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def get_pubkey(elem) -> str: """Returns the primary key element from a tag""" return elem.get('key')
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def getcoroutinelocals(coroutine): """ Get the mapping of coroutine local variables to their current values. A dict is returned, with the keys the local variable names and values the bound values.""" frame = getattr(coroutine, "cr_frame", None) if frame is not None: return frame.f_local...
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from unittest.mock import call def info_default(proc, var): """wrapper for 'info default'""" return call("safe_info_default", proc, var, to=tuple)
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import re def get_urls(clean_text): """ returns a link of potentially clickable emails """ for text in clean_text: urls = re.findall('http[s]?://(?:[a-zA-Z]|[0-9]|[$-_@.&+]|[!*\(\),]|(?:%[0-9a-fA-F][0-9a-fA-F]))+', text) return urls
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def prepare_credential_content(filename, itype=False, use_file=True): """ Format strings for inclusion in radl templates """ if use_file: with open(filename) as file_in: content = file_in.readlines() else: content = [] for line in filename.split(b'\n'): ...
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def round_tat(num): """Changes the turnaround time from a float into natural language hours + minutes.""" remain = num%1 if num.is_integer(): if int(num) == 1: return str(int(num)) + " hour." else: return str(int(num)) + " hours." else: if num < 1: return str(int(remain*60)) + " minutes." elif num-...
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import idna def domain_to_idna(passed_domain): """ Change unicode domain to bytes :param passed_domain: bytes or str object :return: bytes domain in idna format """ # make sure we are unicode if not isinstance(passed_domain, str): # domain is already bytes. Return as-is ret...
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def score_pop( population_value, min_population_acceptable=10, max_population_acceptable=30 ): """ :param population_value: population value to be scored :param min_population_acceptable: minimum population value in the scoring range (saturates at 0) :param max_population_acceptable: maximum populat...
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from typing import Mapping from typing import List def get_docstring(sections: Mapping[str, List[str]]) -> List[str]: """Get (unindeted) docstring from docker-compose <cmd> --help. Use general and usage section. :param sections: Output from `collect_help_lines` """ lines = sections["general"] if u...
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import random def cpu_choise(): """This function randomly selects five of the seven colors and returns them as a list.""" all_color = ("green","red","blue","pink","yellow","orange","gray") chois_color = random.sample(all_color,5) return chois_color
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def _first_upper(k): """Returns string k, with the first letter being upper-case""" return k[0].upper() + k[1:]
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def last_third_first_third_mid_third(seq): """with the last third, then first third, then the middle third in the new order.""" i = len(seq) // 3 return seq[-i:] + seq[:i] + seq[i:-i]
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def has_samples(args): """Returns whether there's some kind of sample option in the command """ return args.sample or args.samples or args.sample_tag
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def graph_order(graph): """Get graph order.""" graph = graph.get_vertices() order = len(graph.keys()) return order
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def find_all_indexes(text, pattern): """Return a list of starting indexes of all occurrences of pattern in text, or an empty list if not found. Time Complexity: O(n) where n is the number of characters between index 0 and our max_index Space Complexity: O(n) where n is the number of items in the array h...
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def remove_close(df, primary_distance_cutoff): """ This code will take what should ideally be a merged dataframe and cut any rows out according to the difference in their aa1_loc and aa2_loc columns. Which is to say, it will get rid of comparisons between amino acids that are too close to each other...
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def reload_attribute(model_instance, attr_name): """Fetch the stored value of a model instance attribute. :param model_instance: Model instance. :param attr_name: Attribute name to fetch. """ qs = type(model_instance).objects.filter(id=model_instance.id) return qs.values_list(attr_name, flat=Tr...
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import doctest def doctest_test(): """run test procedure with doctest""" # invoke the testmod function to run tests contained in docstring stats = doctest.testmod() print(stats) return stats
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import os def get_jpeg(path): """ Returns all JPEG files given a path :param path: """ image_names = [] for f in os.listdir(path): if f.endswith(".jpg"): image_names.append(path + f) return image_names
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import json def make_json(data_dict, simple=None): """Make well formatted JSON for insertion into cascade word docs. JSON will be enclosed by '$ like: '${"key":"value"}$' JSON will be on one line (simple) if it contains only one key/value pair, or if the argument simple==true """ if simp...
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import collections def get_sorted_transitive_dependencies(top, deps_func): """Gets the list of all transitive dependencies in sorted order. There should be no cycles in the dependency graph (crashes if cycles exist). Args: top: A list of the top level nodes deps_func: A function that takes a...
