 2 * mass_eff) / t_eff ** 2
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import argparse def get_args(): """" collects command line arguments """ argparser = argparse.ArgumentParser(description=__doc__) argparser.add_argument('--config', default=None, type=str, help='configuration file') argparser.add_argument('--exp_name', default=None, ...
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def rate_color(rate: int, units: str = '') -> str: """ Get color schema for percentage value. Color schema looks like red-yellow-green scale for values 0-50-100. """ color = '[red]' if 30 > rate > 20: color = '[orange_red1]' if 50 > rate > 30: color = '[dark_orange]' if 7...
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def get_gcharts_column_data(data, data_label, data_color, data_annotation): """ Get data for the column chart """ return_data = '' j = len(data)-1 i = 0 while i <= j: return_data = return_data +\ '["'+ str(data_label[i]) +'", '+\ str(data[i]) +', "'+\ str(data_color[i...
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import time def get_duration_timestamp(day=7): """ 获取当前时间和7天前的时间戳 :param day: :return: """ # 当前时间对应的时间戳 end = int(round(time.time() * 1000)) # 7天前的时间戳 start = end - day * 24 * 60 * 60 * 1000 return start, end
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import os def get_log_level(): """ This function gets the LogLevel from the environment variables table. """ return os.environ.get('LOG_LEVEL', 'INFO')
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def _match_cookie(flow_to_install, stored_flow_dict): """Check if a the cookie and its mask matches between the flows.""" cookie = flow_to_install.get("cookie", 0) & flow_to_install.get("cookie_mask", 0) cookie_stored = stored_flow_dict.get("cookie", 0) & flow_to_install.get( "cookie_mask", 0 ) ...
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def pass_through_filter(cloud, filter_axis='z', axis_limit=(0.6, 1.1)): """ Cut off filter Params: cloud: pcl.PCLPointCloud2 filter_axis: 'z'|'y'|'x' axis axis_limit: range Returns: filtered cloud: pcl.PCLPointCloud2 """ # Create a PassThrough filter object. ...
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def clean_text_up(text: str) -> str: """ Remove duplicate spaces from str and strip it. """ return ' '.join(text.split()).strip()
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import argparse def parse_args(): """ Parses command line arguments. """ parser = argparse.ArgumentParser() parser.add_argument('--n', dest='pkg_name', action='store', required=True, help="Name of the package.") parser.add_argument('--l', dest='pkg_loc', default='', ac...
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import os def get_files_in_directory(path, absolute, recursive=True): """Read a directory and return a list of filenames Parameters ---------- directory: `path` directory path absolute: `bool` True if absolute file path is desired recursive: `bool` ...
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def pitremove(np, input, output): """ command: pitremove -z dem.tif -fel demfel.tif, demfile: input elevation grid, felfile: output elevations with pits filled """ pitremove = "mpirun -np {} pitremove -z {} -fel {}".format( np, input, output) return pitremove
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def case_convert(snakecase_string: str) -> str: """Converts snake case string to pascal string Args: snakecase_string (str): snakecase string Returns: str: Pascal string """ return snakecase_string.replace("_", " ").title().replace("Cnn", "CNN")
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import asyncio def get_running_loop(): """get_running_loop that supports Python 3.6.""" if hasattr(asyncio, "get_running_loop"): return asyncio.get_running_loop() else: return asyncio.get_event_loop()
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def current_ratio(current_assets, current_liabilities, inventory = 0): """Computes current ratio. Parameters ---------- current_assets : int or float Current assets current_liabilities : int or float Current liabilities inventory: int or float Inventory Returns ...
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def format_string(input): """ Remove whitespaces and xml annotations """ # Remove xml annotation from input_format input = input.replace('xsd:', '') # Replace whitespaces with spaces input = " ".join(input.split()) # Strip the output return input.strip()
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def ci(_tuple): """ Combine indices """ return "-".join([str(i) for i in _tuple])
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def base_point_finder(line1, line2, y=720): """ This function calculates the base point of the suggested path by averaging the x coordinates of both detected lines at the highest y value. :param line1: Coefficients of equation of first line in standard form as a tuple. :param line2: Coefficients of ...
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def expand_var(v, env): """ If v is a variable reference (for example: '$myvar'), replace it using the supplied env dictionary. Args: v: the variable to replace if needed. env: user supplied dictionary. Raises: Exception if v is a variable reference but it is not found in env. """ if len(v...
