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def convertLUtoUN(s): """Capitalize a string and remove any underscores. If 'hello_world' is given, it will return 'HelloWorld'. """ return ''.join([word.capitalize() for word in s.split('_')])
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import torch def compute_ece(predictions, labels, num_bins=None): """ Compute the expected calibration error with binning Args: predictions (tensor): a batch of categorical predictions with shape [batch_size, num_classes] labels (tensor): a batch of labels with shape [batch_size] num...
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def genRef(ref): """Returns input as function""" def r(): return ref return r
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def kcorrect_calc( d: float, oldflux: float, z1: float, z2: float, a: float ) -> float: """Performs the k-correction calculation given the required arguments. Args: d: The distance modulation, in terms of a factor. E.g. a value of 10 would indicate a distance change of 10x. oldf...
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from typing import List def _read_line() -> List[int]: """Read an input line, split it and convert to ints.""" return list(map(int, input().split()))
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from pathlib import Path def _deduce_images_and_annos_paths(root_path, subset): """Deduces paths for images and annotations. It returns the root path that contains all the sequences belonging to the specific subset. Args: root_path (str): Root directory path to the UA-DETRAC dataset. subs...
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def linscale(seq, minval=0.0, maxval=1.0): """Linearly scales all the values in the sequence to lie between the given values. Shifts up to minval and scales by the difference ``maxval-minval`` If all values are identical, then sets them to `minval`.""" m, M = min(seq), max(seq) def sc(s, m=m, M=M): ...
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import copy def add2dict(key: str, val, dict: dict): """Add key/value pair to dict""" new_dict = copy.deepcopy(dict) new_dict[key] = val return new_dict
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def rotate_counter_clockwise(shape): """Given a shape, rotates it counter clockwise""" return [ [shape[y][x] for y in range(len(shape))] for x in range(len(shape[0]) - 1, -1, -1) ]
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def event_counter(object_type: str) -> str: """Return db key for the event counter for the object type. The value stored at this key is used to generate a unique event id. Args: object_type (str): Type of object. Returns: str, database key for the event counter """ return 'ev...
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import re def remove_tags(text: str) -> str: """ Removes tags and extracts text inside square brackets [] and angle brackets <>. Also removes 'cleartext' 'CLEARTEXT' or 'Cleartext' as well as language attributes (2 letter uppercase sequences following 'cleartext' and space(s) or dash(es)). :param...
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def is_every_letter_guessed(word, guesses): """Returns if every letter in the target word is accounted for in the user's guesses. """ # It's easier to check the converse; are we missing anything? Check # if any one of the letters in the target word *isn't* guessed. for letter in word: i...
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def parse_timedelta_from_api(data_dict, key_root): """Returns a dict with the appropriate key for filling a two-part timedelta field where the fields are named <key_root>_number and <key_root>_units. Parameters ---------- data_dict: dict API json response containing a key matching the key_r...
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def construct_api_params( business_unit=None, event_type=None, limit=None, page_token=None ): """ Constructs the parameters object for the API call. Note that startDateUtc and endDateUtc are not listed here (although they are parameters); this is because they are included...
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import requests def get_json(name, *args, **kwargs): """Retrieve JSON from a (REST) API server after checking correct response.""" r = requests.get(*args, **kwargs) assert r.ok, "%s access failed: %s" % (name, r.reason) return r.json()
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def parse_geometry(geometry): """Parse a geometry string and returns a (width, height) tuple Eg: '100x200' ==> (100, 200) '50' ==> (50, None) '50x' ==> (50, None) 'x100' ==> (None, 100) None ==> None A callable `geometry` parameter is also supported. """ if n...
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def signed_shift(val, shift): """Bit shifts the value val. +ve values shift left and -ve shift right. Args: val (int): Value to be shifted shift (int): Number of bits to shift by Returns: int: Shifted result """ return val << shift if shift >= 0 else val >> -shift
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import logging def get_logger(sub_module, log_name): """ Get logger by name and sub module. Args: sub_module (str): Sub module name, type is string. log_name (str): Log file name, type is string. Returns: Logger, logger instance named by sub_module and log_name. """ ...