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def r1_p_r2(R1, R2): """ Calculate the Resistance of a parallel connection """ return R1 * R2 / (R1 + R2)
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def enum2str(enumType, enum): """ Translates a pokerth_pb2 enum type to a string. :param enumType: enum type class :param enum: the enum element of the type :return: identifier string of enum """ return [k for k, v in enumType.items() if v == enum][0]
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def get_data_from_context(context): """Get the django paginator data object from the given *context*. The context is a dict-like object. If the context key ``endless`` is not found, a *PaginationError* is raised. """ try: return context['endless'] except KeyError: raise Exception...
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def window_width(g_core: float, t_in: float, t_out: float, g: float, t_r: float, g_r: float) -> float: """ is the calculated winding width if there x g_core - is the distance between the core and the inner winding in [mm] x t_in - is the thickness of the inner winding in [mm] x t_out - is the t...
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import yaml def _parse_top_cfg(content): """Allow top_cfg to be YAML""" try: obj = yaml.safe_load(content) if isinstance(obj, list): return obj except Exception as e: pass return content.splitlines()
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def build_key_name(app_name, os_name, file_name): """ Creates key using app name, os and filename :param app_name: app name :param os_name: OS the app is written for :param filename: the name of the file :return: S3 bucket key for given app/os/filename combination """ return (app_name....
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import re def name_in_string(string: str, name: str) -> bool: """Checks if string contains name. Args: string (str): input searchable string name (str): input name Examples: >>> assert name_in_string("Across the rivers", "chris") >>> assert not name_in_string("Next to a l...
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def filter_boxes(boxes, skip_ts=int(5e5), min_box_diag=60, min_box_side=20): """Filters boxes according to the paper rule. To note: the default represents our threshold when evaluating GEN4 resolution (1280x720) To note: we assume the initial time of the video is always 0 Args: boxes (np.ndar...
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import re def parse_expression(expr, local_data=None): """ Parses a math expression into a list """ i = 0 data = [] while True: if i >= len(expr): break if expr[i] == ' ': i += 1 elif re.search(r'^[\d,.]+', expr[i:]): number = [] ...
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from typing import Dict from typing import List from typing import Set from typing import Tuple def _validate_reply( reply: Dict[str, List[str]], performatives_set: Set[str] ) -> Tuple[bool, str]: """ Evaluate whether the reply structure in a protocol specification is valid. :param reply: Reply struc...
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def get_contrib_read_ids(indexes, reads): """ Takes a set of indexes from assign_reads and the list of read signatures plus the dictionary mapping signatures to aligned read IDs and returns the set of corresponding aligned read IDs (BAM query IDs). """ hap_read_ids = set() for read_idx in in...
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import os def is_mp3(path): """ Determines whether a file looks like an MP3. @param str path The path to the file to check. @return bool True if the file seems like an MP3, False if not. """ if path.startswith('._'): return False if path.lower().endswith('.mp3'): return os.path.isfile(...
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from typing import Optional def _builtin_schema(type_name: str, type_format: Optional[str], event_name: str, datatype: type) -> dict: """ Build type schema for predefined datatypes """ schema = { "type": "object", "required": [ event_name ], ...
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def scs(qs): """ Gets the number of occurrences of each state in qs/each unigram in bis """ ss={} for q in qs: ss[q]=ss.get(q,0)+1 return ss
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import re def simple_sql_parse(data, periscope_type): """Extract table names used in the SQL code using regex Args: data ([type]): [description] periscope_type (str): 'view' or 'chart' Returns: tables_list (array of dict): one table/persicope entity per row """ exp = r...
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def use_autoparal(request): """ This fixture allows to run some of the test both with autoparal True and False """ return request.param
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def default_cost(alignment_matrix, i, j, tokens_1, tokens_2): """ Ignore input and return 1 for all cases (insertion, deletion, substitution) """ return 1
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def summary_stats_from_file(input_file): """ :param input_file: The name of the file that has the information in the next manner: 1) A set of measures names separated by tabulator 2) A undefined number of lines with: classifier name: \t measure_value_0 \t measure_value_1 \t etc. :return: Sum...
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import argparse def get_arguments(): """ gets command line arguments. :return: """ # init parser: parser = argparse.ArgumentParser("Downsample ModelNet40 by category.") # add required and optional groups: required = parser.add_argument_group('Required') optional = parser.add_argument...
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import traceback def get_loan_budget_details(obj): """备用金,费用预算明细 :param obj: :return: """ try: return obj.LoanBudgetDetails.count() except: traceback.print_exc() return 0
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def saved_certificate_to_cnf(file_path): """ Load a certificate from file Parameters ---------- file_path :string Path of the file that contains the certificate fo a cnf Returns ------- set[(string,bool)] The object that represents the loaded...
