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def remove_dul(entitylst): """ Remove duplicate entities in one sequence. """ entitylst = [tuple(entity) for entity in entitylst] entitylst = set(entitylst) entitylst = [list(entity) for entity in entitylst] return entitylst
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import argparse import ast def add_dannce_train_args( parser: argparse.ArgumentParser, ) -> argparse.ArgumentParser: """Add arguments specific to dannce training. Args: parser (argparse.ArgumentParser): Command line argument parser. Returns: argparse.ArgumentParser: Parser with added...
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import re def _is_disabled(name, disabled=[]): """Test whether the package is disabled. """ for pattern in disabled: if name == pattern: return True if re.compile(pattern).match(name) is not None: return True return False
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def _get_elements_and_boundaries(flows): """filter out elements and boundaries not used in this TM""" elements = {} boundaries = {} for e in flows: elements[e] = True elements[e.source] = True elements[e.sink] = True if e.source.inBoundary is not None: boundar...
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def get_wind(bearing): """get wind direction""" if (bearing <= 22.5) or (bearing > 337.5): bearing = u'\u2193 N' elif (bearing > 22.5) and (bearing <= 67.5): bearing = u'\u2199 NE' elif (bearing > 67.5) and (bearing <= 112.5): bearing = u'\u2190 E' elif (bearing > 112.5) and...
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def response(hey_bob): """ Get the response """ if not hey_bob.strip(): return "Fine. Be that way!" chars = "".join(filter(lambda c: c.isalpha(), hey_bob)) if hey_bob.strip()[-1] == "?": if chars.isupper(): return "Calm down, I know what I'm doing!" return...
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def configure(config): """ | [google] | example | purpose | | -------- | ------- | ------- | | cs_id | 00436473455324133526:ndsakghasd | Custom search ID | | api_key | ASkdasfn3k259283askdhSAT5OADOAKjbh | Custom search API key | """ chunk = '' if config.option('Configuring google search ...
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def a_source_filename(plugin_ctx, fsm_ctx): """send source filename.""" src_file = plugin_ctx.src_file fsm_ctx.ctrl.sendline(src_file) return True
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import binascii def givenCodeGetGPML(s, code): """download gpml files from wikipathways database""" code = code.decode() res = s.getPathwayAs(code, filetype="gpml") # newres = unidecode(res) newres = binascii.a2b_base64(bytes(res, "ascii")) # convert to ascii return newres
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def velocity(range, avg_range, volume, avg_volume): """ The average of the average of the range and volume for a period. :param range: :param avg_range: :param volume: :param avg_volume: :return: """ rng_rate = range / avg_range vol_rate = volume / avg_volume total = sum((rng...
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import os import glob import pyclbr import importlib def model_finder(game_mode): """ Returns an initialized model. :param game_mode: str Should be either the name of a module located in the models folder or the name of the first class inside one of the modules located...
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import re def seperate_data(data, labels): """ Given a data file such as | x11 u11 x12 other x13 | | x21 u21 x22 other x23 | | ..................... | And labels for each column such as 'x' 'u' 'x' '_' 'x' Split the data into x' and u' """ # Take the i...
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def hr2deg(deg): """Convert degrees into hours.""" return (deg * (24.0 / 360.0))
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import os def is_model_dir(model_dir): """Checks if the given directory contains a model and can be safely removed. specifically checks if the directory has no subdirectories and if all files have an appropriate ending.""" allowed_extensions = {".json", ".pkl", ".dat"} dir_tree = list(os.walk(mod...
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import os def create_dir_and_make_writable(directory): """ Creates a directory if it does not exist, and make sure it is writable by us. @rtype: bool @return: success """ if not os.path.exists(directory): try: os.makedirs(directory) except OSError: retur...
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def main(): """Для того, чтобы сделать на сайте «звонибельную» ссылку, надо указать параметр href c префиксом tel: Например, <a href="tel:+79012342452">+79012342452</a> Напишите программу, которая «оборачивает» телефон в такие теги.""" # Code goes over here. tel = input() print('<a href="tel...
