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def guard(f, *args, **kwargs): """ Run a function. Return (is_error, result), where ``is_error`` is a boolean indicating whether it raised an exception. In that case, ``result`` will be an exception. """ try: return (False, f(*args, **kwargs)) except Exception as e: return (...
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def get_kind_and_id(thing_id): """ Args: thing_id (str): a reddit thing id in the form t#_#+ Returns: (str, str): a tuple of kind and id """ return thing_id.split("_", 1)
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def rescale_eigenfunctions(eigenfunctions, scale_factor=1.0): """ Scale eigenfunctions by a `scale_factor` """ return scale_factor * eigenfunctions
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def sample_cov(r, **kwargs): """ Returns the sample covariance of the supplied returns """ return r.cov()
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def street_not_in_use(street, items): """ Check if elements of street are not in use already. For example [[(2, 'black'), (3, 'black'), (4, 'black'),(5, 'black)],[(3, 'black'), (4, 'black'), (5, 'black')]] would return false, because 3, 4 and 5 are already used :param street: List of elements that w...
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def both_set_and_different(first, second): """ If any of both arguments are unset (=``None``), return ``False``. Otherwise return result of unequality comparsion. Returns: bool: True if both arguments are set and different. """ if first is None: return False if second is No...
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def CtoF(t): """Conversion: Celcius to Fahrenheit.""" return (t*9)/5+32
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def l2_norm_sqr(w): """ Returns square of L2 norm of the given matrix (w). square of L2 norm of a matrix is simply the sum of square of elements of the matrix. @input: w, a theano shared variable. @output: L2 norm of w """ return (w ** 2).sum()
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def load_external_ids(path): """ load file of ids to list """ with open(path) as f: return [int(line.strip()) for line in f]
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def second_to_human(time_in_sec):#{{{ """ Returns a humanized string given the time in seconds The output rounds up to days, hours, minutes, or seconds. 4 days 5 hours returns '4 days 5 hours' 0 days 4 hours 3 minutes returns '4 hours 3 mins', etc... """ days = int(time_in_sec)/3600/24 ...
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import warnings def is_equal(v1, v2): """ Function for basic comparison compare. Parameters ---------- v1: Any first value v2: Any second value Returns ------- result : bool Returns ``True`` if ``v1`` and ``v2`` are equivalent. If an exception is r...
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def rows_to_dict( rows, main_key_position=0, null_value="delete", header_line=0, contains_open_ends=False, ): """ Convert a row of rows (e.g. csv) to dictionary Parameters ---------- rows : list the row based data to convert to `dict` main_key_position : int, optiona...
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def trimHighscores(arr): """Returns 5 greatest scores from 'arr'.""" arr = sorted(arr, key=lambda record: -int(record[1])) return arr[:5]
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def moeda(preco=0, moeda="R$"): """ -> Faz a formatação de um determinado preço. :param preco: o preço a ser formatado. :param moeda: determina o formato a ser aplicado. :return: o valor formato """ return f'{moeda} {preco:.2f}'.replace('.', ',')
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def set_transformer_in_out(transformer, inputCol, outputCol): """Set input and output column(s) of a transformer instance.""" transformer = transformer.copy() try: transformer.setInputCol(inputCol) except AttributeError: try: transformer.setInputCols([inputCol]) excep...
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def join_bpe(lst:list, s:str): """Join words together that are prefaced with '##'. To be used with `reduce` """ if s[:2] == "##": # How to handle situation where first term is double hashed? base = lst.pop() # Remove from last position new_term = base + s.strip("#") return lst +...
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def convert_date(date): """ Converts the date from the DD/MM/YYYY format to YYYY-MM-DD >>> convert_date("13/04/2018") '2018-04-13' """ tokens = date.split("/") return f"{tokens[2]}-{tokens[1]}-{tokens[0]}"
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import functools import logging import time def RetryOnException(exc_type, retries): """Decorator to retry running a function if an exception is raised. Implements exponential backoff to wait between each retry attempt, starting with 1 second. Note: the default number of retries is defined on the decorator,...
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import csv def read_csv(csv_path): """Assume that csv file is formatted as: name1,label1 name2,label2 ... """ with open(csv_path) as to_read: csv_reader = csv.reader(to_read) ret_list = [(name, int(label)) for name, label in csv_reader] return ret_list
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from typing import Any from typing import Set def get_all_subclasses(cls: Any) -> Set[Any]: """Get all subclasses of the given class.""" return set(cls.__subclasses__()).union( [s for c in cls.__subclasses__() for s in get_all_subclasses(c)])
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def gcd(x: int, y: int) -> int: """Greatest common divisor.""" while x % y != 0: r = x % y x = y y = r return abs(y)
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def _resnames_match(resnames, allowed_resnames): """ Return true if one element in resnames matches one element in allowed_resnames. Parameters ---------- resnames: `abc.iterable` allowed_resnames: `abc.iterable` """ for resname in resnames: if resname in allowed_resnames: ...
