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def plugins_by_name(pm): """ Organize plugins by plugin name. Returns a dict where the key is the plugin name and the value is a list of all plugins that have that name. """ plugins = {} for plugin in pm.plugins: if plugin.name not in plugins: plugins[plugin.name] = [] ...
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def rivers_with_station(stations): """input of list of monitoring station type. Output a set of rivers which have stations.""" riverstation = set() #initialise set for i in stations: riverstation.add(i.river) #adds river name to set for every station return riverstation
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import random def random_start_goal(width=10, start_bounds=None, goal_bounds=None): """Return a random distinct start position in start_bounds and a random goal position in goal_bounds :param width: width of the grid :param start_bounds: a tuple of tuples ((x0, x1), (y0, y1)) :param goal_bounds: a tu...
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def round_(i: int, size: int) -> int: """ Round `i` to the nearest greater-or-equal-to multiple of `size`. """ if i % size == 0: return i return i + (size - (i % size))
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def find_from_iterable(it) -> set: """ Find all unique conditions in given iterable object. :param it: Iterable object to traverse. :return Set of all unique available conditions. """ cond = set() for i in it: if i not in cond: cond.add(i) return cond
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from typing import Callable def map_to_user_params(*args_to_params: str) -> Callable[[dict], dict]: """Make a function that reads plugin arguments from user_params. The returned function can usually be directly assigned to the args_from_user_params attribute of plugin classes. :param args_to_params:...
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import math def categorize(distance: float) -> int: """Distance binning method to be referenced across data analysis files and classifiers. Args: distance (float): The premeasured distance, in meters. Returns: The floor of the given distance amount. """ return math.floor(distance...
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def _sort_key(name): """Sorting helper for members of a directory.""" return name.lower().lstrip("_")
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import os def pages(request): """Return the url of a page from the test files""" def pages_(*path): path = os.path.abspath( os.path.join(os.path.dirname(__file__), "pages", *path) ) return "file://" + path return pages_
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def sum_of_diffs(*args): """Compute sum of diffs""" total = 0 for v1, v2 in zip(args[0], args[1]): total += v2 - v1 return total
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import torch def concat_feat_var(src, tgt): """Concatate feature variable.""" if src is None: out = tgt else: out = torch.cat([src, tgt]) return out
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def isOnlySpecialCharacters(word): """ Checks if the string passed is comprised entirely of special characters typically allowed in passwords """ for i in range(len(word)): if word[i].isalpha() or word[i].isdigit(): return False return True
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def evaluate_predictions(test_y, predictions): """ Evaluate on the test set. """ assert len(test_y) == len(predictions) right_cycle = 0 right_menstr = 0 for idx, y in enumerate(test_y): if y[0] == predictions[idx][0]: right_cycle += 1 if y[1] == predictions[idx][1]: ...
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def view_to_world(pos, renderer): """ :param pos: list :param renderer: vtk.vtkRenderer :return: list """ renderer.SetViewPoint(pos) renderer.ViewToWorld() return renderer.GetWorldPoint()
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def PGetTable (inUV, access, tabType, tabVer, err, \ numOrb=0, numPCal=3, numIF=1, numPol=1, \ numTerm=0, numChan=1, numTones=1, numBand=1, \ numTabs=1, npoly=1, numCoef=5, maxis1=2, maxis2=1, maxis3=1, maxis4=1, maxis5=1): """ Return (create)the specified...