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from typing import List def is_primary_stressed(syllable: List[str]) -> bool: """ Checks if a syllables is primary stressed or not. :param syllable: represented as a list of phonemes :return: True or False """ return True if any(phoneme.endswith('1') for phoneme in syllable) else False
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def count_bad_pixels_per_block(x, y, bad_bins_x, bad_bins_y): """ Calculate number of "bad" pixels per rectangular block of a contact map "Bad" pixels are inferred from the balancing weight column `weight_name` or provided directly in the form of an array `bad_bins`. Setting `weight_name` and `bad...
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def merge_regions_and_departments(regions, departments): """Merge regions and departments in one DataFrame. The columns in the final DataFrame should be: ['code_reg', 'name_reg', 'code_dep', 'name_dep'] """ columns = ['code_reg', 'name_reg', 'code_dep', ...
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def confusion_matrix(simple, pred): """混淆矩阵 :param simple:实际样本分类列表 :param pred:预测样本分类列表 :return TP,TN,FP,FN """ tp, tn, fp, fn = 0, 0, 0, 0 for s, p in zip(simple, pred): if s == p == 1: # 将正类预测为正类数 tp += 1 elif s == p == 0: # 将负类预测为负类数 tn += 1 ...
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import warnings def precise_reconciliation_efficiency(r, i, h, q, p, d): """ Identifies the reconciliation efficiency to be used with extremely high precision under a given set of parameters. :param r: The code rate. :param i: The estimated mutual information. :param h: The estimated entropy. ...
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import re def _not_none_and_len(string: str) -> bool: """helper to figure out if not none and string is populated""" is_str = isinstance(string, str) has_len = False if re.match(r"\S{5,}", "") is None else True status = True if has_len and is_str else False return status
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def ms_attacks(exploit): """ Receives the input given by the user from create_payload.py """ return { '1': "dll_hijacking", '2': "unc_embed", '3': "exploit/windows/fileformat/ms15_100_mcl_exe", '4': "exploit/windows/fileformat/ms14_017_rtf", '5': "exploit/windows/filefor...
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def get_latest_year_term(year_term_list): """ Args: year_term_list -> List[(year: int, term: int)] Return: year_term -> (year: int, term: int) """ if len(year_term_list) == 0: raise Exception("get_latest_year_term() error: データが空です") year_term_list.sort(reverse=True) ...
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def scale_to_255(image_array): """Default normalizing functor to scale image to [0, 255]""" a_min = min(image_array.min(), 0) a_max = image_array.max() image_array = (image_array - a_min)/ (a_max - a_min) * 255 return image_array
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def xnnpack_min_size_copts(): """Compiler flags for size-optimized builds.""" return ["-Os"]
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import io def csv_parseln( p_line, delim=',', quote='\"', esc='\\'): """ Given a sample CSV line, this function will parse the line into a list of cells representing that CSV row. If the given `p_line` contains newline characters, only the content present before the first newline character is parsed. ...
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def get_area_of_rural_land_occupied_by_houses_2013(): """ Reported area of urban land occupied by houses in 2013 from the USDA ERS Major Land Uses Report :return: """ acres_to_sq_m_conversion = 4046.86 # value originally reported in million acres area_rural_residence = 106.3 # convert ...
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import torch def signed_volume(local_coords): """ Compute signed volume given ordered neighbor local coordinates :param local_coords: (n_tetrahedral_chiral_centers, 4, n_generated_confs, 3) :return: signed volume of each tetrahedral center (n_tetrahedral_chiral_centers, n_generated_confs) """ ...
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def es_document(idx, typ, id, field): """Returns a handle on a field in a document living in the ES store. This does not fetch the document, or even check that it exists. """ # Returns a dict instead of a custom object to ensure JSON serialization # works. return {'index': idx, 'type': typ, 'id...
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import os def dir_checker(aurox_dir_path): """ Checks to make sure there is a positions.csv file as well as more than one .tiff file available in the directory. If so it sees this as an image directory and returns True. """ value1 = 0 value2 = 0 for file in os.listdir(aur...
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def rechunk_da(da, sample_chunks): """ Args: da: xarray DataArray sample_chunks: Chunk size in sample dimensions Returns: da: xarray DataArray rechunked """ lev_str = [s for s in list(da.coords) if 'lev' in s][0] return da.chunk({'sample': sample_chunks, lev_str: da.coo...
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from typing import List def denormalize_identity(texts: List[str], verbose=False) -> List[str]: """ Identity function. Returns input unchanged Args: texts: input strings Returns input strings """ return texts
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def format_access_token(access_token): """Display all the parameters of the Access Token""" print(access_token) ret = '<h2>Access Token</h2>' ret += '<table class="pure-table">' if access_token.error_code != None: ret += '<tr><td>Error Code</td><td>' + str(access_token.error_code) + '</td...