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import itertools def check_all_hats(s0, s1, s2, s3, verbose=False): """s0~3 = 3x3 strategy for that player""" successes = 0 for hats in itertools.product(range(3), repeat=4): guesses = [s0[hats[3]][hats[1]], s1[hats[0]][hats[2]], s2[hats[1]][hats[3]], ...
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from typing import Union import time def cast_timestamp_seconds_since_epoch_to_text(seconds: Union[int, float, str], timezone: str = "UTC", time_in_nanoseconds: bool = False, da...
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def to_lower( tokens ): """Convert all tokens to lower case. Args: tokens (list): List of tokens generated using a tokenizer. Returns: list: List of all tokens converted to lowercase. """ return [w.lower() for w in tokens]
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import re def has_three_consecutive_vowels(word): """Returns True if word has at least 3 consecutive vowels""" pattern = re.compile(r"[aAeEiIoOuU]{3,}") match = pattern.search(word) return True if match else False
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import re def wrap_parser(namespace, parser): # pragma: no cover """Wraps an argument parser, putting all following options under a namespace. """ robj = re.compile(r'^(-+)') class _Wrapper: def __init__(self, _parser): self.parser = _parser def add_argument(self, *args,...
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def even_control_policy(time): """Policy carrying out evenly distributed disease management.""" return [0.16]*6
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def rotc(ebit, debt, equity): """Computes return on total capital. Parameters ---------- ebit : int or float Earnins before interest and taxes debt : int or float Short- and long-term debt equity : int or float Equity Returns ------- out : int or float ...
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def is_final_option(string): """Whether that string means there will be no further options >>> is_final_option('--') True """ return string == '--'
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def traverse_dict(obj: dict, convert_to_string: bool = True): """ Traversal implementation which recursively visits each node in a dict. We modify this function so that at the lowest hierarchy, we convert the element to a string. From https://nvie.com/posts/modifying-deeply-nested-structures/ "...
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def squash_dims(tensor, dims): """ Squashes dimension, given in dims into one, which equals to product of given. Args: tensor (Tensor): input tensor dims: dimensions over which tensor should be squashed """ assert len(dims) >= 2, "Expected two or more dims to be squashed" size...
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import re def is_a_uri(uri_candidate): """ Validates a string as a URI :param uri_candidate: string :return: True or False """ # https://gist.github.com/dperini/729294 URL_REGEX = re.compile( "^" # protocol identifier "(?:(?:https?|ftp)://)" # user:pass aut...
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def update_config(config,config_update): """Update config with new keys. This only does key checking at a single layer of depth, but can accommodate dictionary assignment :config: Configuration :config_update: Updates to configuration :returns: config """ for key, value in config_updat...
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def transform_post(post): """Transforms post data Arguments: post {dict} -- Post data """ return { 'id': post['id'], 'title': post['title'], 'url': post['url'], 'image': post['feature_image'], 'summary': post['custom_excerpt'] \ if post['c...
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def int_to_unknown_bytes(num, byteorder='big'): """Converts an int to the least number of bytes as possible.""" return num.to_bytes((num.bit_length() + 7) // 8 or 1, byteorder)
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def add_color_esc_codes(text: str, c: int) -> str: """Surround string with escape color code and """ cnum = 16 base = 30 if c < cnum / 2 else 90 color_code = f'\033[0;{base + c % 8};40m' reset_code = '\033[0m' return f'{color_code}{text}{reset_code}'
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def min_operations(number): """ Return number of steps taken to reach a target number number: target number (as an integer) :returns: number of steps (as an integer) """ # Solution: # 1. The number of steps to reach a target number = number of steps take to make the target number 0 # 2....
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import ipaddress def validate_ipv4_address(ipv4_address): """ This function will validate if the provided string is a valid IPv4 address :param ipv4_address: string with the IPv4 address :return: true/false """ try: ipaddress.ip_address(ipv4_address) return True except: ...