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import numpy def compute_iss_diff(e, x, incentive): """Computes the difference of the LHS and RHS of the ISS condition.""" i = incentive(x) s = numpy.sum(incentive(x)) lhs = sum(e[j] / x[j] * i[j] for j in range(x.size)) return lhs - s
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import time def get_elapsed_time_ms(start_time_in_seconds): """ Returns the elapsed time in millis from the given start time. """ end_time = time.time() return int((end_time - start_time_in_seconds) * 1000)
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import os def join_basedir(basedir): """ Return a shortcut function to join basedir to given path """ def proceed_joining(path): return os.path.join(basedir, path) return proceed_joining
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def EPSILON_0(): """ The `EPSILON_0` function returns the Obliquity of the ecliptic at J2000.0 according to the IERS numerical standards (2010). """ return 84381.406
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def get_urls(link, nb): """ Generate a list containing all URLs Args: link [str]: Base HTML link nb [int]: Number of pages usingHTML link Returns: url [str]: [List containing all URLs] """ def gen_season_index(): for i in range(2000, 2020): yield i...
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from typing import Optional import re def email_is_valid(email: Optional[str]) -> bool: """ Validate that a valid email was provided. None is a valid option. Parameters ---------- email: Optional[str] The email to validate. Returns ------- status: bool The valida...
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def sanitize_for_shell(string): """ Return `string` with double quotes escaped for use in a Windows shell command. """ return string.replace('"', r'\"')
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import sys import unicodedata def remove_punctuation_dict() -> dict: """Provide a dictionary for removing punctuation, swallowing spaces. :return dict with punctuation from the unicode table >>> print("I'm ok! Oh #%&*()[]{}!? Fine!".translate( ... remove_punctuation_dict()).lstrip()) Im ok Oh Fi...
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def tanimoto(list1, list2): """tanimoto coefficient In [2]: list2=['39229', '31995', '32015'] In [3]: list1=['31936', '35989', '27489', '39229', '15468', '31993', '26478'] In [4]: tanimoto(list1,list2) Out[4]: 0.1111111111111111 Uses intersection of two sets to determine numerical score "...
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import struct import base64 def _serialize_linear_biases(linear, nodelist): """Serializes the linear biases. Args: linear: a interable object where linear[v] is the bias associated with v. nodelist (list): an ordered iterable containing the nodes. Returns: str: base 6...
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from typing import IO from typing import Tuple from typing import Optional def solve_task(input_io: IO, slope: Tuple[int, int]) -> int: """ Solves task 1: number of trees for slope right 3 down 1. Parameters ---------- input_io: IO Map stream. slope: (slope_right: int, slope_down: in...
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def _pos_round(position): """ Returns the rounded `position`. **Don't require Pygame.** **(Not available in SimpleGUI of CodeSkulptor.)** :param position: (int or float, int or float) or [int or float, int or float] :return: (int, int) """ assert isinstance(posit...
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def lucas(n): """TO RETURNS THE nth VALUE OF THE LUCAS NUMBERS.""" luc = [2, 1] if n < 0: print('The number cannot be negative.') return('The number cannot be negative.') elif n > 999: print('The number is too big. Please enter a number between 0 and 999.') return('The nu...
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def compute_open_lead(df, shift=-1): """Compute leading indicator for open.""" open_lead = df.groupby("store")["open"].shift(shift) return open_lead.combine_first(df["day_of_week"].ne(6).astype("double"))
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def get_sampling_error(mu, xbar): """ Sampling error is defined as the difference between mean of the population and mean of the sample. Parameters ---------- mu: mean of the parameter xbar: mean of the sample Returns ------- The sampling error mu-xbar. """ return mu - xba...
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def expected_base_paths(configuration): """API base paths e.g ['/api/indexd', '/api/leo', '/api/sheepdog', '/api/peregrine', '/api/dockstore'].""" return [api['paths']['base'] for api in configuration['apis']]
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def custom_formatwarning(message, category, filename, lineno, line=""): """Ignore everything except the message.""" return "Warning: " + str(message) + "\n"
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def is_valid_ohlc(ohlc_row): """ ohlc format: (open,high,low,close,volume) """ _open, _high, _low, _close, _volume = ohlc_row isin_bunds = lambda v: v >= _low and v <= _high return _high >= _low and isin_bunds(_open) and isin_bunds(_close) and _volume >= 0
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def _sdiff(s1, s2): """return symmetric diff of strings s1 and s2, as a tuple of (letters unique to s1, letters common to both, letters unique to s2. s1 and s2 must be strings with letters in sorted order """ if s1 == s2: return ('', s1, '') i1 = i2 = 0 u1 = u2 = i = "" whil...