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def module_exists(module_name): """ Check if a module can be imported. """ try: __import__(module_name) except ImportError: return False else: return True
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def match_ans(input_guess, current_guess, ans): """ Matching new guess alphabet to each answer char if equals, and return the replaced hint of latest guess. :param input_guess: str, the new guess alphabet. :param current_guess: str, the hint of current guess. :param ans: str, the hidden random word....
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import struct def octet(value): """Encode an octet value. :param value: Value to encode :rtype: bytes :raises: TypeError """ if not isinstance(value, int): raise TypeError('int type required') return struct.pack('B', value)
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def processFile(fileName: str): """ Processes the file and returns the amount of vertices in the graph, as well as the adjency matrix representation of the graph. """ file = open(fileName, "r+") lines = file.readlines() if(len(lines) < 2): raise Exception("File must have atleast two...
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def cart2wind(cart_angle): """ 0deg is North, rotate clockwise""" cart_angle = 90. - cart_angle #rotate so N is 0deg cart_angle =cart_angle % 360. return cart_angle
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from typing import Iterable def to_abs_coord(v, mat): """ Change the local vertices coordinate to absolute coordinate :param v: vector or a list of vertices :param mat: matrix_world :return: the Absolute vertices """ if isinstance(v, Iterable): list_verts = [] for i in v: ...
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def _get_weight_param_summary(wp): """Get a summary of _NeuralNetwork_pb2.WeightParams Args: wp : _NeuralNetwork_pb2.WeightParams - the _NeuralNetwork_pb2.WeightParams message to display Returns: a str summary for wp """ summary_str = '' if wp.HasField('quantization'): nbits = wp...
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def ringIsClockwise(ringToTest): """ determine if polygon ring coordinates are clockwise. clockwise signifies outer ring, counter-clockwise an inner ring or hole. """ total = 0 i = 0 rLength = len(ringToTest) pt1 = ringToTest[i] pt2 = None for i in range(0, rLength - 1): ...
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def all_attrs_missing(record): """Checks if all attributes have missing values, excluding ID and Class""" return all(value == '?' for value in record[1:-1])
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def is_expression(expression: list) -> bool: """Return True if the string is an expression, False otherwise. A string is an expression if it starts with the "=" symbol. Raises: ValueError: Empty expression raises when the string is empty. """ if len(expression) == 0: raise ValueErr...
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from datetime import datetime def convert_date(raw_date: str): """ Convert raw date field into a value interpretable by the dataserver. The date filtering API expects mm/dd/YYYYZ format. """ if raw_date.startswith("None"): return None try: date = datetime.strptime(raw_date, "%...
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def normalise(x): """Normalise set of vectors by elementwise mean and standard deviation.""" x_mean = x.mean(0) x_std = x.std(0) return (x - x_mean) / x_std, x_mean, x_std
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def any_in_any(a, b): """return true if any item of 'a' is found inside 'b' else return false """ if len([x for x in a if x in b]) > 0: return True else: return False
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def table_name_suffix(load_table_s3_prefix: str) -> str: """ Table name suffix should be '__ct' if the S3 prefix is from change tracking. Parameters ---------- load_table_s3_prefix : str The load's prefix as determined by its S3 key. Returns ------- str "__ct" or "" dep...
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def get_portal_registration_status(self) -> dict: """Get current Orchestrator Cloud Portal registration status .. list-table:: :header-rows: 1 * - Swagger Section - Method - Endpoint * - spPortal - GET - /spPortal/registration :return: Retur...
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def reduce(combiner, seq): """Combines elements in seq using combiner. >>> reduce(lambda x, y: x + y, [1, 2, 3, 4]) 10 >>> reduce(lambda x, y: x * y, [1, 2, 3, 4]) 24 >>> reduce(lambda x, y: x * y, [4]) 4 """ reduced = seq[0] for x in seq[1:]: reduced = combiner(reduced,...