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def is_pandigital(x): """ Checks if x contains all digits between 1 and 9 (inclusive) exactly once """ digits = [int(i) for i in str(x)] digits.sort() return(digits == list(range(1, 10)))
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def __edge_exists__(i, j, g): """ Checks if the edge i --> j exists in the graph, g. :param i: Index of a node. :param j: Index of a node. :param g: Graph. :return: A boolean indicating if j is a successor of i. """ return j in list(g.successors(i))
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def iteritems(d): """Python 2, 3 compatibility.""" try: return d.items() except AttributeError: return d.iteritems()
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from typing import Callable from typing import Dict import uuid def _guid_replacer() -> Callable[[str], str]: """ Closure for replace_guid. Returns ------- Callable[[str], str] replace_guid function """ guid_map: Dict[str, str] = {} def _replace_guid(guid: str) -> str: ...
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def query_phantom(view, pid): """Query phantom.""" return view.query_phantom(pid)
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from pathlib import Path def filename(filepath): """Returns the filename at the end of filepath. Args: filepath (str): A path to a file Returns: str: The filename """ return Path(filepath).name
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def clean_labels(_labels, keep=1): """An input list of string numeric labels is split and casted to int Args: _labels (list): List of strings to be processed keep (int, optional): [description]. Defaults to 1. Tells the function if either the labels or the value is to be kept R...
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def getTypesWithName(types, names): """function returns all types that have a specific name Keyword arguments: types -- list of model.Type instances names -- list of strings with names """ typesWithName = [] for type in types: for name in names: if type.name == name: ...
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def getCenter(x, y, blockSize): """ Determines center of a block with x, y as top left corner coordinates and blockSize as blockSize :return: x, y coordinates of center of a block """ return (int(x + blockSize/2), int(y + blockSize/2))
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import csv def read_objects_csv(filename): """Takes a CSV with headings and converts each row to a dict. Useful for populating create_network() :param filename: Full filename of the CSV :type filename: str :return: A list of dicts, each dict is a row from the CSV, with the heading as key and column a...
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def threshold(pred, param): """ Takes the predicted image "pred", thresholds it with the determined param, returns binary image. Parameters ---------- pred : np.array Prediction image param : float Threshold for the input image Returns ------- np.ndarray ...
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from functools import reduce def PostUploadHook(cl, change, output_api): """git cl upload will call this hook after the issue is created/modified. This will add extra trybot coverage for non-default Android architectures that have a history of breaking with Seccomp changes. """ def affects_seccomp(f): ...
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async def read_until(socket, messages): """ Reads from socket until all messages from the list are received Returns the list of messages read """ messages = messages.copy() res = [] while messages: data = await socket.receive_json() res += [data] if data in messages: ...
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def _DefaultRunnable(test_runner): """A default runnable for a PythonTestRunner. Args: test_runner: A PythonTestRunner which will run tests. Returns: The test results. """ return test_runner.RunTests()
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def rekey_dict(d, key_map): """ Renames the keys in `d` based on `key_map`. `d` is a dictionary whose keys are a superset of the keys in `key_map`. `key_map` is a dictionary whose keys match at least some of the keys in `d` and whose values are the new key names for `d`. For example: ...
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def markdown_paragraph(text: str) -> str: """Return the text as Markdown paragraph.""" return f"\n{text}\n\n"
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from torch.nn.modules.instancenorm import _InstanceNorm from torch.nn.modules.batchnorm import _BatchNorm from torch.nn import GroupNorm, LayerNorm def assert_is_norm_layer(module) -> bool: """Check if the module is a norm layer. Args: module (nn.Module): The module to be checked. Returns: ...
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import six def is_integer(obj): """Helper to determine if the provided ``obj`` is an integer type or not""" # DEV: We have to make sure it is an integer and not a boolean # >>> type(True) # <class 'bool'> # >>> isinstance(True, int) # True return isinstance(obj, six.integer_types) and not ...
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def confirm(msg): """Simple confirmation through user input msg(str): Message expecting a yes or no answer Returns True if answer is "yes" and False otherwise. """ question = f'{msg} (y/n) ' answer = '' while answer not in ('y', 'n'): answer = input(question).lower() return answ...