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import logging def get_logger(): """ in case we want to use the common logger from a procedural interface """ return logging.getLogger()
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def income2(households): """ Dummy for for income group 2 """ return (households['income_category'] == 'income group 2').astype(int)
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import configparser def load_config(config_file): """It loads and return the config file.""" config = configparser.ConfigParser(allow_no_value=True) config.read(config_file) return config
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def read_list_to_annotate(filename): """ Reads the file containing the paths to the images. Textfile """ img_paths = [] with open(filename, "r") as f: for line in f: img_paths.append(str(line).rstrip('\n')) print("Loaded names of {} images.".format(len(set(img_paths)))) ...
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def get_face_id(row): """ Extract the face id from the annotations. """ return row[7]
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import operator def sort(word_freq): """ Takes a dictionary of words and their frequencies and returns a list of pairs where the entries are sorted by frequency """ return sorted(word_freq.iteritems(), key=operator.itemgetter(1), reverse=True)
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def getScreenWidth(): """A stub implementation of the xbmcgui getScreenWidth() function""" return 1920
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def gather_points(points, index): """Gather xyz of centroids according to indices Args: points: (batch_size, channels, num_points) index: (batch_size, num_centroids) Returns: new_xyz (torch.Tensor): (batch_size, channels, num_centroids) """ batch_size = points.size(0) ...
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def diagonal_path(size): """ Creates a set of diagonal paths moving from the top left to the bottom right of the image. Successive rows start at the bottom-left corner and move up until the top-right corner. :param size: The dimensions of the image (width, height) :return: A generator that yields a ...
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def worldregions(): """ Populates the drop down menu with the list of available shapefiles to use for averaging Dependencies: os, App (app) """ return ( ('All World Regions', ''), ('Antarctica', 'Antarctica'), ('Asiatic Russia', 'Asiatic Russia'), ('Australia/New Zeal...
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def pluralize(text, n, suffix="s"): """Return TEXT pluralized if N != 1.""" if n != 1: return "%s%s" % (text, suffix) else: return text
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import json def parse_response_content(response): """Try to load json response If fail just return string response """ try: return json.loads(response.content.decode()) except json.JSONDecodeError: return response.content.decode()
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def steps_per_quarter_to_steps_per_second(steps_per_quarter, qpm): """Calculates steps per second given steps_per_quarter and a qpm.""" return steps_per_quarter * qpm / 60.0
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def get_paragraph(doc): """convert from raw text to a list containing paragraphs""" return doc.split('\n')
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def map2matrix(matrix_size, index): """Map index in a time series to the corresponding index in the matrix. :param matrix_size: :param index: :return: index in the matrix """ row_index = index // matrix_size[1] col_index = index % matrix_size[1] matrix_index = (row_index, col_index) ...
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import csv def validate(args, limit_to=None): """Validate an input dictionary for Fisheries HST. Parameters: args (dict): The args dictionary. limit_to=None (str or None): If a string key, only this args parameter will be validated. If ``None``, all args parameters will be ...
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def split_lhs_rhs(expr): """Split the equation into left and right hand side. >>> split_lhs_rhs(" 12 + a ") (None, '12 + a') >>> split_lhs_rhs(" c = 12 + a ") ('c', '12 + a') """ expr = [x.strip() for x in expr.split("=")] if len(expr) == 1: rhs = expr[0] output = None ...
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def make_predictions(model, test_x): """ Make predictions """ predictions = model.predict(test_x) return predictions
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from typing import Counter def count_triplets(arr, r): """ For each elem in arr, find number of elements==elem*r and number of elements==elem/r We need to handle the edge case when r=1 though """ items_count = Counter(arr) g_p = 0 for i in arr: left_count = 0 ...