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def anglicize1to19(n): """ Returns the English equiv of n. Parameter: the integer to anglicize Precondition: n in 1..19 """ if n == 1: return 'one' elif n == 2: return 'two' elif n == 3: return 'three' elif n == 4: return 'four' elif n == 5: ...
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import math def dejmps_gates_and_measurement_alice(q1, q2): """ Performs the gates and measurements for Alice's side of the DEJMPS protocol :param q1: Alice's qubit from the first entangled pair :param q2: Alice's qubit from the second entangled pair :return: Integer 0/1 indicating Alice's measure...
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def min_max_norm(x): """ Performs min-max normalization --> scales values in range between 1 and 0 :param x (1-D array like) :return: (1-D np.array) min-max normalized input """ mini = min(x) maxi = max(x) return (x - mini) / (maxi - mini)
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from typing import List import torch def pad_sequences_from_list(array: List[List[int]]) -> torch.Tensor: """Performs post padding on sequences to make sequences same length. Adds padding with id 0 Args: array (List[List[int]]): List of list of token_ids Returns: torch.Tensor: Padded...
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def clean_country_names(df): """ Given a dataframe with only 1 column 'country/region' cleans country names """ cleaned_df = df.replace({'country/region': {'US': 'United States', 'Taiwan*': 'Taiwan', 'Kor...
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def get_cik_path(cik): """ Get path on EDGAR or S3 for a given CIK. :param cik: company CIK :return: """ return "edgar/data/{0}/".format(cik)
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def LCross(S1,S2): """ S1 and S2 are two element tuples of two element tuples of x,y coordinates of the two lines: Routine to check if two line segments intersect returns 0 if they don't intersect, 1 if they intersect """ ((px1,py1),(px2,py2)) = S1 ((px3,py3),(px4,py4)) = S2 # First some utility f...
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import csv def parse_csv(csv_file): """Parses an individual CSV file into a set of data points Args: csv_file (File): a csv file Returns: List[List[int,int,float]]: A list of data points. Each data points consist of ...
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def set_whole_node_entry(entry_information): """Set whole node entry Args: entry_information (dict): a dictionary of entry information from white list file Returns: dict: a dictionary of entry information from white list file with whole node settings """ if "submit_attrs" in entry_...
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import imp def ModuleAvailability(module_name): """ Checks if a module is installed/available on the current system. Args: module_name: [str] name of the module to check for availability. Returns: A boolean indicating whether the module is available. """ try: imp.fin...
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def transform_test(true, pred): """Transform true and predicted raster data sets to flat arrays. Parameters ---------- true : array-like Testing data set raster as a 2D NumPy array. pred : array-like Predicted values as a 2D NumPy array. Returns ------- y_true : arr...
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import hashlib def hash_pass(password, salt): """Returns the hash of `password` with salt `salt`""" return hashlib.pbkdf2_hmac('sha512', password.encode(), salt, 100000)
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from typing import Any def is_false_schema(schema: Any) -> bool: """True if the value of `schema` is the always reject schema. The `false` schema forbids a given value. For writers this means the value is never produced, for readers it means the value is always rejected. >>> is_false_schema(parse_js...
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def get_tfidf_score(tf_vocab, idf_vocab): """Calculate the tfidf score for an article :param tf_vocab: a dict that maps a word into its tf value :param idf_vocab: a dict that maps a word into its idf value :returns: a list of tuple, where the first element is the word, the second element i...
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def format_output(header, content): """ Formatted the result header and content, separated by double newlines. """ if content is not None: if type(content) == str: content = [content] return "\n\n".join([header, *content]) else: return header
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import codecs def _get_encoding(enc, read=False): """Check if encoding exists else return utf-8.""" try: codecs.lookup(enc) except LookupError: enc = 'utf-8' # If reading utf-8, lets just read with utf-8-sig # so we don't have to worry about an accidental BOM if read and enc....