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def flatten(some_list): """ Flatten a list of lists. Usage: flatten([[list a], [list b], ...]) Output: [elements of list a, elements of list b] """ new_list = [] for sub_list in some_list: new_list += sub_list return new_list
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def flood_fill(surface, seed_point, color, pan=(0, 0)): """Flood fills a pygame surface, starting off at specific seed point. Returns the original surface with that area filled in. Thanks to wonderfully concise example of (non-recursive) flood-fill algorithm in Python: http://stackoverf...
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def bbox_to_pixel_offsets(gt, bbox): """Helper function for zonal_stats(). Modified from: https://gist.github.com/perrygeo/5667173 Original code copyright 2013 Matthew Perry """ originX = gt[0] originY = gt[3] pixel_width = gt[1] pixel_height = gt[5] x1 = int((bbox[0] - originX) / ...
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def autocomplete(prefix, structure, algorithm='linear_search'): """Return all vocabulary entries that start with the given prefix using the given structure and algorithm, specified as linear_search, trie, etc.""" if algorithm == 'linear_search': # Search the list using linear search return [...
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from typing import Any from typing import Set def _all_names_on_object(obj: Any) -> Set[str]: """Gets all names of attributes on `obj` and its classes throughout MRO. Args: obj: The object to get names for. Returns: A set of names of attributes of `obj` and its classes. """ nameset = set(obj.__dict...
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import ipaddress import re def _validate_cidr_format(cidr): """Validate CIDR IP range :param str cidr: :return: :rtype: bool """ try: ipaddress.ip_network(cidr, strict=False) except (ValueError, ipaddress.AddressValueError, ipaddress.NetmaskValueError): return F...
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import requests def rx_id_from_up_id(up_id): """Get the Reactome Stable ID for a given Uniprot ID.""" react_search_url = 'http://www.reactome.org/ContentService/search/query' params = {'query': up_id, 'cluster': 'true', 'species':'Homo sapiens'} headers = {'Accept': 'application/json'} res = reque...
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from typing import List from typing import Callable from typing import Tuple def evolve_until_stationary(layout: List[str], change_rule: Callable[[str, int], str], floor_is_empty: bool = True) -> List[str]: """Evolves *layout* applying *change_rule* to each position, until no more changes are made. *floor_is...
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def _convert_path_to_ee_sources(path: str) -> str: """Get the remote module path from the 'ee-sources' GCS bucket. Args: path: str Returns: An ee-sources module url. """ if path.startswith("http"): eempath = path else: bpath = path.replace(":", "/") eemp...
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import pytz def convert_utc_to_localtime(utc_datetime, timezone_str): """ 轉換 utc 時間為指定的 local 時間,如果輸入的時區有錯,則保持原來的 UTC Args: utc_datetime(datetime): utc 時間 timezone(str): 指定轉換的時區,採用 tz database 列表 Returns timezone_dt(datetime): 回傳轉換好的時區時間 """ # 取得 tzinfo 的時區 if timezone_str in pytz.common_timezones: tz ...
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def get_number(char): """ 判断字符串中,中文的个数 :param char: 字符串 :return: """ count = 0 for item in char: if 0x4E00 <= ord(item) <= 0x9FA5: count += 1 return count
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import functools import operator def prod(iterable): """Product function. Parameters ---------- iterable """ return functools.reduce(operator.mul, iterable, 1)
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import subprocess def get_git_branch(): """Get the symbolic name for the current git branch.""" cmd = "git rev-parse --abbrev-ref HEAD".split() try: output = subprocess.check_output(cmd, stderr=subprocess.STDOUT) except subprocess.CalledProcessError: return None else: retur...
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import os def screenshot_data(): """Loads base64-encoded screenshot data. """ try: file = open(os.path.join("tests/fixtures/screenshot_base64.txt"), 'r') data = file.read() except FileNotFoundError: return '' else: file.close() return data
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def reverse_amount(amount, account): """ get counterparty amount :param amount: :param account: :return: {{value: string, currency: *, issuer: *}} """ return { 'value': str(-float(amount['value'])), 'currency': amount['currency'], 'issuer': account } pass
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import collections def list_compare(a: list, b: list) -> bool: """Check if two lists contain the same elements.""" return collections.Counter(a) == collections.Counter(b)
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def time_int_to_decimal(time): """Takes a number of the form HHMMSS or +/-DDMMSS and converts it to a decimal.""" if time[0] == "-": sign = -1 timestr = time[1:] elif time[0] == "+": sign = 1 timestr = time[1:] else: sign = 1 timestr = time index = timestr.find('.') if index > -1: ...