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def MakePartition(block_dev, part): """Helper function to build Linux device path for storage partition.""" return '%s%s%s' % (block_dev, 'p' if block_dev[-1].isdigit() else '', part)
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def apl_singleton(ip: str) -> str: """ Convert a single IP or net/mask to APL item form """ try: ind = ip.find(":") # IPv6? except Exception: ind = -1 if ind >= 0: prefix = "2:" else: prefix = "1:" try: ind = ip.index("/") # mask included? ex...
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def getDigit(num, n, base=10): """ return nth least-significant digit of integer num (n=0 returns ones place) in specified base """ return int(num / base**n) % base
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import requests def query_bulk_games_endpoint(username, year, month): """ Get data from the chess.com bulk game API endpoint. Args: username (str): A valid chess.com username. year (str): Year in a YYYY format. month (str): Month in a MM format. Returns: requests.resp...
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def cols_by_type(df, dtype): """ Return all column names in `df` with data type `dtype` """ return [col for col, dtype in zip(df.columns, df.dtypes) if dtype == dtype]
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def ceilsius_to_kelvin(t: float) -> float: """Converts the temperature from Ceilsius to Kelvin Args: t (float): Air temperatue [°C]. Returns: float: Air temperature [K]. """ t += 273.16 return t
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import struct def _pack_uint32(val): """ Integer to 32-bit little-end bytes """ return struct.pack("<I", val)
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def indent(s, indentation=" "): """ helper function to indent text @param s the text (a string) @param indentation the desired indentation @return indented text """ return [indentation + _ for _ in s]
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def insert(base_seq, positions, sub_seq): """ Inserts a subsequence into a base sequence """ new_seq = list(base_seq) for i, p in enumerate(positions): new_seq[p-1] = sub_seq[i] return "".join(new_seq)
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import json def open_file(file: str) -> dict: """Open the file, if present, if not, return an empty dict.""" try: with open(file) as f: return json.load(f) except FileNotFoundError: return {}
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def get_node_text(nodes): """Recursively read text from a node tree.""" text = [] format_tags = {"literal": "`", "strong": "**", "emphasis": "*"} for node in nodes: # Handle inline formatting elements. if node.nodeType == node.ELEMENT_NODE and node.tagName in format_tags: wra...
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def normalized(z): """Returns the complex number with the same argument/phase but with a magnitude of 1.""" try: return z/abs(z) except ZeroDivisionError: raise ZeroDivisionError("Cannot normalize 0.")
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def hamming(list_sequences): """Compute Hamming distance of two DNA strings""" string_a, string_b = list_sequences hamm = 0 for nt_a, nt_b in list(zip(string_a, string_b)): if nt_a != nt_b: hamm += 1 return hamm
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def reformat_acs_vars(col): """Convert variable names to the same format used by the Census Detailed Tables API. See <https://api.census.gov/data/2019/acs/acs5/variables.html> for variable descriptions Parameters ---------- col : str column name to adjust Returns ------- str ...
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from typing import Union from datetime import datetime def _new_name(seq_type: str) -> Union[str, None]: """ Creates a new file name based on the sequence type. """ tstamp = datetime.now().strftime("%Y_%m_%d-%I-%M-%S_%p") if seq_type.lower() == "dna": return f"dna_sequence_{tstamp}.txt"...
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def parse_and_validate_latitude(request): """Extract and Check the validity of latitude. Args: request: HTTP request. Returns: latitude(float) if valid. Raises: ValueError: if latitude is not float, or outside range [-90, 90]. """ lat = float(request.rel_url.query.get(...
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def get_key(my_dict, val): """ This function finds the key of a value in a dictionary. :param my_dict: The dictionary object to look for key :param val: the value of the target key :return: the first target key corresponding to the given value or string saying "key doesn't exist" ""...
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from typing import Optional from pathlib import Path def find_user_library() -> Optional[Path]: """Attempts to retrieve the path to the user's default music library folder.""" expected_path = Path('~/Music').expanduser() if expected_path.exists(): return expected_path
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def translate_key(key): """ Function to return the correct configuration key. If not found return the key itself. Returns a string. """ mapping = { 'user': 'User', 'identityfile': 'IdentityFile', 'proxycommand': 'ProxyCommand', 'ip': 'Hostname', ...
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import hashlib def file_md5(file_content): """Checksum of content.""" m = hashlib.md5() m.update(file_content) return str(m.hexdigest())
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def get_target_ids(node_field_values): """Get the target IDs of all entities in a field. """ target_ids = [] for target in node_field_values: target_ids.append(target['target_id']) return target_ids
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def match_rules(txt, rules): """Find rule that first matches in txt""" # Find first begin tag first_begin_loc = 10e100 matching_rule = None for rule in rules: begin_tag, end_tag, func = rule loc = txt.find(begin_tag) if loc > -1 and loc < first_begin_loc: first_be...
