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def unpack_vlq(data): """Return the first VLQ number and byte offset from a list of bytes.""" offset = 0 value = 0 while True: tmp = data[offset] value = (value << 7) | (tmp & 0x7f) offset += 1 if tmp & 0x80 == 0: break return value, offset
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import time import socket def wait_for_service(host, port, timeout): """Waits for a service to start listening on a port. Args: host: Hostname where the service is hosted. port: Port where the service is expected to bind. timeout: Time in secs to wait for the service to be available. ...
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def policy_to_mitigation(s): """ We have defined suppression as 1=unmitigated. For display we usually want mitigated = (1 - suppression). This converts that string repr. Parameters ---------- s: str String to convert. Structure is e.g. suppression_policy__1.0 Returns ------- ...
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from typing import Tuple def rect_area(a: Tuple[int, int, int, int]) -> int: """helper function for calculate rectangle area Args: a: <List[int]> rectangle Returns: <int> calculated rectangle area """ return a[2] * a[3]
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def cleanup_uri(uri): """remove angle brackets from a URI, if any""" if uri.startswith('<') and uri.endswith('>'): return uri[1:-1] return uri
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def ndims(x): """ Return the ndims of a tensor. """ return len(x.shape)
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def normal_percentile_to_label(percentile): """ Assigns a descriptive term to the MMSE percentile score. """ if percentile >= 98: return 'Exceptionally High' elif 91 <= percentile <= 97: return 'Above Average' elif 75 <= percentile <= 90: return 'High Average' elif 25...
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def total_seconds(delta): """Determines total seconds with python < 2.7 compat.""" # http://stackoverflow.com/questions/3694835/python-2-6-5-divide-timedelta-with-timedelta return (delta.microseconds + (delta.seconds + delta.days * 24 * 3600) * 1e6) / 1e6
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def determine_duration_and_scale_factor_from_parameters(chirp_mass): """Determine appropriate duration and roq scale factor from chirp mass Parameters ---------- chirp_mass: float The chirp mass of the source (in solar masses) Returns ------- duration: int roq_scale_factor: flo...
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import mpmath def sf(x, mu=0, sigma=1): """ Log-normal distribution survival function. """ if x <= 0: return mpmath.mp.one lnx = mpmath.log(x) return mpmath.ncdf(-lnx, -mu, sigma)
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def draw(cards, deck): """ draws a single card and adds it to hand :param cards: :return: cards + one card """ cards += (deck.pop(),) return cards
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from typing import Tuple def _split_sampling_rate_byte_11_2(sampling_rate_byte: int) -> Tuple[int, int]: """Separate sampling rate into its own byte.""" return sampling_rate_byte & 0x0F, sampling_rate_byte & 0xF0
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def listToCol(lst): """ Converts list to column vector """ return [[item] for item in lst]
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def dimension_to_bounds(x, y, width, height): """ Convert a positioned rectangular section into a bounding box coordinates indicating the top left and bottom right. :param x: x position or rectangular section :param y: y position or rectangular section :param width: width of section :param ...
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import binascii def is_gz_file(file_path: str): """ Tests to see if a file is gzipped or not. This was taken from https://stackoverflow.com/questions/3703276/how-to-tell-if-a-file-is-gzip-compressed Returns ------- True if it is gzipped, False otherwise. """ with open(file_path, 'rb')...
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def Lobify (data,group,formants): """ Applies Lobanov (z-score) normalization to vowels according to a grouping variable Adds a column to original dataframe for each formant, with zsc prefixed to the formant name -- Required parameters: data = dataframe containing data to transform ...
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def dfunc(variable_x): """ 目标函数一阶导数也即是偏导数实现 args: variable_x: 目标函数 return: 2 * variable_x: 目标函数一阶导数 """ return 2 * variable_x
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import re def remove_trailing_spaces(code): """ Removes spaces from end of lines. For example, remove_trailing_spaces('hello \nworld \n') -> 'hello\nworld\n'. """ return re.sub(' +$', '', code, flags=re.MULTILINE)
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def get_cities() -> list: """ Open Craigslist cities from text Args: None Return: list """ results = [] with open('src/craigslist_cities.txt', 'r', encoding='utf8') as file: for line in file: results.append(line.strip()) return results
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def wpcsys(self, wn="", kcn="", **kwargs): """Defines the working plane location based on a coordinate system. APDL Command: WPCSYS Parameters ---------- wn Window number whose viewing direction will be modified to be normal to the working plane (defaults to 1). If WN is a negativ...
