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import calendar def month_name(month_number): """ Returns the full name of a month based on the integer order. Straight from http://stackoverflow.com/a/7385976/122291 """ return calendar.month_name[month_number]
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def has_gaps(gaps): """Returns True if gaps dictionary has gaps in it. Parameters ---------- gaps: dictionary Dictionary of Channel:gaps arrays """ for channel in gaps: if len(gaps[channel]): return True return False
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def strip_unexecutable(lines): """Remove all code that we can't execute""" valid = [] for l in lines: if l.startswith("get_ipython"): continue valid.append(l) return valid
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def update_dictionary(default_dict, overwrite_dict=None, allow_unknown_keys=True): """Adds default key-value pairs to items in ``overwrite_dict``. Merges the items in ``default_dict`` and ``overwrite_dict``, preferring ``overwrite_dict`` if there are conflicts. Parameters ---------- default_di...
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def conventional_naming(st: str, is_package=True) -> str: """If st is not a package name then conventional_naming treats it as a project name. Parameters ---------- st : str Underscores are allowed. No spaces are allowed. is_package : bool, optional Considered project if not pac...
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import pathlib def lstat(path: str): """Gets stat of path `path` (handles links) e.g j.sals.fs.lstat("/home/rafy/testing_link") -> os.stat_result(st_mode=41471, st_ino=7081257, st_dev=2049, st_nlink=1, st_uid=1000, st_gid=1000, st_size=16, st_atime=1586445737, st_mtime=1586445734, st_ctime=158644573...
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def translate_aws_action_groups(groups): """ Problem - AWS provides the following five groups: - Permissions - ReadWrite - ListOnly - ReadOnly - Tagging The meaning of these groups was not immediately obvious to me. Permissions: ability to modify (create...
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def GenerateSwitchStatement(codepoint_list, var_name, num_indent, return_type): """Generates a switch-case statement for given arguments. This method generates a switch-case statement, which checks if the value of the given 'var_name' variable is in 'codepoint_list' and returns 'return_type' if contained. T...
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def process_row( row, value_col ): """ Looks at a processed CSV row returning the date, time and then value of the specified column. """ date_time = row[3].split('T') # [:5] so that we just get hh:mm return (date_time[0], date_time[1][:5], row[value_col])
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def gfile(self, size="", **kwargs): """Specifies the pixel resolution on Z-buffered graphics files. APDL Command: /GFILE Parameters ---------- size Pixel resolution. Defaults to a pixel resolution of 800. Valid values are from 256 to 2400. Notes ----- Defines the pix...
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from typing import Any def is_number(obj: Any) -> bool: """ Test if the JSON object is a JSON number Args: obj: object to test the type of Returns: `True` if ``obj`` is a json number, `False` otherwise """ return type(obj) in (int, float)
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def split(df, target): """Split off target col to make X and y""" if not isinstance(target, list): target = [target] return df.drop(columns=target), df[target].values.ravel()
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def week_cal(cal: str, current_day: int) -> str: """Function used to transform a HTML month calendar into a week calendar. Args: `cal`(str): the html calendar to transform. `current_day`(int): the current day to select the current week. Returns: `str`: the calendar transformed. ...
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def plot_identifier(name, plot_id): """Return file,plot_id identifier.""" prefix, number = name.split("_") return "{}-{}".format(number, plot_id)
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import torch def precreate_targ_mask_encoding(nintervals): """Precreate 1 + 2*nintervals different target/mask encodings (depending whether item is a boundary, or whether each interval is censored or not). """ nencodes = 1 + nintervals * 2 targ_tensor = torch.zeros(nencodes, nintervals) m...
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def file_contains(path, text): """Does the file at path contain text?""" with open(path) as stream: for line in stream: if text in line: return True return False
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def energy_balance_rule(mod, p, h): """ **Constraint Name**: DR_Energy_Balance_Constraint **Enforced Over**: DR_OPR_HRZS The sum of all shifted load up is equal to the sum of all shifted load down within an horizon, i.e. there are no energy losses or gains. """ return sum(mod.DR_Shift_Up_MW...