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def get_tensor_data(tensor_data_array, tensor_name): """Find the tensor data for this tensor by its name.""" for i in range(len(tensor_data_array.data_array)): if tensor_data_array.data_array[i].name == tensor_name: return tensor_data_array.data_array[i] return None
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def is_identical_aggregation(aggr_x: dict, aggr_y: dict) -> bool: """ Checks whether two aggregated signals are identical Both signals are checked on and therefore *must* contain the following keys: - type - subject - handler :param aggr_x: Aggregation x :param aggr_y: Aggregation y ...
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def collect_defines(file_name): """ Collect all XCB defines from file. """ defines = [] with open(file_name, "r") as f: for line in f.readlines(): line = line.strip() if not line.startswith("#define XCB"): continue defines.append(line) ...
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def MMAX_POSITION_FROM_ID(ID): """ Extract the position from a MMAX ID """ return int(str(ID).split('_')[-1])
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def unpad(img, pads): """ img: numpy array of the shape (height, width) pads: (x_min_pad, y_min_pad, x_max_pad, y_max_pad) @return padded image """ (x_min_pad, y_min_pad, x_max_pad, y_max_pad) = pads height, width = img.shape[:2] return img[y_min_pad:height - y_max_pad, x_min_pad:width ...
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def token_in_list_ignore_case(token: str, list_check: list) -> bool: """Function that checks if the given token is in the list of tokens ignoring the case. Args: token: Token to be searched in the list. list_check: List of tokens within which to search. Returns: Boolean value: ...
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def remove(base, string): """Remove a substring from a string""" return base.replace(string, '')
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def sum_to_num(max_number): """ Returns the sum from 0 to max_number inclusive. >>> from gender_novels.testing import tests >>> x = tests.sum_to_num(3) >>> x 6 >>> x = tests.sum_to_num(100) >>> x 5050 """ sum_result = 0 for n in range(max_number + 1): sum_result...
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def recombination(temperature): """ Calculates the case-B hydrogen recombination rate for a gas at a certain temperature. Parameters ---------- temperature (``float``): Isothermal temperature of the upper atmosphere in unit of Kelvin. Returns ------- alpha_rec (``float``): ...
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def all_of(pred, iterable): """ Returns ``True`` if ``pred`` returns ``True`` for all the elements in the ``iterable`` range or if the range is empty, and ``False`` otherwise. >>> all_of(lambda x: x % 2 == 0, [2, 4, 6, 8]) True :param pred: a predicate function to check a value from th...
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def distance(coord_a, coord_b): """ Calcuate the distance between 2 coordinates. Arguments: coord_a (array): coordinate of point a coord_b (array): coordinate of point b Return: dist (float) """ assert len(coord_a) == len(coord_b) dim = len(coord_a) sum_square_d...
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import math def parallax( emission1: float, gndaz1: float, emission2: float, gndaz2: float ) -> float: """Returns the parallax angle between the two look vectors described by the emission angles and sub-spacecraft ground azimuth angles. Input angles are assumed to be radians, as is the return v...
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def _time_string(minutes): """Time D-hh:mm:ss format.""" minutes = max(minutes, 0) seconds = int(round((minutes % 1) * 60)) hours, minutes = divmod(int(minutes), 60) return f'{hours:02}:{minutes:02}:{seconds:02}'
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def ackermann(m: int, n: int) -> int: """Implement Ackermann function recursively. Raise: - TypeError for given non integers - ValueError for given negative integers """ if type(m) is not int or type(n) is not int: raise TypeError("m and/or n isn't integer") if m < 0 or n < 0: ...
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def validate_unit(unit: str) -> str: """ Validates the unit of an object. :param unit: The unit of the object. :return: The validated unit. """ if not unit: raise ValueError("Unit must not be empty.") if len(unit) > 100: raise ValueError("Unit must not be longer than 100 cha...
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from typing import Callable from typing import Set import click from typing import Union from typing import Optional def make_existing_cluster_id_option( existing_cluster_ids_func: Callable[[], Set[str]], ) -> Callable[[Callable[..., None]], Callable[..., None]]: """ Return a Click option for choosing an ...