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def speaking_player(bot, state): """ A player that makes moves at random and tells us about it. """ move = bot.random.choice(bot.legal_positions) bot.say(f"Going {move}.") return move
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def permission_classes(permission_classes): """ Specifies authorization requirements. """ def decorator(func): func.permission = permission_classes return func return decorator
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def trim(d, prepended_msg): """remove the prepended-msg from the keys of dictionary d.""" keys = [x.split(prepended_msg)[1] for x in d.keys()] return {k:v for k,v in zip(keys, d.values())}
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from datetime import datetime def part_of_day() -> str: """Checks the current hour to determine the part of day. Returns: str: Morning, Afternoon, Evening or Night based on time of day. """ am_pm = datetime.now().strftime("%p") current_hour = int(datetime.now().strftime("%I")) ...
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def format_tarball_url(package): """ Creates the url to fetch the tar from github. >>> format_tarball_url({'owner': 'elm-lang', 'project': 'navigation', 'version': '2.0.0'}) 'https://github.com/elm-lang/navigation/archive/2.0.0.tar.gz' """ return "https://github.com/{owner}/{project}/archive/{ve...
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def _GetChartFactory(chart_class, display_class): """Create a factory method for instantiating charts with displays. Returns a method which, when called, will create & return a chart with chart.display already populated. """ def Inner(*args, **kwargs): chart = chart_class(*args, **kwargs) chart.displ...
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import os def listdir(directory, split_ext=False): """Lists directory""" try: if split_ext: return [os.path.splitext(dir_)[0] for dir_ in os.listdir(directory)] else: return os.listdir(directory) except OSError: return []
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def update_vcf_motifs_info(outline, names, varscores, refscores, varht, refht, vargc, refgc, options, chips, col): """ Used in conjunction with update_vcf() to add motifs information to the line. Reduces code maintenance by putting update code in 1 place Args: see update_vcf for definit...
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def generate_big_data(): """ Generate some data. The data=True in the job decorator tells jobflow to store all outputs in the "data" additional store. """ mydata = list(range(1000)) return mydata
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import glob def find_file(path): """ Search file Parameters ---------- path : str Path and/or pattern to find files. Returns ------- str or list of str List of files. """ file_path = glob.glob(path) if len(file_path) == 0: raise ValueError("No such...
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from typing import List def parse_tags(s: str) -> List[str]: """ Parse comma separated tags str into list of tags. >>> parse_tags('one tag') ['one tag'] >>> parse_tags(' strip left and right ends ') ['strip left and right ends'] >>> parse_tags('two, tags') ['two', 'tags'] >>> pa...
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def bfs(initial_state, step_fn, eval_fn, max_depth=None, not_found_value=None): """Bread-first search""" queue2 = [initial_state] states = set(queue2) depth = 0 value = eval_fn(initial_state, depth) if value is not None: return value while queue2 and (max_depth is None or depth <...
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def encipher_kid_rsa(msg, key): """ Here ``msg`` is the plaintext and ``key`` is the public key. Examples ======== >>> from sympy.crypto.crypto import ( ... encipher_kid_rsa, kid_rsa_public_key) >>> msg = 200 >>> a, b, A, B = 3, 4, 5, 6 >>> key = kid_rsa_public_key(a, b, A, B) ...
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def _ansible_verbose(verbose_level=1): """ Return an ansible verbose flag for a given Cliff app verbose level to pass along desired verbosity intent. """ flag = '' if verbose_level > 1: flag = '-{}'.format("v" * (verbose_level - 1)) return flag
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def format_proxies(proxy_host, proxy_port, proxy_user=None, proxy_password=None): """Sets proxy dict for requests.""" PREFIX_HTTP = 'http://' PREFIX_HTTPS = 'https://' proxies = None if proxy_host and proxy_port: if proxy_host.startswith(PREFIX_HTTP): proxy_host = proxy_host[len(...
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import math def neg_exp_distribute(mean_time, U): """ Generate series satisfied negative exponential distribution X = -mean*lnU Parameters: ----------- mean_time: mean time U: a list as a parameter for negative exponential time Return: ------- X: Generated time (interarr...
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def figshare_metadata_readme(figshare_dict: dict) -> dict: """ Function to provide shortened dict for README metadata :param figshare_dict: Figshare API response :return: README metadata based on Figshare response """ readme_dict = {} if 'item' in figshare_dict: print("figshare_m...