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import binascii def unhexlify(blob): """ Takes a hexlified script and turns it back into a string of Python code. """ lines = blob.split('\n')[1:] output = [] for line in lines: # Discard the address, length etc. and reverse the hexlification output.append(binascii.unhexlify(li...
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def null_count(df) -> int: """ Get the total number of nulls in a dataframe :param df: the pandas DataFrame to inspect :returns: The total number of nulls as an int """ return df.isna().sum().sum()
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import re def extract_request(message, slack_id): """Extract request from the message. Keywoard arguments: message -- user's message slack_id -- bot slack id """ request = message.replace("{} ".format(slack_id), "").strip() request = re.sub(" +", " ", request) return request
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from typing import Any from typing import List def ensure_list(item: Any) -> List: """Ensure string is converted to a Path. Args: item (Any): Anything. Returns: The item inside a list if it is not already a list. """ if not isinstance(item, list): item = [item] return...
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def getOrElseUpdate(dictionary, key, opr): """If given key is already in the dictionary, returns associated value. Otherwise compute the value with opr, update the dictionary and return it. None dictionary are ignored. >>> d = dict() >>> getOrElseUpdate(d, 1, lambda _: _ + 1) 2 >>> print(d) {...
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def where_am_i(cmd_line, word_before_cursor): """ Tells the autocomplete which word it is completing. It requires a little extra care because we want to differentiate when a space is pressed. :param cmd_line: the list of command line words :param word_before_cursor: word_before_cursor parsed from th...
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def sorensen(s1,s2) -> float: """ Sorensen similarity. Parameters ---------- s1 : first set. s2 : second set. Returns ------- similarity coefficient (0<=x<=1). """ return 2*len(s1&s2)/(len(s1)+len(s2))
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def count_sdf_mols(file_path): """ This function returns the number of molecules in an sdf-file. Parameters ---------- file_path : str Full path to sdf file. Returns ------- counter : int Number of molecules. """ print('Counting molecules in {}...'.format(file_...
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def create_nine_digit_product(num): """ Create a nine digit string resulting from the concatenation of the product from num and multipliers (1, 2, 3,).... Return 0 if string cannot be length 9. """ result = '' counter = 1 while len(result) < 9: result += str(num * counter) ...
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def get_mission_area(label): """ Search a PDS4 label for a Mission_Area. Parameters ---------- label : Label or ElementTree Element Full label for a PDS4 product with-in which to look for a mission area. Returns ------- Label, ElementTree Element or None Found Mission_Area ...
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def get_layer_info(layer): """ Extracts information that makes up the layer, as well as its weights and bias. """ hyperparameters = dict() parameters = dict() # Convolutional layer if str(layer).split('(')[0] == 'Conv2d': hyperparameters['in_channels'] = layer.in_channels ...
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def labels_name(labels): """Returns a comma-separate list of label names Args: labels: list of label objects. Returns: string with comma-separated labels names. """ if type(labels) is list: return ','.join([ l['name'] for l in labels ]) else: return labels['name']
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from typing import Counter import re def build_wordlist(input_file): """Build a wordlist Counter from lines of the corpus file""" wordlist = Counter() for line in input_file: words = re.findall(r'\w+', line) wordlist.update(words) return wordlist
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def get_instrument(program): """Return the instrument inferred from the program number.""" if 0 <= program < 8: return "Piano" if 24 <= program < 32: return "Guitar" if 32 <= program < 40: return "Bass" if 40 <= program < 46 or 48 <= program < 52: return "Strings" ...
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def groupms_byenergy(microstates, ticks): """ This function takes in a list of microstates and a list of energy numbers (N values), divide the microstates into N bands by using the energy number as lower boundaries. The list of energy will be sorted from small to large. """ N = len(ticks) ticks....
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def get_snapshot_name(publish_name, dist, temporary=False): """ Returns a aptly snapshot name Args: dist (str): The distribution to be used (stable, unstable) temporary (bool): use tempporary extension """ return "{}-{}{}".format(publish_name, dist, "-tmp" if tempora...