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import socket import errno def checksocketfamily(name, port=20058): """return true if we can listen on localhost using family=name name should be either 'AF_INET', or 'AF_INET6'. port being used is okay - EADDRINUSE is considered as successful. """ family = getattr(socket, name, None) if fami...
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def mean(feature_vector): """ :param feature_vector: List of integer/float/double.. :return: Mean of the feature vector. """ return sum(f for f in feature_vector)/len(feature_vector)
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def dict_removeSafe(dict, key): """Tries to remove `key`. If there is no `key`, ignore""" if (not key in dict): return None return dict.pop (key)
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def bytedata(a): """Return a the raw data corresponding to a.""" if isinstance(a, (bytearray, bytes, memoryview)): return a elif hasattr(a, "data"): return a.data else: raise ValueError(a, "cannot return bytedata")
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def kib_to_gib(size: float) -> float: """Convert disk space unit from KiB to GiB.""" return round(size / 2 ** 20, 2)
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def get_attr_cols(df, non_attr_cols): """ :param df: A data frame of model results :param non_attr_cols: Names of columns not associated with attributes :return: List of columns associated with sample attributes """ # index of the columns that are associated with attributes attr_cols = df.co...
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def quaternion_conjugate(q): """ Computes quaternion conjugate :param q: Quaternion :return: """ return [q[0], -q[1], -q[2], -q[3]]
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def _cbrange_user_defined(cbrange, cbrange_user): """Set user-specified colorbar range. Parameters: cbrange (list): Input colorbar range. cbrange_user (list): User-specified colorbar range. If a value is None, then use the previous value. Returns: ...
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def _is_overlap(i, j, used_spans): """ Returns whether the span (i, j) overlaps with the interval(s) described by the items in `used_spans` """ minval = min([i] + [s[0] for s in used_spans]) # smallest start index among spans maxval = max([j] + [s[1] for s in used_spans]) # largest end index among...
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import math def distance(x1, y1, x2, y2): """ Given two ordered pairs calculate the distance between them. Round to two decimal places. """ return round(math.sqrt(math.pow(x2 - x1, 2) + math.pow(y2 - y1, 2) * 1.0),2)
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def clamp(number: int, max_value: int, min_value: int) -> int: """ Clamp value into a range """ return max(min(number, max_value), min_value)
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def get_year_filename(file): """Get the year from the datestr part of a file.""" date_parts = [int(d) for d in file.split('.')[-2].split('-')] return date_parts[0]
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def format_bytes(count): """ Format bytes in human-readable format """ for unit in ['B', 'KiB', 'MiB', 'GiB', 'TiB', 'PiB', 'EiB', 'ZiB']: if abs(count) < 1024.0: return f"{count:3.1f} {unit}" count /= 1024.0 return f"{count:.1f} YiB"
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def get_accuracy(output, targets): """calculates accuracy from model output and targets """ output = output.detach() predicted = output.argmax(-1) correct = (predicted == targets).sum().item() accuracy = correct / output.size(0) * 100 return accuracy
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from socket import inet_aton from struct import unpack def ip2long(ip_addr): """Converts an IP address string to an integer.""" ip_packed = inet_aton(ip_addr) ip = unpack('!L', ip_packed)[0] return ip
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from typing import Iterable from typing import Dict def get_tag(tags: Iterable[Dict[str, str]], key: str) -> str: """Takes a list of tags and a key name, returns the the value for the tag with the given key name.""" if not tags: return '' name_tag = filter(lambda t: t['Key'] == key, tags) retu...
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def dim_comparator(val1, val2, name1, name2, dim_string, tolerance=0): """ Get the string representation of the relations. Args: val1: dimensional value of object 1 (int). val2: dimensional value of object 2 (int). name1: name of object 1 (str). name2: name of object 2 (str)...
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def ER(radius): """ Return equivalent radius (ER) """ return radius
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def get_subcoll_obj_paths(coll): """Return paths to all files within collection and its subcollections recursively""" ret = [] for sub_coll in coll.subcollections: ret += get_subcoll_obj_paths(sub_coll) for data_obj in coll.data_objects: ret.append(data_obj.path) return ret
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def _is_hdf5_filepath(filepath): """Predicate the filepath is a h5 file.""" return (filepath.endswith('.h5') or filepath.endswith('.hdf5') or filepath.endswith('.keras'))
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def termlists_are_equal(terms1, terms2): """ Check whether two given lists of terms are (syntactic-wise) equal. """ return len(terms1) == len(terms2) and all(x.is_syntactically_equal(y) for x, y in zip(terms1, terms2))
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from functools import reduce def class_recall(queried_dataset, top_indices, query_image_class): """Computes the recall for the results of the given top distances query. Args: queried_dataset: the dataset that was queried. It must have the exact same classes as the query dataset. It is used to retri...