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def whisper(text): """Creates a response only the sender can see.""" return { "response_type" : "ephemeral", "text" : text }
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def get_test_json(): """Fixture to return a sample JSON response str""" return '[{"SYST": {"CFG": {"MTSP": "N", "NC": "00", "DF": "N", "TU": "C", "CF": "1", "VR": "0183", "CV": "0010", "CC": "043", "ZA": " ", "ZB": " ", "ZC": " ", "ZD": " " }, "AVM": {"HG": "Y", "EC": "N", "CG": "Y", "RA": "N", "RH": "N", "RC":...
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import re def find_profile_links(soup, search_string): """ Find links in html based on the class and string content of a div Required Parameters: soup: a BeautifulSoup object search_string: the type of link to search for; must match html exactly """ profile_links = {} div_prefix = soup.find('div', class_='h...
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def is_community_role(role): """Test if a given role belongs to a community. Returns: (bool) True if the role belongs to a community """ return len(role.name) > 4 and role.name[:4] == 'com:'
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import json def json_write_data(json_data, filename): """Write json data into a file """ with open(filename, 'w') as fp: json.dump(json_data, fp, indent=4, sort_keys=True, ensure_ascii=False) return True return False
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def load_rubik(): """ Loads a rubik's cube from save.rubik Returns ------- rubik: list The loaded cube """ try: with open("custom_files/save.rubik", "r") as savefile: # Open the save file rubik, counter = eval(str(savefile.readlines()[0]), {}) # Read t...
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def decodeDegreesStr(valStr): """ Return a signed latitude/longitude value from a string. Only copes with the integer values used in grid cell names. """ val = int(valStr[:-1]) if valStr[-1] in ("S", "W"): val = -val return val
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def get_results(combinations, config_dict): """ This function finds for each mission its most resilient configuration and probability. :param combinations: dictionary which contains for each mission its configurations :param config_dict: dictionary which contains for each configuration and goal host ...
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def parse_description(description: str) -> str: """ Make an effort to make the description more human """ if 'Alcoholic beverage, ' in description: return description[20:] if 'Alcoholic beverages, ' in description: return description[21:] return description
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def bookmarklet() -> str: """Return the full bookmarklet. Returns: The contents of the bookmarklet, ready to be installed """ snippet = """(() => { let apipath = '/services/data/'; if (location.pathname === apipath) { let sessid = (';' + document.cookie).split('; sid=')[1].split('; ')[0...
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def ones_like(x): """Return an array of the same shape as `x` containing only ones.""" return x * 0. + 1.
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def convert_schemas(mapping, schemas): """Convert schemas to be compatible with storage schemas. Foreign keys related operations. Parameters ---------- mapping: dict Mapping between resource name and table name. schemas: list Returns ------- schemas: list """ for ...
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import torch def th_matrixcorr(x, y): """ return a correlation matrix between columns of x and columns of y. So, if X.size() == (1000,4) and Y.size() == (1000,5), then the result will be of size (4,5) with the (i,j) value equal to the pearsonr correlation coeff between column i in X and column j in Y """ me...
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import os import re def _CheckFilterFileFormat(input_api, output_api): """This ensures all modified filter files are free of common syntax errors. See the following for the correct syntax of these files: https://chromium.googlesource.com/chromium/src/+/master/testing/buildbot/filters/README.md#file-syntax As...
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def estimate_phones(x): """ Allocate consumption category given a specific luminosity. """ if x['mean_luminosity_km2'] > 5: return 10 elif x['mean_luminosity_km2'] > 1: return 5 else: return 1
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def get_analysis_csv(path, line): """get analysis csv""" count = 0 res = [] with open(path, 'r') as analysis_file: table_header = analysis_file.readline()[:-1].split(',') lines = analysis_file.readlines() while line + count < len(lines): line_list = lines[line + count...