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def counter(listy): """ Input: A list of numbers. Output: The number of entries in the list, interation. """ counter = 0 for i in listy: counter += 1 return counter
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from typing import Dict from typing import List from typing import Tuple def _is_explanation_equal(dict1: Dict[str, List[Tuple[str, float]]], dict2: Dict[str, List[Tuple[str, float]]]) -> bool: """ Tests if the two dictionaries of a given structure are equal. The both of the inp...
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import asyncio async def stop_exposure_after(command, delay: float): """Waits ``delay`` before closing the shutter.""" command.info(text="dark exposing . . .") await asyncio.sleep(delay) return True
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def set_intersection(*sets): """Return the intersection of all the given sets. As of Python 2.6 you can write ``set.intersection(*sets)``. Examples ======== >>> from sympy.core.compatibility import set_intersection >>> set_intersection(set([1, 2]), set([2, 3])) set([2]) >>> set_inters...
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import math def squared_loss(y, y_hat): """ squared loss function :param y: :type numpy vector: label :param y_hat: :type numpy vector: observation :return: :type float: loss """ loss = 0 for i in range(len(y)): loss += math.pow(sum(y[i] - y_hat[i]), 2)/2 return float(loss)
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def compute_center(detections): """Compute the center for each detection. Args: detections: A matrix of shape N * 4, recording the pixel coordinate of each detection bounding box (inclusive). Returns: center: A matrix of shape N I 2, representing the (x, y) coordinate ...
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import hashlib def checksum(filename, hash_factory=hashlib.md5, chunk_num_blocks=128): """ Read file and produce md5 hash of contents as string. :param filename: file name :param hash_factory: factory for producing hash :param chunk_num_blocks: number of blocks, factor of 128 :return: str md5...
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def _default_metric_compare_fn(last_metrics, new_metrics): """Compare two metrics Args: last_metrics: previous metrics. A comparable object. new_metrics: new metrics. A comparable object. Returns: True if new_metrics is equal to or better than the last_metrics. False, o...
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def selection_sort(li): """ [list of int] => [list of int] Selection sort: finds the minimum value, swaps it with the value in the first position, and repeats these steps for the remainder of the list. """ sorted_list = li # iterate as many times as the list is long for i in range(len(...
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def _clock_to_mjd( clock_seconds ): """ Helper function which converts clock time in seconds to MJD in days """ # Modified Julian date of the "zero epoch" of the system clock (1/1/70) MJD_ZEROPOINT = 40587.0 # Number of seconds per day. SECONDS_PER_DAY = 86400.0 mjd_days = MJD_...
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from typing import Tuple from pathlib import Path def check_path_params(paths: Tuple) -> bool: """Checks if all paths in 'paths' exist.""" for path in paths: if not Path(path).is_dir(): print(f"Path does not exist: {path}") return False return True
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import re def _image_name_from_url(url): """ Create a nice image name from the url. """ find = r'https?://|[^\w]' replace = '_' return re.sub(find, replace, url).strip('_')
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def write_clusters(filehandle, clusters, max_clusters=None, min_size=1, header=None, rename=True): """Writes clusters to an open filehandle. Inputs: filehandle: An open filehandle that can be written to clusters: An iterator generated by function `clusters` or a dict max_clusters: Stop p...
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def _compute_position(input, index): """Compute line/column position given an index in a string.""" line = 1 col = 1 eol = None # last end of line character for c in input[:index]: if c == '\n' or c == '\r': if eol is None or eol == c: eol = c lin...
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def flatten_beam_dim(x): """Flattens the first two dimensions of a non-scalar array.""" if x.ndim == 0: # ignore scalars (e.g. cache index) return x return x.reshape((x.shape[0] * x.shape[1],) + x.shape[2:])
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def close(conn): """This closes the database connection. """ try: conn.close() except: pass return True
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import requests def check_product_existence(p_id): """ Função para verificar a existencia do produto na API externa do LuizaLabs :param p_id: id único do produto :return: bool: True caso exista, se não False """ url = "http://challenge-api.luizalabs.com/api/product/{}" response = requests...