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def evaluate_var(**context): """Receives 2 variables, the evaluation condition and the 2 results for the case of result is True or False Inputs: templates_dict: var_in str -- value 1 to evaluate var_eval str -- value 2 of the condition to evaluate op_kwargs: ...
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def yDP2LP(dpY, dptZero, lPix = 1.0): """Convert device coordinates into logical coordinates dpY - y device coordinate dptZero - device coordinates of logical 0,0 point lPix - zoom value, number of logical points inside one device point (aka pixel) return coordinate in logical coo...
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def is_box_section(title): """ Box sections have specific titles: "Box N | Title goes here". This function determines whether title belongs to a box section. """ if '|' not in title: return False return 'Box' in title.split('|')[0]
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def email_to_uni(email): """parse emails to retrieve UNIs""" return email.split('@')[0]
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def create_fmt(field_widths, keep_fields): """Given two lists: 1) the field widths 2) list with a 1 or 0 indicating whether or not to keep a field, create a fmt string Field Widths - https://docs.python.org/3.4/library/struct.html Format C Type Python Type Standard Size x ...
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def weekday_name(day_of_week): """Return name of weekday. >>> weekday_name(1) 'Sunday' >>> weekday_name(7) 'Saturday' For days not between 1 and 7, return None >>> weekday_name(9) >>> weekday_name(0) """ if day_of_week == 1: ...
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import configparser def _read_config_file_section(section, config_file_path, items): """Read a configuration file section Arguments --------- section : str Name of the section to read config_file_path : str Absolute path to the config file items : list of str A list of...
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def longest_common_prefix(s1: str, s2: str) -> str: """ Finds the longest common prefix (substring) given two strings s1: First string to compare s2: Second string to compare Returns: Longest common prefix between s1 and s2 >>> longest_common_prefix("ACTA", "GCCT") '' >>> long...
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import torch def no_masker(batch_size, mask_shape): """Return a mask of all 1.""" mask = torch.ones((batch_size, *mask_shape)).byte() return mask
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def wants_spousal_support(responses, derived): """ Return whether or not the user wants an order for spousal support """ return 'Spousal support' in derived['orders_wanted']
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def zigbee2mqtt_device_name(topic, data, srv=None): """Return the last part of the MQTT topic name.""" return dict(name=topic.split("/")[-1])
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def num_params(model, count_fixed=False, display_all_modules=False, print_stats=False): """Counts number of parameters and layers in the model _exclude_from_layer_count contains names that shouldn't be counted as layers, shortcut layer, for example. Args: model (nn.Module): ...
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from typing import Any from typing import MutableMapping from typing import MutableSequence def is_adjacency_list(item: Any) -> bool: """Returns whether 'item' is an adjacency list.""" return (isinstance(item, MutableMapping) and all(isinstance(v, MutableSequence) for v in item.values()))
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def realcar(np_raster, np_filtrada): """ Função auxiliar que incrementa um imagem filtrada de passa alta a imagem original Args: np_raster (np.ndarray): imagem original np_filtrada (np.ndarray): imagem com filtro de passa alta Returns: (np.ndarray): imagem realçada """ retu...
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import torch def one_hot_add(inputs, shift): """Performs (inputs - shift) % vocab_size in the one-hot space. Args: inputs: Tensor of shape `[..., vocab_size]`. Typically a soft/hard one-hot Tensor. shift: Tensor of shape `[..., vocab_size]`. Typically a soft/hard one-hot Tensor...
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def get_variables_used(string, variable_dict): """Returns what variables are used in the given string as a list.""" used_variables = [] for key in variable_dict: temp_string = string.replace(key, "") if temp_string != string: used_variables.append(key) string = temp_s...
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def if_(condition_func, validation_func): """ Generates a validator to conditionally run a validation function Args: condition_func: a function that evaluates to a boolean validation_func: a validation function to apply """ def wrapper(obj, prop): if not condition_fu...
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def _is_surf(config): """Returns True iff we are on the surface""" return "surface_file" in config and config["surface_file"]
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def is_int(value): """Check if value is an int.""" return isinstance(value, int)
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def constructor_is_method_name(constructor: str) -> bool: """Decides wheter given constructor is a method name. Cipher is not a method name Cipher.getInstance is a method name getS is a method name """ found_index = constructor.find(".") method_start_i = found_index + 1 return ...