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def repetition_a_eviter(serie, a_eviter=False): """ Une répétition à éviter. .. exref:: :title: Eviter d'effectuer le même appel deux fois :tag: Base - Dans cette fonction on calcule la variance d'une série d'observations. :: def moyenne(serie): ...
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import tempfile def get_temporary_directory_path(prefix, suffix): """ Get a temporary directory and files for artifacts :param prefix: name of the file :param suffix: .csv, .txt, .png etc :return: object to tempfile. """ temp = tempfile.NamedTemporaryFile(prefix=prefix, suffix=suffix) return temp
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def mask_status(data, column, mask_dict): """ Based on the "reopen" status types from NYT dataset, the status column is returned as integer representations. """ mask = 1 masked = data[column].apply(lambda x: mask if x in mask_dict[mask] else (mask + 1 if x in mask_dict[mask + 1] el...
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def predict_cluster_by_precomputed_distances(precomputed_distances): """ Predict a cluster for each object with precomputed distances. Parameters ---------- precomputed_distances : np.array array of shape (n_topics, n_objects) - distances from clusters to objects Returns ------- ...
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from typing import Any from typing import List def fill_array(variable: Any, default: Any, final_size: int) -> List[Any]: """Fills the default value for parameter that don't set values for all plots (keys) Parameters ---------- variable The parameter to fill values for default The...
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import os def aws_credentials(): """Set AWS credentials for testing""" os.environ['AWS_ACCESS_KEY_ID'] = 'testing' os.environ['AWS_SECRET_ACCESS_KEY'] = 'testing' os.environ['AWS_SECURITY_TOKEN'] = 'testing' os.environ['AWS_SESSION_TOKEN'] = 'testing' os.environ['SQS_POLLER_AWS_ACCESS_KEY_ID']...
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def g_coordinates(parameters, actual_pos): """returns 3 coordinates from a g-code""" # default values x = actual_pos[0] y = actual_pos[0] z = actual_pos[0] # parse text ...
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def import_component(name): """ As a workaround for __import__ behavior, returns extract the desired component >>> import_component('os').__name__ 'os' >>> import types >>> type(import_component('os.path.join')) == types.FunctionType True """ # Import component # As a workar...
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def split_rand_pick(df, splitting_column1, splitting_column2, splitting_column3): """ :param df: Target dataframe :param splitting_column1: Column in df with split indices :param splitting_column2: Column in df with split indices :param splitting_column3: Column in df with split indices :return...
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def load_gimp_palette(filename): """ For simplicity's sake, a palette is just an array of RGB values: palette = [ [r,g,b], [r,g,b], ... ] """ lines = open(filename, 'r').readlines() palette = [] for line in lines: if '#' in line: line = l...
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def hamming_distance(pattern1, pattern2): """Return the hamming distance between 2 patterns.""" if len(pattern1) == len(pattern2): return sum([ pattern1[index] != pattern2[index] for index in range(len(pattern1)) ]) raise Exception('Length of both reads do not match')
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def _make_properties(prop_names): """ Decorator function for adding public properties to classes This creates the property, and its getter and setter methods Dean comments: "_make_properties is a _very esoteric function, and I remember wondering if I should remove it because it decreases ...
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def to_pecha_id_link(pecha_id): """Return pecha_id_link for `pecha_id`.""" return f"[{pecha_id}](https://github.com/OpenPecha/{pecha_id})"
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from typing import List def generate_suqares_using_list_comprehensions(number: int) -> List[int]: """ >>> number = 5 >>> generate_suqares_using_list_comprehensions(number) [0, 1, 2, 3, 4] """ return [x for x in range(number)]
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import locale def get_locale_language(): """Get the language code for the current locale setting.""" return locale.getlocale()[0] or locale.getdefaultlocale()[0]
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import torch def d_change(prior, ground_truth): """Compute a change based metric of two sets of boxes. Args: prior (tensor): Prior boxes, Shape: [num_priors, 4] ground_truth (tensor): Ground truth bounding boxes, Shape: [num_objects, 4] """ xtl = torch.abs(prior[:, 0] - ground_truth[...