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def add_response_tokens_to_option(_option, response_tokens, response_tokens_from_meta): """ :param _option: (delivery_api_client.Model.option.Option) response option :param response_tokens: (list<str>) list of response tokens from decisioning context :param response_tokens_from_meta: (list<str>) list of...
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import os def get_timestamp(trg_dir): """a little function to read a time stamp from a csv file placed in the target directory the last time we backed everything up. Returns None if a timestamp file cannot be found in the source directory, in which case all reports will be copied. Arguments: ...
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def pos_embed(x, position_num): """ get position embedding of x """ maxlen = int(position_num / 2) return max(0, min(x + maxlen, position_num))
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def render_string(s, f, colour, background, antialiasing = True): """ Create pygame.Surface and pygame.Rect objects for a string, using a given font (f) and colour. Parameters: s: the string to render. f: the font in which to render s. colour: the colour of text to use, expr...
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def replace_entities(df, col_name, entity_dict): """ A function to replace values in a Pandas df column given an entity dict, as created in associate_entities() Args: df (DataFrame) : A Pandas DataFrame col_name (string) : A column in the Pandas DataFrame entity_dict (dict) : A dic...
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from typing import List def clean_strings(string_list: List[str]) -> List[str]: """ Clean up a list of strings ready to be cast to numbers. """ clean_string = [] for string in string_list: new_string = string.strip() clean_string.append(new_string.strip(",")) return clean_strin...
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def vertical_path(size): """ Creates a generator for progressing vertically through an image. :param size: A tuple (width, height) of the image size :return: A generator that yields a set of columns through the image. Each column is a generator that yields pixel coordinates. """ width, heigh...
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def getProperties(object) : """ Extracts and returns properties of an object from the FBX tree. """ dict = {} Prop70 = object.find("Properties70") if Prop70 != None : allProp = Prop70.findall("P") for prop in allProp : allinfo = prop.text.split(",") for info in allinfo : dict[allinfo[0]] = [info.str...
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from unittest.mock import patch def patch_init_modem(): """Mock modem.""" return patch( "homeassistant.components.modem_callerid.PhoneModem.initialize", )
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def hourly_info(x): """ separates the hour from time stamp. Returns hour of time. """ n1 = x.hour return n1
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from typing import List import shlex def bash_and_fish_remove_path(value: List[str]) -> str: """Renders the code to remove directories from the path in bash and fish. :param value: A list of values to prepend to the path. :return: The code to prepend to path. """ return "\n".join(f"remove_path {s...
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def binary_encoder_decoder(obj): """ Assumes value is already in binary format, so passes unchanged. """ return obj
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def _find_max_power(grid, size): """Find the maximum power in the grid for a given size.""" size -= 1 max_power = grid[size][size] max_coords = (1, 1) for coord_x in range(300 - size): for coord_y in range(300 - size): power = grid[coord_x + size][coord_y + size] if...
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def retrieve_usernames(list_of_ids, dict_of_ids_to_names): """ For retrieving usernames when we've already gotten them from twitter. For saving on API requests """ usernames = [] for user_id in list_of_ids: usernames.append(dict_of_ids_to_names[user_id]) return usernames
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def create_search_criterion_by_date(datetime, relative=None, sent=False): """Return a search criteria by date. .. versionadded:: 0.4 :param relative: Can be one of 'BEFORE', 'SINCE', 'ON'. :param sent: Search after "sent" date instead of "received" date. """ if relative not in ['BEFORE', 'ON',...
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def read_config(filename): """read the config file and return a dict""" try: with open(filename, 'r') as conf_file: lines = conf_file.readlines() token: str procd = dict([[token.strip() for token in line.split("=")] for line in lines]) return procd exc...
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def get_cleaned_string(string): """ Return ``string`` removing unnecessary special character """ if string: for replaceable in ("'", '"', '{', '}', '[', ']', '%q', '<', '>', '.freeze'): string = string.replace(replaceable, '') return string.strip()
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def setitimer(which, seconds, interval=0): """Sets given interval timer (one of :const:`signal.ITIMER_REAL`, :const:`signal.ITIMER_VIRTUAL` or :const:`signal.ITIMER_PROF`) specified by *which* to fire after *seconds* (float is accepted, different from :func:`alarm`) and after that every *interv...
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import os def same_partition(f1, f2): """Returns True if both files or directories are on the same partition """ return os.stat(f1).st_dev == os.stat(f2).st_dev
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def evaluate(f, x ,y): """Uses a function f that evaluates x and y""" return f(x, y)
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def withattr(**kwg): """ Set attributes to a func, example: >>> Class Model(DjangoModel): ... @withattr(alters_data=True) ... def delete(self): ... delete(self) :param kwg: attributes dict """ def foo(func): for name, value in list(kwg.items()): s...