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def wcPy(f): """Count up lines in file 'f'.""" return sum(1 for l in f)
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def pop(array, index=-1): """Remove element of array at `index` and return element. Args: array (list): List to pop from. index (int, optional): Index to remove element from. Defaults to ``-1``. Returns: mixed: Value at `index`. Warning: `array` is modified...
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def get_tags(html_soup): """ Extracts keywords of the article from content Input : Content in BeautifulSoup format Output : List of keywords of the article """ tags = html_soup.findAll('a', attrs = {"class" : "tag"}) all_tags = [] for i in tags: all_tags.append(i.get_text())...
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def bprop_sub(x, y, dz): """Backpropagator for primitive `sub`.""" return (dz, -dz)
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def load_input(filename): """ Load input ciphertext """ with open(filename) as f: return [int(token) for token in f.readlines()[0].strip().split(",")]
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def get_unique_name(new_name, name_list, addendum='_new'): """ Utility function to return a new unique name if name is in list. Parameters ---------- new_name : string name to be updated name_list: list list of existing names addendum: string addendum appended to new...
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def twitter_id_from_timestamp(ts: float) -> int: """Get twitter id from timestamp Args: ts (float): time stamp in seconds Returns: int: twitter id representing the timestamp """ return (int(ts * 1000) - 1288834974657) << 22
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def node_vertex_name(mesh_node, vertex_id): """ Returns the full name of the given node vertex :param mesh_node: str :param vertex_id: int :return: str """ return '{}.vtx[{}]'.format(mesh_node, vertex_id)
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def AES_read_key(filepath): """Read in the key to use for encryption / decryption""" fh = open(filepath, 'r') # read and encode to bytes key = fh.read().encode("utf-8")[0:32] fh.close() return key
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def pivot_area_cluster(df, cluster, aggfunc=sum): """Convert long data into a matrix, pivoting on `cluster` For example, take BRES/IDBR data at Local authority (LAD) geographic level and SIC4 sectoral level to create matrix with elements representing the activity level for a given LAD-SIC4 combination....
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def get_user_input(question='Enter your transaction amount: '): """ Returns the user input Parameters ---------- question : str The question the user sees """ return float(input(question))
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def is_int(arange): """ Check if a range is int Args: test_range ([int/float, int/float]): range to test Returns: .boolean """ if (isinstance(arange[0], int) and isinstance(arange[1], int)): return True return False
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import re def GetExamplesTextFromDocOptText(DocOptText): """Get script usage example lines from a docopt doc string. The example text line start from a line containing `Examples:` keyword at the beginning of the line. Arguments: DocOptText (str): Doc string containing script usage examples l...
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def two_sided_midpoint_PV(dist, s, out_dir, PVs_file): """ two-sided midpoint PV - Hohna et al. 2017 :param dist: simulated distributions :param s: current original statistic to compare :param out_dir: where to write results to :param PVs_file: the calculated two-sided midpoint p-values :ret...
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def _repr_column_dict(dumper, data): """ Represent ColumnDict in yaml dump. This is the same as an ordinary mapping except that the keys are written in a fixed order that makes sense for astropy table columns. """ return dumper.represent_mapping(u'tag:yaml.org,2002:map', data)
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def _dict_of_targetid(submitid, charid, journalid): """ Given a target of some type, return a dictionary indicating what the 'some type' is. The dictionary's key will be the appropriate column on the Report model. """ if submitid: return {'target_sub': submitid} elif charid: ...
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from typing import List from typing import Dict def _normalise_map(unformatted_map: List[List[str]]) -> Dict[str, str]: """Input format: [[value1,key1,key2],[value2,key4]] Output format: {key1:value1, key2: value1, key3:value2}""" normalised_map = {} for group in unformatted_map: value = grou...
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def get_class_name(node): """ Simple wrapper to get a _class knob off a node so that you can use standard nuke nodes like group, NoOp etc, but give them their own "class". Args: node (nuke.Node): A node object we want to get a class from. Returns: str: The node class. """ ...