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def mk_residue(name, num, restype='X', chain=None, label=None, mol='', color='magenta', style=None): """Generate the PyMol code to display a residue.""" return """ create %(label)s, %(name)s and resi %(num)s %(chain)s and not (name %(bbone)s) show %(style)s, %(label)s color %(color)s, %(label)s ...
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import random def large_integers(n): """ Return sequence of N large random integers. """ return [random.randint(-50, 50) * 1000000 + random.randint(0, 10000) for _ in range(n)]
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def find_project_dir(runpath): """ Scans up directories until it finds the project folder. :param runpath: pathlib.Path, where summit_core is called from. :return: pathlib.Path, the base project directory """ runpath = runpath.resolve() if runpath.name == "Summit" or runpath.name == 'summit...
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def basis(x): """ Return the fixed basis of ``x``. EXAMPLES:: sage: V = VectorSpace(QQ,3) sage: S = V.subspace([[1,2,0],[2,2,-1]]) sage: basis(S) [ (1, 0, -1), (0, 1, 1/2) ] """ return x.basis()
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import re def is_function_decl(index, lines): """Check that the line is a function declaration""" line = lines[index] previous_line = lines[index - 1] types = ["char", "signed char", "unsigned char", "string", "short", "short int", "signed short", "signed short int", "unsigned short", "u...
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def verse(bottle): """Sing a verse and account for plurality""" next_bottle = bottle - 1 s1 = '' if bottle == 1 else 's' s2 = '' if next_bottle == 1 else 's' num_text = 'No more' if bottle == 1 else next_bottle return '\n'.join([ f'{bottle} bottle{s1} of beer on the wall,', ...
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def pressure_to_elevation(pressure: float, p0: float) -> float: """ Calculate the elevation for a given pressure. Args: pressure: The pressure, in hPa (mbars) p0: P0, the pressure at sea level. Returns: Elevation in meters """ return (1 - ((pressure / p0) ** 0.190284)...
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import cmath # Can return complex numbers from square roots def quad_roots(a=1.0, b=2.0, c=0.0): """Returns the roots of a quadratic equation: ax^2 + bx + c = 0. INPUTS ======= a: float, optional, default value is 1 Coefficient of quadratic term b: float, optional, default value is 2 ...
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def is_tf(df): """ Determines if a string is a 'boolean string': 't', 'f', 'True', or 'False'. Args: df (pandas.DataFrame): A dataframe that contains strings. Returns: pandas.DataFrame: A dataframe of booleans that is True if the entry is any of the valid 'boolean string' val...
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def AdaptReadableDate(date_obj): """Adapts a datetime.date object to its ISO-8601 date notation.""" return date_obj.isoformat()
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def get_contract(path: str) -> str: """ Acquire contract content from storages. Currently only supports file storage Args: path (str): File path Returns: str: Context string """ contract: str = "" # Storage Path with open(path, "r") as file: contract...
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def rexists(sftp_client, path): """ Returns true if the remote directory or file under path exists. """ try: sftp_client.stat(str(path)) except IOError as err: if err.errno == 2: return False raise else: return True
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import re def _parse_gcs_path(gcs_path): """Parse GCS path into bucket and path. Args: gcs_path: a GCS path, e.g. gs://bucket/foo/bar Returns: (bucket, path), e.g. ('bucket', 'foo/bar') for gs://bucket/foo/bar'. Raises: ValueError: if gcs_path is not a GCS path. """ m = re.match("^gs://([^/]+...
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import requests def check_pwn(email): """Takes a string (email address) as input and checks whether the email address is contained within a breach registered in the Haveibeenpwnd database. If the request is empty or generates any other errors, nothing is returned. This is done to make it testable whether an emai...
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def signIn(command): """ Check if command is to Sign In (s | signin). """ return (command.strip().lower() == 's' or command.strip().lower() == 'signin')
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def inverse_dict(original): """Return a dictionary that is the inverse of the original. Given the pair original[key] = value, the returned dictionary will give ret[value] = key. It is important to keep two separate dictionaries in case there is key/value collision. Trying to insert a value that matches...
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import json def json_output(input): """Format JSON output.""" try: return json.dumps(input, indent=2, sort_keys=True) except ValueError: return input
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def _sparse_ftrs_indices0(ftr_name): """Returns the name of the 0th axis indices for `ftr_name`""" return f"{ftr_name}_indices0"
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import random def generate_unique_randomized_list(list_size=None): """ Purpose: Generate a Randomized List with Unique Values of a sepcified size Args: list_size (Int): Size of list to generate. Lists default to 50 ints Returns: randomized_list (List): Unsorted ...