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def translate_bbox(bbox, y_offset=0, x_offset=0): """Translate bounding boxes: (0, 0) to (y_{offset}, x_{offset}). bbox (~numpy.ndarray): see before y_offset (int or float): The offset along y axis. x_offset (int or float): The offset along x axis. Return : ~numpy.ndarray: """ out_bbox = bbo...
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def sequence_delta(previous_sequence, next_sequence): """ Check the number of items between two sequence numbers. """ if previous_sequence is None: return 0 delta = next_sequence - (previous_sequence + 1) return delta & 0xFFFFFFFF
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from typing import List def add_line_continuation_characters(command_tokens: List[str]) -> List[str]: """ Add a \\ to the end of each command token that precedes an argument token (starting with -) """ command_tokens = list(command_tokens) # make a copy for i, token in enumerate(command_tokens):...
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def horner (x, ai) : """Value of polynomial `a0 + a1 * x + a2 * x**2 + ... an * x ** n` for `x`. >>> horner (3, (-1, 2, -6, 2)) 5 >>> horner (-3, [8, -1, 0, 13, 4]) -16 """ ia = reversed (ai) result = next (ia) for a in ia : result *= x result += ...
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def remove_padding(data): """Remove the padding of the plain text (it assumes there is padding)""" pad_len = ord(data[-1]) return data[:-pad_len]
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def parse_keyids(key): """Return parsed keyid string(s) or tuple of.""" if isinstance(key, str): return key elif isinstance(key, (tuple, list)): return tuple(parse_keyids(keyid) for keyid in key) return getattr(key, "keyid")
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def rm_eol(line, /): """Return line with end of line removed""" return line.rstrip("\n\r")
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from pathlib import Path def corpus_file(path): """ Get a data file from a standard location. Check a few possible locations until the file is found. """ my_location = Path(__file__).parent root_location = my_location.parent nfs_location = Path('/nfs/mg-cache/language_id/corpus') paths...
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def imgtype2ext(typ): """Converts an image type given by imghdr.what() to a file extension.""" if typ == 'jpeg': return 'jpg' if typ is None: raise Exception('Cannot detect image type') return typ
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def filter_not_empty_values(value): """Returns a list of non empty values or None""" if not value: return None data = [x for x in value if x] if not data: return None return data
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from typing import Tuple def format_addr(addr: Tuple[str, int]) -> str: """ Format an address from a (host, port) tuple :param addr: the address tuple to format :return: a string representing address as "host:port" """ return ":".join(map(str, addr))
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def pkcs7_pad(data, block_size=16): """Calculate and append pkcs7 padding. Block size can be defined dynamically.""" last_block = data[block_size*(len(data)/block_size):] if not last_block: return data + chr(block_size)*block_size rem = block_size - len(last_block) return data + chr(rem)*rem
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def time_to_secs(t): """Convert a datetime.time object to seconds""" return t.hour*3600 + t.minute*60 + t.second
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def _return_arg(__arg: ..., /) -> ...: """Return the singular positional argument unchanged.""" return __arg
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def split_line(line, min_line_length=30, max_line_length=100): """ This is designed to work with prettified output from Beautiful Soup which indents with a single space. :param line: The line to split :param min_line_length: The minimum desired line length :param max_line_length: The maximum desire...
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import json def get_workcell_io_json() -> str: """Return a test workcell_io.json.""" workcell_io = { "Proto": ("ChoKBnZhY3V1bRoCdXIoAjoKEghzdGFuZGFyZAodCgdibG93b2ZmGgJ1cigC" "OgwSCHN0YW5kYXJkIAEKSwoNdmFjb2ZmLWJsb3dvbhoCdXIoAjABOhgKCnZh" "Y3V1bS1vZmYSCHN0YW5kYXJkGAE6GAoKYmxvd2...