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import torch def categorical_accuracy(y, y_pred): """Calculates categorical accuracy. # Arguments: y_pred: Prediction probabilities or logits of shape [batch_size, num_categories] y: Ground truth categories. Must have shape [batch_size,] """ return torch.eq(y_pred.argmax(dim=-1), y).s...
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def remove_stop_words(input_str): """Removes stop words from query string""" remove_list = ['a', 'an', 'and', 'of', 'as', 'in', 'for', 'on', 'the', 'near', 'not', 'to', 'is'] word_list = input_str.split() cleaned_str = ' '.join([i for i in word_list if i.lower() not in remove_list]) return cleaned_s...
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def turc(tmean, rs, rh, k=0.31): """Evaporation calculated according to [turc_1961]_. Parameters ---------- tmean: pandas.Series average day temperature [°C] rs: pandas.Series incoming solar radiation [MJ m-2 d-1] rh: pandas.Series mean daily relative humidity [%] k:...
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import math def rms_error(seq1, seq2): """Returns the RMS error between two lists of values""" assert len(seq1) == len(seq2) return math.sqrt(sum((x - y) ** 2 for x, y in zip(seq1, seq2)) / len(seq1))
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def get_sample_rate(header): """ get sample frequency from header """ sample_rate = int(header[0].strip().split()[2]) return sample_rate
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def _any_trits(left: int, right: int) -> int: """ Adds two individual trits together and returns a single trit indicating whether the result is positive or negative. """ res = left + right return (res > 0) - (res < 0)
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def fields_allocation(MINUTES=200, size=5): """ Allocate an empty fields value with "." everywhere """ return [ [["." for _ in range(size)] for _ in range(size)] for _ in range(MINUTES * 2 + 3) ]
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def get_task_from_request_form(request): """ Parses a request from the API endpoint attempting to extract the JSON information and transform it on a python dict Returns ------- dict a dictionary obtained from the provided json Raises ------ ValueError If a required ...
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def format_sentences_BERT(_row,weak_supervision=False): """ Given dataframe input row, formats input sentence for tokenization: appends context to each sentence (repeats target word if weak_supervision) and appends [CLS] and [SEP] tags. """ if not weak_supervision: return '[CLS] '+_row.lo...
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import re def getFuncNames(funcNamesStr): """ Gets a list of function names from the string provided, where the function names are separated by whitespaces or commas. Arguments: funcNamesStr: String of function names. Returns: List of function names in the string. ...
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def fix_encoding(training_data): """Fix utf-8 file encoding after word2phrase mangles it (happens sometimes). :param training_data: file containing text with encoding that needs fixing :return: filename of repaired text file """ out_fname = training_data.replace('.txt', '.utf-8.txt') with open(...
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def make_cluster_values_adjacent(in_clustering): """ Reduces a cluster distribution to one where every cluster number is adjacent to another, starting at 0. This means that if there are n=10 clusters, every cluster will be guaranteed to be the values 0 to 9. Parameters ---------- in_clustering ...
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def insert (source_str, insert_str, pos): """ Inserts insert_str at source_str[pos], displacing the rest.""" if pos == 0: source_str = insert_str + source_str[pos:] else: source_str = source_str[:pos] + insert_str + source_str[pos:] return source_str
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def get_alg_shortcode(alg_str): """ Get shortcode for the models, passed in as a list of strings """ if alg_str == "adahedged": return "ah" else: return alg_str
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def _get_pdr_module_dict(ps_data, module_id, key_name=None): """ Returns the first occurrence of a module entry from PDR participant data for the specified module_id :param ps_data: A participant data dictionary (assumed to contain a 'modules' key/list of dict values) :param module_id: The name / ...
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def num_params(model): """ Function that outputs the number of total and trainable paramters in the model. """ numTotalParams = sum([params.numel() for params in model.parameters()]) numTrainableParams = sum([params.numel() for params in model.parameters() if params.requires_grad]) return numTot...
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