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def get_embedding(word, model): """ Method to get embedding of given word parameters ----------- :param word: str :param model: object Word embedding model :return: vector """ if word in model.wv.vocab: return model.wv[word] else: raise KeyError
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def estimate_evacuate_timeout(session, host): """ Rough estimation of the evacuate uplimit based on live VMs memory """ mref = session.xenapi.host.get_metrics(host) metrics = session.xenapi.host_metrics.get_record(mref) memory_used = int(metrics['memory_total']) - int(metrics['memory_free']) # Conse...
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def parse_group_name(group_name): """ Return an ((int, int), prefix) tuple from group name. Expects group to be in the form {prefix}/{x}_{y} raises ValueError if group_name is not in the expected format. """ idx = group_name.rfind('/') if idx < 0: raise ValueError('Bad group n...
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import json def getConfig(configFileName='config.json'): """Reads config from file Parameters ---------- configFileName: str name of the file to be readed Returns ------- json: dict data structure defining parameters describing application and stored externally """ ...
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def get_ca_id_from_ref(ca_ref): """Parse a ca_ref and return the CA ID :param ca_ref: HHTO reference of the CA :return: a string containing the ID of the CA """ ca_id = ca_ref.rsplit('/', 1)[1] return ca_id
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def cache_master_key(config): """Create a string determined by any cache-invalidating config elements.""" return ( "str{use_string}_" "vocab{vocab_size}_" "pg{use_page}_" "geom{use_geom}_" "amt{use_amount}_" "pad{pad_windows}_" "len{window_len}" ).form...
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def clean_multiple_coordsets(protein): """ Deletes all but the first coordinate set of a protein. """ if len(protein.getCoordsets()) > 1: for i in range(len(protein.getCoordsets())): if i == 0: pass else: protein.delCoordset(-1) return ...
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def hash_series(series): """Fast series hash""" # hash(series.to_string()) # 112 ms # hash(tuple(series.items())) # 2.24 ms # hash((tuple(series.values), tuple(series.index.values))) # 1.77 ms # chosen solution: 82.3 µs return hash(( hash(series.index.values.data.tobytes(...
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def format_string(x: int, frame: str) -> str: """Helper function to format individual time frames. :param x: Integer :param frame: Time frame :return: Formatted time string """ return '' if x == 0 else f' {x} {frame} ' if x == 1 else f' {x} {frame}s '
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import time def datetime_to_seconds_since_epoch(dt): """Converts a Python datetime to seconds since the epoch.""" return time.mktime(dt.timetuple())
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def luma(col): """Calculates ITU-R 601-2 luma value for a given RGB color. This is the same formula used by `PIL.Image.Image.convert` when converting RGB to L.""" r, g, b = col return r * 299/1000 + g * 587/1000 + b * 114/1000
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def build_ranking(teams): """ Assigns rankings to the teams based on their winrates. If teams are tied, they will be assigned the same ranking as each other. :param teams: A list of teams, where each element is a list containing a team's name and winrate (among potentially other data). This lis...
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def net_income(ebt, tax): """ Computes net income. Parameters ---------- ebt : int or float Earnings before tax tax : int or float Tax expense Returns ------- out : int or float Net income """ return ebt - tax
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def sanity_check_iob(naive_tokens, tag_texts): """ Check if the IOB tags are valid. * Args: naive_tokens: tokens split by .split() tag_texts: list of tags in IOB format """ def prefix(tag): if tag == "O": return tag return tag.split("-")[0] def body(...
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def rank_permutation(r, n): """Given r and n find the permutation of {0,..,n-1} with rank according to lexicographical order equal to r :param r n: integers with 0 ≤ r < n! :returns: permutation p as a list of n integers :beware: computation with big numbers :complexity: `O(n^2)` ""...
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def isclassattr(a, cls): """ Test if an attribute is a class attribute. """ for c in cls.__mro__: if a in c.__dict__: return True return False
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def list_s3_keys_in_bucket(s3client, bucket, prefix=''): """ Returns a list of the keys situated at the given prefix in the given bucket :s3client: boto3.session.Session.client that represents a connection with s3 :bucket: string representing the s3...
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def split_name(a_name): """ If only one word given, return it as last. If more than two words given, return all but last as first. examples = { 'ok simple': ('ok', 'simple'), 'solo': ('', 'solo'), 'three part name': ('three part', 'name'), 'name with-hyphen': ('name', 'wi...