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def _get_map_key(wire_position): """ wire position, tuple of tuple like: ((0, 0), (0, 1)) """ if wire_position[0][0] + wire_position[0][1] > \ wire_position[1][0] + wire_position[1][1]: return str((wire_position[1], wire_position[0])) return str(wire_position)
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import collections def find_best_kmer_diagonal(kmertoposA, kmertoposB, bandwidth, ignore_self_diagonal=False): """To approximate the best alignment between sequences A and B, find the highest number of basepairs in sequence A involved in kmer matches within a single diagonal band in an A-to-B alignment. ...
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def copper_heat_capacity_CRC(T): """ Copper specific heat capacity as a function of the temperature from [1]. References ---------- .. [1] William M. Haynes (Ed.). "CRC handbook of chemistry and physics". CRC Press (2014). Parameters ---------- T: :class:`pybamm.Symbol` Dime...
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import re def n_channels(s): """Get the number of channels from filename""" temp = re.split("_|\.", s.lower()) if "C64" in temp: return 64 return 32
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def getAttributeValue(Data, Attribute, IsDiscrete): """ 统计所有离散属性的所有取值。 Args: Data (): 数据集 Attribute (): 属性集 IsDiscrete (): 是否离散 Returns: 字典,所有离散属性的所有取值。例如: {'色泽': {'乌黑', '青绿', '浅白'}, '根蒂': {'硬挺', '稍蜷', '蜷缩'}, '敲声': {'浊响', '沉闷', '清脆'}, '纹理': {'模糊', '清晰', '稍糊'}, '脐部': {'凹...
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def _compute_all_mask(ds): """Computes a mask that is true everywhere""" da_mask = ds.z < ds.z + 1 da_mask.attrs["long_name"] = "All data mask" return da_mask
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def merge_dict(destination, source, path=None): """merges source into destination""" if path is None: path = [] for key in source: if key in destination: if isinstance(destination[key], dict) and isinstance(source[key], dict): merge_dict(destination[key], source[key], path + [str(key)]) ...
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def traverse_for_weight(network, parent, stop_concept, previous_concepts=None, previous_weights=None): """Find all the weights between two concepts in a network. Returns a list of lists. Each inner list represents a path within the network. The items of the list are the weights for the path. """ if...
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def _convert_hab_op(lulc_array, *hab_conversion_list): """Convert lulc to odd value if even value of hab conversion is 1.""" result = lulc_array.copy() hab_iter = iter(hab_conversion_list) for mask_array, conversion in zip(hab_iter, hab_iter): if isinstance(conversion, int): result[m...
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import logging def obr_repr(obj): """Return obj representation if possible.""" try: return repr(obj) # pylint: disable-msg=broad-except except Exception as e: logging.error(e) return 'String Representation not found'
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def generate_playlist_url(playlist_id:str)->str: """Takes playlist Id and generates the playlist url example https://www.youtube.com/playlist?list=PLGhvWnPsCr59gKqzqmUQrSNwl484NPvQY """ return f'https://www.youtube.com/playlist?list={playlist_id}'
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import time def getNewId(Tag): """Build a new Id""" t1 = time.time() sid = str(Tag) + '_' + str(t1) return sid
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import torch def correct_predictions(predictions, targets): """ :param predictions: input of predicted values. size should be WxC :param targets: input of target values. size should be W :return: total number pf correct predictions """ # calculate correct predictions over each batch correc...
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from typing import Optional import base64 import os def make_gafaelfawr_token(username: Optional[str] = None) -> str: """Create a random or user Gafaelfawr token. If a username is given, embed the username in the key portion of the token so that we can extract it later. This means the token no longer fo...