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def protein_sp_cterm(protein, drange): """ Return protein sequence with SP placed at end """ sp_start, sp_end = drange.split("-") return protein[int(sp_end):] + protein[:int(sp_end)]
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def segments_intersect(s1, s2): """ Return *True* if *s1* and *s2* intersect. *s1* and *s2* are defined as:: s1: (x1, y1), (x2, y2) s2: (x3, y3), (x4, y4) """ (x1, y1), (x2, y2) = s1 (x3, y3), (x4, y4) = s2 den = ((y4-y3) * (x2-x1)) - ((x4-x3)*(y2-y1)) n1 = ((x4-x3) * (y1-...
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import re def clean_review(text: str): """ Removes a set of special characters from the review text for the sake of dependency parsing. Parameters: text (str): Review text. Returns: str: Cleaned review text. """ return re.sub(r'[$%+^&@#*]+', r'', text)
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def probability_string(probability: float) -> str: """ Converts a probability to a string. """ return f"{probability:.2f}".replace("0.", "0,").replace("0,0", "0,0")
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def get_all_indexes_of(value, iterable): """ Return all indexes for a value. """ # Convert the given object to a list. iterable = list(iterable) index_list = [] # Get each index and store them in the list of indexes. for index in range(len(iterable)): if value in iterable[inde...
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def parse_float(a): """ Converts to a float value; raise TypeError. """ try: res = float(a) return res except: msg = 'Cannot convert value to a float.\nValue: %s' % a.__repr__() raise TypeError(msg)
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def walk(f, d, num_steps): """Assumes: f a Field, d a Drunk in f, and num_steps an int >= 0. Moves d num_steps times; returns the distance between the final location and the location at the start of the walk.""" start = f.get_loc(d) for s in range(num_steps): f.move_drunk(d) retur...
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import re def get_tagged_functions_in_file(filename): """Given a filename, return a set of the target function names tagged with @coverage in that file.""" token_regex = r"^.*@coverage(( (\w+))+).*$" token_pattern = re.compile(token_regex, re.IGNORECASE) cov_functions = set() line = "" w...
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def strip_preparer(value): """Colander preparer that trims whitespace around argument *value*.""" if isinstance(value, str): return value.strip() else: return value
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from typing import Dict from typing import Any def _find_host_port(ports: Dict[str, Any], container_port: int) -> str: """Find host port from container port mappings. `ports` is a nested dictionary of the following structure: {'8500/tcp': [{'HostIp': '0.0.0.0', 'HostPort': '32769'}], '8501/tcp': [{'HostIp'...
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def get_policies(key, service_account): """Returns Machine Provider policies governing the given instance. Args: key: ndb.Key for a models.Instance entity. service_account: Name of the service account the instance will use to talk to Machine Provider. """ return { 'backend_attributes': { ...
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import re def validate_cron_string(cron_string, error_on_invalid=False): """ Validate that a string is a Unix cron string. """ # Note: This is also a Temporal function, but I'm trying to avoid making Temporal a dependency of BTU. crontab_time_format_regex = re.compile( r"{0}\s+{1}\s+{2}\s+{3}\s+{4}".format( ...
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def child_elem_as_str(elem,qname): """Returns the content of the child element as str.""" child = elem.find_child_element(qname) if child: return str(child.schema_actual_value) return None
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def uint64_tag(name, value): """Create a DMAP tag with uint64 data.""" return name.encode('utf-8') + \ b'\x00\x00\x00\x08' + \ value.to_bytes(8, byteorder='big')
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from typing import Callable import re def remove_link_ids() -> Callable[[str], str]: """Create function to remove link ids from rendered hyperlinks.""" def _remove_link_ids(render: str) -> str: """Remove link ids from rendered hyperlinks.""" re_link_ids = re.compile(r"id=[\d\.\-]*?;") ...
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import torch def calc_output_to_cum_min_cov( cross_covariance: torch.Tensor, prob_is_min: torch.Tensor, ) -> torch.Tensor: """ Given two sets of jointly Gaussian random variables [Y_1, ..., Y_d] and [Z_1, ..., Z_m], calculate the approximate covariance between min(Y_1, ..., Y_d) and [Z_1, ..., Z_m...