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def pyimpl_universe_setitem(universe, handle, value): """Implement `universe_setitem`.""" return universe.set(handle, value)
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def test_fetch_doc_by_id(client, db, _id): """Test document fetch by Id.""" try: response = client.get_document( db=db, doc_id=_id ).get_result() if "error" in response: raise ValueError(f'Document with id {_id} not found') else: p...
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import copy def filter_date_in_range(phase_dates, starttime, endtime): """ Exclude phases date outside range, and handle its date boundary. """ phases = copy.deepcopy(phase_dates) for item in phases: if not (item[0] >= starttime and item[0] < endtime): item[0] = None if...
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import logging def final_policy(policy_network, policy_params, alpha, x): """Rollout the final policy.""" logging.info("jit-ing final_policy") n_policies = len(policy_params) prefactor = alpha / (1 - ((1 - alpha)**n_policies)) def weighted_policy(k, params): return prefactor * ( (1 - alpha)**(n...
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def _common_gpipe_transformer_params(p): """Add GPipe params to layer.""" p.Define( 'is_transparent', False, 'If set, encoder outputs a list of layer outputs while decoder ' 'expects a list of source input vectors.') p.Define( 'num_transparent_outputs', 0, 'Number of transparent outp...
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def calculate_consonant_magnification(velocity): """子音速度を倍率に変換する。 """ return 2 ** ((100 - velocity) / 100)
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def compare(initial, candidate): """ Compares two shingles sequence and returns similarity value. :param initial: initial sentence shingles sequence :param candidate: compared sentence shingles sequence :return: similarity value """ matches = 0 for shingle in initial: if shingle ...
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def field_to_int(field): """ Return an integer representation. If a "-" was provided return zero. """ if field == "-": return 0 return int(field)
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def stress_model(strain, modulus): """ Returns the linear estimate of the stress-strain curve using the strain and estimated modulus. Used for fitting data with scipy. Parameters ---------- strain : array-like The array of experimental strain values, unitless (or with cancelled ...
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def vdiv_scalar(vector, scalar): """ div vectors """ return (vector[0] / scalar, vector[1] / scalar)
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import time def time_current(): """Returns the number of second since the epoch.""" return int(time.time())
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from typing import List def get_requirements() -> List[str]: """read the contents of the requirements file""" with open('requirements.txt', encoding='utf-8') as f: return [line.replace('==', '>=') for line in f.readlines()]
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from numpy import zeros, where def calc_13_category_usda_soil_type(clay, sand, silt): """Calculate the 13 category usda soil type from the clay sand and silt 0 -- WATER 1 -- SAND 2 -- LOAMY SAND 3 -- SANDY LOAM 4 -- SILT LOAM 5 -- SILT 6 -- LOAM 7 -- SANDY CLAY LOAM 8 -- SILTY...
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def mapping_ids_dicts(unique_ids, filtered_align_df_positive): """ makes dict from ids mapping to one another meeting criteria set above """ ids_dict = {} for i in unique_ids: ids_dict[i] = [] ids_dict[i].append(filtered_align_df_positive[filtered_align_df_positive[0] == i][2].t...
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import pickle def load_dictionary(file_path): """ Loads a categorical variable dictionary that was saved in pickle format. """ with open(file_path, "rb") as dictionary_file: return pickle.load(dictionary_file)
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def evaluate(predictions): """ Calculates scores for the predictions""" legit_predictions , spam_predictions = predictions true_legit = legit_predictions.count("legit") # count true legit predictions false_legit = spam_predictions.count("legit") # count false legit predictions true_spam = ...
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import math def p_largest_prime_factor(num : int, start : int, largest : int) -> int: """Find the largest prime factor of an odd number""" if largest * largest > num: return num lim = int(math.sqrt(num)) + 1 for i in range(start, lim, 2): if num % i == 0: largest = i ...
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def getRawName(path): """ Given a filename with no path before it, returns just the name, no type :returns filename """ loc = path.rfind(".") if loc == -1: return loc else: return path[0:loc]
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def filter_index(collection, predicate=None, index=None): """ Filter collection with predicate function and index. If index is not found, returns None. :param collection: :type collection: collection supporting iteration and slicing :param predicate: function to filter the collection with :...
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from pathlib import Path def load_html(filename): """ Load HTML from file """ return Path(filename).read_text()
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