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from collections import defaultdict def convert_idsw_to_heatmap_format(filepath, dest_file): """Convert idsw format to heatmap formats idsw: <frame> <id1_gt> <id1> <bb1_left> <bb1_top> <bb1_width> <bb1_height> <id2_gt> <id2> <bb2_left> <bb2_top> <bb2_width> ... heatmap: <frame> <bb1_left> <bb1_top> <bb1_...
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def add_to_inventory(inventory, added_items): """Combine a list of loot with an inventory.""" for loot in added_items: inventory.setdefault(loot, 0) inventory[loot] += 1 return(inventory)
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def gtVcf(ref, alt, gt): """ Get genotype in VCF style string""" if gt == ref: return "0" if gt == alt: return "1" return "."
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import socket import time def find_devices(find_first=False, sock_timeout=3, search_timeout=3): """Finds spectrometers broadcasting on the local network Args: find_first (bool): whether to return only the first spectrometer found sock_timeout (int): UDP socket timeout in seconds searc...
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def get_geo_coordinates(tweet): """ Get the user's geo coordinates, if they are included in the payload (otherwise return None) Args: tweet (Tweet or dict): A Tweet object or dictionary Returns: dict: dictionary with the keys "latitude" and "longitude" or, if unavaiab...
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def copy_seats(seats): """Create copy of seats list of list.""" return [[seat for seat in row] for row in seats]
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import torch def noncausal_denominator(qs, ks): """Computes FAVOR normalizer in noncausal attention. Args: qs: query_prime tensor of the shape [L,B,H,M]. ks: key_prime tensor of the shape [L,B,H,M]. Returns: FAVOR normalizer in noncausal attention. """ all_ones = torch.ones([ks.shape[0]]).to(k...
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import ipaddress def cidr_stix_pattern_producer(data): """Convert a CIDR from TC to a STIX pattern.""" if isinstance(ipaddress.ip_network(data.get('summary'), strict=False), ipaddress.IPv6Network): return f"[ipv6-addr:value = '{data.get('summary')}']" return f"[ipv4-addr:value = '{data.get('summa...
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def processLine(line): """ Given a string like this: '01. anime_name---------: Naruto' This function returns a list: ['01. anime name', 'Naruto'] which is later used as key-value pairs in our data dictionary. """ sep_index = line.find('-:') if sep_index == -1: err_msg = 'Index Error...
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def subdict(d, expected_dict): """Return a new dict with only the items from `d` whose keys occur in `expected_dict`. """ return {k: v for k, v in d.items() if k in expected_dict}
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def gen_Datastream(temperature, position, drone_id): """Generate a datastream objects.""" datastream = { "@type": "Datastream", "Temperature": temperature, "Position": position, "DroneID": drone_id, } return datastream
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def round_df_scores(df_scores, score_types): """Round scores to the precision set in the score type. Parameters ---------- df_scores : pd.DataFrame the score dataframe score_types : list of score types Returns ------- df_scores : the dataframe with rounded scores """ df...
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import torch def get_gae(value, reward, args, is_normalize=False, eps=1e-8): """Compute generalized advantage estimator Args: value (list): Contains value function across trajectories reward (list): Contains rewards across trajectories for specific agent args (argparse): Python argpar...
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from typing import List import click def output_result(proc_packages: int, errors: List[str]) -> bool: """Output number of packages processed and errors.""" click.echo(f"Checked {proc_packages} package(s).") if errors: click.echo(f"{len(errors)} errors found:\n" + ("\n").join(errors)) retu...
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def prob(factor, *entry): """ argument `factor`, a dictionary of domain and probability values, `entry`, a list of values, one for each variable in the same order as specified in the factor domain. Returns p(entry) """ return factor['table'][entry]
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from typing import Union def topic_to_bytes(topic: Union[bytes, str]) -> bytes: """ Return the passed topic as a :class:`bytes` object. """ if isinstance(topic, str): topic = topic.encode() return topic
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def _extract_first_field(data): """Extract first field from a list of fields.""" return list(next(iter(zip(*data))))
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def get_game_recap(content_feed): """ Searches the content feed for the game recap. Args: content_feed (dict): NHL Content Feed Returns: recap (dict): Dictionary of the full recap event nhl_video_url (string): URL pointing to the NHL Video Recap """ epg = content_feed["med...
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def add_sky(config): """Add sky temperature model, EoR, and foregrounds, using defaults.""" sky_config = """ sky: Tsky_mdl: !Tsky datafile: HERA_Tsky_Reformatted.npz interp_kwargs: pol: xx eor: noiselike_eor: {} foregrounds: diffuse_foreground: {} ...
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