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import math def calculate_fuel_requirement_plus(fuel): """Calculates the fuel requirement based on the given fuel mass. (Part 2) Parameters: fuel (int): mass of the fuel Returns: int:Additional fuel required """ add = math.floor(fuel / 3) - 2 if add > 0: return add + ca...
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def get_data_root(registry): """ :type registry: pyramid.registry.Registry :rtype: Path """ return registry.data_root
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def get_secret(client, mount, path): """ retreiive existing data from mount path and return dictionary """ result = {'data': {}} try: if client.secrets.kv.default_kv_version == '1': result = client.secrets.kv.v1.read_secret(path=path, mount_point=mount) else: result =...
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def assumed_metric(y_true, y_pred, metric, assume_unlabeled=0, **kwargs): """ This will wrap a metric so that you can pass it in and it will compute it on labeled and unlabeled instances converting unlabeled to assume_unlabeled Assumption: label -1 == unlabled, 0 == negative, 1 == positive """ ...
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from typing import List import os def get_previously_completed_dates() -> List[str]: """Get a list of dates the tool has already imported time entry. Used to avoid duplication of time entry.""" if not os.path.exists('completed_dates.txt'): return [] with open('completed_dates.txt', 'r') as file: ...
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def _add_multiple_locations(row): """A function to add the victim types. To be used with pandas.DataFrame.apply().""" if ';' in row['LOCATION_NAME']: row['MULTIPLE_LOCATION_NAME'] = 'M' else: row['MULTIPLE_LOCATION_NAME'] = 'S' return row
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def _HELP_convert_RMSD_nm2angstrom(RMSD_nm): """ Helpfunction for plot_HEATMAP_REX_RMSD(): convert RMSD values: RMSD_nm -> RMSD_anstrom Args: RMSD_nm (list): rmsd values in nm Returns: RMSD (list) rmsd values in angstrom """ RMSD = [x*10 for x in RMSD_nm] re...
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from pathlib import Path import json def read_features(corpus_folder): """Read the dictionary of each poem in "corpus_folder" and return the list of python dictionaries :param corpus_folder: Local folder where the corpus is located :return: List of python dictionaries with the poems features """ ...
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def test_unlimited(x, expected): """Tests that check_args does nothing""" def unlimited(x): for i in list(range(10 ** 8)): _ = 1 + 1 return x assert unlimited(x) == expected
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def static_vars(**kwargs): """ Attach static variables to a function. Usage: @static_vars(k1=v1, k2=k2, ...) def myfunc(...): myfunc.k1... Parameters: **kwargs Keyword=value pairs converted to static variables in decorated function. Returns: decorate """ def decor...
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import argparse import os def parse_args(): """Load SageMaker training job (hyper)-parameters from CLI and environment variables""" parser = argparse.ArgumentParser() # Training procedure parameters: parser.add_argument( "--batch-size", type=int, default=64, metavar="N...
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import uuid def random_suffix() -> str: """랜덤 ID뒤에 붙일 UUID 기반의 6자리 임의의 ID를 생성합니다.""" return uuid.uuid4().hex[:6]
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def header_types(): """ Just returns all the headers we need to test """ return [ "content-length", "content-encoding", "accept-ranges", "vary", "connection", "via", "cache-control", "date", "content-type", "age", ]
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def parse_slack_output(slack_rtm_output): """ The Slack Real Time Messaging API is an events firehose. this parsing function returns None unless a message starts with ?. """ output_list = slack_rtm_output if output_list and len(output_list) > 0: for output in output_list...
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def flatten(iter_of_iters): """ Flatten an iterator of iterators into a single, long iterator, exhausting each subiterator in turn. >>> flatten([[1, 2], [3, 4]]) [1, 2, 3, 4] """ retval = [] for val in iter_of_iters: retval.extend(val) return retval
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def select_per_taxon_stats(cxn, iteration): """Get data for the per taxon summary report.""" return cxn.execute( """ WITH properties AS ( SELECT taxon_name, ref_name, CAST(SUM(LENGTH(seq)) / 3 AS REAL) / CAST(LENGTH(ref_seq) AS REAL) AS p...
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def is_number(s): """ Checks if the variable is a number. :param s: the variable :return: True if it is, otherwise False """ try: # Don't need to check for int, if it can pass as a float then it's a number float(s) return True except ValueError: return False
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def mock_debian(tmpdir): """A fake Debian multi-install system""" tmpdir.ensure("share/gdal/1.11/header.dxf") tmpdir.ensure("share/gdal/2.0/header.dxf") tmpdir.ensure("share/gdal/2.1/header.dxf") tmpdir.ensure("share/gdal/2.2/header.dxf") tmpdir.ensure("share/gdal/2.3/header.dxf") tmpdir.ens...