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def get_file_list(num_files): """ formats number of files in olympus format :param num_files: :return: list of file numbers """ file_list = [] for num in range(1, num_files+1): num = str(num) to_add = 4-len(num) final = '0'*to_add+num file_list.append(final) ...
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def _binary_search(f, xmin, xmax, eps=1e-9): """Return the largest x such f(x) is True.""" middle = (xmax + xmin) / 2. while xmax - xmin > eps: assert xmin < xmax middle = (xmax + xmin) / 2. if f(xmax): return xmax if not f(xmin): return xmin i...
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def int_check(self, value, key): """ Cast a value as an integer :param value: The value to cast as int :param key: The value name :return: The value as an integer, otherwise an error message """ try: int(value) return int(value), '' except: return None, 'Error: %...
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def get_organizer_emails(form): """Get up to 15 organizer emails from an input form.""" return form.getlist("organizer")[:15]
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def find_dependency_in_spec(spec, ref): """Utility to return the dict corresponding to the given ref in a dependency build spec document fragment """ for item in spec: if item['ref'] == ref: return item
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import json def get_json_dump(data): """ get dump of data as JSON """ return json.dumps(data, indent=4, separators=(',', ': '))
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def lerp(pos_x, x0, x1, fx0, fx1): """ integer linear interpolation """ return fx0 + (fx1 - fx0) * (pos_x - x0) // (x1 - x0)
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def encoding(fields, use_original_field_names=False): """Convert fields structure to encoding maps for values and field names. Expects a fields dictionary structure, returns a tuple of two dictionaries where the keys are the field names (either original or new depending on the use_original_field_names param...
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import torch import logging def compute_ious(gt_masks, pred_masks, gt_boxes, pred_boxes): """Compute Intersection over Union of ground truth and predicted masks. Args: gt_masks (torch.IntTensor((img_height, img_width, nb_gt_masks))): Ground truth masks. pred_masks (torch.FloatTens...
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def getMatches(file, regex): """ Returns a list of all passages in `file` matching `regex` """ source = open(file, "r") return [x for x in regex.findall(source.read())]
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def qualitytodeg(ql): """ Maps a string to a distance in degree between the outer points of the cylinder => Lower distance = more points generated @:param ql String which represents choosen quality of the stl file @:return int which represents the distance between outer points of the cylinder sides...
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from typing import Tuple def ext_gcd(a: int, b: int) -> Tuple[int, int, int]: """Extended Euclidean algorithm solve ax + by = gcd(a, b) Parameters ---------- a b Returns ------- (d, x, y) s.t. ax + by = gcd(a, b) """ if b == 0: return a, 1, 0 d, y, x = e...
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def resolve_path(base, path): """ Resolve (some) relative path. """ if path[0] == "/": # Absolute path return path return base + path
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def parse_zone_id(full_zone_id: str) -> str: """Parse the returned hosted zone id and returns only the ID itself.""" return full_zone_id.split("/")[2]
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def _real_name(name, finfo): """Given the name of an object, return the full name (including package) from where it is actually defined. """ while True: parts = name.rsplit('.', 1) if len(parts) > 1: if parts[0] in finfo: trans = finfo[parts[0]].localnames.get...
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import math def distance(A, B): """ Finds the distance between two points @parameter A: point #1 @parameter B: point #2 @returns: distance between the points A and B""" return math.sqrt((A[0] - B[0]) ** 2 + (A[1] - B[1]) ** 2)
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from collections import Counter def CheckPermutation(string1, string2): """Check permutation of two string""" counter = Counter() if len(string1) != len(string2): return False for x in string1: counter[x] += 1 for x in string2: counter[x] -= 1 for x in counter: if counter[x]!=0: return False return...
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def decimalToBinaryv1(decimal): """assumes decimal is an int, representing a number in base 10 returns an int, representing the same number in base 2 """ return bin(decimal)
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def _create_pred_input_plot(x_pred, x_pred_error, axes, vline_kwargs=None, vspan_kwargs=None): """Create plot for prediction input data (vertical lines).""" if vline_kwargs is None: vline_kwar...