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def _2DprintInxRow(inxRow, lSpacesIndR): """ Function prints one index of a row of a 2D array Input: - 1 **inxCol** (*int*) Index of the row to be printed - 2 **lSpacesIndR** (*list*) A list with spaces which should be added to indices of row...
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def _split_tag_path_pattern(tag_path_pattern): """ Returns a list of tag patterns and the prefix for a given tag path pattern. Args: tag_path_pattern (str) """ if tag_path_pattern.startswith('+/') or tag_path_pattern.startswith('*/'): prefix = tag_path_pattern[:2] tag_path_pattern = tag_pa...
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from typing import List def define_foot_vertices(robot: str) -> List: """Define the robot-specific positions of the feet vertices in the foot frame.""" if robot != "iCubV2_5": raise Exception("Feet vertices positions only defined for iCubV2_5.") # For iCubV2_5, the feet vertices are not symmetri...
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def _get_exception_key(exc_info): """ Returns unique string key for exception. Key is filename + lineno of exception raise. """ exc_tb = exc_info[2] if exc_tb is None: return repr(exc_info[1]) return "{}:{}".format(exc_tb.tb_frame.f_code.co_filename, exc_tb.t...
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def nodot(item): """Can be used to ignore hidden files, starting with the . character.""" return item[0] != '.'
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def _get_element_subnodes(tree_element): """ Get all of the sublements of the tree_element with a 'node' tag :param tree_element: Element object from the ElementTree package :return: From ElementTree documentation: "Returns a list of all matching elements in document order." """ return tre...
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import difflib def lines_diff(lines1, lines2): """Show difference between lines.""" is_diff = False diffs = list() for line in difflib.ndiff(lines1, lines2): if not is_diff and line[0] in ('+', '-'): is_diff = True diffs.append(line) return is_diff, diffs
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def if_none(value, default): """ Returns value or default if value is None. """ if (value is None): return default return value
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import torch def compute_accuracy(logits, labels, mask): """Compute the accuracy""" logits = logits[mask] labels = labels[mask] _, indices = torch.max(logits, dim=1) correct = torch.sum(indices == labels) return correct.item() * 1.0 / len(labels)
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def encode_data(data): """ Helper that converts :class:`str` or :class:`bytes` to :class:`bytes`. :class:`str` are encoded with UTF-8. """ # Expect str or bytes, return bytes. if isinstance(data, str): return data.encode('utf-8') elif isinstance(data, bytes): return data ...
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import json def load_params(file): """ Load the train config parameters. Args: file (str): path to config file Returns: out (dict): config dictionary """ with open(file, "r") as f: out = json.load(f) return out
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def is_response(event): """Check whether an event is a response indicating a message was successfully sent""" return 'reply_to' in event and 'ok' in event and event['ok']
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def basic_python_loop(n): """Runs a simple native python loop which is memory light and involves no data input or output Args: n (int): count of number of loops """ mydict = {} for i in range(n): mydict[i % 10] = i return None
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def plural_of (noun) : """Returns the plural from of the (english) `noun`. >>> print (plural_of ("house")) houses >>> print (plural_of ("address")) addresses >>> print (plural_of ("enemy")) enemies """ result = noun if result.endswith ("s") : result += "es" elif res...
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import glob def filebrowser(ext='', directory=''): """ returns files with an extension """ return [f for f in glob.glob(f"{directory}**/*{ext}", recursive=True)]
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def d_hyd(width, height): """Calculates hydraulic diameter for rectangular profiles""" return 4 * (width * height) / (2 * (width + height))
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def calc_centroid(bolts): """Calculate the centroid of the bolt group. Args: bolts (data struct): list of the bolt data structure Returns: x_centroid (float): x-coordinate of bolt group centroid y_centroid (float): y-coordinate of bolt group centroid This coordinate pa...
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import torch def make_pad_mask(lengths: torch.Tensor, le : bool = True) -> torch.Tensor: """Make mask tensor containing indices of padded part. See description of make_non_pad_mask. Args: lengths (torch.Tensor): Batch of lengths (B,). Returns: torch.Tensor: Mask tensor containing ind...
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