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def get_info(els): """Function: get_info Description: Return a dictionary of a basic Elasticsearch info command. Arguments: (input) els -> ElasticSearch instance. (output) Dictionary of basic Elasticsearch info command. """ return els.info()
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def cronify(string): """Prepare normal commands for cron""" return string.replace('%', '\%')
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import math def cond_loglik_bpd(model, x, context): """Compute the log-likelihood in bits per dim.""" return - model.log_prob(x, context).sum() / (math.log(2) * x.shape.numel())
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import threading def create_thread(func, args): """Creates a thread with specified function and arguments""" thread = threading.Thread(target=func, args=args) thread.start() return thread
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def calculate_stretch_factor(array_length_samples, overlap_ms, sr): """Determine stretch factor to add `overlap_ms` to length of signal.""" length_ms = array_length_samples / sr * 1000 return (length_ms + overlap_ms) / length_ms
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def half_adder(a, b): """ ha_carry_out, ha_sum = a + b """ ha_sum = a ^ b ha_carry_out = a & b return ha_sum, ha_carry_out
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import random def SamplesWithReplacement(t, n): """ 有放回抽样 """ sample = [ random.choice(t) for i in range(n) ] return sample
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def nothing(text: str, expression: str) -> bool: # pylint: disable=unused-argument """Always returns False""" return False
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from win32com.client import Dispatch # Import library only if function is called def j2000_to_jnow_novas(ra_j2000_hours, dec_j2000_degs): """ Given J2000 coordinates (ra in hours, dec in degrees), return Jnow coordinates as a tuple: (ra_hours, dec_degs) Uses the NOVAS library to do the calc...
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def create_security_group(conn, secgrp_name, project_id_in): """ create a security group from a name """ os_security_group = conn.network.create_security_group( name = secgrp_name, description = "S3P secgrp: Allow ICMP + SSH", project_id = project_id_in ) retu...
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import requests def read_build_cause(job_url, build_id): """Read cause why the e2e job has been started.""" api_query = job_url + "/" + str(build_id) + "/api/json" response = requests.get(api_query) actions = response.json()["actions"] cause = None for action in actions: if "_class" i...
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import enum def default_serializer(o): """JSON serializer for complex objects.""" if isinstance(o, enum.Enum): return o.value return o.__dict__
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import re def version_tuple_from_str(version, nelem=None): """Split a version string using '.' and '-' as separators and return a tuple of integers.""" re_match = re.match(r'([0-9.,_-]+\d+)|(\d+)', version) if re_match: version_list = re.split('[.,_-]', re_match.group(0)) if nelem is not N...
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import re def to_valid_filename(filename: str) -> str: """Given any string, return a valid filename. For this purpose, filenames are expected to be all lower-cased, and we err on the side of being more restrictive with allowed characters, including not allowing space. Args: filename (str...
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import subprocess def annotate_frame(data): """ Annotate frames with convert from imagemagick Parameters ---------- data: Tuple(int, list, float) frame number, frame_data, time step (ns) """ frame, frame_data, timestep = data in_path, out_path, font, font_size, line_width, ax...
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def collapse_sided_value(value): """Inverses `expand_sided_value`, returning the most optimal form of four-sided value. """ if not isinstance(value, (tuple, list)): return value elif len(value) == 1: return value[0] elif len(value) == 2: if value[0] == value[1]: return value[0] else: ...
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def shapes(tensors): """Get the static shapes of tensors in a list. Arguments: tensors: an iterable of `tf.Tensor`. Returns: a `list` of `tf.TensorShape`, one for each tensor in `tensors`, representing their static shape (via `tf.Tensor.get_shape()`). """ return [t.get_shape() ...
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import functools def yield_for_change(widget, attribute): """Pause a generator to wait for a widget change event. This is a decorator for a generator function which pauses the generator on yield until the given widget attribute changes. The new value of the attribute is sent to the generator and is t...
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def get_4d_idx(day): """ A small utility function for indexing into a 4D dataset represented as a 3D dataset. [month, level, y, x], where level contains 37 levels, and day contains 28, 29, 30 or 31 days. """ start = 1 + 37 * (day - 1) stop = start + 37 return list(range(start, stop, ...
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def cookielaw(request): """Add cookielaw context variable to the context.""" cookie = request.COOKIES.get('cookielaw_accepted') return { 'cookielaw': { 'notset': cookie is None, 'accepted': cookie == '1', 'rejected': cookie == '0', } }
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