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def get_results(soup): """ Gets the results div from the HTML soup @param {BeautifulSoup} soup Google Scholar BeautifulSoup instance @return {BeautifulSoup[]} List of Google Scholar results as BeautifulSoup instances """ return soup.find_all('div', class_='gs_r gs_or gs_scl')
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def del_pre_line(text, keyword): """ 删除上一行 :param text: :param keyword: :return: str: 删除行之后的结果 """ position = text.find(keyword) if position != -1: pos_line_head = text.rfind('\n', 0, position) pos_pre_line_head = text.rfind('\n', 0, pos_line_head) return text[0:p...
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import argparse def parse_arguments(): """ Parse user arguments Output: list with all the user arguments """ # All the docstrings are very provisional and some of them are old, they would be changed in further steps!! parser = argparse.ArgumentParser(description="""Script ...
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def has_ordered_sublist(lst, sublist): """ Determines whether the passed list contains, in the specified order, all the elements in sublist. """ sub_idx = 0 max_idx = len(sublist) - 1 for x in lst: if x == sublist[sub_idx]: sub_idx += 1 if sub_idx > max_idx: ...
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def mock_time(dt=None, mem=[0.0]): """Fake time.perf_counter().""" if dt is not None: mem[0] += dt return mem[0]
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def detecttermination(logfile): """ Query whether or not a process with the given process id is still running and return true or false. """ # Open longbow log file and detect if the final "goodbye" lines is there. try: fi = open(logfile) lines = fi.readlines() if len...
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import argparse import pathlib def parse_args(): """Parse command line arguments. Returns: output (argparse.Namespace): Parsed command line arguments. See executable help page for more information. """ parser = argparse.ArgumentParser() parser.add_argument("--backgrounds", ...
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def filter_quote(environment, text, quote='"', escape_with='\\', newline=None): """ Filter to add quotes to text. This is a naive implementation, as the specifics can vary a lot depending on where you are writing the text. :param str text: Text to adds quotes to. :return: The text quoted out,...
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import struct def f2b(f): """ float to 32bit int """ return struct.unpack('I', struct.pack('f', f))[0]
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import os def default_lv2_path(conf): """Return the default LV2_PATH for the build target as a list""" if conf.env.DEST_OS == 'darwin': return ['~/Library/Audio/Plug-Ins/LV2', '~/.lv2', '/usr/local/lib/lv2', '/usr/lib/lv2', '/Library/Audi...
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def accept(potList): """ return True if current structure meets acceptance criteria """ if potList['noe'].violations()>1: return False if potList['CDIH'].violations()>0: return False if potList['BOND'].violations()>0: return False if potList['ANGL'].violations()>0: ...
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from typing import List from typing import Tuple from typing import Dict def convert(day_input: List[str]) -> Tuple[Dict[str, List[range]], List[int], List[List[int]]]: """Converts the input into a tuple with: 1. A dictionary with the fields, where for each field the value is a list of the valid ranges, e...
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import requests def refine_urn(urns, metadata=None): """Refine a list urns using extra information""" if metadata is None: metadata = {} metadata['urns'] = urns if not ('words' in metadata): metadata['words'] = [] if not ('next' in metadata or 'neste' in metadata): metadata...
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def sample_approx(approx, draws=100, include_transformed=True): """Draw samples from variational posterior. Parameters ---------- approx: :class:`Approximation` Approximation to sample from draws: `int` Number of random samples. include_transformed: `bool` If True, trans...
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import os def load_cksm(sumfile, base_filename): """Load the checksum from a file""" for l in open(sumfile,'r'): if os.path.basename(base_filename) in l: sum_cksm, name = l.strip('\n').split() return sum_cksm raise Exception('could not find checksum in file')
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def find_hosts(ipa_client, pattern=None): """ Returns list of matching hosts from IPA. If no pattern is provided, returns all hosts. """ if pattern is None: pattern = '' return ipa_client.get_hosts( pattern=pattern )
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import os def dir_path(string): """ Determine if string is a valid directory path """ if os.path.isdir(string): return string else: raise NotADirectoryError(string) # warnings.warn( # f"{textstyle.WARNING}{string} is not a valid directory, path will be defaulted...
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