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def harmonic_series_tcr(n): """tail-call recursive""" def aux(n, acc): if not isinstance(n, int): raise TypeError("n must be an integer") elif n < 1: raise ValueError("n must be positive") elif n == 1: return acc else: return aux(n - 1, 1/n + acc) return aux(n, 1)
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def getTweetText(session, ids): """Get all tweets with all fields.""" params = ','.join(ids) qryText = "SELECT * FROM tweets WHERE tweet_id IN ({})".format(params) results = session.execute(qryText) return results
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def load_stop(pathes): """ pathes: 停用词路径list """ stopwords = [] for path in pathes: with open(path, 'r', encoding='utf-8') as f: for line in f.readlines(): stopwords.append(line.strip()) return list(set(stopwords))
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def assignment_display_name(assignment): """Get name for an assignment""" if assignment.session.type.slug == 'regular' and assignment.session.historic_group: return assignment.session.historic_group.name return assignment.session.name or assignment.timeslot.name
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import argparse import os def build_parser() -> argparse.ArgumentParser: """Build CLI parser""" parser = argparse.ArgumentParser( description=__doc__, formatter_class=argparse.ArgumentDefaultsHelpFormatter ) parser.add_argument( "--downsample", type=float, default=1.0, ...
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def is_df( df): """is_df Test if ``df`` is a valid ``pandas.DataFrame`` :param df: ``pandas.DataFrame`` """ return ( hasattr(df, 'to_json'))
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import re def parse_variant(variant): """ Parse specified genomic variant. Generally speaking, the input string should consist of chromosome, position, reference allele, and alternative allele separated by any one or combination of the following delimiters: ``-``, ``:``, ``>`` (e.g. '22-42127...
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def get_move_from_to(data): """ Gets move from and to from dataset :param data: dataset :return: move_from, move_to """ move_list = data[0][0][-64:] move_from = [9, 9] move_to = [9, 9] for i in range(len(move_list)): if move_list[i] == -1: move_from[0] = int(i/8) ...
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def get_point(msg): """(str) -> tuple prints a message specified by <msg> and allows the user to enter the (x, y, z) coordinates of a point. Returns the point as a tuple """ print(msg) x = float(input('Enter x coordinate: ')) y = float(input('Enter y coordinate: ')) z = float(input(...
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def traverse_to_end(bm, forwards = True): """ Traverses a Sterna Helix and returns the index and vertex of the final vertex. Args: bm -- bmesh, Sterna object KWArgs: forwards -- bool, direction of the traversal Returns: tuple<bmesh.Vertex, int> """ visited = set() ...
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import re def maybe_get_next_page_path(response): """ If a response is paginated, get the url for the next page. """ link_regex = re.compile(r'<([^>]*)>;\s*rel="([\w]*)\"') link_headers = response.headers.get("Link") next_page_path = None if link_headers: links = {} matched...
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def get_measurement_from_rule(rule): """ Return the name of the measurement from the Alert_Rule checkfield """ if len(rule.check_field.split('#')) == 2: model, measurement = rule.check_field.strip().split('#') return measurement elif len(rule.check_field.split('#')) == 1: ...
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def remove(*types): """Select a (list of) to be removed objects(s) >>> remove("registrationid1", "registrationid2") {'remove': ['registrationid1', 'registrationid2']} >>> remove("tag1", "tag2") {'remove': ['tag1', 'tag2']} >>> remove("alias1", "alias2") ...
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from typing import SupportsRound def iround(x: SupportsRound) -> int: """Rounds x and converts to int. Because round(np.float32) returns np.float32 instead of int. """ return int(round(x))
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import re def is_module(content): """Checks if the contents are from a Lua module. It looks for a returned value at the end of the file. If it finds one, it's safe to assume that it's a module. content : str The Lua source code to check. """ # We match any number of whitespace after...
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