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def fitsum(list): """Sum of fitnesses in the list, needed to build wheel of fortune.""" sum=0.0 for i in range(0,len(list)): sum+=list[i] return sum
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from datetime import datetime def get_timestamp_id(year: bool = True, month: bool = True, date: datetime = datetime.utcnow()) -> str: """ Returns timestamp id (tp_id) in format '2021-01', '2021' or '01'. """ if not year: return date.strftime('%m') elif not month: return date.strfti...
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def _select_best_indel(indels): """Select the highest quality indel, based on the quality, prefering low earlier positions above later positions in case of ties.""" def _indel_by_quality_and_position(indel): # The negative position is used to select the first # of equally quality indels ...
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def temporal_affine_backward(dout, cache): """ Backward pass for temporal affine layer. Input: - dout: Upstream gradients of shape (N, T, M) - cache: Values from forward pass Returns a tuple of: - dx: Gradient of input, of shape (N, T, D) - dw: Gradient of weights, of shape (D, M) ...
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from typing import Tuple from typing import List from typing import Dict def selection(triple: Tuple[str, str, str], variables: List[str]) -> Dict[str, str]: """Apply a selection on a RDF triple, producing a set of solution mappings. Args: * triple: RDF triple on which the selection is applied. *...
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import re def parse_firewall_rule(rule_str): """ Transforms a string of multiple inputes to a dictionary list parameter: (string) rules A firewall rule in the specified project Return firewall rules as dictionary list """ rules = [] regex = re.compile(r'ipprotocol=([\w\d_:.-]+),por...
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def recvall(sock, size: int): """Receive data of a specific size from socket. If 'size' number of bytes are not received, None is returned. """ buf = b"" while size: newbuf = sock.recv(size) if not newbuf: return None buf += newbuf size -= len(newbuf) ...
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def is_IPv4(ip_string): """Returns true if the string is an IPv4: 4 digits < 255, separated by dots""" digit_list = ip_string.split(".") if len(digit_list) != 4: return False for d in digit_list: if int(d) > 255: return False return True
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def extractValue(indexString, content): """ Extracts an integer value after the indexString from the given content. Searched for the given string, then moves over that string + 1 pos (new line), then reads the numbers until a '<' is found indexString - The string to search for. content - T...
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import time def wait_for_ego_vehicle(world): """Loops until a hero vehicle is spawned. Note: The loop ticks the simulation. """ # Connect to the ego-vehicle spawned by the scenario runner. while True: time.sleep(1) possible_actors = world.get_actors().filter('vehicle.*') f...
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def parse_context_table_records_list(records_list: list, fmt: str, is_delete: bool = False): """ Parses records list given as an argument in context tables management commands. Args: records_list: The list of records fmt: The format of each record, e.g. id:key:value is_delete: Whether o...
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def thr_half(tensor): """Get the middle between min/max over batch dimension.""" m = tensor.min(0, keepdim=True).values M = tensor.max(0, keepdim=True).values return m, (M - m) / 2.0
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def _get_all_shortcuts(directories): """ Args: directories (deque of str objects): All directories up to but excluding the function folder Returns: list: All possible shortcuts to the mcfunction path str: The mcfunction path as specified by minecraft Examples: >>> i = I...
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def quote_path(path: str) -> str: """ Quote a file path if it contains whitespace. """ if " " in path or "\t" in path: return f'"{path}"' else: return path
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import re def remove_comments(tex_source): """Delete latex comments from TeX source. Parameters ---------- tex_source : str TeX source content. Returns ------- tex_source : str TeX source without comments. """ # Expression via http://stackoverflow.com/a/13365453 ...
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from datetime import datetime import pytz def from_unixtime(unixtime_, timezone_="UTC"): """ Convert a unixtime int, *unixtime_*, into python datetime object Parameters ---------- `unixtime_` : int Unixtime i.e. seconds since epoch `timezone_` : string The timezone of the outp...
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def add_dimention(tensor): """[Function that allows a single tensor to be processed by the neural networks that use Sequential function] Args: tensor ([type]): [single tensor whitout the batch dimention] Returns: tensor[type]: [returns a tensor with extra dimention so it can be prosseced by Sequential in pytor...
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def get_number_rows(ai_settings, ship_height, alien_height): """calculate how many row can the screen hold""" available_space_y = ai_settings.screen_height-3*alien_height-ship_height number_rows = int(available_space_y/(2*alien_height)) return number_rows
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def valid_pt(pt, shape): """ Determine if a point (indices) is valid for a given shaped """ for i, j in zip(pt, shape): if i < 0: # index is not negative return False if i >= j: # index is less than j return False return True
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